View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15992_low_6 (Length: 390)

Name: NF15992_low_6
Description: NF15992
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15992_low_6
NF15992_low_6
[»] chr6 (45 HSPs)
chr6 (16-375)||(14771721-14772087)
chr6 (141-343)||(20850231-20850433)
chr6 (141-372)||(21311881-21312112)
chr6 (143-375)||(3652398-3652630)
chr6 (141-374)||(2681219-2681452)
chr6 (142-343)||(23986351-23986552)
chr6 (141-375)||(6330914-6331148)
chr6 (141-373)||(20896692-20896924)
chr6 (173-343)||(27334103-27334273)
chr6 (173-343)||(27394843-27395013)
chr6 (140-333)||(2720608-2720801)
chr6 (141-375)||(2890841-2891073)
chr6 (141-375)||(11062196-11062429)
chr6 (143-374)||(17851286-17851517)
chr6 (231-375)||(17027533-17027677)
chr6 (230-375)||(7911877-7912022)
chr6 (141-374)||(20126185-20126418)
chr6 (139-375)||(17850826-17851062)
chr6 (141-303)||(3652889-3653051)
chr6 (142-374)||(23776352-23776584)
chr6 (230-372)||(7912309-7912451)
chr6 (138-375)||(33775004-33775243)
chr6 (229-343)||(9440343-9440457)
chr6 (230-375)||(13492788-13492933)
chr6 (140-343)||(21311423-21311627)
chr6 (141-375)||(15929492-15929726)
chr6 (231-343)||(13191547-13191659)
chr6 (230-334)||(17731156-17731260)
chr6 (230-375)||(16519967-16520112)
chr6 (209-341)||(31821728-31821860)
chr6 (143-343)||(15929111-15929311)
chr6 (156-372)||(20735621-20735836)
chr6 (230-320)||(9440485-9440575)
chr6 (262-352)||(9440882-9440972)
chr6 (262-351)||(32292916-32293005)
chr6 (231-375)||(9352062-9352206)
chr6 (295-375)||(13492396-13492476)
chr6 (285-341)||(28065874-28065930)
chr6 (229-375)||(12194328-12194472)
chr6 (227-372)||(17205335-17205479)
chr6 (262-339)||(28582995-28583071)
chr6 (280-375)||(1991602-1991697)
chr6 (280-343)||(20732627-20732690)
chr6 (280-316)||(9441099-9441135)
chr6 (278-341)||(3885123-3885186)
[»] chr8 (43 HSPs)
chr8 (141-375)||(10844793-10845027)
chr8 (141-375)||(22026289-22026523)
chr8 (141-375)||(27925809-27926043)
chr8 (141-375)||(32292307-32292541)
chr8 (140-375)||(8080344-8080579)
chr8 (141-343)||(22549029-22549231)
chr8 (140-375)||(12827256-12827491)
chr8 (140-343)||(41659139-41659341)
chr8 (141-375)||(6464912-6465146)
chr8 (141-343)||(22548583-22548785)
chr8 (141-375)||(28453249-28453482)
chr8 (141-374)||(33852261-33852493)
chr8 (139-341)||(27022374-27022576)
chr8 (141-343)||(28375088-28375290)
chr8 (141-375)||(22840531-22840765)
chr8 (149-343)||(27021913-27022111)
chr8 (230-374)||(34308482-34308626)
chr8 (229-375)||(10844617-10844763)
chr8 (209-375)||(2044036-2044202)
chr8 (230-375)||(25144771-25144916)
chr8 (230-375)||(34308937-34309086)
chr8 (251-375)||(12100711-12100835)
chr8 (255-371)||(41912994-41913110)
chr8 (239-373)||(17103089-17103223)
chr8 (230-375)||(21316111-21316256)
chr8 (240-341)||(22705181-22705282)
chr8 (231-372)||(25147536-25147677)
chr8 (241-375)||(25147977-25148111)
chr8 (280-375)||(3745150-3745245)
chr8 (280-343)||(27819280-27819343)
chr8 (257-370)||(3744664-3744777)
chr8 (168-341)||(6466648-6466820)
chr8 (280-371)||(15567562-15567653)
chr8 (264-334)||(1297040-1297110)
chr8 (225-343)||(30334942-30335060)
chr8 (280-343)||(15819049-15819112)
chr8 (230-375)||(30527484-30527626)
chr8 (282-341)||(15568041-15568100)
chr8 (309-375)||(31283653-31283719)
chr8 (278-342)||(17429547-17429611)
chr8 (250-328)||(29971450-29971528)
chr8 (303-372)||(6466329-6466397)
chr8 (281-338)||(36968434-36968491)
[»] chr5 (43 HSPs)
chr5 (141-372)||(34867700-34867931)
chr5 (139-343)||(34371520-34371724)
chr5 (141-375)||(2193726-2193960)
chr5 (141-343)||(34371978-34372180)
chr5 (141-375)||(10926948-10927183)
chr5 (140-375)||(20039477-20039711)
chr5 (141-372)||(21886151-21886382)
chr5 (141-375)||(39146849-39147083)
chr5 (153-375)||(10927405-10927628)
chr5 (141-375)||(27646837-27647072)
chr5 (139-343)||(42788680-42788883)
chr5 (134-343)||(17445489-17445698)
chr5 (141-343)||(18304341-18304543)
chr5 (139-374)||(5066894-5067128)
chr5 (141-374)||(15513015-15513249)
chr5 (230-375)||(189067-189212)
chr5 (230-375)||(8642036-8642181)
chr5 (230-343)||(22556535-22556648)
chr5 (262-374)||(1821937-1822049)
chr5 (230-375)||(3886603-3886748)
chr5 (230-375)||(2473958-2474103)
chr5 (230-343)||(3887091-3887204)
chr5 (230-343)||(22556968-22557081)
chr5 (230-375)||(2474404-2474549)
chr5 (140-375)||(1879990-1880220)
chr5 (152-375)||(4657995-4658217)
chr5 (262-372)||(18750201-18750311)
chr5 (230-311)||(22975076-22975157)
chr5 (229-372)||(8391327-8391469)
chr5 (278-352)||(16370733-16370807)
chr5 (229-343)||(30719839-30719953)
chr5 (257-375)||(29680109-29680220)
chr5 (281-343)||(24182279-24182341)
chr5 (231-343)||(30684590-30684702)
chr5 (257-375)||(4673473-4673591)
chr5 (197-343)||(11160715-11160861)
chr5 (285-337)||(2058696-2058748)
chr5 (280-343)||(42429194-42429257)
chr5 (285-372)||(20858546-20858633)
chr5 (308-341)||(39801498-39801531)
chr5 (296-348)||(43356649-43356701)
chr5 (295-341)||(32574694-32574740)
chr5 (311-375)||(11757283-11757347)
[»] chr4 (59 HSPs)
chr4 (141-375)||(12691995-12692229)
chr4 (141-375)||(1645745-1645979)
chr4 (141-375)||(23942785-23943016)
chr4 (141-369)||(4127891-4128120)
chr4 (141-375)||(4127433-4127668)
chr4 (141-372)||(50398537-50398768)
chr4 (143-375)||(24628973-24629208)
chr4 (141-343)||(24629461-24629662)
chr4 (141-374)||(3169116-3169349)
chr4 (141-367)||(9423862-9424088)
chr4 (140-375)||(50398989-50399224)
chr4 (139-375)||(29628664-29628899)
chr4 (141-375)||(14351705-14351939)
chr4 (141-375)||(21067648-21067875)
chr4 (181-343)||(21220359-21220521)
chr4 (141-375)||(53996111-53996345)
chr4 (169-343)||(21067220-21067394)
chr4 (143-375)||(51331277-51331509)
chr4 (140-369)||(31817854-31818083)
chr4 (230-343)||(14572178-14572291)
chr4 (145-375)||(23943238-23943464)
chr4 (231-375)||(49998636-49998780)
chr4 (141-343)||(8467828-8468029)
chr4 (242-375)||(14571717-14571850)
chr4 (230-343)||(23350311-23350424)
chr4 (230-375)||(35871627-35871771)
chr4 (230-375)||(44471321-44471466)
chr4 (141-374)||(1464057-1464290)
chr4 (280-375)||(7678618-7678713)
chr4 (251-343)||(17628531-17628623)
chr4 (282-374)||(43928961-43929052)
chr4 (141-375)||(27029188-27029421)
chr4 (281-343)||(44470902-44470964)
chr4 (170-320)||(53854858-53855008)
chr4 (141-341)||(27026414-27026613)
chr4 (152-343)||(31817426-31817617)
chr4 (260-341)||(13266115-13266196)
chr4 (297-375)||(50814821-50814899)
chr4 (230-375)||(17029329-17029474)
chr4 (231-343)||(41869918-41870030)
chr4 (239-375)||(52048663-52048798)
chr4 (230-341)||(17028873-17028984)
chr4 (229-343)||(13613925-13614039)
chr4 (295-341)||(20306191-20306237)
chr4 (278-343)||(23976247-23976312)
chr4 (249-349)||(17628986-17629086)
chr4 (288-375)||(4186224-4186311)
chr4 (280-375)||(44831046-44831141)
chr4 (297-343)||(27578485-27578531)
chr4 (300-374)||(33764929-33765003)
chr4 (241-375)||(15306087-15306227)
chr4 (257-352)||(4185741-4185836)
chr4 (298-341)||(42838690-42838733)
chr4 (298-343)||(23091539-23091584)
chr4 (306-343)||(39902481-39902518)
chr4 (285-369)||(34554483-34554567)
chr4 (278-334)||(53391934-53391990)
chr4 (296-328)||(27578952-27578984)
chr4 (239-343)||(45682211-45682315)
[»] chr1 (42 HSPs)
chr1 (141-375)||(20054082-20054316)
chr1 (141-375)||(20054538-20054772)
chr1 (141-375)||(20054994-20055228)
chr1 (141-375)||(20055450-20055684)
chr1 (141-375)||(20055906-20056140)
chr1 (141-375)||(20056362-20056596)
chr1 (141-375)||(20057265-20057499)
chr1 (140-375)||(16451935-16452170)
chr1 (140-375)||(16461088-16461323)
chr1 (141-375)||(20845663-20845897)
chr1 (141-375)||(20057721-20057955)
chr1 (141-342)||(38340816-38341017)
chr1 (141-375)||(52250116-52250350)
chr1 (141-375)||(43057525-43057759)
chr1 (145-375)||(12883438-12883668)
chr1 (141-375)||(51372876-51373110)
chr1 (141-375)||(20056818-20057043)
chr1 (141-375)||(43057067-43057300)
chr1 (140-374)||(30872953-30873188)
chr1 (230-343)||(35759642-35759755)
chr1 (230-352)||(35760939-35761061)
chr1 (230-375)||(20061193-20061338)
chr1 (194-343)||(50002741-50002890)
chr1 (141-352)||(50003100-50003311)
chr1 (257-375)||(2328341-2328459)
chr1 (141-343)||(31822697-31822899)
chr1 (229-375)||(50002287-50002433)
chr1 (226-343)||(2634919-2635036)
chr1 (230-375)||(46693737-46693883)
chr1 (141-374)||(7548003-7548234)
chr1 (140-341)||(10820501-10820702)
chr1 (263-372)||(16907266-16907375)
chr1 (286-375)||(20060342-20060431)
chr1 (230-343)||(23180729-23180842)
chr1 (280-375)||(12728040-12728136)
chr1 (269-358)||(16410742-16410831)
chr1 (263-338)||(46411173-46411248)
chr1 (288-369)||(2739578-2739660)
chr1 (276-369)||(2634511-2634604)
chr1 (280-352)||(16440604-16440676)
chr1 (300-352)||(31823109-31823161)
chr1 (140-173)||(9189351-9189384)
[»] chr2 (38 HSPs)
chr2 (140-375)||(25337999-25338234)
chr2 (141-375)||(33174868-33175102)
chr2 (140-375)||(25434058-25434293)
chr2 (140-375)||(29804591-29804826)
chr2 (141-375)||(41754199-41754433)
chr2 (141-375)||(8256436-8256670)
chr2 (140-372)||(18098883-18099116)
chr2 (141-375)||(16379302-16379537)
chr2 (141-374)||(27882929-27883162)
chr2 (141-375)||(33770920-33771145)
chr2 (138-343)||(15619805-15620010)
chr2 (144-375)||(1706955-1707185)
chr2 (141-371)||(33174415-33174643)
chr2 (145-341)||(18447954-18448150)
chr2 (141-375)||(1912434-1912668)
chr2 (170-375)||(16378877-16379081)
chr2 (230-343)||(30966233-30966346)
chr2 (230-375)||(24818325-24818470)
chr2 (230-375)||(30966689-30966834)
chr2 (138-343)||(15639647-15639846)
chr2 (141-375)||(38898914-38899148)
chr2 (229-354)||(1953153-1953278)
chr2 (230-369)||(29259628-29259767)
chr2 (230-343)||(5399851-5399964)
chr2 (233-374)||(20502023-20502165)
chr2 (141-271)||(18098667-18098798)
chr2 (240-343)||(30963754-30963857)
chr2 (229-375)||(11388187-11388331)
chr2 (278-372)||(13191021-13191115)
chr2 (283-372)||(8073944-8074033)
chr2 (250-375)||(11394554-11394677)
chr2 (278-341)||(30963299-30963362)
chr2 (226-338)||(30961922-30962042)
chr2 (242-375)||(83028-83161)
chr2 (212-341)||(16541966-16542095)
chr2 (282-334)||(8181394-8181446)
chr2 (282-343)||(36924456-36924519)
chr2 (288-342)||(26864851-26864905)
[»] chr3 (47 HSPs)
chr3 (140-343)||(39653073-39653276)
chr3 (141-375)||(11180036-11180269)
chr3 (141-375)||(28561656-28561890)
chr3 (143-375)||(50347658-50347890)
chr3 (141-343)||(16811291-16811493)
chr3 (141-375)||(13150101-13150334)
chr3 (154-375)||(32227223-32227444)
chr3 (139-343)||(14813857-14814061)
chr3 (146-343)||(16810840-16811037)
chr3 (141-375)||(37044944-37045179)
chr3 (152-369)||(30529608-30529825)
chr3 (140-375)||(32796937-32797171)
chr3 (201-375)||(25239079-25239253)
chr3 (144-375)||(25230250-25230482)
chr3 (144-375)||(25237837-25238069)
chr3 (187-375)||(32227457-32227644)
chr3 (141-375)||(2911005-2911239)
chr3 (168-374)||(20885120-20885325)
chr3 (168-370)||(25230712-25230914)
chr3 (168-370)||(25238299-25238501)
chr3 (230-375)||(31284278-31284423)
chr3 (194-375)||(39640900-39641081)
chr3 (230-373)||(25248110-25248253)
chr3 (230-341)||(8067279-8067390)
chr3 (230-373)||(41472300-41472442)
chr3 (187-341)||(14820110-14820264)
chr3 (141-371)||(25803010-25803240)
chr3 (261-375)||(32386736-32386850)
chr3 (230-375)||(27187332-27187477)
chr3 (231-343)||(7477191-7477303)
chr3 (231-343)||(7493881-7493993)
chr3 (280-375)||(13150556-13150651)
chr3 (280-375)||(25238686-25238781)
chr3 (283-375)||(4067362-4067454)
chr3 (278-343)||(29224371-29224436)
chr3 (141-238)||(39653530-39653627)
chr3 (266-338)||(47518358-47518430)
chr3 (240-343)||(25802582-25802685)
chr3 (140-274)||(13155307-13155438)
chr3 (140-221)||(970875-970956)
chr3 (230-334)||(41473996-41474100)
chr3 (266-352)||(31103985-31104071)
chr3 (299-341)||(3890046-3890088)
chr3 (299-341)||(3899868-3899910)
chr3 (141-185)||(25238863-25238907)
chr3 (276-343)||(26310023-26310090)
chr3 (230-290)||(12820643-12820703)
[»] scaffold0243 (1 HSPs)
scaffold0243 (141-375)||(1130-1364)
[»] chr7 (49 HSPs)
chr7 (141-375)||(34405593-34405827)
chr7 (141-375)||(2189054-2189288)
chr7 (142-375)||(36422163-36422396)
chr7 (139-343)||(29357490-29357693)
chr7 (141-375)||(6747600-6747834)
chr7 (141-341)||(43233323-43233523)
chr7 (187-375)||(2193212-2193400)
chr7 (141-375)||(679727-679960)
chr7 (138-331)||(26957603-26957796)
chr7 (141-372)||(2611657-2611888)
chr7 (149-375)||(35527123-35527348)
chr7 (141-375)||(42515455-42515688)
chr7 (168-375)||(28495791-28495998)
chr7 (141-375)||(35474123-35474357)
chr7 (230-375)||(2941759-2941904)
chr7 (230-375)||(18833285-18833430)
chr7 (230-375)||(42515091-42515236)
chr7 (230-375)||(9124958-9125103)
chr7 (230-375)||(13125138-13125283)
chr7 (229-372)||(6719079-6719222)
chr7 (230-340)||(11517426-11517535)
chr7 (197-375)||(28495610-28495788)
chr7 (139-315)||(3305374-3305550)
chr7 (141-273)||(10430673-10430805)
chr7 (231-375)||(36015413-36015557)
chr7 (195-375)||(46425705-46425885)
chr7 (141-370)||(29039027-29039248)
chr7 (230-341)||(5406624-5406735)
chr7 (140-274)||(2463551-2463685)
chr7 (280-375)||(2465782-2465877)
chr7 (257-375)||(2465950-2466068)
chr7 (194-343)||(22529269-22529418)
chr7 (233-341)||(25182363-25182471)
chr7 (240-321)||(13124757-13124838)
chr7 (226-375)||(31406586-31406735)
chr7 (248-338)||(11372468-11372558)
chr7 (281-375)||(26421307-26421401)
chr7 (278-343)||(31743858-31743923)
chr7 (260-372)||(1628745-1628854)
chr7 (257-375)||(26421762-26421880)
chr7 (141-323)||(16811900-16812074)
chr7 (229-343)||(9623206-9623320)
chr7 (280-369)||(16192368-16192457)
chr7 (262-331)||(6585639-6585708)
chr7 (278-328)||(2490086-2490136)
chr7 (262-335)||(33316759-33316832)
chr7 (141-185)||(2189510-2189554)
chr7 (141-367)||(37672064-37672296)
chr7 (258-374)||(11372926-11373042)
[»] scaffold0333 (2 HSPs)
scaffold0333 (139-375)||(4469-4705)
scaffold0333 (141-375)||(4926-5165)
[»] scaffold0168 (1 HSPs)
scaffold0168 (140-375)||(2651-2886)
[»] scaffold0088 (1 HSPs)
scaffold0088 (141-344)||(23583-23786)
[»] scaffold0002 (2 HSPs)
scaffold0002 (141-375)||(154668-154901)
scaffold0002 (140-274)||(151550-151681)
[»] scaffold0664 (1 HSPs)
scaffold0664 (143-366)||(3993-4207)
[»] scaffold0047 (3 HSPs)
scaffold0047 (168-375)||(17600-17807)
scaffold0047 (192-375)||(18137-18319)
scaffold0047 (141-237)||(17819-17916)
[»] scaffold0322 (2 HSPs)
scaffold0322 (231-375)||(18966-19110)
scaffold0322 (230-293)||(18205-18268)
[»] scaffold0499 (1 HSPs)
scaffold0499 (229-375)||(2053-2199)
[»] scaffold0024 (1 HSPs)
scaffold0024 (231-375)||(105720-105864)
[»] scaffold0007 (1 HSPs)
scaffold0007 (230-343)||(142308-142421)
[»] scaffold0040 (1 HSPs)
scaffold0040 (230-370)||(2217-2357)
[»] scaffold0020 (1 HSPs)
scaffold0020 (230-375)||(107465-107610)
[»] scaffold0018 (1 HSPs)
scaffold0018 (230-375)||(10299-10444)
[»] scaffold0005 (2 HSPs)
scaffold0005 (230-343)||(245085-245198)
scaffold0005 (242-375)||(245526-245659)
[»] scaffold0022 (2 HSPs)
scaffold0022 (230-343)||(162712-162825)
scaffold0022 (264-375)||(69817-69928)
[»] scaffold0557 (2 HSPs)
scaffold0557 (280-375)||(2154-2249)
scaffold0557 (141-274)||(660-793)
[»] scaffold0442 (1 HSPs)
scaffold0442 (141-274)||(2414-2548)
[»] scaffold0391 (1 HSPs)
scaffold0391 (284-339)||(14794-14849)
[»] scaffold0101 (1 HSPs)
scaffold0101 (284-342)||(45439-45497)
[»] scaffold0036 (1 HSPs)
scaffold0036 (295-372)||(26134-26211)
[»] scaffold0389 (1 HSPs)
scaffold0389 (317-375)||(13535-13593)


Alignment Details
Target: chr6 (Bit Score: 166; Significance: 9e-89; HSPs: 45)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 166; E-Value: 9e-89
Query Start/End: Original strand, 16 - 375
Target Start/End: Complemental strand, 14772087 - 14771721
Alignment:
Q  16 gttggtttatcatatcatcttgttttaaacttttggcgttctcttcgataaatctt-cactaggaaaaatggttactttata---atataattcattttg 111  Q
    |||||||||||| |||||||||||||||||||||| |||||||||||||| ||||| |||||||||||||||||  || ||    ||||||||  |||||    
T  14772087 gttggtttatcagatcatcttgttttaaacttttgtcgttctcttcgatacatcttgcactaggaaaaatggttgtttcatggtgatataatttgttttg 14771988  T
Q  112 acttgttnnnnnnncc---agaatagaggcattgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactc 208  Q
    |||||||        |   ||||||| |||||||||||||||| |||||||||||||  |||||||||||| ||||  |||| |||||||||||||||||    
T  14771987 acttgttaaaagaaaccctagaatagcggcattgtaacacccacggctgacgagggcagggagtgatcgccggtgcgcaaggcacgacaatgagcgactc 14771888  T
Q  209 ccgacagcttctaaatgaatcgaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattg 308  Q
    ||||||||||||  ||||| |||||||| ||||||||| ||||||||||| |||||| |||||||  | ||||||||||||||||  |||||||||||||    
T  14771887 ccgacagcttcttgatgaagcgaatcacgccggaatgagagggatcccgaagccgtgtaggtatgagactgcatggttgaaggaagacttataagaattg 14771788  T
Q  309 tttggtactacctatatcaacaagatgcatcttctctttagtagtctatttcataagaactccacag 375  Q
    |||||||||||||||||||||||||| ||| |||| ||| ||| |||||| ||||||||||||||||    
T  14771787 tttggtactacctatatcaacaagatccatattctttttggtaatctattccataagaactccacag 14771721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 141 - 343
Target Start/End: Original strand, 20850231 - 20850433
Alignment:
Q  141 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 240  Q
    ||||||||||||||||||||||||||||||||| ||||| ||||| |||| ||||||||||||| |||| ||||||||||| | ||| ||||||||||||    
T  20850231 tgtaacacccaaggctgacgagggcgaggagtggtcgccggtgcacaaggcacgacaatgagcggctcctgacagcttctagaggaaccgaatcacaccg 20850330  T
Q  241 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 340  Q
    |||||| |||| ||  |||||||||||||||||| | |||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||    
T  20850331 gaatgagagggttcatgaggccgtgcaggtatgggactgcatggttgaaggaaggcttataagaattgttttgtactacctatatcaacaagatgcatct 20850430  T
Q  341 tct 343  Q
    |||    
T  20850431 tct 20850433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 141 - 372
Target Start/End: Original strand, 21311881 - 21312112
Alignment:
Q  141 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 240  Q
    |||||||||||||||||||||||||| | |||| ||||||||||| |||| || |||||||||||||||||| |||||||||| |||  ||||||||||     
T  21311881 tgtaacacccaaggctgacgagggcgggaagtggtcgccagtgcacaaggcacaacaatgagcgactcccgatagcttctaaaggaactgaatcacacca 21311980  T
Q  241 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 340  Q
    |||||| |||| ||  ||||| |||||||||||  | |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||    
T  21311981 gaatgagagggttcatgaggctgtgcaggtatgagactgcatggttgaaggaaggcttataagaattgttaggtactacctatatcaacaagatgcatct 21312080  T
Q  341 tctctttagtagtctatttcataagaactcca 372  Q
    ||| ||| |||| | |||||||||||| ||||    
T  21312081 tctttttggtagcccatttcataagaaatcca 21312112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 143 - 375
Target Start/End: Original strand, 3652398 - 3652630
Alignment:
Q  143 taacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccgga 242  Q
    |||||||||||||||| ||||||| |||||| ||| | ||||| |||| ||||||||||||| |||||||||||||||| | ||| ||||||||| ||||    
T  3652398 taacacccaaggctgatgagggcggggagtggtcgtcggtgcacaaggcacgacaatgagcggctcccgacagcttctagaggaaccgaatcacatcgga 3652497  T
Q  243 atgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttc 342  Q
    |||| |||||||| ||||| ||| |||||||| | | |||||||||||||| ||||||||||||||| || |||||||||||||||||||||||||||||    
T  3652498 atgagagggatcctgaggctgtgtaggtatgggactacatggttgaaggaaggcttataagaattgtctgatactacctatatcaacaagatgcatcttc 3652597  T
Q  343 tctttagtagtctatttcataagaactccacag 375  Q
    | ||| |||||  ||| ||||||||||||||||    
T  3652598 tttttggtagttcattccataagaactccacag 3652630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 141 - 374
Target Start/End: Complemental strand, 2681452 - 2681219
Alignment:
Q  141 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 240  Q
    |||||||||||||||||||||||||| |||||| ||||| || || |||| ||||||||||||| |||| ||||| ||||| | ||| ||||||||||||    
T  2681452 tgtaacacccaaggctgacgagggcggggagtggtcgccggtacacaaggcacgacaatgagcggctcctgacagtttctagaggaaccgaatcacaccg 2681353  T
Q  241 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 340  Q
    |||||| |||| ||| ||||||||| |||| ||| | |||||||||||| |||  ||||||||||||||||||||||||| |||||||||||||||||||    
T  2681352 gaatgagagggttcctgaggccgtgtaggtttgggactgcatggttgaatgaagacttataagaattgtttggtactacccatatcaacaagatgcatct 2681253  T
Q  341 tctctttagtagtctatttcataagaactccaca 374  Q
    ||| ||  ||||   ||| |||||||||||||||    
T  2681252 tcttttcggtagctcattccataagaactccaca 2681219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 142 - 343
Target Start/End: Complemental strand, 23986552 - 23986351
Alignment:
Q  142 gtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccgg 241  Q
    |||| ||| |||||||||||||||| |||||| ||| | ||||| |||| | ||||||||||| |||||||||||||||| | ||| ||||||||| |||    
T  23986552 gtaatacctaaggctgacgagggcggggagtggtcgtcggtgcacaaggcatgacaatgagcggctcccgacagcttctagaggaaccgaatcacatcgg 23986453  T
Q  242 aatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatctt 341  Q
    ||||| |||||||| ||||||||| |||||||| | | |||||||||||| | ||||||||||||||||||||||||||||||| |||||||||||||||    
T  23986452 aatgagagggatccggaggccgtgtaggtatgggactacatggttgaaggtaggcttataagaattgtttggtactacctatatgaacaagatgcatctt 23986353  T
Q  342 ct 343  Q
    ||    
T  23986352 ct 23986351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 141 - 375
Target Start/End: Complemental strand, 6331148 - 6330914
Alignment:
Q  141 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 240  Q
    |||||||||||||||||||||||| | |||||| ||||| ||||| |||| | ||||||||||| ||||||||| |||||| |  |  ||||||||| ||    
T  6331148 tgtaacacccaaggctgacgagggtggggagtggtcgccggtgcacaaggcatgacaatgagcggctcccgacaacttctagacaagccgaatcacatcg 6331049  T
Q  241 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 340  Q
    |||||| | |||||| ||||||||| |||||||  | | ||||||||||||||  |||||||||||||||||||||||||||||||||||| ||||||||    
T  6331048 gaatgagatggatcctgaggccgtgtaggtatgagactacatggttgaaggaagacttataagaattgtttggtactacctatatcaacaatatgcatct 6330949  T
Q  341 tctctttagtagtctatttcataagaactccacag 375  Q
    ||| ||  ||||   ||||||||||||||||||||    
T  6330948 tcttttcggtagctcatttcataagaactccacag 6330914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 141 - 373
Target Start/End: Complemental strand, 20896924 - 20896692
Alignment:
Q  141 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 240  Q
    ||||||||||||||||||||||| ||  ||||| |||||  |||| |||| | ||||||||||| ||||||||| |||||| |  |  ||||||||| ||    
T  20896924 tgtaacacccaaggctgacgaggacggagagtggtcgccgttgcacaaggcatgacaatgagcggctcccgacaacttctagacaagccgaatcacatcg 20896825  T
Q  241 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 340  Q
    |||||| ||||||||  |||||||| |||||||  | | |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  20896824 gaatgagagggatccttaggccgtgtaggtatgagactacatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatct 20896725  T
Q  341 tctctttagtagtctatttcataagaactccac 373  Q
    ||| || |||||   ||| ||||||||||||||    
T  20896724 tcttttcagtagctcattccataagaactccac 20896692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 173 - 343
Target Start/End: Original strand, 27334103 - 27334273
Alignment:
Q  173 gatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccggaatgatagggatcccgaggccgtgcaggtat 272  Q
    ||||||| ||||| |||| |||||||||| |||||||| ||||||| || | |||  |||||||||||||| || |||| ||| |||| |||||||||||    
T  27334103 gatcgccggtgcacaaggcacgacaatgaacgactcccaacagcttatagaggaactgaatcacaccggaacgagagggttcctgaggtcgtgcaggtat 27334202  T
Q  273 ggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttct 343  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  27334203 ggaactgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgaatcttct 27334273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 173 - 343
Target Start/End: Original strand, 27394843 - 27395013
Alignment:
Q  173 gatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccggaatgatagggatcccgaggccgtgcaggtat 272  Q
    ||||||| ||||| |||| |||||||||| |||||||| ||||||| || | |||  |||||||||||||| || |||| ||| |||| |||||||||||    
T  27394843 gatcgccggtgcacaaggcacgacaatgaacgactcccaacagcttatagaggaactgaatcacaccggaacgagagggttcctgaggtcgtgcaggtat 27394942  T
Q  273 ggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttct 343  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  27394943 ggaactgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgaatcttct 27395013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 140 - 333
Target Start/End: Complemental strand, 2720801 - 2720608
Alignment:
Q  140 ttgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacacc 239  Q
    |||||||||| |||||||||||||||| |||||| ||||| ||||| |||  |||||||||||||||| | ||||||||||| | ||| | ||||| |||    
T  2720801 ttgtaacacctaaggctgacgagggcggggagtggtcgccggtgcacaagtcacgacaatgagcgacttcggacagcttctagacgaaccaaatcatacc 2720702  T
Q  240 ggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaaga 333  Q
    ||||||| ||||||||| ||| ||||||||||||  | ||||||||||||||||  |||||||||||||||||||||||||||||| |||||||    
T  2720701 ggaatgagagggatcccaaggtcgtgcaggtatgagactgcatggttgaaggaagacttataagaattgtttggtactacctatattaacaaga 2720608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 141 - 375
Target Start/End: Complemental strand, 2891073 - 2890841
Alignment:
Q  141 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 240  Q
    |||||||||||||||||||||||||  ||| || | ||| ||||| |||  ||||||||||||| |||| ||||| ||||| | |||||||||||||       
T  2891073 tgtaacacccaaggctgacgagggcagggactggttgccggtgcacaagccacgacaatgagcggctcctgacag-ttctagaggaatcgaatcacatta 2890975  T
Q  241 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 340  Q
    |||||| ||| ||||||||||||||||||||||| | |||||||||||||||| | |||||||||||||| || |||||||||||||| ||||||| |||    
T  2890974 gaatgagagg-atcccgaggccgtgcaggtatgggactgcatggttgaaggaaggtttataagaattgttagggactacctatatcaaaaagatgcttct 2890876  T
Q  341 tctctttagtagtctatttcataagaactccacag 375  Q
    ||| || ||||| | ||| ||||||||||||||||    
T  2890875 tcttttcagtagcccattccataagaactccacag 2890841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 141 - 375
Target Start/End: Original strand, 11062196 - 11062429
Alignment:
Q  141 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 240  Q
    |||||| ||||||||| |||| |||| |||||| || || ||||| |||| ||||||||||||| |||||||||| ||||| | ||| ||||||||| ||    
T  11062196 tgtaacgcccaaggcttacgaaggcggggagtggtcaccggtgcacaaggcacgacaatgagcggctcccgacagtttctagaggaaccgaatcacatcg 11062295  T
Q  241 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 340  Q
      |||| ||| |||| ||||| ||| ||||||| || | |||||||||||||| ||||||||||| ||||| ||||||||||||||||||||||||||||    
T  11062296 acatgagagg-atcctgaggctgtgtaggtatgaaactacatggttgaaggaaggcttataagaagtgttttgtactacctatatcaacaagatgcatct 11062394  T
Q  341 tctctttagtagtctatttcataagaactccacag 375  Q
    ||| ||| |||| | ||| ||||||||||||||||    
T  11062395 tctttttggtagcccattccataagaactccacag 11062429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 143 - 374
Target Start/End: Original strand, 17851286 - 17851517
Alignment:
Q  143 taacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccgga 242  Q
    ||||||||||||||  |||||||| | |||| ||||| ||||| |||| |||| ||| |||| ||   |||| |||||| | ||| ||||||||||||||    
T  17851286 taacacccaaggctaccgagggcgggaagtgttcgccggtgcacaaggcacgataattagcggctttagacaacttctagacgaaccgaatcacaccgga 17851385  T
Q  243 atgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttc 342  Q
    |||| |||||||||||||||||||| |||||| | ||||||||| || ||| ||||||||||  ||||||||||||||| ||||||||||||||||||||    
T  17851386 atgagagggatcccgaggccgtgcaagtatgggactgcatggttaaaagaaggcttataagatatgtttggtactacctttatcaacaagatgcatcttc 17851485  T
Q  343 tctttagtagtctatttcataagaactccaca 374  Q
    | ||| |||| | |||  ||||||||||||||    
T  17851486 tttttggtagcccattctataagaactccaca 17851517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 231 - 375
Target Start/End: Complemental strand, 17027677 - 17027533
Alignment:
Q  231 aatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaaca 330  Q
    ||||||| |||||||| |||||||| |||||||||||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  17027677 aatcacatcggaatgagagggatccagaggccgtgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaaca 17027578  T
Q  331 agatgcatcttctctttagtagtctatttcataagaactccacag 375  Q
    |||| |||||||| ||  ||||   ||||||||||||||||||||    
T  17027577 agattcatcttcttttcggtagctcatttcataagaactccacag 17027533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 230 - 375
Target Start/End: Original strand, 7911877 - 7912022
Alignment:
Q  230 gaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaac 329  Q
    |||||||| |||||||| ||||||| ||||||||||||||||| | | ||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  7911877 gaatcacatcggaatgagagggatctcgaggccgtgcaggtataggactgcatggttgaaggaaaacttataagaattgtttggtactacctatatcaac 7911976  T
Q  330 aagatgcatcttctctttagtagtctatttcataagaactccacag 375  Q
    |||||||||||||| ||  ||||   ||| ||||||||||||||||    
T  7911977 aagatgcatcttcttttcggtagctcattccataagaactccacag 7912022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 141 - 374
Target Start/End: Complemental strand, 20126418 - 20126185
Alignment:
Q  141 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 240  Q
    ||||||||||||||| |||||||||| |||||| ||||| ||||| |||| | ||||||||||| |||| |||| |||||| |  |   |||||||| ||    
T  20126418 tgtaacacccaaggccgacgagggcggggagtggtcgccggtgcacaaggcatgacaatgagcggctcctgacaacttctagacaagctgaatcacatcg 20126319  T
Q  241 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 340  Q
    |||||| ||||||||  |||| ||| |||||||  | | |||||||||||||| |||||||||||| ||||| |||||||||||||||||||||||||||    
T  20126318 gaatgagagggatcctaaggctgtgtaggtatgagactacatggttgaaggaaggcttataagaatggtttgatactacctatatcaacaagatgcatct 20126219  T
Q  341 tctctttagtagtctatttcataagaactccaca 374  Q
    ||| ||| ||||   ||| |||||||| ||||||    
T  20126218 tctttttggtagcacattccataagaattccaca 20126185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 139 - 375
Target Start/End: Original strand, 17850826 - 17851062
Alignment:
Q  139 attgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacac 238  Q
    ||||||| || ||||||| || |||||| | |||| ||||| ||||| |||| |||||||| |||| || |||||| |||||| | ||| ||||||||||    
T  17850826 attgtaatactcaaggctaacaagggcgggaagtggtcgccggtgcacaaggcacgacaattagcggcttccgacaacttctagacgaaccgaatcacac 17850925  T
Q  239 cggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcat 338  Q
    |||||||| |||||||| |||| |||||| |||||| | ||||||||| || ||| ||| ||||||  ||||||||||||||| ||||||||||||||||    
T  17850926 cggaatgagagggatcctgaggtcgtgcaagtatgggactgcatggttaaaagaatgctgataagatatgtttggtactacctttatcaacaagatgcat 17851025  T
Q  339 cttctctttagtagtctatttcataagaactccacag 375  Q
    ||||| | | |||| | |||  |||||||||||||||    
T  17851026 cttctttctggtagcccattctataagaactccacag 17851062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 141 - 303
Target Start/End: Original strand, 3652889 - 3653051
Alignment:
Q  141 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 240  Q
    ||||||||||||| |||||||||||| |||||| ||||| ||||| |||| ||||||||||||| |||||||||||||||| ||||| ||| ||||| ||    
T  3652889 tgtaacacccaagactgacgagggcggggagtggtcgccggtgcacaaggcacgacaatgagcggctcccgacagcttctagatgaaccgactcacatcg 3652988  T
Q  241 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataag 303  Q
    |||||| |||||||| ||||| ||| |||||||| | |||||||||||| ||| |||||||||    
T  3652989 gaatgagagggatcctgaggctgtgtaggtatgggactgcatggttgaacgaaggcttataag 3653051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 142 - 374
Target Start/End: Original strand, 23776352 - 23776584
Alignment:
Q  142 gtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccgg 241  Q
    |||||||| || ||||||||||  |  ||||| |||||  || | |||||||||||||||||| || ||||||||||||| | |||  ||||||| ||||    
T  23776352 gtaacaccgaaagctgacgaggatggagagtggtcgccgatgtacaaggtacgacaatgagcggcttccgacagcttctagaggaactgaatcacgccgg 23776451  T
Q  242 aatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatctt 341  Q
    ||||| ||| |||| |||||| || |||||||| | | ||||||||||||||  ||||||||||| || |||||||||||||||||||||||||||||||    
T  23776452 aatgagaggtatcctgaggccttgtaggtatgggactacatggttgaaggaagacttataagaatcgtctggtactacctatatcaacaagatgcatctt 23776551  T
Q  342 ctctttagtagtctatttcataagaactccaca 374  Q
    || ||  ||||   |||||||||||||| ||||    
T  23776552 cttttcggtagctcatttcataagaacttcaca 23776584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 230 - 372
Target Start/End: Original strand, 7912309 - 7912451
Alignment:
Q  230 gaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaac 329  Q
    |||||||| |||||||| ||||||| ||||||||||||||||||| | ||||||||||||||||| |||||| |||||||||||||||||||||||||||    
T  7912309 gaatcacatcggaatgagagggatctcgaggccgtgcaggtatgggactgcatggttgaaggaaaacttatatgaattgtttggtactacctatatcaac 7912408  T
Q  330 aagatgcatcttctctttagtagtctatttcataagaactcca 372  Q
    ||||||||| |||| ||  ||||   ||| |||||||||||||    
T  7912409 aagatgcattttcttttcggtagctcattccataagaactcca 7912451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 138 - 375
Target Start/End: Complemental strand, 33775243 - 33775004
Alignment:
Q  138 cattgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcaca 237  Q
    ||||||||||||||||| ||| |||| |  | |||| ||| | ||||| |||| |||| |||||||  ||||| |||| ||||| |  || |||||||||    
T  33775243 cattgtaacacccaaggttgatgaggacaggtagtggtcgtcggtgcacaaggcacgataatgagcagctcccaacagtttctacacaaaacgaatcaca 33775144  T
Q  238 ccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaaca--agatg 335  Q
    | ||||||| || |||| |||||||||||| |||||  |  ||||||||||||||| | ||||||||||||| |||| |||||||||||||||  |||||    
T  33775143 ctggaatgagagtgatcgcgaggccgtgcaagtatgtgaccgcatggttgaaggaaggattataagaattgtctggtgctacctatatcaacaagagatg 33775044  T
Q  336 catcttctctttagtagtctatttcataagaactccacag 375  Q
    |||||||| |||  ||||| ||| ||||||||||||||||    
T  33775043 catcttctttttgatagtccattccataagaactccacag 33775004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 229 - 343
Target Start/End: Complemental strand, 9440457 - 9440343
Alignment:
Q  229 cgaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaa 328  Q
    ||||||||| |||||||| |||||||| || | ||||||||||||||| |||||||||||| |||||||||||||||||||| |||||||| ||||||||    
T  9440457 cgaatcacatcggaatgagagggatcctgaagtcgtgcaggtatggaactgcatggttgaatgaaagcttataagaattgttcggtactacttatatcaa 9440358  T
Q  329 caagatgcatcttct 343  Q
    |||||||||| ||||    
T  9440357 caagatgcattttct 9440343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 230 - 375
Target Start/End: Original strand, 13492788 - 13492933
Alignment:
Q  230 gaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaac 329  Q
    |||||| | |||||||| | |||||| ||||| |||||||||||  | |||||||||||||||| |||||||| ||||||||||||||||||||||||||    
T  13492788 gaatcatatcggaatgagaaggatcctgaggctgtgcaggtatgagactgcatggttgaaggaaggcttataataattgtttggtactacctatatcaac 13492887  T
Q  330 aagatgcatcttctctttagtagtctatttcataagaactccacag 375  Q
    |||||||||||||| ||  ||||   ||| ||||||||||||||||    
T  13492888 aagatgcatcttcttttcggtagctcattccataagaactccacag 13492933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 140 - 343
Target Start/End: Original strand, 21311423 - 21311627
Alignment:
Q  140 ttgtaacacccaaggctgacgagggcg-aggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacac 238  Q
    |||||||||||| ||||||| |||||  ||||||| ||||| ||||| |||| ||||||||||| |  || ||| |||||||| |  || |||||||||     
T  21311423 ttgtaacacccacggctgacaagggcataggagtggtcgccggtgcacaaggaacgacaatgagaggttctcgaaagcttctagagaaaacgaatcacat 21311522  T
Q  239 cggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcat 338  Q
    |||||||| |||| ||  |||||||| || |||||| | ||||||||||||||||  |||||||||||||||||||| |||||| || |||||||| |||    
T  21311523 cggaatgagagggttcatgaggccgtacaagtatgggactgcatggttgaaggaagccttataagaattgtttggtattacctagataaacaagatccat 21311622  T
Q  339 cttct 343  Q
    |||||    
T  21311623 cttct 21311627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 141 - 375
Target Start/End: Original strand, 15929492 - 15929726
Alignment:
Q  141 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 240  Q
    ||||| |||||||| ||||||||||  || ||| |||   |||||||||| | ||||||||||| |||| |||| |||||| ||||||||||||||| |     
T  15929492 tgtaatacccaaggatgacgagggccgggtgtggtcgttggtgcataaggcatgacaatgagcggctccggacaacttctagatgaatcgaatcacatca 15929591  T
Q  241 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 340  Q
    |||| | || |||||  | ||| || | |||| | | | |||||||||| ||| ||||||||||||| ||||||||||||||||||||||| ||||||||    
T  15929592 gaataagagagatcctaatgccttgtatgtattggactacatggttgaatgaaggcttataagaattatttggtactacctatatcaacaaaatgcatct 15929691  T
Q  341 tctctttagtagtctatttcataagaactccacag 375  Q
    ||| ||  ||||   ||| ||||||||||||||||    
T  15929692 tcttttcggtagctcattccataagaactccacag 15929726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 231 - 343
Target Start/End: Complemental strand, 13191659 - 13191547
Alignment:
Q  231 aatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaaca 330  Q
    ||||||| |||||||| ||||||||  || |  || |||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  13191659 aatcacatcggaatgagagggatcctaagactatgtaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaaca 13191560  T
Q  331 agatgcatcttct 343  Q
    |||||||||||||    
T  13191559 agatgcatcttct 13191547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 230 - 334
Target Start/End: Complemental strand, 17731260 - 17731156
Alignment:
Q  230 gaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaac 329  Q
    |||||||| |||||||| |||||||| |||||||| ||||||||| | ||||||||| ||||||  ||||||||||||||||||||||||||||||||||    
T  17731260 gaatcacatcggaatgagagggatcctgaggccgttcaggtatgggactgcatggttaaaggaagacttataagaattgtttggtactacctatatcaac 17731161  T
Q  330 aagat 334  Q
    |||||    
T  17731160 aagat 17731156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 230 - 375
Target Start/End: Original strand, 16519967 - 16520112
Alignment:
Q  230 gaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaac 329  Q
    |||||||| |||||||| |||||||| ||||| ||| |||||||  | | |||||| ||||||| |||||| ||| ||||||||||||||||||||||||    
T  16519967 gaatcacatcggaatgagagggatcctgaggctgtgtaggtatgagactacatggtcgaaggaaggcttatgagatttgtttggtactacctatatcaac 16520066  T
Q  330 aagatgcatcttctctttagtagtctatttcataagaactccacag 375  Q
    |||||||||||||| ||  ||||   ||| ||||||||||||||||    
T  16520067 aagatgcatcttcttttcggtagctcattccataagaactccacag 16520112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 209 - 341
Target Start/End: Complemental strand, 31821860 - 31821728
Alignment:
Q  209 ccgacagcttctaaatgaatcgaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattg 308  Q
    ||||||||||||| |  || ||||||||| |||||||| |||||||  |||||| || |||||||  | | |||||||||||||| |||||||||||||     
T  31821860 ccgacagcttctagagaaaccgaatcacatcggaatgagagggatcatgaggccatgtaggtatgagactacatggttgaaggaatgcttataagaatta 31821761  T
Q  309 tttggtactacctatatcaacaagatgcatctt 341  Q
    |||||||||| ||||||||||||||||||||||    
T  31821760 tttggtactaactatatcaacaagatgcatctt 31821728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 143 - 343
Target Start/End: Original strand, 15929111 - 15929311
Alignment:
Q  143 taacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccgga 242  Q
    |||||||||||||||| ||||| | |||||| ||||   || | |||| | |||||||||||||| | || | |||||| || || ||||||||| |  |    
T  15929111 taacacccaaggctgatgagggtggggagtggtcgctgatgtacaaggcatgacaatgagcgacttcagatatcttctagattaaccgaatcacaacata 15929210  T
Q  243 atgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttc 342  Q
    || | | |||||| ||||||||  |||||||  | | || |||||||| |||||||||||||||||||||||| | |||||||||| ||||||||| |||    
T  15929211 ataagatggatcctgaggccgtttaggtatgagactacaaggttgaagaaaagcttataagaattgtttggtaatgcctatatcaataagatgcatattc 15929310  T
Q  343 t 343  Q
    |    
T  15929311 t 15929311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 156 - 372
Target Start/End: Original strand, 20735621 - 20735836
Alignment:
Q  156 tgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccggaatgatagggatcc 255  Q
    |||||||||||||| ||||||||| ||||||||||   |||||||||||||||| |||| ||| | |   || |  |||||| |  ||||| |||||||     
T  20735621 tgacgagggcgaggggtgatcgccggtgcataaggcttgacaatgagcgactcctgacaactt-tcaggcaaccagatcacatcataatgagagggatct 20735719  T
Q  256 cgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttctctttagtagtct 355  Q
     ||| | ||| |||||||  | | |||| ||| ||||| |||||||||||||||||| |||||| ||||||||||||||||||||||| ||  ||||||     
T  20735720 tgagactgtgtaggtatgtgactacatgattgtaggaaggcttataagaattgtttgatactacttatatcaacaagatgcatcttcttttcggtagtcc 20735819  T
Q  356 atttcataagaactcca 372  Q
    |||  |||| |||||||    
T  20735820 attctataaaaactcca 20735836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 230 - 320
Target Start/End: Complemental strand, 9440575 - 9440485
Alignment:
Q  230 gaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacc 320  Q
    |||||||| |||||||| |||||||| || | ||||||||||||| | | |||||||||| ||| ||||||||||||||||||||||||||    
T  9440575 gaatcacatcggaatgagagggatcctgaagtcgtgcaggtatgggacttcatggttgaatgaaggcttataagaattgtttggtactacc 9440485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 262 - 352
Target Start/End: Complemental strand, 9440972 - 9440882
Alignment:
Q  262 cgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttctctttagtag 352  Q
    |||||||| |||||| | |||||||||||||| ||||||||||||| ||||||||||| | |||||||||||||||| |||| || |||||    
T  9440972 cgtgcaggcatggaactacatggttgaaggaatgcttataagaattctttggtactacttttatcaacaagatgcattttcttttcagtag 9440882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 262 - 351
Target Start/End: Original strand, 32292916 - 32293005
Alignment:
Q  262 cgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttctctttagta 351  Q
    ||||||||||||  | |||||||||||| ||| |||||||||||||||||||||||||||||| |||||| || |||||| | |||||||    
T  32292916 cgtgcaggtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaaaatacatcttgtttttagta 32293005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 231 - 375
Target Start/End: Original strand, 9352062 - 9352206
Alignment:
Q  231 aatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaaca 330  Q
    ||||||| || ||||| |||||||| ||||| ||| |||||||  | | |||||| ||||| |  ||||||| | |||||||||||||||||||| ||||    
T  9352062 aatcacatcgaaatgagagggatcctgaggctgtgtaggtatgagactacatggtcgaagggagacttataatatttgtttggtactacctatataaaca 9352161  T
Q  331 agatgcatcttctctttagtagtctatttcataagaactccacag 375  Q
    ||||||||||||| ||  ||||   ||| ||||||||||||||||    
T  9352162 agatgcatcttcttttcggtagctcattccataagaactccacag 9352206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 295 - 375
Target Start/End: Original strand, 13492396 - 13492476
Alignment:
Q  295 gcttataagaattgtttggtactacctatatcaacaagatgcatcttctctttagtagtctatttcataagaactccacag 375  Q
    |||||||||||||||||| || ||||||||||||||||||||||||||| ||  ||||   ||| ||||||||||||||||    
T  13492396 gcttataagaattgtttgatattacctatatcaacaagatgcatcttcttttcggtagctaattccataagaactccacag 13492476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 285 - 341
Target Start/End: Complemental strand, 28065930 - 28065874
Alignment:
Q  285 ttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatctt 341  Q
    ||||| |||||||||||||||||||||||||||| || |||||||||||||||||||    
T  28065930 ttgaatgaaagcttataagaattgtttggtactatctctatcaacaagatgcatctt 28065874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 229 - 375
Target Start/End: Original strand, 12194328 - 12194472
Alignment:
Q  229 cgaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaa 328  Q
    |||||||||  ||||||| ||| |||| ||| |||||||| |||| || |||||| |||||| ||  ||||||| | || ||||| |||| |||||||||    
T  12194328 cgaatcacattggaatgagaggaatcctgagaccgtgcagatatg-aactgcatgattgaagaaagacttataa-atttttttggcactatctatatcaa 12194425  T
Q  329 caagatgcatcttctctttagtagtctatttcataagaactccacag 375  Q
    ||||||||||||||| |||  || |  ||| ||||||||||||||||    
T  12194426 caagatgcatcttcttttttataattcattccataagaactccacag 12194472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 227 - 372
Target Start/End: Original strand, 17205335 - 17205479
Alignment:
Q  227 atcgaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatc 326  Q
    ||||||||||| |||||| | ||||||   ||| || ||  |||||| || |||||| ||||| |||   ||||||||||||||||||||||||| || |    
T  17205335 atcgaatcacatcggaattagagggattttgagaccatggtggtatgaaactgcatgattgaatgaagaattataagaattgtttggtactacctttacc 17205434  T
Q  327 aacaagatgcatcttctctttagtagtctatttcataagaactcca 372  Q
    |||||||| |||||| | ||| |||| | ||| |||||||||||||    
T  17205435 aacaagattcatcttgt-tttggtagcccattccataagaactcca 17205479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 262 - 339
Target Start/End: Original strand, 28582995 - 28583071
Alignment:
Q  262 cgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatc 339  Q
    ||||||||||| || ||| ||||||||| ||| ||||||||||||| |||| ||| | ||||||||||||||||||||    
T  28582995 cgtgcaggtataga-ttgtatggttgaatgaaggcttataagaattatttgatacgatctatatcaacaagatgcatc 28583071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 280 - 375
Target Start/End: Original strand, 1991602 - 1991697
Alignment:
Q  280 catggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttctctttagtagtctatttcataagaactccacag 375  Q
    |||||||| | ||| ||||| ||||||||||||||| ||| ||| | ||||||||||||||||| ||  ||||   |||||||||||||| |||||    
T  1991602 catggttggaagaaggcttacaagaattgtttggtattacatatctaaacaagatgcatcttcttttcggtagctcatttcataagaacttcacag 1991697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 280 - 343
Target Start/End: Original strand, 20732627 - 20732690
Alignment:
Q  280 catggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttct 343  Q
    |||||||| ||||| ||||||||||||| ||||||||||||||||| || || |||||| ||||    
T  20732627 catggttgtaggaaggcttataagaattatttggtactacctatattaataatatgcatattct 20732690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 280 - 316
Target Start/End: Original strand, 9441099 - 9441135
Alignment:
Q  280 catggttgaaggaaagcttataagaattgtttggtac 316  Q
    |||| ||||||||||||||||||||||||||||||||    
T  9441099 catgattgaaggaaagcttataagaattgtttggtac 9441135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 278 - 341
Target Start/End: Complemental strand, 3885186 - 3885123
Alignment:
Q  278 tgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatctt 341  Q
    ||||| |||||||||| ||||| ||||||||||||||||||| ||||  ||||| || ||||||    
T  3885186 tgcatagttgaaggaatgcttaaaagaattgtttggtactacatatactaacaaaatacatctt 3885123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 147; Significance: 2e-77; HSPs: 43)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 141 - 375
Target Start/End: Original strand, 10844793 - 10845027
Alignment:
Q  141 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 240  Q
    |||||||||||||||||||||||||| |||||| ||||| ||||| |||| ||||||||||||| |||| ||||||||||| | ||| ||||||||||||    
T  10844793 tgtaacacccaaggctgacgagggcggggagtggtcgccggtgcacaaggcacgacaatgagcggctcctgacagcttctagaggaaccgaatcacaccg 10844892  T
Q  241 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 340  Q
    |||||| |||| ||| |||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10844893 gaatgagagggttcctgaggccgtgcaggtatgggactgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 10844992  T
Q  341 tctctttagtagtctatttcataagaactccacag 375  Q
    ||| ||  ||||   ||| ||||||||||||||||    
T  10844993 tcttttcggtagctcattccataagaactccacag 10845027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 141 - 375
Target Start/End: Original strand, 22026289 - 22026523
Alignment:
Q  141 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 240  Q
    ||||||||||||||||||||||||||||||||| ||||| ||||| |||| | ||||||||||| |||| ||||||||||| | ||| ||||||||||||    
T  22026289 tgtaacacccaaggctgacgagggcgaggagtggtcgccggtgcacaaggcatgacaatgagcggctcctgacagcttctagaggaaccgaatcacaccg 22026388  T
Q  241 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 340  Q
    |||||| |||| ||  |||||||||||||||||| | |||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  22026389 gaatgagagggttcgtgaggccgtgcaggtatgggactgcatggttgaatgaaggcttataagaattgtttggtactacctatatcaacaagatgcatct 22026488  T
Q  341 tctctttagtagtctatttcataagaactccacag 375  Q
    ||| ||  ||||   ||| ||||||||||||||||    
T  22026489 tcttttcggtagctcattccataagaactccacag 22026523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 141 - 375
Target Start/End: Original strand, 27925809 - 27926043
Alignment:
Q  141 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 240  Q
    ||||||||||||||||||||||| || |||||| ||||  ||||| |||| ||||||||||||| |||| ||||||||||| | ||| ||||||||||||    
T  27925809 tgtaacacccaaggctgacgaggacggggagtggtcgctggtgcacaaggcacgacaatgagcggctcctgacagcttctagaggaaccgaatcacaccg 27925908  T
Q  241 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 340  Q
    |||||| |||| ||| |||||||||||||||||| | |||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||    
T  27925909 gaatgagagggttcctgaggccgtgcaggtatgggactgcatggttgaaggaaggattataagaattgtttggtactacctatatcaacaagatgcatct 27926008  T
Q  341 tctctttagtagtctatttcataagaactccacag 375  Q
    ||| ||  ||||   ||||||||||||||||||||    
T  27926009 tcttttcggtagctcatttcataagaactccacag 27926043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 141 - 375
Target Start/End: Original strand, 32292307 - 32292541
Alignment:
Q  141 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 240  Q
    |||||||||||||||||||||||||| |||||||||||| ||||| |||| ||||||||||||| ||||||| || ||||| | ||| ||||||||||||    
T  32292307 tgtaacacccaaggctgacgagggcggggagtgatcgccggtgcacaaggcacgacaatgagcggctcccgatagtttctagaggaaccgaatcacaccg 32292406  T
Q  241 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 340  Q
    |||||| |||| ||| ||||||||||| |||||| | |||||||||||||||| |||||||||||||||||||||||| ||||||||||||| |||||||    
T  32292407 gaatgagagggttcctgaggccgtgcaagtatgggactgcatggttgaaggaatgcttataagaattgtttggtactatctatatcaacaagttgcatct 32292506  T
Q  341 tctctttagtagtctatttcataagaactccacag 375  Q
    ||| |||  ||| | ||| ||||||||||||||||    
T  32292507 tctttttgctagcccattccataagaactccacag 32292541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 140 - 375
Target Start/End: Complemental strand, 8080579 - 8080344
Alignment:
Q  140 ttgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacacc 239  Q
    |||||||||||||||||||||||||||||||||| ||||| ||||| |||| ||||||||||||| |||   |||||||||| | |||  |||||||| |    
T  8080579 ttgtaacacccaaggctgacgagggcgaggagtggtcgccggtgcacaaggcacgacaatgagcggctcttaacagcttctagaggaactgaatcacatc 8080480  T
Q  240 ggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatc 339  Q
    ||||||| |||||||| || |||||| |||||||| | | |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||     
T  8080479 ggaatgagagggatcctgaagccgtgtaggtatgggactacatggttgaaggaaagctgataagaattgtttggtactacctatatcaacaagatgcatt 8080380  T
Q  340 ttctctttagtagtctatttcataagaactccacag 375  Q
    |||| ||| |||| | ||| |||||||||| |||||    
T  8080379 ttctttttggtagcccattccataagaacttcacag 8080344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 141 - 343
Target Start/End: Complemental strand, 22549231 - 22549029
Alignment:
Q  141 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 240  Q
    |||||||||||||||||||||||||| |||||| ||||| ||||| |||| ||||||||||||| |||| ||||||||||| | ||| ||||||||||||    
T  22549231 tgtaacacccaaggctgacgagggcggggagtggtcgccggtgcacaaggcacgacaatgagcggctcctgacagcttctagaggaaccgaatcacaccg 22549132  T
Q  241 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 340  Q
    |||||| |||  ||| ||||| |||||||||||  | ||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||    
T  22549131 gaatgagaggcttcctgaggctgtgcaggtatgtgactgcatggttgaaggaagacttataagaattgtttggtactacctatatcaacaagatgcatct 22549032  T
Q  341 tct 343  Q
    |||    
T  22549031 tct 22549029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 140 - 375
Target Start/End: Complemental strand, 12827491 - 12827256
Alignment:
Q  140 ttgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacacc 239  Q
    ||||||||||||||||||||||||| | |||||||||||| ||||| |||| ||||||||||||| |||| ||| ||||||| | ||| |||||||| ||    
T  12827491 ttgtaacacccaaggctgacgagggtggggagtgatcgccggtgcacaaggcacgacaatgagcggctcctgactgcttctagaagaaccgaatcacgcc 12827392  T
Q  240 ggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatc 339  Q
    ||||||| |||||||| |||||| || |||||||| | | | |||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||    
T  12827391 ggaatgagagggatcctgaggccttgtaggtatgggactacttggttgaaggaaggcttataagaattgttgggtactacctatatcaacaagatgcatc 12827292  T
Q  340 ttctctttagtagtctatttcataagaactccacag 375  Q
    |||| ||  ||||   ||| ||||||||||||||||    
T  12827291 ttcttttcggtagctcattccataagaactccacag 12827256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 140 - 343
Target Start/End: Complemental strand, 41659341 - 41659139
Alignment:
Q  140 ttgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacacc 239  Q
    |||||||||| |||||||||||||||| |||||| ||||| ||||| |||  ||||||||||| | |||||||||||||||| | ||| |||||||||||    
T  41659341 ttgtaacacctaaggctgacgagggcggggagtggtcgccggtgcacaagc-acgacaatgagtggctcccgacagcttctagaggaaccgaatcacacc 41659243  T
Q  240 ggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatc 339  Q
    ||||||| |||| ||| || | ||||||||||||| | ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  41659242 ggaatgagagggttcctgatgtcgtgcaggtatgggactgcatggttgaaggaagacttataagaattgtttggtactacctatatcaacaagatgcatc 41659143  T
Q  340 ttct 343  Q
    ||||    
T  41659142 ttct 41659139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 141 - 375
Target Start/End: Complemental strand, 6465146 - 6464912
Alignment:
Q  141 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 240  Q
    ||||||||||| | ||||||||||||||||||| ||||| ||||| |||| |||| |||||||| ||||| ||| |||||| |  ||||||||||||  |    
T  6465146 tgtaacacccacgtctgacgagggcgaggagtggtcgccggtgcacaaggcacgataatgagcggctcccaacaacttctagagtaatcgaatcacattg 6465047  T
Q  241 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 340  Q
    |||||| ||| |||  ||||||||| |||||||||| | |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |    
T  6465046 gaatgagaggaatcatgaggccgtgtaggtatggaactacatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcattt 6464947  T
Q  341 tctctttagtagtctatttcataagaactccacag 375  Q
    ||| ||| ||||   ||| ||||| ||||||||||    
T  6464946 tctttttggtagctcattccataacaactccacag 6464912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 141 - 343
Target Start/End: Complemental strand, 22548785 - 22548583
Alignment:
Q  141 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 240  Q
    |||||||||||||||||| ||||| | |||||| ||||||||||| |||| || |||||||||| |||| ||||||||||| | ||| | ||||||||||    
T  22548785 tgtaacacccaaggctgatgagggtggggagtggtcgccagtgcacaaggcactacaatgagcggctcctgacagcttctagaggaacctaatcacaccg 22548686  T
Q  241 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 340  Q
    |||||| |||| ||| ||||| |||||||||||  | ||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||    
T  22548685 gaatgagagggttcctgaggctgtgcaggtatgtgactgcatggttgaaggaagttttataagaattgtttggtactacctatatcaacaagatgcatct 22548586  T
Q  341 tct 343  Q
    |||    
T  22548585 tct 22548583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 141 - 375
Target Start/End: Original strand, 28453249 - 28453482
Alignment:
Q  141 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 240  Q
    |||||||||||||||||||||||||| |||||| | ||| ||||| |||| ||||||||||||| ||||||||| ||| || |||| | |||||||||||    
T  28453249 tgtaacacccaaggctgacgagggcggggagtggttgccggtgcacaaggcacgacaatgagcggctcccgacaacttttagatgact-gaatcacaccg 28453347  T
Q  241 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 340  Q
    |||||| ||||||||||||| ||||||||||||  | | |||||||||| |||| ||||||||||||||||  |||||||||||| ||||||||||||||    
T  28453348 gaatgagagggatcccgaggtcgtgcaggtatgagacttcatggttgaaagaaaacttataagaattgttttatactacctatattaacaagatgcatct 28453447  T
Q  341 tctctttagtagtctatttcataagaactccacag 375  Q
    ||| | | |||| | ||| ||||||||||| ||||    
T  28453448 tctttatggtagcccattccataagaactctacag 28453482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 141 - 374
Target Start/End: Complemental strand, 33852493 - 33852261
Alignment:
Q  141 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 240  Q
    |||||||||||||||||||||||||| | |||| ||||| ||||| |||| ||||||||||||| ||||||| | |||| | | |||  ||||||||||     
T  33852493 tgtaacacccaaggctgacgagggcgtg-agtggtcgccggtgcacaaggcacgacaatgagcggctcccgataacttcaagaggaactgaatcacacca 33852395  T
Q  241 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 340  Q
    |||||| |||||||||||| |||||||||||||  | || |||||||||||||| |||||||||||||||||||||||||||||| ||||||||| ||||    
T  33852394 gaatgagagggatcccgagaccgtgcaggtatgagactgtatggttgaaggaaaacttataagaattgtttggtactacctatattaacaagatgtatct 33852295  T
Q  341 tctctttagtagtctatttcataagaactccaca 374  Q
    ||| ||| |||| | ||| |||||||||| ||||    
T  33852294 tctttttggtagcccattccataagaacttcaca 33852261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 139 - 341
Target Start/End: Complemental strand, 27022576 - 27022374
Alignment:
Q  139 attgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacac 238  Q
    ||||||| ||||||||||||||||| || |||||| ||||| ||||| |||| ||||||||||||| |||||||||||||||| | ||  |||||||||     
T  27022576 attgtaatacccaaggctgacgaggacggggagtggtcgccggtgcacaaggcacgacaatgagcggctcccgacagcttctagaggagccgaatcacat 27022477  T
Q  239 cggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcat 338  Q
    |||||||| |||||||  |||||| || |||||||| | | |||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||    
T  27022476 cggaatgagagggatcttgaggccatgtaggtatgggactacatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaacatgcat 27022377  T
Q  339 ctt 341  Q
    |||    
T  27022376 ctt 27022374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 141 - 343
Target Start/End: Complemental strand, 28375290 - 28375088
Alignment:
Q  141 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 240  Q
    ||||||| |||| ||| ||||||||   ||||| ||| | ||||| |||| |||||||| |||| |||||||||||||||| | ||| |||||||||||     
T  28375290 tgtaacaaccaaagctaacgagggcagagagtggtcgtcggtgcacaaggcacgacaattagcggctcccgacagcttctagacgaaacgaatcacacca 28375191  T
Q  241 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 340  Q
     ||||| |||||||| |||||||||||||||||  | |||||| ||||||||| |||||||||||||||||||||||||||| |||||||||||||||||    
T  28375190 taatgagagggatcctgaggccgtgcaggtatgagactgcatgattgaaggaaggcttataagaattgtttggtactacctacatcaacaagatgcatct 28375091  T
Q  341 tct 343  Q
    |||    
T  28375090 tct 28375088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 141 - 375
Target Start/End: Complemental strand, 22840765 - 22840531
Alignment:
Q  141 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 240  Q
    ||||||||||||||||||| |||||| |||||| ||||| |||||||||  |||| |||||||| ||||||| | |||||| |  ||  |||||||| ||    
T  22840765 tgtaacacccaaggctgacaagggcggggagtggtcgccggtgcataagacacgataatgagcggctcccgataacttctagagtaactgaatcacatcg 22840666  T
Q  241 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 340  Q
    |||||| || ||||| |||||  || |||||||  | | |||||| ||| |||  ||||||||||||||||||||||| |||||||||||||||||||||    
T  22840665 gaatgagagagatcctgaggctttgtaggtatgagactacatggtcgaatgaagacttataagaattgtttggtactatctatatcaacaagatgcatct 22840566  T
Q  341 tctctttagtagtctatttcataagaactccacag 375  Q
    ||| |||  |||   ||| ||||||||||||||||    
T  22840565 tctttttgttagctcattccataagaactccacag 22840531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 149 - 343
Target Start/End: Complemental strand, 27022111 - 27021913
Alignment:
Q  149 ccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccggaatgat- 247  Q
    |||||||||||||||| | |||||| ||||  ||||| |||| ||||||||||| | ||||||||| |||||| | ||  ||||||||| ||||||||      
T  27022111 ccaaggctgacgagggtggggagtggtcgcgggtgcacaaggcacgacaatgagtggctcccgacaacttctagaggagccgaatcacatcggaatgaat 27022012  T
Q  248 ---agggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttct 343  Q
       |||||||| |||||| || ||||||   | |||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  27022011 gagagggatcctgaggccatgtaggtataagactgcatggttgaaggaaggcttataagaattgtttggtactacttatatcaacaagatgcatcttct 27021913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 230 - 374
Target Start/End: Complemental strand, 34308626 - 34308482
Alignment:
Q  230 gaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaac 329  Q
    |||||||| |||||||| |||||||| |||||||| || |||||  | || ||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  34308626 gaatcacatcggaatgaaagggatcctgaggccgtacaagtatgagactgtatggttgaaggaaggcttataagaactgtttggtactacctatatcaac 34308527  T
Q  330 aagatgcatcttctctttagtagtctatttcataagaactccaca 374  Q
    |||||||||||||| ||  |||| ||||| |||||||||||||||    
T  34308526 aagatgcatcttcttttcggtagcctattccataagaactccaca 34308482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 229 - 375
Target Start/End: Complemental strand, 10844763 - 10844617
Alignment:
Q  229 cgaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaa 328  Q
    |||| ||||||||||||| |||| ||| |||||| ||||||||||| | |||||||||||||||| |||||||||| |||||||||||||||||||| ||    
T  10844763 cgaaccacaccggaatgagagggttcctgaggccttgcaggtatgggactgcatggttgaaggaaggcttataagagttgtttggtactacctatattaa 10844664  T
Q  329 caagatgcatcttctctttagtagtctatttcataagaactccacag 375  Q
    ||||||||||||||| ||  ||||   ||| ||||||||||||||||    
T  10844663 caagatgcatcttcttttcggtagctcattccataagaactccacag 10844617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 209 - 375
Target Start/End: Original strand, 2044036 - 2044202
Alignment:
Q  209 ccgacagcttctaaatgaatcgaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattg 308  Q
    |||||| |||||| | |||  |||||||| |||||||| |||||||| ||||| ||| |||||||  | | |||||||||||||| ||||||||||||||    
T  2044036 ccgacaacttctagaggaacagaatcacatcggaatgagagggatcctgaggctgtgtaggtatgagactacatggttgaaggaaggcttataagaattg 2044135  T
Q  309 tttggtactacctatatcaacaagatgcatcttctctttagtagtctatttcataagaactccacag 375  Q
    |||| ||||||||||||||||||||||||| |||| ||| |||| | ||| ||||| ||||||||||    
T  2044136 tttgatactacctatatcaacaagatgcattttctttttggtagcccattccataataactccacag 2044202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 230 - 375
Target Start/End: Original strand, 25144771 - 25144916
Alignment:
Q  230 gaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaac 329  Q
    |||||||| | |||||| || |||| ||||| ||||||||||||| |||||||| ||||||| | ||||||||||||||||||||||||||||||||| |    
T  25144771 gaatcacatcagaatgagagagatctcgaggtcgtgcaggtatgggattgcatgattgaaggcaggcttataagaattgtttggtactacctatatcagc 25144870  T
Q  330 aagatgcatcttctctttagtagtctatttcataagaactccacag 375  Q
    |||||||||||||| ||  ||||   ||| ||||||||||||||||    
T  25144871 aagatgcatcttcttttcggtagctcattccataagaactccacag 25144916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 230 - 375
Target Start/End: Complemental strand, 34309086 - 34308937
Alignment:
Q  230 gaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacct----atat 325  Q
    |||||||| |||||||| |||||||| |||||||| || |||||  | || ||||||||||||| ||||||||||| |||||||||||||||    ||||    
T  34309086 gaatcacatcggaatgagagggatcctgaggccgtacaagtatgagactgtatggttgaaggaaggcttataagaactgtttggtactacctatatatat 34308987  T
Q  326 caacaagatgcatcttctctttagtagtctatttcataagaactccacag 375  Q
    |||||||||||||||||| ||  |||| ||||| ||||||||||||||||    
T  34308986 caacaagatgcatcttcttttcggtagcctattccataagaactccacag 34308937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 251 - 375
Target Start/End: Original strand, 12100711 - 12100835
Alignment:
Q  251 gatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttctctttagt 350  Q
    ||||| |||||||| ||||||||  | |||||||||||||| |||||||||||| ||||||||||||||||||||||| |||||||||||||| ||  ||    
T  12100711 gatcctgaggccgtacaggtatgagactgcatggttgaaggcaagcttataagatttgtttggtactacctatatcaataagatgcatcttcttttcggt 12100810  T
Q  351 agtctatttcataagaactccacag 375  Q
    ||   |||||||||||||| |||||    
T  12100811 agctcatttcataagaacttcacag 12100835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 255 - 371
Target Start/End: Original strand, 41912994 - 41913110
Alignment:
Q  255 ccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttctctttagtagtc 354  Q
    |||||||| ||||||||||| | |||||| ||||| ||| |||||||||||||||||||| ||||||||||||||||||||| |||||| ||| |||| |    
T  41912994 ccgaggccatgcaggtatgggactgcatgtttgaaagaaggcttataagaattgtttggtgctacctatatcaacaagatgcgtcttctttttggtagcc 41913093  T
Q  355 tatttcataagaactcc 371  Q
     ||| ||||||||||||    
T  41913094 cattccataagaactcc 41913110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 239 - 373
Target Start/End: Original strand, 17103089 - 17103223
Alignment:
Q  239 cggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcat 338  Q
    |||||||| || ||||| |||||||| ||||||||  | ||||||||||||||||  |||||||||||||||||||||| |||||||||||||| |||||    
T  17103089 cggaatgagagagatcctgaggccgtacaggtatgagactgcatggttgaaggaagacttataagaattgtttggtactgcctatatcaacaagctgcat 17103188  T
Q  339 cttctctttagtagtctatttcataagaactccac 373  Q
    ||||| ||  ||||   ||| ||||||||||||||    
T  17103189 cttcttttcggtagctcattccataagaactccac 17103223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 230 - 375
Target Start/End: Complemental strand, 21316256 - 21316111
Alignment:
Q  230 gaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaac 329  Q
    |||||||| ||  |||| ||||||||  ||||||||||||||||  | || |||||| || ||  ||||| |||||||||||||||||||||||||||||    
T  21316256 gaatcacatcgcgatgagagggatcctaaggccgtgcaggtatgagactgtatggttaaatgagcgcttaaaagaattgtttggtactacctatatcaac 21316157  T
Q  330 aagatgcatcttctctttagtagtctatttcataagaactccacag 375  Q
    |||||||||| ||| || |||||   ||||||||||||||||||||    
T  21316156 aagatgcatcgtcttttcagtagctcatttcataagaactccacag 21316111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 240 - 341
Target Start/End: Original strand, 22705181 - 22705282
Alignment:
Q  240 ggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatc 339  Q
    ||||||| |||||||| || |||||| |||||||| | || ||| ||||||||| | |||||||||||||||||||||||||||||||||||||||||||    
T  22705181 ggaatgagagggatcctgaagccgtgtaggtatgggactggatgattgaaggaagggttataagaattgtttggtactacctatatcaacaagatgcatc 22705280  T
Q  340 tt 341  Q
    ||    
T  22705281 tt 22705282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 231 - 372
Target Start/End: Original strand, 25147536 - 25147677
Alignment:
Q  231 aatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaaca 330  Q
    ||||||| |||||||| || |||||  || | ||| |||||||  | |||||||||||||||| |||||||||||||||||||| |||||||||||||||    
T  25147536 aatcacatcggaatgagagagatcctaagactgtgtaggtatgagactgcatggttgaaggaaggcttataagaattgtttggtgctacctatatcaaca 25147635  T
Q  331 agatgcatcttctctttagtagtctatttcataagaactcca 372  Q
    ||||||||||||| ||  ||||   ||| |||||||||||||    
T  25147636 agatgcatcttcttttcggtagctcattccataagaactcca 25147677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 241 - 375
Target Start/End: Original strand, 25147977 - 25148111
Alignment:
Q  241 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 340  Q
    |||||| ||||||||||||| |||| |||||||| | ||  | |||||||||| ||||||||||||||||||||  |||||||||||||||||||||| |    
T  25147977 gaatgagagggatcccgaggtcgtgtaggtatgggactgtgtcgttgaaggaaggcttataagaattgtttggtcttacctatatcaacaagatgcatat 25148076  T
Q  341 tctctttagtagtctatttcataagaactccacag 375  Q
    ||| ||  ||||   ||| ||||||||||||||||    
T  25148077 tcttttcggtagctcattccataagaactccacag 25148111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 280 - 375
Target Start/End: Original strand, 3745150 - 3745245
Alignment:
Q  280 catggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttctctttagtagtctatttcataagaactccacag 375  Q
    ||||||||||||||| |||||||||| ||||| |||||||||||| |||||| ||||||||||| ||| |||| | ||| ||||| ||||||||||    
T  3745150 catggttgaaggaaaacttataagaactgtttagtactacctataccaacaatatgcatcttctttttggtagcccattccataataactccacag 3745245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 280 - 343
Target Start/End: Complemental strand, 27819343 - 27819280
Alignment:
Q  280 catggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttct 343  Q
    |||||||||||||| ||| ||||||||||||||||||||||||||||||||| |||||||||||    
T  27819343 catggttgaaggaaggctaataagaattgtttggtactacctatatcaacaaaatgcatcttct 27819280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 257 - 370
Target Start/End: Original strand, 3744664 - 3744777
Alignment:
Q  257 gaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttctctttagtagtcta 356  Q
    |||| |||| |||||||| | ||||||||||||||||  |||||||||||||||||  |||||||||| |||||| ||||| ||||| ||| ||||   |    
T  3744664 gaggtcgtgtaggtatgggactgcatggttgaaggaagacttataagaattgtttgacactacctataccaacaatatgcaccttctttttggtagcaca 3744763  T
Q  357 tttcataagaactc 370  Q
    ||||||||||||||    
T  3744764 tttcataagaactc 3744777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 168 - 341
Target Start/End: Original strand, 6466648 - 6466820
Alignment:
Q  168 ggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccggaatgatagggatcccgaggccgtgca 267  Q
    |||||| | ||||||||| |||| | ||||||||||  |||| ||||||||| |    || | ||||| | | |||||| |||||| | ||| | ||||     
T  6466648 ggagtggttgccagtgcacaaggcatgacaatgagcagctcctgacagcttccaggcaaaccaaatcatatcagaatgagagggattctgagactgtgcg 6466747  T
Q  268 ggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatctt 341  Q
    ||||||||| ||||||||| ||||| | ||||||| ||||||||||||||||||||| ||||||||||||||||    
T  6466748 ggtatggaactgcatggttaaaggaga-cttataaaaattgtttggtactacctataccaacaagatgcatctt 6466820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 280 - 371
Target Start/End: Complemental strand, 15567653 - 15567562
Alignment:
Q  280 catggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttctctttagtagtctatttcataagaactcc 371  Q
    |||||| ||||||| ||||||||||||||||||  ||||| |||| ||||||||| |||||||| ||| |||||  ||||||||||||||||    
T  15567653 catggtggaaggaaggcttataagaattgtttgacactacatataccaacaagatacatcttctttttggtagttcatttcataagaactcc 15567562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 264 - 334
Target Start/End: Original strand, 1297040 - 1297110
Alignment:
Q  264 tgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagat 334  Q
    ||||||||||  | ||||||||||||| ||| ||||||||||||||||||||||||||||| |||||||||    
T  1297040 tgcaggtatgagactgcatggttgaagtaaaacttataagaattgtttggtactacctataccaacaagat 1297110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 225 - 343
Target Start/End: Complemental strand, 30335060 - 30334942
Alignment:
Q  225 gaatcgaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctata 324  Q
    ||||||||||||| |||||| | | |||||| ||| | |||||||||||  | |||| ||||||| |||  ||||||| ||||||||| |||||||||||    
T  30335060 gaatcgaatcacatcggaattagatggatcctgagactgtgcaggtatgcgactgcaaggttgaaagaagacttataaaaattgtttgatactacctata 30334961  T
Q  325 tcaacaagatgcatcttct 343  Q
     ||||||||| ||||||||    
T  30334960 ccaacaagatacatcttct 30334942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 280 - 343
Target Start/End: Complemental strand, 15819112 - 15819049
Alignment:
Q  280 catggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttct 343  Q
    |||||||||||||| ||||| || |||||||||||||||| |||||||||| ||||||||||||    
T  15819112 catggttgaaggaatgcttagaaaaattgtttggtactacatatatcaacatgatgcatcttct 15819049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 230 - 375
Target Start/End: Complemental strand, 30527626 - 30527484
Alignment:
Q  230 gaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaac 329  Q
    ||||||||| ||||||| |||||| |||||||||| |  |||||  | |||||| |||||  | | ||||||||||||||||||||| || || |||||     
T  30527626 gaatcacactggaatgagagggattccgaggccgtac--gtatgagactgcatgtttgaaccaga-cttataagaattgtttggtaccacttacatcaat 30527530  T
Q  330 aagatgcatcttctctttagtagtctatttcataagaactccacag 375  Q
    ||||| |||||||| ||  |||| | ||||||||||||||||||||    
T  30527529 aagatacatcttcttttgggtagcccatttcataagaactccacag 30527484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 282 - 341
Target Start/End: Complemental strand, 15568100 - 15568041
Alignment:
Q  282 tggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatctt 341  Q
    ||||||||||||  ||||||| ||||||||||||  ||||||||||||||||||||||||    
T  15568100 tggttgaaggaagacttataacaattgtttggtatgacctatatcaacaagatgcatctt 15568041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 309 - 375
Target Start/End: Complemental strand, 31283719 - 31283653
Alignment:
Q  309 tttggtactacctatatcaacaagatgcatcttctctttagtagtctatttcataagaactccacag 375  Q
    ||||||||||||||||| ||||||||||||||||| ||  |||| | ||| ||||||||||||||||    
T  31283719 tttggtactacctatattaacaagatgcatcttcttttcggtagcccattccataagaactccacag 31283653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 278 - 342
Target Start/End: Original strand, 17429547 - 17429611
Alignment:
Q  278 tgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttc 342  Q
    ||||| ||||||||||  ||||| || ||| ||||||||||||||||||||||||||| ||||||    
T  17429547 tgcattgttgaaggaagacttatgagtattatttggtactacctatatcaacaagatgtatcttc 17429611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 250 - 328
Target Start/End: Complemental strand, 29971528 - 29971450
Alignment:
Q  250 ggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaa 328  Q
    |||||| ||||||||| |||||||  | | ||||||||||||||   |||||||||||||||| ||||| |||||||||    
T  29971528 ggatcctgaggccgtgtaggtatgagactacatggttgaaggaagatttataagaattgtttgatactatctatatcaa 29971450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 303 - 372
Target Start/End: Original strand, 6466329 - 6466397
Alignment:
Q  303 gaattgtttggtactacctatatcaacaagatgcatcttctctttagtagtctatttcataagaactcca 372  Q
    ||||||||||||||||| |||| ||||||| |||||||||  ||| |||||| |||||||||||| ||||    
T  6466329 gaattgtttggtactacttataccaacaagttgcatcttccttttggtagtc-atttcataagaaatcca 6466397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 281 - 338
Target Start/End: Complemental strand, 36968491 - 36968434
Alignment:
Q  281 atggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcat 338  Q
    ||||||||||||   ||||||||||||| ||||| |||| ||||||||||||||||||    
T  36968491 atggttgaaggatgacttataagaattgattggtgctacttatatcaacaagatgcat 36968434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 144; Significance: 1e-75; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 141 - 372
Target Start/End: Original strand, 34867700 - 34867931
Alignment:
Q  141 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 240  Q
    ||||||||||||||||||||||||||||||||  ||||| ||||| |||| ||||||||||||| |||| ||||||||||| | ||| ||||||||||||    
T  34867700 tgtaacacccaaggctgacgagggcgaggagtagtcgccggtgcacaaggcacgacaatgagcggctcctgacagcttctagaagaaccgaatcacaccg 34867799  T
Q  241 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 340  Q
    |||||| |||| ||| |||||||||||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  34867800 gaatgagagggttcctgaggccgtgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatct 34867899  T
Q  341 tctctttagtagtctatttcataagaactcca 372  Q
    ||| ||  ||||   |||||||||||||||||    
T  34867900 tcttttcggtagctcatttcataagaactcca 34867931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 139 - 343
Target Start/End: Original strand, 34371520 - 34371724
Alignment:
Q  139 attgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacac 238  Q
    |||||||||||||||||||||||||||| |||||| ||||| ||||| |||| ||||||||||||| |||| ||||||||||| | ||| ||||||||||    
T  34371520 attgtaacacccaaggctgacgagggcggggagtggtcgccggtgcacaaggcacgacaatgagcggctcctgacagcttctagaggaaccgaatcacac 34371619  T
Q  239 cggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcat 338  Q
    |||||||| |||| |||| ||||||| ||||| ||| | |||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||    
T  34371620 cggaatgagagggttcccaaggccgtacaggtgtgggactgcatggttgaaggaatgcttaaaagaattgtttggtactacctatatcaacaagatgcat 34371719  T
Q  339 cttct 343  Q
    |||||    
T  34371720 cttct 34371724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 141 - 375
Target Start/End: Original strand, 2193726 - 2193960
Alignment:
Q  141 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 240  Q
    |||||||||||||||||||||||||| |||||| ||||| ||||| |||| ||||||||||||| |||||||||||||||| | ||| |||||||| |||    
T  2193726 tgtaacacccaaggctgacgagggcggggagtggtcgccggtgcacaaggcacgacaatgagcggctcccgacagcttctagaggaaccgaatcacgccg 2193825  T
Q  241 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 340  Q
    |||||| |||||||  |||||| || |||||||| | | |||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||    
T  2193826 gaatgagagggatcatgaggccttgtaggtatgggactacatggttgaaggaaggcttataagaattgttgggtactacctatatcaacaagatgcatct 2193925  T
Q  341 tctctttagtagtctatttcataagaactccacag 375  Q
    ||| ||  ||||   ||| ||||||||||||||||    
T  2193926 tcttttcggtagctcattccataagaactccacag 2193960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 141 - 343
Target Start/End: Original strand, 34371978 - 34372180
Alignment:
Q  141 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 240  Q
    |||||||||||||||||||||||||| |||||| ||||| ||||| |||| | ||||||||||| |||| ||||||||||| | ||| |||||||||||     
T  34371978 tgtaacacccaaggctgacgagggcggggagtggtcgccggtgcacaaggcaggacaatgagcggctcctgacagcttctagaggaaccgaatcacacca 34372077  T
Q  241 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 340  Q
    |||||| |||| |||| ||||||| || |||||| | | |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||    
T  34372078 gaatgagagggttcccaaggccgtacaagtatgggactacatggttgaaggaatgcttaaaagaattgtttggtactacctatatcaacaagatgcatct 34372177  T
Q  341 tct 343  Q
    |||    
T  34372178 tct 34372180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 141 - 375
Target Start/End: Complemental strand, 10927183 - 10926948
Alignment:
Q  141 tgtaacacccaaggctgacgagggc-gaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacacc 239  Q
    |||||||||||  |||||||||||| | |||||||||| | ||||| |||| |||||||||||   ||||||||||||| || | ||| ||||||||| |    
T  10927183 tgtaacacccacagctgacgagggcaggggagtgatcgtcggtgcacaaggcacgacaatgagtagctcccgacagcttatagaggaaccgaatcacatc 10927084  T
Q  240 ggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatc 339  Q
     |||||| |||||||| |||| |||| |||||||| | | |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  10927083 agaatgagagggatcctgaggtcgtgtaggtatgggactacatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatc 10926984  T
Q  340 ttctctttagtagtctatttcataagaactccacag 375  Q
    |||  ||| |||||| ||| ||||||||||||||||    
T  10926983 ttccttttggtagtccattccataagaactccacag 10926948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 140 - 375
Target Start/End: Complemental strand, 20039711 - 20039477
Alignment:
Q  140 ttgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacacc 239  Q
    ||||||||||||||||||||||||||| ||| || ||||| ||||| |||| | ||||||||||  |||||||||||||||| |  || ||||||||| |    
T  20039711 ttgtaacacccaaggctgacgagggcggggaatggtcgccggtgcacaaggcatgacaatgagcagctcccgacagcttctagacaaaccgaatcacatc 20039612  T
Q  240 ggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatc 339  Q
    ||||||| |||||||  ||||||||| |||||| | | | ||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||     
T  20039611 ggaatgagagggatcatgaggccgtgtaggtataggactacatagttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatt 20039512  T
Q  340 ttctctttagtagtctatttcataagaactccacag 375  Q
    |||| ||| |||| | ||| ||||||||||| ||||    
T  20039511 ttct-tttggtagcccattccataagaactctacag 20039477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 141 - 372
Target Start/End: Complemental strand, 21886382 - 21886151
Alignment:
Q  141 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 240  Q
    ||||||||| |||||||| |||||||  ||||| ||||| ||||| |||| ||||||||||||| |||| |  |||||||| | ||| ||||||||||||    
T  21886382 tgtaacaccgaaggctgatgagggcggagagtggtcgccggtgcacaaggcacgacaatgagcggctcctggtagcttctagaggaaccgaatcacaccg 21886283  T
Q  241 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 340  Q
    |||||| |||| ||| ||||  |||||||||||| | |||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||    
T  21886282 gaatgagagggttcctgaggttgtgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacatatatcaacaagatgcatct 21886183  T
Q  341 tctctttagtagtctatttcataagaactcca 372  Q
    ||| ||  ||||   ||| |||||||||||||    
T  21886182 tcttttcggtagctcattccataagaactcca 21886151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 141 - 375
Target Start/End: Original strand, 39146849 - 39147083
Alignment:
Q  141 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 240  Q
    |||||||||||||||||||||||| | |||||||||||| ||||| |||| ||||||||||||| |||| |||| |||||| | |||  |||||||| ||    
T  39146849 tgtaacacccaaggctgacgagggtggggagtgatcgccggtgcacaaggcacgacaatgagcggctcctgacaacttctagaggaactgaatcacatcg 39146948  T
Q  241 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 340  Q
     ||||| |||||||  ||||||||| |||||||| | | |||||||||||| |  ||||||||||||||||| |||||| ||||| ||||||||||||||    
T  39146949 aaatgagagggatcatgaggccgtgtaggtatgggactacatggttgaaggtagacttataagaattgtttgatactacttatattaacaagatgcatct 39147048  T
Q  341 tctctttagtagtctatttcataagaactccacag 375  Q
    ||| ||| |||| | ||| ||||||||||||||||    
T  39147049 tctttttggtagcccattccataagaactccacag 39147083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 153 - 375
Target Start/End: Complemental strand, 10927628 - 10927405
Alignment:
Q  153 ggctgacgagggc-gaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccggaatgataggg 251  Q
    ||||||||||||| | |||||||||| | ||||| |||| ||||||||||||  ||||| ||| ||| || | ||| ||||||||| |||||||| ||||    
T  10927628 ggctgacgagggcaggggagtgatcgtcggtgcacaaggcacgacaatgagcagctcccaacaacttatagaggaaccgaatcacatcggaatgagaggg 10927529  T
Q  252 atcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttctctttagta 351  Q
    |||  ||||||||| |||||||  | | |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||    
T  10927528 atcttgaggccgtgtaggtatgagactacatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttctttttggta 10927429  T
Q  352 gtctatttcataagaactccacag 375  Q
    | | ||| ||||||||||||||||    
T  10927428 gcccattccataagaactccacag 10927405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 141 - 375
Target Start/End: Complemental strand, 27647072 - 27646837
Alignment:
Q  141 tgtaacacccaaggctgacgagggc-gaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacacc 239  Q
    |||||| ||||  |||||||||||| | |||||| | ||| ||||| |||| ||| ||||| ||| |||||||||||||||| | ||| ||||||||| |    
T  27647072 tgtaacgcccacagctgacgagggcaggggagtggttgccggtgcacaaggcacgccaatgtgcggctcccgacagcttctagaggaaccgaatcacatc 27646973  T
Q  240 ggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatc 339  Q
    ||||||| ||||||||   ||||||| ||||||||   | |||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||    
T  27646972 ggaatgagagggatcctagggccgtgtaggtatggggctacatggttgaaggaaggcttataagaattgtttggtactacctataacaacaagatgcatc 27646873  T
Q  340 ttctctttagtagtctatttcataagaactccacag 375  Q
    |||| ||| |||| | ||||||||||||||||||||    
T  27646872 ttctttttggtagcccatttcataagaactccacag 27646837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 139 - 343
Target Start/End: Complemental strand, 42788883 - 42788680
Alignment:
Q  139 attgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacac 238  Q
    |||||||||||||||||||||||||||| |||||| ||||| ||||| |||| || ||| |||||| ||| ||||| |||||| | ||| |||||||||     
T  42788883 attgtaacacccaaggctgacgagggcggggagtggtcgccggtgcacaaggcacaaca-tgagcggctctcgacaacttctagaggaaccgaatcacaa 42788785  T
Q  239 cggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcat 338  Q
    |||||||| |||||||| ||||||||| |||  ||| | | |||||||||| |||  |||||||||||||||||||||||||||||||||||||||||||    
T  42788784 cggaatgagagggatcctgaggccgtgtaggattgggactacatggttgaaagaagacttataagaattgtttggtactacctatatcaacaagatgcat 42788685  T
Q  339 cttct 343  Q
    |||||    
T  42788684 cttct 42788680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 134 - 343
Target Start/End: Complemental strand, 17445698 - 17445489
Alignment:
Q  134 gaggcattgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaat 233  Q
    |||| |||||||||||||||||| || ||| || |||||| ||| | ||||| |||| | | ||||||||| ||||| ||| |||||| | ||| |||||    
T  17445698 gaggaattgtaacacccaaggctaacaaggacggggagtggtcgacggtgcacaaggcatggcaatgagcggctcccaacaacttctagaggaaccgaat 17445599  T
Q  234 cacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaaga 333  Q
    |||| || ||||| |||||||| ||||||||| ||| |||| | | |||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  17445598 cacatcgaaatgagagggatcctgaggccgtgtaggcatgggactacatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaaga 17445499  T
Q  334 tgcatcttct 343  Q
    ||||||||||    
T  17445498 tgcatcttct 17445489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 141 - 343
Target Start/End: Original strand, 18304341 - 18304543
Alignment:
Q  141 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 240  Q
    ||||||||||||| ||||||||| || |||||||||||| ||||| |||  ||||||||||||| |||||||||||||||| | ||| | ||||||| ||    
T  18304341 tgtaacacccaagactgacgaggacggggagtgatcgccggtgcacaagacacgacaatgagcggctcccgacagcttctagacgaaccaaatcacaacg 18304440  T
Q  241 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 340  Q
    |||||| | |||||| |||| |||| |||||||| | | ||||| ||| | ||||||||||  ||||||||||||||||||||||||||||||||||| |    
T  18304441 gaatgagaaggatcctgaggtcgtgtaggtatgggactacatggatgatgaaaagcttatataaattgtttggtactacctatatcaacaagatgcatat 18304540  T
Q  341 tct 343  Q
    |||    
T  18304541 tct 18304543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 139 - 374
Target Start/End: Complemental strand, 5067128 - 5066894
Alignment:
Q  139 attgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacac 238  Q
    ||||||||||||| |||||||||||  | |||||| ||||| ||||  |||  || |||||||||| ||| || || |||||| |  |||||||||||||    
T  5067128 attgtaacacccatggctgacgaggatggggagtggtcgccggtgcgcaagacacaacaatgagcggctctcg-caacttctagacaaatcgaatcacac 5067030  T
Q  239 cggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcat 338  Q
    | |||||| || ||||||||||||||||| |||||  | || ||| || ||||||| |||||||||||||||||||| || |||||||||||||||||||    
T  5067029 cagaatgagagagatcccgaggccgtgcatgtatgagactgtatgattaaaggaaaacttataagaattgtttggtattatctatatcaacaagatgcat 5066930  T
Q  339 cttctctttagtagtctatttcataagaactccaca 374  Q
     |||| ||| |||||||||||||||| |||||||||    
T  5066929 tttctttttggtagtctatttcataaaaactccaca 5066894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 141 - 374
Target Start/End: Complemental strand, 15513249 - 15513015
Alignment:
Q  141 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 240  Q
    ||||||||||||||||||||||| || |||||| ||||| ||||| |||| |||| |||||||| |||||||||| || || | ||| ||||||||| ||    
T  15513249 tgtaacacccaaggctgacgaggacggggagtggtcgccggtgcacaaggcacgataatgagcggctcccgacagtttttagaggaaccgaatcacatcg 15513150  T
Q  241 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaagga--aagcttataagaattgtttggtactacctatatcaacaagatgcat 338  Q
    |||||| |||||||   |||| ||| |||||||| | | |||||||||||||  | |||||||||||||| ||||||||||| |||||||||||||||||    
T  15513149 gaatgagagggatcattaggctgtgtaggtatgggactacatggttgaaggaatatgcttataagaattg-ttggtactaccaatatcaacaagatgcat 15513051  T
Q  339 cttctctttagtagtct-atttcataagaactccaca 374  Q
    ||||| ||| ||| ||| ||| |||||||||||||||    
T  15513050 cttctttttggta-tctcattccataagaactccaca 15513015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 230 - 375
Target Start/End: Original strand, 189067 - 189212
Alignment:
Q  230 gaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaac 329  Q
    |||||||| |||||||| |||||||| |||||||| || |||||| | |||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  189067 gaatcacatcggaatgagagggatcctgaggccgtacatgtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaac 189166  T
Q  330 aagatgcatcttctctttagtagtctatttcataagaactccacag 375  Q
    |||||| ||||||| ||  ||||   ||| ||||||||||||||||    
T  189167 aagatgtatcttcttttcggtagctcattccataagaactccacag 189212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 230 - 375
Target Start/End: Complemental strand, 8642181 - 8642036
Alignment:
Q  230 gaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaac 329  Q
    |||||||| | |||||| ||||||||  ||||||||||||||||| | |||||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  8642181 gaatcacatcagaatgagagggatcctaaggccgtgcaggtatgggactgcatggttgaaggaaggcttataagaattatttggtactacctatatcaac 8642082  T
Q  330 aagatgcatcttctctttagtagtctatttcataagaactccacag 375  Q
    |||||||||||||| ||  ||||   ||| ||||||||||||||||    
T  8642081 aagatgcatcttcttttcggtagctcattccataagaactccacag 8642036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 230 - 343
Target Start/End: Original strand, 22556535 - 22556648
Alignment:
Q  230 gaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaac 329  Q
    |||||||| |||||||| |||| ||| |||||||||||||||||| | |||||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  22556535 gaatcacatcggaatgagagggttcctgaggccgtgcaggtatgggactgcatggttgaaggaaggcttatatgaattgtttggtactacctatatcaac 22556634  T
Q  330 aagatgcatcttct 343  Q
    ||||||||||||||    
T  22556635 aagatgcatcttct 22556648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 262 - 374
Target Start/End: Original strand, 1821937 - 1822049
Alignment:
Q  262 cgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttctctttagtagtctatttca 361  Q
    ||||||||||||  | |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| | ||| ||    
T  1821937 cgtgcaggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttctttttggtagcccattcca 1822036  T
Q  362 taagaactccaca 374  Q
    |||||||||||||    
T  1822037 taagaactccaca 1822049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 230 - 375
Target Start/End: Complemental strand, 3886748 - 3886603
Alignment:
Q  230 gaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaac 329  Q
    |||||||| |||||||| |||||||| |||| ||| || |||||| | |||||||| ||||||| ||||||| |||||||||||||||||||||||||||    
T  3886748 gaatcacatcggaatgagagggatcctgaggtcgtacaagtatgggactgcatggtagaaggaatgcttatatgaattgtttggtactacctatatcaac 3886649  T
Q  330 aagatgcatcttctctttagtagtctatttcataagaactccacag 375  Q
    |||||||||||||| ||  ||||   ||| ||||||||||||||||    
T  3886648 aagatgcatcttcttttcggtagctcattccataagaactccacag 3886603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 230 - 375
Target Start/End: Original strand, 2473958 - 2474103
Alignment:
Q  230 gaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaac 329  Q
    |||||||| |||||||| ||||||||  ||| ||| |||| |||  | |||||||||||||||| ||||||||||||||||||||||| |||||||||||    
T  2473958 gaatcacatcggaatgagagggatcctaaggtcgtacaggcatgagactgcatggttgaaggaaggcttataagaattgtttggtactgcctatatcaac 2474057  T
Q  330 aagatgcatcttctctttagtagtctatttcataagaactccacag 375  Q
    |||||||||||||| ||  ||||   ||| ||||||||||||||||    
T  2474058 aagatgcatcttcttttcggtagctcattccataagaactccacag 2474103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 230 - 343
Target Start/End: Complemental strand, 3887204 - 3887091
Alignment:
Q  230 gaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaac 329  Q
    |||||||| |||||||| || ||||| |||||||| ||||||||| | ||||||||||||||||  |||||| ||||| |||||||||||||||||||||    
T  3887204 gaatcacatcggaatgagagtgatcctgaggccgtacaggtatgggactgcatggttgaaggaagacttatatgaattatttggtactacctatatcaac 3887105  T
Q  330 aagatgcatcttct 343  Q
    ||||||||||||||    
T  3887104 aagatgcatcttct 3887091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 230 - 343
Target Start/End: Original strand, 22556968 - 22557081
Alignment:
Q  230 gaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaac 329  Q
    |||||||| |||||||| || | ||  |||||||||||||||||| | |||||||||||||||| ||||||| |||||||||||||||||| ||||||||    
T  22556968 gaatcacatcggaatgagagagttcatgaggccgtgcaggtatgggactgcatggttgaaggaaggcttatatgaattgtttggtactaccaatatcaac 22557067  T
Q  330 aagatgcatcttct 343  Q
    ||||||||||||||    
T  22557068 aagatgcatcttct 22557081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 230 - 375
Target Start/End: Original strand, 2474404 - 2474549
Alignment:
Q  230 gaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaac 329  Q
    |||||||| |||||||| || |||||  ||| ||| ||| ||||| | ||||||||||||||||  |||| |||||||||||||||||||||||||||||    
T  2474404 gaatcacatcggaatgagagagatcctaaggtcgtacagatatgggactgcatggttgaaggaagacttaaaagaattgtttggtactacctatatcaac 2474503  T
Q  330 aagatgcatcttctctttagtagtctatttcataagaactccacag 375  Q
    |||||||||||||| ||  ||||   ||| ||||||||||||||||    
T  2474504 aagatgcatcttcttttcggtagctcattccataagaactccacag 2474549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 140 - 375
Target Start/End: Original strand, 1879990 - 1880220
Alignment:
Q  140 ttgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacacc 239  Q
    |||||||||| ||||||||||||| || | || | ||||| |||||||||| ||||||||||| ||||||| ||| |||||| |  || | |||||||||    
T  1879990 ttgtaacaccaaaggctgacgaggacgggaagcggtcgccggtgcataaggcacgacaatgagtgactcccaacaacttctagacaaaccaaatcacacc 1880089  T
Q  240 ggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatc 339  Q
     |||||| ||||||| |||| |||||||| ||||  | ||||||||||||||||      ||||||||||   ||||| ||||||| ||||| ||||||     
T  1880090 agaatgagagggatctcgagaccgtgcagttatgtgactgcatggttgaaggaa----gttaagaattgtccagtacttcctatattaacaa-atgcata 1880184  T
Q  340 ttctctttagtagtctatttcataagaactccacag 375  Q
    |||| ||| |||||||||| || |||||||| ||||    
T  1880185 ttctttttggtagtctattccacaagaactctacag 1880220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 152 - 375
Target Start/End: Complemental strand, 4658217 - 4657995
Alignment:
Q  152 aggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccggaatgataggg 251  Q
    |||||||| ||| || |||||| |||||||||||||| | | |||||||| ||||||| |||||| ||||    ||  |||||||| || ||| | ||||    
T  4658217 aggctgacaaggacggggagtggtcgccagtgcataatgcatgacaatgaccgactcctgacagcctctaggcaaactgaatcacatcgaaataagaggg 4658118  T
Q  252 atcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttctctttagta 351  Q
    |||  ||  |||||||||||||  | | |||||||||| ||| | |||||||| ||||||| ||||||||||| |||||| ||||||||||| ||| |||    
T  4658117 atcttgaaaccgtgcaggtatgagacttcatggttgaacgaa-gattataagacttgtttgatactacctataacaacaacatgcatcttctttttggta 4658019  T
Q  352 gtctatttcataagaactccacag 375  Q
    ||| ||| |||||||||| |||||    
T  4658018 gtccattccataagaacttcacag 4657995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 262 - 372
Target Start/End: Complemental strand, 18750311 - 18750201
Alignment:
Q  262 cgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttctctttagtagtctatttca 361  Q
    ||||||||| ||||| |||||||||||||||| | |||||| ||||||||||||||||||||| ||| |||||||||||||| ||  ||||  |||| ||    
T  18750311 cgtgcaggtttggaactgcatggttgaaggaaggattataacaattgtttggtactacctataccaaaaagatgcatcttcttttcggtagcttattcca 18750212  T
Q  362 taagaactcca 372  Q
    |||||||||||    
T  18750211 taagaactcca 18750201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 230 - 311
Target Start/End: Complemental strand, 22975157 - 22975076
Alignment:
Q  230 gaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgttt 311  Q
    |||||||| |||||||| |||||||| |||||||||||||||||  | ||||||||||||| ||||||||||||||||||||    
T  22975157 gaatcacatcggaatgagagggatcctgaggccgtgcaggtatgtgactgcatggttgaagaaaagcttataagaattgttt 22975076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 229 - 372
Target Start/End: Complemental strand, 8391469 - 8391327
Alignment:
Q  229 cgaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaa 328  Q
    ||||||||| |||||||| |||||| | ||||||||| ||| |||  | | |||| |||||||||  |||||||||||||||||||||| ||| ||||||    
T  8391469 cgaatcacatcggaatgagagggattctgaggccgtgtaggcatgagactacatgattgaaggaagacttataagaattgtttggtact-cctgtatcaa 8391371  T
Q  329 caagatgcatcttctctttagtagtctatttcataagaactcca 372  Q
    ||||||||||||||| ||  ||||   ||| |||||||||||||    
T  8391370 caagatgcatcttcttttcggtagctaattccataagaactcca 8391327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 278 - 352
Target Start/End: Complemental strand, 16370807 - 16370733
Alignment:
Q  278 tgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttctctttagtag 352  Q
    ||||||||||||||||| |||||||||||||||||||||||| ||||||||||||| | ||||||| ||| ||||    
T  16370807 tgcatggttgaaggaaaacttataagaattgtttggtactacttatatcaacaagacgtatcttctttttggtag 16370733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 229 - 343
Target Start/End: Complemental strand, 30719953 - 30719839
Alignment:
Q  229 cgaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaa 328  Q
    ||||||||| | |||||| |||||||| ||||  ||||| |||||| |   ||| |||||||||| ||||||| ||||||||||||||||||||||  ||    
T  30719953 cgaatcacatcagaatgagagggatcctgaggttgtgcaagtatgggacatcattgttgaaggaaggcttatatgaattgtttggtactacctataaaaa 30719854  T
Q  329 caagatgcatcttct 343  Q
    |||||||||||||||    
T  30719853 caagatgcatcttct 30719839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 257 - 375
Target Start/End: Complemental strand, 29680220 - 29680109
Alignment:
Q  257 gaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttctctttagtagtcta 356  Q
    ||||||||| |||||||| | | |||||||||||||| |||||||||       ||||| ||||||||||||||||||||||||||| ||| |||| | |    
T  29680220 gaggccgtgtaggtatgggactacatggttgaaggaaggcttataag-------tggtaatacctatatcaacaagatgcatcttctttttggtagccca 29680128  T
Q  357 tttcataagaactccacag 375  Q
    || ||||||||||||||||    
T  29680127 ttacataagaactccacag 29680109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 281 - 343
Target Start/End: Complemental strand, 24182341 - 24182279
Alignment:
Q  281 atggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttct 343  Q
    ||||||||||||| ||||||||||||| |||||||||| ||||| ||||||||||||||||||    
T  24182341 atggttgaaggaaggcttataagaattatttggtactatctataccaacaagatgcatcttct 24182279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 231 - 343
Target Start/End: Complemental strand, 30684702 - 30684590
Alignment:
Q  231 aatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaaca 330  Q
    ||||||| ||||||||  ||||||| ||||  ||||| ||||||||   ||| |||||||| | ||||||| |||||||||||||||| |||||  ||||    
T  30684702 aatcacatcggaatgagggggatcctgaggttgtgcaagtatggaacatcattgttgaagggaggcttatatgaattgtttggtactatctataaaaaca 30684603  T
Q  331 agatgcatcttct 343  Q
    |||||||||||||    
T  30684602 agatgcatcttct 30684590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 257 - 375
Target Start/End: Complemental strand, 4673591 - 4673473
Alignment:
Q  257 gaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttctctttagtagtcta 356  Q
    ||||||||| || ||| ||| | |||| |||||||||  |||||||||||| |||||||  |||| |||||||||||||||| |||| ||| ||| |  |    
T  4673591 gaggccgtgtagatatagaactacatgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttca 4673492  T
Q  357 tttcataagaactccacag 375  Q
    || ||||||||||||||||    
T  4673491 ttccataagaactccacag 4673473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 197 - 343
Target Start/End: Complemental strand, 11160861 - 11160715
Alignment:
Q  197 aatgagcgactcccgacagcttctaaatgaatcgaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagc 296  Q
    |||||||| || ||||||  || || ||||| |||||  || |||||||| |||||||  || | |||| |||||||  | | ||| |||||||||| ||    
T  11160861 aatgagcggcttccgacaatttttagatgaaccgaattgcatcggaatgagagggatcatgaagtcgtgtaggtatgacactacatagttgaaggaaggc 11160762  T
Q  297 ttataagaattgtttggtactacctatatcaacaagatgcatcttct 343  Q
    |||||| ||||||||||||||| |||| |||||||||||||| ||||    
T  11160761 ttataataattgtttggtactatctatgtcaacaagatgcatattct 11160715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 285 - 337
Target Start/End: Complemental strand, 2058748 - 2058696
Alignment:
Q  285 ttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgca 337  Q
    |||||||||  |||||| |||||||||||||||||||||||||||||||||||    
T  2058748 ttgaaggaagacttatatgaattgtttggtactacctatatcaacaagatgca 2058696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 280 - 343
Target Start/End: Original strand, 42429194 - 42429257
Alignment:
Q  280 catggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttct 343  Q
    |||||||||||||   |||||||||||||||||||||||||| ||||||||| |||||| ||||    
T  42429194 catggttgaaggaggacttataagaattgtttggtactacctttatcaacaatatgcatattct 42429257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 285 - 372
Target Start/End: Complemental strand, 20858633 - 20858546
Alignment:
Q  285 ttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttctctttagtagtctatttcataagaactcca 372  Q
    |||||| || ||||||||||||||||||||| |  ||||||||||||||||| |||||| ||  ||||   ||| |||||||||||||    
T  20858633 ttgaagaaaggcttataagaattgtttggtattttctatatcaacaagatgcttcttcttttctgtagctcattccataagaactcca 20858546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 308 - 341
Target Start/End: Complemental strand, 39801531 - 39801498
Alignment:
Q  308 gtttggtactacctatatcaacaagatgcatctt 341  Q
    ||||||||||||||||||||||||||||||||||    
T  39801531 gtttggtactacctatatcaacaagatgcatctt 39801498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 296 - 348
Target Start/End: Complemental strand, 43356701 - 43356649
Alignment:
Q  296 cttataagaattgtttggtactacctatatcaacaagatgcatcttctcttta 348  Q
    ||||||||||||||||||||| ||||| | |||||| ||||||||||| ||||    
T  43356701 cttataagaattgtttggtacaacctaaaccaacaatatgcatcttcttttta 43356649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 295 - 341
Target Start/End: Complemental strand, 32574740 - 32574694
Alignment:
Q  295 gcttataagaattgtttggtactacctatatcaacaagatgcatctt 341  Q
    ||||||| ||||||||||||||||||||||  ||||| |||||||||    
T  32574740 gcttataggaattgtttggtactacctatacaaacaaaatgcatctt 32574694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 311 - 375
Target Start/End: Complemental strand, 11757347 - 11757283
Alignment:
Q  311 tggtactacctatatcaacaagatgcatcttctctttagtagtctatttcataagaactccacag 375  Q
    ||||||||| ||||||||||| ||||||||||| ||  |||||  | | ||||||||||||||||    
T  11757347 tggtactacttatatcaacaaaatgcatcttcttttcggtagttcaatccataagaactccacag 11757283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 143; Significance: 5e-75; HSPs: 59)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 141 - 375
Target Start/End: Complemental strand, 12692229 - 12691995
Alignment:
Q  141 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 240  Q
    |||||||||||||||||||||||||| |||||| ||||| ||||| |||| ||||||||||||| |||| ||||||||||| | ||| ||||||||||||    
T  12692229 tgtaacacccaaggctgacgagggcggggagtggtcgccggtgcacaaggcacgacaatgagcggctcctgacagcttctagaggaaccgaatcacaccg 12692130  T
Q  241 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 340  Q
    |||||| |||| ||| |||||||||||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  12692129 gaatgagagggttcctgaggccgtgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatct 12692030  T
Q  341 tctctttagtagtctatttcataagaactccacag 375  Q
    ||| ||  ||||   ||| ||||||||||||||||    
T  12692029 tcttttcggtagctcattccataagaactccacag 12691995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 141 - 375
Target Start/End: Complemental strand, 1645979 - 1645745
Alignment:
Q  141 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 240  Q
    |||||||||||||||||||||||||| |||||| ||||| ||||| |||| ||||||||||||| |||| ||||||||||| | ||| ||||||||| ||    
T  1645979 tgtaacacccaaggctgacgagggcggggagtggtcgccggtgcacaaggcacgacaatgagcggctcctgacagcttctagaggaaccgaatcacatcg 1645880  T
Q  241 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 340  Q
    |||||| ||| |||  ||||||||| |||||||| | | ||||||||||||||  |||||||||||||||||||| ||||||||||||||||||||||||    
T  1645879 gaatgagaggaatcttgaggccgtgtaggtatgggactacatggttgaaggaagacttataagaattgtttggtattacctatatcaacaagatgcatct 1645780  T
Q  341 tctctttagtagtctatttcataagaactccacag 375  Q
    ||| ||| |||| | ||| ||||||||||||||||    
T  1645779 tctttttggtagcccattccataagaactccacag 1645745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 141 - 375
Target Start/End: Complemental strand, 23943016 - 23942785
Alignment:
Q  141 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 240  Q
    ||||||||| |||| ||||||||||| |||||| ||||| ||||| |||| ||||||||||||   ||| ||||||||||| | ||| ||||||||| ||    
T  23943016 tgtaacacctaaggatgacgagggcggggagtggtcgccggtgcacaaggcacgacaatgagc---tcctgacagcttctagaggaaccgaatcacatcg 23942920  T
Q  241 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 340  Q
    |||||| |||||||| | ||||||| |||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23942919 gaatgagagggatcctggggccgtgtaggtatggaactacatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 23942820  T
Q  341 tctctttagtagtctatttcataagaactccacag 375  Q
    ||| ||| ||||   ||| ||||||||||||||||    
T  23942819 tcttttttgtagcacattccataagaactccacag 23942785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 141 - 369
Target Start/End: Complemental strand, 4128120 - 4127891
Alignment:
Q  141 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaa-atgaatcgaatcacacc 239  Q
    ||||||||||||||||||||||||||||||||| ||||| ||||| |||| ||||||||||||| ||||| ||||||||||| | ||||||||||||| |    
T  4128120 tgtaacacccaaggctgacgagggcgaggagtggtcgccggtgcacaaggcacgacaatgagcggctcccaacagcttctaagaggaatcgaatcacatc 4128021  T
Q  240 ggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatc 339  Q
    ||||||| |||||||| |||||| || ||| |||  | |  ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  4128020 ggaatgagagggatcctgaggccatgtaggcatgagactatatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatc 4127921  T
Q  340 ttctctttagtagtctatttcataagaact 369  Q
    |||| ||  |||| | ||| ||||||||||    
T  4127920 ttcttttcggtagccaattccataagaact 4127891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 141 - 375
Target Start/End: Complemental strand, 4127668 - 4127433
Alignment:
Q  141 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaa-atgaatcgaatcacacc 239  Q
    ||||||||||||| |||||||||||| |||||| ||||| ||||| |||| ||||||||||||| ||||||||| ||||||| | ||| ||||||||| |    
T  4127668 tgtaacacccaagactgacgagggcggggagtggtcgccggtgcacaaggcacgacaatgagcggctcccgacaacttctaagaggaaccgaatcacatc 4127569  T
Q  240 ggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatc 339  Q
    ||||||| |||||||| |||||| || |||||||| | | ||| ||||||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  4127568 ggaatgagagggatcctgaggccatgtaggtatgggactacatagttgaaggaagacttataagaattgtttggtactacctatatcaacaagatgcatc 4127469  T
Q  340 ttctctttagtagtctatttcataagaactccacag 375  Q
    |||| ||  ||||   ||| ||||||||||||||||    
T  4127468 ttcttttcggtagctcattccataagaactccacag 4127433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 141 - 372
Target Start/End: Complemental strand, 50398768 - 50398537
Alignment:
Q  141 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 240  Q
    |||||||||||||||||||||||||| |||||| ||||| ||||| |||| | ||||||||||| ||||||||| |||||| |  |  ||||||||| ||    
T  50398768 tgtaacacccaaggctgacgagggcggggagtggtcgccggtgcacaaggcatgacaatgagcggctcccgacaacttctagacaagccgaatcacatcg 50398669  T
Q  241 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 340  Q
    |||||| |||||||| ||||||||| |||||| | | | |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  50398668 gaatgagagggatcctgaggccgtgtaggtataggactacatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatct 50398569  T
Q  341 tctctttagtagtctatttcataagaactcca 372  Q
    ||| ||  ||||   ||| |||||||||||||    
T  50398568 tcttttcggtagctcattccataagaactcca 50398537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 143 - 375
Target Start/End: Complemental strand, 24629208 - 24628973
Alignment:
Q  143 taacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccgga 242  Q
    ||||||| |||||| |||||||  ||||||| ||||| ||||| |||| ||||||||||||| |||| ||||||||||  | ||| ||||||||||||||    
T  24629208 taacacctaaggctaacgagggacaggagtggtcgccggtgcacaaggcacgacaatgagcggctcctgacagcttcttgaggaaccgaatcacaccgga 24629109  T
Q  243 atgatagggatcccgaggccgtgcaggtatggaattgcatggttgaagga---aagcttataagaattgtttggtactacctatatcaacaagatgcatc 339  Q
    |||| |||| ||| ||||||||| |||||||| | ||||||||| |||||   | |||||||||||||||||||||||||||||||||||||||||||||    
T  24629108 atgagagggttcctgaggccgtgtaggtatgggactgcatggttaaaggaattaggcttataagaattgtttggtactacctatatcaacaagatgcatc 24629009  T
Q  340 ttctctttagtagtctatttcataagaactccacag 375  Q
    |||| || |||||    || ||||||||||||||||    
T  24629008 ttcttttcagtagctcgttccataagaactccacag 24628973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 141 - 343
Target Start/End: Complemental strand, 24629662 - 24629461
Alignment:
Q  141 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 240  Q
    |||||||||||||||| ||||||  | |||||| ||||| || || |||| ||||||||||||| |||  ||||||||||| | ||| ||||||||||||    
T  24629662 tgtaacacccaaggctaacgaggtgg-ggagtggtcgccggttcacaaggcacgacaatgagcggctcttgacagcttctagaggaaccgaatcacaccg 24629564  T
Q  241 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 340  Q
    |||||| |||| ||| |||| |||| |||||||| | ||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  24629563 gaatgagagggttcctgaggtcgtgtaggtatgggactgcatggttaaaggaatgcttataagaattgtttggtactacctatatcaacaagatgcatct 24629464  T
Q  341 tct 343  Q
    |||    
T  24629463 tct 24629461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 141 - 374
Target Start/End: Original strand, 3169116 - 3169349
Alignment:
Q  141 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 240  Q
    |||||||||||||| |||||||| || |||||| || || ||||| |||  |||||||||||||||||| |||||||| || | ||| ||||||||| ||    
T  3169116 tgtaacacccaaggttgacgaggacggggagtggtcaccggtgcacaagacacgacaatgagcgactcctgacagcttatagaggaaccgaatcacatcg 3169215  T
Q  241 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 340  Q
    |||||| ||| |||  ||||||||| |||||||| | | ||||||||||||||  ||||||| |||||||||||||||||||||||||||||||||||||    
T  3169216 gaatgagaggaatcatgaggccgtgtaggtatgggactacatggttgaaggaagacttataaaaattgtttggtactacctatatcaacaagatgcatct 3169315  T
Q  341 tctctttagtagtctatttcataagaactccaca 374  Q
    ||| ||| |||  | | | |||||||||||||||    
T  3169316 tctttttggtaacccaatccataagaactccaca 3169349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 141 - 367
Target Start/End: Complemental strand, 9424088 - 9423862
Alignment:
Q  141 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 240  Q
    |||||||||||  |  |||||||||| |||||| ||| | ||||| |||| ||||||| ||| | ||||||||  |||||| | ||| ||||||||||||    
T  9424088 tgtaacacccacagaagacgagggcggggagtggtcgtcggtgcacaaggcacgacaaagagtggctcccgacgacttctagacgaaccgaatcacaccg 9423989  T
Q  241 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 340  Q
    |||||| |||||||| |||| |||||| |||||| | |||||||||||| ||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  9423988 gaatgagagggatcctgaggtcgtgcatgtatgggactgcatggttgaaagaaggcttataataattgtttggtactacctatatcaacaagatgcatct 9423889  T
Q  341 tctctttagtagtctatttcataagaa 367  Q
    ||| | |||||| | ||| ||||||||    
T  9423888 tctttctagtagcccattccataagaa 9423862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 140 - 375
Target Start/End: Complemental strand, 50399224 - 50398989
Alignment:
Q  140 ttgtaaca-cccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacac 238  Q
    |||||||| |||| |||||||||||||| |||||| ||||||||||| |||| | ||||||||||| || | |||| |||||| |  |  |||||||||     
T  50399224 ttgtaacatcccagggctgacgagggcg-ggagtggtcgccagtgcacaaggcatgacaatgagcggcttctgacaacttctagacaagccgaatcacat 50399126  T
Q  239 cggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcat 338  Q
    |||||||| |||||||| ||| ||||| |||||||  ||| |||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||    
T  50399125 cggaatgagagggatcctgagaccgtgtaggtatgagattacatggttgaaggaaggcttataagaattgtttggtactacctatatcaacacgatgcat 50399026  T
Q  339 cttctctttagtagtctatttcataagaactccacag 375  Q
    ||||| ||  ||||   ||| ||||||||||||||||    
T  50399025 cttcttttcggtagctcattccataagaactccacag 50398989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 139 - 375
Target Start/End: Complemental strand, 29628899 - 29628664
Alignment:
Q  139 attgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacac 238  Q
    ||||||||| ||||||| ||||||| || |||||| ||||| ||||| |||| ||| ||||||| | || | ||||||||||| | ||| |||||||||     
T  29628899 attgtaacatccaaggcggacgaggacggggagtggtcgccggtgcacaaggcacgccaatgagtggcttctgacagcttctagaggaaccgaatcacat 29628800  T
Q  239 cggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcat 338  Q
    || ||||| |||||||| ||||||||| |||||||  | | ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||  |    
T  29628799 cgaaatgagagggatcctgaggccgtgtaggtatgagactacatggttgaaggaagacttataagaattgtttggtactacctatatcaacaagatgtgt 29628700  T
Q  339 cttctctttagtagtctatttcataagaactccacag 375  Q
    ||| | ||| |||| | ||| ||||||||||||||||    
T  29628699 ctt-tgtttggtagcccattccataagaactccacag 29628664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 141 - 375
Target Start/End: Original strand, 14351705 - 14351939
Alignment:
Q  141 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 240  Q
    ||||||||||||||||||  |||    |||||| | ||| ||||| |||| ||||||||||||| ||||||||| |||||| |  || |||||||||||     
T  14351705 tgtaacacccaaggctgataaggctagggagtggttgccggtgcacaaggcacgacaatgagcggctcccgacaacttctagacaaaccgaatcacacca 14351804  T
Q  241 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 340  Q
    |||||| |||||||| |||| |||||| |||||    |||||||||||||||| |||| ||||| || |||||||||| |||||||||||||||||||||    
T  14351805 gaatgagagggatcctgaggtcgtgcatgtatgagtctgcatggttgaaggaaggcttgtaagagttttttggtactatctatatcaacaagatgcatct 14351904  T
Q  341 tctctttagtagtctatttcataagaactccacag 375  Q
    ||| ||| |||  ||||| ||||||||||||||||    
T  14351905 tctttttggtatcctattccataagaactccacag 14351939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 141 - 375
Target Start/End: Original strand, 21067648 - 21067875
Alignment:
Q  141 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 240  Q
    |||||||||||||  ||| ||||||| |||||| ||||| ||||| |||| ||||||||||||| |||||||||  || || | ||| |||||||||||     
T  21067648 tgtaacacccaagt-tgatgagggcggggagtggtcgccggtgcagaaggcacgacaatgagcggctcccgacaaattatagacgaaccgaatcacacca 21067746  T
Q  241 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 340  Q
    |||||  |   ||||||||||||||||||||||| | ||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||| ||| |    
T  21067747 gaatggaa---atcccgaggccgtgcaggtatgggactgcatggttgaaggaagacttataagaattgtttggtgctacctatatcaacaagatacattt 21067843  T
Q  341 tctctttagtagtctatttcataagaactccacag 375  Q
    |   ||| |||||| ||| |||||||||| |||||    
T  21067844 t---tttggtagtccattccataagaacttcacag 21067875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 181 - 343
Target Start/End: Complemental strand, 21220521 - 21220359
Alignment:
Q  181 gtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgc 280  Q
    ||||| |||| ||||||||||||| |||||| ||||||||| | ||| ||||||||| | |||||| |||||||  |||||| || ||||||| || |      
T  21220521 gtgcacaaggcacgacaatgagcggctcccggcagcttctagaggaaccgaatcacatcagaatgagagggatcatgaggccatgtaggtatgaaactat 21220422  T
Q  281 atggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttct 343  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  21220421 atggttgaaggaatgcttataagaattgtttggtactacctatatcaacaagatgcatcttct 21220359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 141 - 375
Target Start/End: Complemental strand, 53996345 - 53996111
Alignment:
Q  141 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 240  Q
    ||||||||  ||||||||||| ||  | ||||| ||||| ||||| |||| ||||||||||||| ||||| ||| ||| || | ||| ||||||||| ||    
T  53996345 tgtaacacggaaggctgacgacggacaagagtggtcgccggtgcacaaggcacgacaatgagcggctcccaacaacttttagaggaaccgaatcacatcg 53996246  T
Q  241 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 340  Q
    |||||| | |||||| |||||  || || ||||| | | |||||||||||||| |||||||| ||||||||||||||||||||||||||||||| |||||    
T  53996245 gaatgagaaggatcctgaggctatgtagatatgggactacatggttgaaggaatgcttataaaaattgtttggtactacctatatcaacaagattcatct 53996146  T
Q  341 tctctttagtagtct-atttcataagaactccacag 375  Q
    ||| ||| ||| ||| ||| ||||||||||||||||    
T  53996145 tctttttggta-tctcattccataagaactccacag 53996111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 169 - 343
Target Start/End: Original strand, 21067220 - 21067394
Alignment:
Q  169 gagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccggaatgatagggatcccgaggccgtgcag 268  Q
    ||||| |||||  |||| |||| |||| |||||||| ||||||||| ||| || | |||||||||||||||||||||| ||||||||||||| ||||||     
T  21067220 gagtggtcgccgatgcacaaggcacgataatgagcggctcccgacaacttatagacgaatcgaatcacaccggaatgagagggatcccgaggtcgtgcat 21067319  T
Q  269 gtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttct 343  Q
    |||||  | ||||||||||||||||  || |||| |||| ||||||||||| |||||||||||||||||||||||    
T  21067320 gtatgagactgcatggttgaaggaagactaataataattatttggtactacatatatcaacaagatgcatcttct 21067394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 143 - 375
Target Start/End: Complemental strand, 51331509 - 51331277
Alignment:
Q  143 taacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccgga 242  Q
    |||||||||||||||| ||||||| |||||| | | | ||||| |||| | || ||||||||  |||| | | |||||| |  |  ||||||||| ||||    
T  51331509 taacacccaaggctgatgagggcggggagtggttgtcggtgcacaaggcatgataatgagcggttccctataacttctagacaagccgaatcacatcgga 51331410  T
Q  243 atgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttc 342  Q
    |||| ||| |||  ||||||||| |||||||| | | |||||||||||||| |||||||||||||||||||||||| ||||||||||||||| |||||||    
T  51331409 atgagaggaatcatgaggccgtgtaggtatgggactacatggttgaaggaaggcttataagaattgtttggtactatctatatcaacaagatacatcttc 51331310  T
Q  343 tctttagtagtctatttcataagaactccacag 375  Q
    | ||  ||||   ||||||||||||||||||||    
T  51331309 ttttcggtagctcatttcataagaactccacag 51331277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 140 - 369
Target Start/End: Complemental strand, 31818083 - 31817854
Alignment:
Q  140 ttgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacacc 239  Q
    ||||||||||| ||  |||||| || | ||||||||||||  |||| |||| | |||||| | ||  |||||| |||||||    ||||||||||||| |    
T  31818083 ttgtaacacccgagattgacgatggtggggagtgatcgccgatgcacaaggcatgacaataaacggatcccgaaagcttctggtcgaatcgaatcacatc 31817984  T
Q  240 ggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatc 339  Q
    ||||| | ||||||   |||| | |||| |||||| | |||||||||||||||| |||||||||||||||| ||||||||||||| ||||||||||||||    
T  31817983 ggaataagagggattatgaggtcatgcatgtatgggactgcatggttgaaggaaggcttataagaattgttcggtactacctataccaacaagatgcatc 31817884  T
Q  340 ttctctttagtagtctatttcataagaact 369  Q
    |||| ||  |||||| ||||||||||||||    
T  31817883 ttcttttcggtagtccatttcataagaact 31817854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 230 - 343
Target Start/End: Complemental strand, 14572291 - 14572178
Alignment:
Q  230 gaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaac 329  Q
    |||||||| |||||||| |||||||| |||||| || |||||||| | | |||||||||||| | |||||||||||||||||||||||||||||||||||    
T  14572291 gaatcacatcggaatgagagggatcctgaggccatgtaggtatgggactacatggttgaagggaggcttataagaattgtttggtactacctatatcaac 14572192  T
Q  330 aagatgcatcttct 343  Q
    ||||||||||||||    
T  14572191 aagatgcatcttct 14572178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 145 - 375
Target Start/End: Complemental strand, 23943464 - 23943238
Alignment:
Q  145 acacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccggaat 244  Q
    ||||| |||| |||||||| ||  ||||| ||||| ||| || ||| ||||||||||||| |||  ||||||||||| | ||| ||||||||| |  |||    
T  23943464 acacctaaggatgacgaggacggagagtggtcgccggtgtatgaggcacgacaatgagcggctcttgacagcttctagaggaaccgaatcacatcaaaat 23943365  T
Q  245 gatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttctc 344  Q
    ||||||||||| ||||| ||| |||||||  |   ||||||||||||||  ||||||| || | |||||||||||||||||||||||||||||||||||     
T  23943364 gatagggatcctgaggc-gtgtaggtatgtca---catggttgaaggaagacttataaaaaatatttggtactacctatatcaacaagatgcatcttctt 23943269  T
Q  345 tttagtagtctatttcataagaactccacag 375  Q
    ||| ||||   ||| ||||||||||||||||    
T  23943268 tttggtagcacattccataagaactccacag 23943238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 231 - 375
Target Start/End: Original strand, 49998636 - 49998780
Alignment:
Q  231 aatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaaca 330  Q
    ||||||| |||||||| ||||||||  |||| ||| ||| |||| | ||||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  49998636 aatcacatcggaatgagagggatcctaaggctgtgtaggcatgggactgcatggttgaaggaagacttataagaattgtttggtactacctatatcaaca 49998735  T
Q  331 agatgcatcttctctttagtagtctatttcataagaactccacag 375  Q
    ||||||||||||| ||  ||||   ||| ||||||||||||||||    
T  49998736 agatgcatcttcttttcggtagctcattccataagaactccacag 49998780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 141 - 343
Target Start/End: Complemental strand, 8468029 - 8467828
Alignment:
Q  141 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 240  Q
    |||||| ||| ||| ||||||||||| |||||| ||||||||||| |||| | |||| || ||| |||| | |||||||||    || |||| |||| |     
T  8468029 tgtaacgcccgaggttgacgagggcggggagtggtcgccagtgcacaaggcatgacattgcgcggctcctggcagcttctaggc-aaccgaaccacatca 8467931  T
Q  241 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 340  Q
    |||||| |||||||| ||| | |||||||||||  | | ||||||||||||||  ||||||||||||||||||||||||||||| |||||||||||||||    
T  8467930 gaatgaaagggatcctgagactgtgcaggtatgagactacatggttgaaggaagacttataagaattgtttggtactacctataccaacaagatgcatct 8467831  T
Q  341 tct 343  Q
    |||    
T  8467830 tct 8467828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 242 - 375
Target Start/End: Complemental strand, 14571850 - 14571717
Alignment:
Q  242 aatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatctt 341  Q
    ||||| |||||||  ||| ||||| |||||||| | | |||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||    
T  14571850 aatgaaagggatcttgagtccgtgtaggtatgggacttcatggttgaagggatgcttataagaattgtttggtactacctatatcaacaagatgcatctt 14571751  T
Q  342 ctctttagtagtctatttcataagaactccacag 375  Q
    || || ||||| |||   ||||||||||||||||    
T  14571750 cttttcagtagcctaaaccataagaactccacag 14571717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 230 - 343
Target Start/End: Complemental strand, 23350424 - 23350311
Alignment:
Q  230 gaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaac 329  Q
    |||||||| |||||||| || ||||  |||||||| |||||| || | |||||||||||||||| ||||||||||||||||||||||| |||||||||||    
T  23350424 gaatcacatcggaatgagagagatcttgaggccgtacaggtaggggactgcatggttgaaggaaggcttataagaattgtttggtacttcctatatcaac 23350325  T
Q  330 aagatgcatcttct 343  Q
    ||||||||||||||    
T  23350324 aagatgcatcttct 23350311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 230 - 375
Target Start/End: Original strand, 35871627 - 35871771
Alignment:
Q  230 gaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaac 329  Q
    |||||||| |||||||| |||||||| |||||||| ||||||||| | | |||||||||||||| ||||||| |||||||||||||| ||||||||||||    
T  35871627 gaatcacatcggaatgagagggatcctgaggccgtacaggtatgggacttcatggttgaaggaaggcttatatgaattgtttggtaccacctatatcaac 35871726  T
Q  330 aagatgcatcttctctttagtagtctatttcataagaactccacag 375  Q
    ||||||||| |||| ||  ||||   ||| ||||||||||||||||    
T  35871727 aagatgcat-ttcttttcggtagctcattccataagaactccacag 35871771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 230 - 375
Target Start/End: Complemental strand, 44471466 - 44471321
Alignment:
Q  230 gaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaac 329  Q
    |||||||| |||||||| || ||||  |||||||| ||||||||  | | ||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  44471466 gaatcacatcggaatgagagagatcttgaggccgtacaggtatgagactacatggttgaaggaagacttataagaattgtttggtactacctatatcaac 44471367  T
Q  330 aagatgcatcttctctttagtagtctatttcataagaactccacag 375  Q
    |||||||||||||| ||  ||||   ||| ||||||||||||||||    
T  44471366 aagatgcatcttcttttcggtagctcattccataagaactccacag 44471321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 141 - 374
Target Start/End: Original strand, 1464057 - 1464290
Alignment:
Q  141 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 240  Q
    ||||||||||||| || |||| | ||  ||||| ||||| |||||||||  | |||||||| || ||  ||||| ||| || | ||| ||||||||| |     
T  1464057 tgtaacacccaagactaacgaagacggagagtggtcgccggtgcataagacatgacaatgaacggctttcgacaccttttagacgaaccgaatcacatca 1464156  T
Q  241 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 340  Q
    |||||| |||||||  | | ||||| |||||||  | | ||| |||||| |||| |||||||||||||||||||||||||||||||||||||||||||||    
T  1464157 gaatgagagggatcatgcgaccgtgtaggtatgagaatacatagttgaaagaaaacttataagaattgtttggtactacctatatcaacaagatgcatct 1464256  T
Q  341 tctctttagtagtctatttcataagaactccaca 374  Q
    ||| ||  ||||   |||||||||||||| ||||    
T  1464257 tcttttcggtagctcatttcataagaacttcaca 1464290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 280 - 375
Target Start/End: Complemental strand, 7678713 - 7678618
Alignment:
Q  280 catggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttctctttagtagtctatttcataagaactccacag 375  Q
    |||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||| ||  ||||  |||| ||||||||||||||||    
T  7678713 catggttgaaggaaggcttataagaattgttgggtactacctatatcaacaagatgcatcttcttttcggtagcttattccataagaactccacag 7678618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 251 - 343
Target Start/End: Original strand, 17628531 - 17628623
Alignment:
Q  251 gatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttct 343  Q
    |||||||||||| ||||| || |  ||| |||||||||||| | |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  17628531 gatcccgaggccatgcagataagtgatttcatggttgaaggtaggcttataagaattgtttggtactacctataccaacaagatgcatcttct 17628623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 282 - 374
Target Start/End: Complemental strand, 43929052 - 43928961
Alignment:
Q  282 tggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttctctttagtagtctatttcataagaactccaca 374  Q
    |||| ||||||||||||| ||||||||||||||||||| |||| |||||||||||||||||| ||| ||||| ||||||||||||| ||||||    
T  43929052 tggtcgaaggaaagcttacaagaattgtttggtactacatataccaacaagatgcatcttctttttggtagt-tatttcataagaaatccaca 43928961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 141 - 375
Target Start/End: Original strand, 27029188 - 27029421
Alignment:
Q  141 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 240  Q
    |||||||||| ||||||||||||||| |||||| |||||| |||| || ||| ||||||||||| || | |  ||||| ||    || ||||| ||| |     
T  27029188 tgtaacacccgaggctgacgagggcggggagtggtcgccaatgcacaatgtatgacaatgagcggcttctggtagcttataggaaaaccgaattacatca 27029287  T
Q  241 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 340  Q
    |||||| |||||| | | | || |||||| |||  | | || | |||||||||  |||||||||||| ||||||||||| ||||||||||||||||||||    
T  27029288 gaatgagagggattcgg-gaccatgcaggaatgagactacacgattgaaggaagacttataagaattatttggtactacttatatcaacaagatgcatct 27029386  T
Q  341 tctctttagtagtctatttcataagaactccacag 375  Q
    ||| ||  |||| | ||| ||||||||||||||||    
T  27029387 tcttttcggtagcccattccataagaactccacag 27029421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 281 - 343
Target Start/End: Complemental strand, 44470964 - 44470902
Alignment:
Q  281 atggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttct 343  Q
    ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  44470964 atggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttct 44470902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 170 - 320
Target Start/End: Complemental strand, 53855008 - 53854858
Alignment:
Q  170 agtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccggaatgatagggatcccgaggccgtgcagg 269  Q
    |||||| ||||||| | ||||  |||||||||||| ||||||||||||| || | ||| ||||||||| |||||||| |||||||  || || ||| |||    
T  53855008 agtgattgccagtgtacaaggctcgacaatgagcggctcccgacagcttatagacgaaccgaatcacatcggaatgagagggatcatgaagcagtgtagg 53854909  T
Q  270 tatggaattgcatggttgaaggaaagcttataagaattgtttggtactacc 320  Q
    ||||  | |  |||||||||||||  |||||||||||||||||||||||||    
T  53854908 tatgagactatatggttgaaggaagacttataagaattgtttggtactacc 53854858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 141 - 341
Target Start/End: Original strand, 27026414 - 27026613
Alignment:
Q  141 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 240  Q
    |||||| ||| |||||||||||  || |||||| ||| | ||||| |||| | |||||||||||||||| |  ||||| ||    || ||||||||| |     
T  27026414 tgtaacgcccgaggctgacgagaacggggagtggtcgtcggtgcacaaggcatgacaatgagcgactcctggtagcttttaggcaaaccgaatcacatca 27026513  T
Q  241 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 340  Q
    |||||| ||||||   | | | |||||||||||| | | || | ||||||||| |||||||||||||||||| |||||||||||||||||||||||||||    
T  27026514 gaatgagagggatattg-gacggtgcaggtatgggactacacgattgaaggaaggcttataagaattgtttgatactacctatatcaacaagatgcatct 27026612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 152 - 343
Target Start/End: Complemental strand, 31817617 - 31817426
Alignment:
Q  152 aggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccggaatgataggg 251  Q
    |||||||||||| || |||||| || |||||||| |||| | |||||||||||  ||||||||  || || |  |   |||||||| || ||| | ||||    
T  31817617 aggctgacgaggccggggagtggtcaccagtgcacaaggcatgacaatgagcggttcccgacaatttttagacaaggagaatcacatcgaaataagaggg 31817518  T
Q  252 atcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttct 343  Q
    |||  |||| |||||| |||||  | | |||||||||||||| | |||||| ||||||||||||||||||||| |||||| |||||||||||    
T  31817517 atcatgaggtcgtgcatgtatgagacttcatggttgaaggaacgtttataataattgtttggtactacctataccaacaaaatgcatcttct 31817426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 260 - 341
Target Start/End: Original strand, 13266115 - 13266196
Alignment:
Q  260 gccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatctt 341  Q
    ||||||||||||||| | |||||||||||||||| |||||||| |||| ||| ||||| |||||||||| ||||||||||||    
T  13266115 gccgtgcaggtatgggaatgcatggttgaaggaaggcttataataattttttagtactccctatatcaataagatgcatctt 13266196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 297 - 375
Target Start/End: Complemental strand, 50814899 - 50814821
Alignment:
Q  297 ttataagaattgtttggtactacctatatcaacaagatgcatcttctctttagtagtctatttcataagaactccacag 375  Q
    |||||||||||||||||||||| |||||||||||||||||||||||| ||  ||||   ||| ||||||||||||||||    
T  50814899 ttataagaattgtttggtactatctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacag 50814821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 230 - 375
Target Start/End: Original strand, 17029329 - 17029474
Alignment:
Q  230 gaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaac 329  Q
    |||| ||| |||||||| |||||||  |||| |||||| |||||| | ||||| |||||| |||  ||| ||| |||||||| |||||||||||||||||    
T  17029329 gaattacatcggaatgagagggatctagaggtcgtgcaagtatgggactgcatagttgaatgaagacttgtaataattgtttagtactacctatatcaac 17029428  T
Q  330 aagatgcatcttctctttagtagtctatttcataagaactccacag 375  Q
    ||||||||| ||   ||| |||   |||| ||||||||||||||||    
T  17029429 aagatgcatattacttttggtaccttattccataagaactccacag 17029474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 231 - 343
Target Start/End: Original strand, 41869918 - 41870030
Alignment:
Q  231 aatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaaca 330  Q
    ||||||| |||| ||| |||||||| ||| | || ||  ||||| | |||||| |||||||||  |||||||||||||| || |||||||||||||||||    
T  41869918 aatcacatcggagtgagagggatcctgagactgtacatatatgggactgcatgattgaaggaagacttataagaattgtatgatactacctatatcaaca 41870017  T
Q  331 agatgcatcttct 343  Q
    ||| |||||||||    
T  41870018 agacgcatcttct 41870030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 239 - 375
Target Start/End: Complemental strand, 52048798 - 52048663
Alignment:
Q  239 cggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcat 338  Q
    |||||||| |||| |||  ||||||| |||||||| || ||||| | |||||||||  |||||||||||||||| |||||| ||||  ||||||||||||    
T  52048798 cggaatgagagggttcctaaggccgtacaggtatgaaactgcatagctgaaggaaaatttataagaattgtttgatactacgtatactaacaagatgcat 52048699  T
Q  339 cttctctttagtagtctatttcataagaactccacag 375  Q
    ||||  |||   |||| ||| ||||||||||||||||    
T  52048698 cttcattttgtaagtc-attccataagaactccacag 52048663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 230 - 341
Target Start/End: Original strand, 17028873 - 17028984
Alignment:
Q  230 gaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaac 329  Q
    |||||||| |||||||| |||||||| || ||| |||| |||||| | ||||| |||||||||    || ||||||||||| ||| ||||||||||||||    
T  17028873 gaatcacatcggaatgagagggatcctgaagccttgcatgtatgggactgcatagttgaaggaggatttgtaagaattgttaggtgctacctatatcaac 17028972  T
Q  330 aagatgcatctt 341  Q
    ||||||| ||||    
T  17028973 aagatgcgtctt 17028984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 229 - 343
Target Start/End: Complemental strand, 13614039 - 13613925
Alignment:
Q  229 cgaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaa 328  Q
    |||||||||  ||||||| |||||||| ||||  ||||| | |||  | | |||||| ||||||   ||||||||||||||||| ||| |||||||||||    
T  13614039 cgaatcacaatggaatgagagggatccagaggttgtgcatgcatgagactccatggtagaaggagtacttataagaattgtttgataccacctatatcaa 13613940  T
Q  329 caagatgcatcttct 343  Q
    |||||||||||||||    
T  13613939 caagatgcatcttct 13613925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 295 - 341
Target Start/End: Complemental strand, 20306237 - 20306191
Alignment:
Q  295 gcttataagaattgtttggtactacctatatcaacaagatgcatctt 341  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||    
T  20306237 gcttataagaattgtttggtactatctatatcaacaagatgcatctt 20306191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 278 - 343
Target Start/End: Complemental strand, 23976312 - 23976247
Alignment:
Q  278 tgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttct 343  Q
    |||||| |||||||||   ||||||||||||||||||||||||||||  |||||||||||||||||    
T  23976312 tgcatgattgaaggaagagttataagaattgtttggtactacctatactaacaagatgcatcttct 23976247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 249 - 349
Target Start/End: Original strand, 17628986 - 17629086
Alignment:
Q  249 gggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttctcttta 348  Q
    |||||||  ||| ||||||||||||  | || |||||||||  ||| |||||||||||||||||||||||||||||  || ||||||| |||||| ||||    
T  17628986 gggatcctaaggtcgtgcaggtatgtgaatgtatggttgaataaaaacttataagaattgtttggtactacctatactaataagatgcctcttcttttta 17629085  T
Q  349 g 349  Q
    |    
T  17629086 g 17629086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 288 - 375
Target Start/End: Original strand, 4186224 - 4186311
Alignment:
Q  288 aaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttctctttagtagtctatttcataagaactccacag 375  Q
    |||||| ||||||||||||  |||||||||||||| || |||||||| |||||||| ||| |||| | ||| |||||||||| |||||    
T  4186224 aaggaatgcttataagaatgatttggtactacctacatgaacaagattcatcttctttttggtagcccattgcataagaactacacag 4186311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 280 - 375
Target Start/End: Original strand, 44831046 - 44831141
Alignment:
Q  280 catggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttctctttagtagtctatttcataagaactccacag 375  Q
    |||||||||||| |||||||||| ||||||||||||||||||| |  ||||||||| || |||| ||  |||| | |||||||| ||||| |||||    
T  44831046 catggttgaagggaagcttataaaaattgtttggtactacctaaactaacaagatgtatattcttttcggtagcccatttcatatgaacttcacag 44831141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 297 - 343
Target Start/End: Complemental strand, 27578531 - 27578485
Alignment:
Q  297 ttataagaattgtttggtactacctatatcaacaagatgcatcttct 343  Q
    ||||||||||| |||||| ||||||||||||||||||||||||||||    
T  27578531 ttataagaattatttggtgctacctatatcaacaagatgcatcttct 27578485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 300 - 374
Target Start/End: Original strand, 33764929 - 33765003
Alignment:
Q  300 taagaattgtttggtactacctatatcaacaagatgcatcttctctttagtagtctatttcataagaactccaca 374  Q
    ||||||||||||||| ||||||||| |||||||||||||||||| ||| ||||   |||| ||||||||| ||||    
T  33764929 taagaattgtttggtgctacctataccaacaagatgcatcttcttttttgtagctcattttataagaacttcaca 33765003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 241 - 375
Target Start/End: Complemental strand, 15306227 - 15306087
Alignment:
Q  241 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattg------tttggtactacctatatcaacaagat 334  Q
    |||||| |||||||| ||||| ||| |||||||| | | |||||| ||| |||  ||||||||| |||      ||||||||||||||||| ||||||||    
T  15306227 gaatgagagggatcctgaggctgtgtaggtatgggactacatggtcgaaagaagacttataagatttgagcaattttggtactacctatataaacaagat 15306128  T
Q  335 gcatcttctctttagtagtctatttcataagaactccacag 375  Q
    ||||||||| ||  ||||   ||| ||||||||||||||||    
T  15306127 gcatcttcttttcggtagctcattccataagaactccacag 15306087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 257 - 352
Target Start/End: Original strand, 4185741 - 4185836
Alignment:
Q  257 gaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttctctttagtag 352  Q
    |||||| ||||||||||  |  |||||||| ||||||  | ||||||||||||||| ||| || |||| |||||||||||||||||| ||| ||||    
T  4185741 gaggccatgcaggtatgagacggcatggttaaaggaatacatataagaattgtttgataccacatataccaacaagatgcatcttctttttggtag 4185836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 298 - 341
Target Start/End: Original strand, 42838690 - 42838733
Alignment:
Q  298 tataagaattgtttggtactacctatatcaacaagatgcatctt 341  Q
    ||||| |||||||||||||||||||||||||||| |||||||||    
T  42838690 tataaaaattgtttggtactacctatatcaacaaaatgcatctt 42838733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 298 - 343
Target Start/End: Complemental strand, 23091584 - 23091539
Alignment:
Q  298 tataagaattgtttggtactacctatatcaacaagatgcatcttct 343  Q
    ||||| |||||||||||||||| ||||| |||||||||||||||||    
T  23091584 tataaaaattgtttggtactacatatattaacaagatgcatcttct 23091539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 306 - 343
Target Start/End: Complemental strand, 39902518 - 39902481
Alignment:
Q  306 ttgtttggtactacctatatcaacaagatgcatcttct 343  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  39902518 ttgtttggtactatctatatcaacaagatgcatcttct 39902481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 285 - 369
Target Start/End: Original strand, 34554483 - 34554567
Alignment:
Q  285 ttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttctctttagtagtctatttcataagaact 369  Q
    ||||| ||| ||||||||||||||||||  |||||||||| || |||||||||| || | ||| |||| | ||| ||||||||||    
T  34554483 ttgaaagaatgcttataagaattgtttgacactacctataccagcaagatgcattttatttttggtagaccattccataagaact 34554567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 278 - 334
Target Start/End: Original strand, 53391934 - 53391990
Alignment:
Q  278 tgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagat 334  Q
    ||||||||||||| || |||||||| ||||||||| ||| | |||||||||||||||    
T  53391934 tgcatggttgaagaaatgcttataaaaattgtttgataccatctatatcaacaagat 53391990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 296 - 328
Target Start/End: Complemental strand, 27578984 - 27578952
Alignment:
Q  296 cttataagaattgtttggtactacctatatcaa 328  Q
    |||||||||||||||||||||||| ||||||||    
T  27578984 cttataagaattgtttggtactacatatatcaa 27578952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 239 - 343
Target Start/End: Original strand, 45682211 - 45682315
Alignment:
Q  239 cggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcat 338  Q
    |||||||| || ||||  |||||| ||||  ||||| | | |||| ||||| ||| | ||||||||||| ||||||| || ||||| |||||||||||||    
T  45682211 cggaatgagagagatcttgaggccatgcatatatgggactacatgattgaatgaaggtttataagaattatttggtattatctataccaacaagatgcat 45682310  T
Q  339 cttct 343  Q
     ||||    
T  45682311 tttct 45682315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 143; Significance: 5e-75; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 141 - 375
Target Start/End: Complemental strand, 20054316 - 20054082
Alignment:
Q  141 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 240  Q
    |||||||||||||||||||||||||| |||||| ||||| ||||| |||| ||||||||||||| |||| ||||||||||| | ||| ||||||||||||    
T  20054316 tgtaacacccaaggctgacgagggcggggagtggtcgccggtgcacaaggcacgacaatgagcggctcctgacagcttctagaggaaccgaatcacaccg 20054217  T
Q  241 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 340  Q
    |||||| |||| ||| |||||||||||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  20054216 gaatgagagggttcctgaggccgtgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatct 20054117  T
Q  341 tctctttagtagtctatttcataagaactccacag 375  Q
    ||| ||  ||||   ||| ||||||||||||||||    
T  20054116 tcttttcggtagctcattccataagaactccacag 20054082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 141 - 375
Target Start/End: Complemental strand, 20054772 - 20054538
Alignment:
Q  141 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 240  Q
    |||||||||||||||||||||||||| |||||| ||||| ||||| |||| ||||||||||||| |||| ||||||||||| | ||| ||||||||||||    
T  20054772 tgtaacacccaaggctgacgagggcggggagtggtcgccggtgcacaaggcacgacaatgagcggctcctgacagcttctagaggaaccgaatcacaccg 20054673  T
Q  241 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 340  Q
    |||||| |||| ||| |||||||||||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  20054672 gaatgagagggttcctgaggccgtgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatct 20054573  T
Q  341 tctctttagtagtctatttcataagaactccacag 375  Q
    ||| ||  ||||   ||| ||||||||||||||||    
T  20054572 tcttttcggtagctcattccataagaactccacag 20054538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 141 - 375
Target Start/End: Complemental strand, 20055228 - 20054994
Alignment:
Q  141 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 240  Q
    |||||||||||||||||||||||||| |||||| ||||| ||||| |||| ||||||||||||| |||| ||||||||||| | ||| ||||||||||||    
T  20055228 tgtaacacccaaggctgacgagggcggggagtggtcgccggtgcacaaggcacgacaatgagcggctcctgacagcttctagaggaaccgaatcacaccg 20055129  T
Q  241 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 340  Q
    |||||| |||| ||| |||||||||||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  20055128 gaatgagagggttcctgaggccgtgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatct 20055029  T
Q  341 tctctttagtagtctatttcataagaactccacag 375  Q
    ||| ||  ||||   ||| ||||||||||||||||    
T  20055028 tcttttcggtagctcattccataagaactccacag 20054994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 141 - 375
Target Start/End: Complemental strand, 20055684 - 20055450
Alignment:
Q  141 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 240  Q
    |||||||||||||||||||||||||| |||||| ||||| ||||| |||| ||||||||||||| |||| ||||||||||| | ||| ||||||||||||    
T  20055684 tgtaacacccaaggctgacgagggcggggagtggtcgccggtgcacaaggcacgacaatgagcggctcctgacagcttctagaggaaccgaatcacaccg 20055585  T
Q  241 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 340  Q
    |||||| |||| ||| |||||||||||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  20055584 gaatgagagggttcctgaggccgtgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatct 20055485  T
Q  341 tctctttagtagtctatttcataagaactccacag 375  Q
    ||| ||  ||||   ||| ||||||||||||||||    
T  20055484 tcttttcggtagctcattccataagaactccacag 20055450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 141 - 375
Target Start/End: Complemental strand, 20056140 - 20055906
Alignment:
Q  141 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 240  Q
    |||||||||||||||||||||||||| |||||| ||||| ||||| |||| ||||||||||||| |||| ||||||||||| | ||| ||||||||||||    
T  20056140 tgtaacacccaaggctgacgagggcggggagtggtcgccggtgcacaaggcacgacaatgagcggctcctgacagcttctagaggaaccgaatcacaccg 20056041  T
Q  241 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 340  Q
    |||||| |||| ||| |||||||||||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  20056040 gaatgagagggttcctgaggccgtgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatct 20055941  T
Q  341 tctctttagtagtctatttcataagaactccacag 375  Q
    ||| ||  ||||   ||| ||||||||||||||||    
T  20055940 tcttttcggtagctcattccataagaactccacag 20055906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 141 - 375
Target Start/End: Complemental strand, 20056596 - 20056362
Alignment:
Q  141 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 240  Q
    |||||||||||||||||||||||||| |||||| ||||| ||||| |||| ||||||||||||| |||| ||||||||||| | ||| ||||||||||||    
T  20056596 tgtaacacccaaggctgacgagggcggggagtggtcgccggtgcacaaggcacgacaatgagcggctcctgacagcttctagaggaaccgaatcacaccg 20056497  T
Q  241 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 340  Q
    |||||| |||| ||| |||||||||||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  20056496 gaatgagagggttcctgaggccgtgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatct 20056397  T
Q  341 tctctttagtagtctatttcataagaactccacag 375  Q
    ||| ||  ||||   ||| ||||||||||||||||    
T  20056396 tcttttcggtagctcattccataagaactccacag 20056362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 141 - 375
Target Start/End: Complemental strand, 20057499 - 20057265
Alignment:
Q  141 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 240  Q
    |||||||||||||||||||||||||| |||||| ||||| ||||| |||| ||||||||||||| |||| ||||||||||| | ||| ||||||||||||    
T  20057499 tgtaacacccaaggctgacgagggcggggagtggtcgccggtgcacaaggcacgacaatgagcggctcctgacagcttctagaggaaccgaatcacaccg 20057400  T
Q  241 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 340  Q
    |||||| |||| ||| |||||||||||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  20057399 gaatgagagggttcctgaggccgtgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatct 20057300  T
Q  341 tctctttagtagtctatttcataagaactccacag 375  Q
    ||| ||  ||||   ||| ||||||||||||||||    
T  20057299 tcttttcggtagctcattccataagaactccacag 20057265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 140 - 375
Target Start/End: Complemental strand, 16452170 - 16451935
Alignment:
Q  140 ttgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacacc 239  Q
    ||||||||||||||||||||||||||| |||||| ||||| ||||| |||| ||||||||||||| |||||||||||||||| | ||||||||||||| |    
T  16452170 ttgtaacacccaaggctgacgagggcggggagtggtcgccggtgcacaaggcacgacaatgagcggctcccgacagcttctagaggaatcgaatcacatc 16452071  T
Q  240 ggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatc 339  Q
    ||||||| |||||||| |||||| || ||||| || | | ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  16452070 ggaatgagagggatcctgaggccttgtaggtaggggactacatggttgaaggaaagcttataagaattgttgggtactacctatatcaacaagatgcatc 16451971  T
Q  340 ttctctttagtagtctatttcataagaactccacag 375  Q
    |||| ||  |||||  ||| ||||||||||||||||    
T  16451970 ttcttttcggtagttcattccataagaactccacag 16451935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 140 - 375
Target Start/End: Complemental strand, 16461323 - 16461088
Alignment:
Q  140 ttgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacacc 239  Q
    ||||||||||||||||||||||||||| |||||| ||||| ||||| |||| ||||||||||||| |||||||||||||||| | ||||||||||||| |    
T  16461323 ttgtaacacccaaggctgacgagggcggggagtggtcgccggtgcacaaggcacgacaatgagcggctcccgacagcttctagaggaatcgaatcacatc 16461224  T
Q  240 ggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatc 339  Q
    ||||||| |||||||| |||||| || ||||| || | | ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  16461223 ggaatgagagggatcctgaggccttgtaggtaggggactacatggttgaaggaaagcttataagaattgttgggtactacctatatcaacaagatgcatc 16461124  T
Q  340 ttctctttagtagtctatttcataagaactccacag 375  Q
    |||| ||  |||||  ||| ||||||||||||||||    
T  16461123 ttcttttcggtagttcattccataagaactccacag 16461088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 141 - 375
Target Start/End: Complemental strand, 20845897 - 20845663
Alignment:
Q  141 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 240  Q
    ||||||||||||||||||||||| || |||||| ||||| ||||| |||| ||||||||||||| |||| ||||||||||| | ||| ||||||||||||    
T  20845897 tgtaacacccaaggctgacgaggacggggagtggtcgccggtgcacaaggcacgacaatgagcggctcctgacagcttctagaggaaccgaatcacaccg 20845798  T
Q  241 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 340  Q
    |||||| | || ||| |||||||||||||||||  | |||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||    
T  20845797 gaatgagacggttcctgaggccgtgcaggtatgagactgcatggttgaaggaaggcttataagaattgtttgttactacctatatcaacaagatgcatct 20845698  T
Q  341 tctctttagtagtctatttcataagaactccacag 375  Q
    ||| ||  ||||   ||| ||||||||||||||||    
T  20845697 tcttttcggtagctcattccataagaactccacag 20845663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 141 - 375
Target Start/End: Complemental strand, 20057955 - 20057721
Alignment:
Q  141 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 240  Q
    |||||||||||||| ||||||||||| |||||| ||||| ||||| |||| ||||||||||||| ||||  |||||||||| | |||  |||||||||||    
T  20057955 tgtaacacccaaggttgacgagggcggggagtggtcgccggtgcacaaggcacgacaatgagcggctcctaacagcttctagaggaactgaatcacaccg 20057856  T
Q  241 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 340  Q
     ||||| |||| ||| |||||||||||||||||| | |||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  20057855 aaatgagagggttcctgaggccgtgcaggtatgggactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatct 20057756  T
Q  341 tctctttagtagtctatttcataagaactccacag 375  Q
    ||| ||  ||||   ||| ||||||||||||||||    
T  20057755 tcttttcggtagctcattccataagaactccacag 20057721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 141 - 342
Target Start/End: Original strand, 38340816 - 38341017
Alignment:
Q  141 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 240  Q
    |||||||||||||||||||||||| | |||||| || || ||||| |||| ||||||||||||| || | ||||||||||| | ||| ||||||||||||    
T  38340816 tgtaacacccaaggctgacgagggtggggagtggtcaccggtgcacaaggcacgacaatgagcggctactgacagcttctagaggaaccgaatcacaccg 38340915  T
Q  241 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 340  Q
    |||||| | || ||| |||||||||||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  38340916 gaatgagatggttcctgaggccgtgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatct 38341015  T
Q  341 tc 342  Q
    ||    
T  38341016 tc 38341017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 141 - 375
Target Start/End: Original strand, 52250116 - 52250350
Alignment:
Q  141 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 240  Q
    ||||| |||||||||||||||||||| |||| | ||||| ||||| |||| ||||||||||||| |||||||||||||||| | ||| ||||||||||||    
T  52250116 tgtaatacccaaggctgacgagggcggggagcggtcgccggtgcacaaggcacgacaatgagcggctcccgacagcttctagaggaaccgaatcacaccg 52250215  T
Q  241 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 340  Q
    |||||| |||||||  |||||| || |||||||| | | |||||| ||||||| |||||||||||||||| |||||||||||||||||||||||||||||    
T  52250216 gaatgagagggatcatgaggccttgtaggtatgggactacatggtcgaaggaaggcttataagaattgttgggtactacctatatcaacaagatgcatct 52250315  T
Q  341 tctctttagtagtctatttcataagaactccacag 375  Q
    ||| ||  ||||   ||| ||||||||||||||||    
T  52250316 tcttttcggtagctcattccataagaactccacag 52250350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 141 - 375
Target Start/End: Complemental strand, 43057759 - 43057525
Alignment:
Q  141 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 240  Q
    |||||||||||||||||| ||||||| ||| || ||||| ||||| |||| | | ||||||||| ||||||||||||| || | ||| ||||||||| ||    
T  43057759 tgtaacacccaaggctgaagagggcggggaatggtcgccggtgcacaaggcatgccaatgagcggctcccgacagcttttagaggaaccgaatcacatcg 43057660  T
Q  241 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 340  Q
    |||||| |||||||| ||||||||| |||||||  | | |||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||    
T  43057659 gaatgagagggatcctgaggccgtgtaggtatgagactacatggttgaaggaaggcttataagaattgtttggtactacctatattaacaagatgcatct 43057560  T
Q  341 tctctttagtagtctatttcataagaactccacag 375  Q
    ||| ||  |||| | ||| ||||||||||||||||    
T  43057559 tcttttcggtagcccattccataagaactccacag 43057525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 145 - 375
Target Start/End: Original strand, 12883438 - 12883668
Alignment:
Q  145 acacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccggaat 244  Q
    |||| ||||||| ||||||| |  ||||| ||| | ||||| |||| ||||||||||||| ||| |||||||||||| | ||| ||||||||||||||||    
T  12883438 acactcaaggctaacgagggtggtgagtggtcgtcggtgcacaaggcacgacaatgagcggctctcgacagcttctagacgaaccgaatcacaccggaat 12883537  T
Q  245 gatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttctc 344  Q
    || | |||||||||||| |||||||||||| | |||||| |||||||||  ||||||||||||||||||||||||||||||||||||||||||| ||||     
T  12883538 gagatggatcccgaggctgtgcaggtatgggactgcatgattgaaggaatacttataagaattgtttggtactacctatatcaacaagatgcattttctt 12883637  T
Q  345 tttagtagtctatttcataagaactccacag 375  Q
    ||| ||||   ||| ||||| ||||||||||    
T  12883638 tttggtagctcattccataaaaactccacag 12883668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 141 - 375
Target Start/End: Complemental strand, 51373110 - 51372876
Alignment:
Q  141 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 240  Q
    ||||||||||||| ||||||||| ||| ||||| | |||||||||||||| ||||||||||||||||||||||| |||||| | | | | ||||||||      
T  51373110 tgtaacacccaagactgacgaggacgaagagtggttgccagtgcataaggcacgacaatgagcgactcccgacatcttctagacgtaccaaatcacacta 51373011  T
Q  241 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 340  Q
    |||||| ||||||||||||||| | ||||||||  | || ||||||||||||| ||||||||||||||||| |||||||||||||| |||||||||||||    
T  51373010 gaatgagagggatcccgaggccatacaggtatgtgactgtatggttgaaggaaggcttataagaattgtttagtactacctatatcgacaagatgcatct 51372911  T
Q  341 tctctttagtagtctatttcataagaactccacag 375  Q
    | | ||  ||||   ||| ||||||||||||||||    
T  51372910 tattttcggtagctcattccataagaactccacag 51372876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 141 - 375
Target Start/End: Complemental strand, 20057043 - 20056818
Alignment:
Q  141 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 240  Q
    |||||||||||||||||||||||||| |||||| ||||| ||||| |||| ||||||||||||| |||| ||||||||||| | ||| ||||||||||||    
T  20057043 tgtaacacccaaggctgacgagggcggggagtggtcgccggtgcacaaggcacgacaatgagcggctcctgacagcttctagaggaaccgaatcacaccg 20056944  T
Q  241 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 340  Q
    |||||| |||| ||| |         |||||||| | |||| ||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||    
T  20056943 gaatgagagggttcctg---------aggtatgggactgcagggttgaaggaaggcttatgagaattgtttggtactacctatatcaacaagatgcatct 20056853  T
Q  341 tctctttagtagtctatttcataagaactccacag 375  Q
    ||| ||  ||||   ||| ||||||||||||||||    
T  20056852 tcttttcggtagctcattccataagaactccacag 20056818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 141 - 375
Target Start/End: Complemental strand, 43057300 - 43057067
Alignment:
Q  141 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 240  Q
    ||||||||||||||||||||||| || |||||| | ||| ||||| |||| | |||||||||||||||||||||  ||||| | ||| ||||||||| |     
T  43057300 tgtaacacccaaggctgacgaggacggggagtggttgccggtgcacaaggcatgacaatgagcgactcccgacaatttctagaggaaccgaatcacatca 43057201  T
Q  241 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 340  Q
    ||||||  |||||||  |||||||| |||||||  | | |||||||||||||| ||||| |||||||||||| |||||||||||||||||||||||||||    
T  43057200 gaatgag-gggatcctaaggccgtgtaggtatgtgactacatggttgaaggaaggcttagaagaattgtttgatactacctatatcaacaagatgcatct 43057102  T
Q  341 tctctttagtagtctatttcataagaactccacag 375  Q
    ||| ||  |||| | ||| ||||||||||||||||    
T  43057101 tcttttcggtagcccattccataagaactccacag 43057067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 140 - 374
Target Start/End: Complemental strand, 30873188 - 30872953
Alignment:
Q  140 ttgtaacacccaaggctgacgagggcgag--gagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcaca 237  Q
    |||||||| |||||||||||||||||| |  ||||| ||| | ||||| |||| ||||||||||||| || | ||||  ||||| | ||| |||||||||    
T  30873188 ttgtaacatccaaggctgacgagggcgcgtggagtggtcgtcggtgcacaaggcacgacaatgagcggcttc-gacaatttctagacgaaccgaatcaca 30873090  T
Q  238 ccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgca 337  Q
    ||||||||| |||||| | |||||||||||||||||  | || |||||||||||||  ||| ||||||||||||| ||||||||||||||||||||||||    
T  30873089 ccggaatgagagggattctgaggccgtgcaggtatgagactgtatggttgaaggaagacttttaagaattgtttgatactacctatatcaacaagatgca 30872990  T
Q  338 tcttctctttagtagtctatttcataagaactccaca 374  Q
    |||||| ||| |||||| |||  ||||||||||||||    
T  30872989 tcttctttttggtagtccattctataagaactccaca 30872953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 230 - 343
Target Start/End: Complemental strand, 35759755 - 35759642
Alignment:
Q  230 gaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaac 329  Q
    |||||||| |||||||| |||||||| |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35759755 gaatcacatcggaatgagagggatcctgaggccgtgcaggtatgggactgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaac 35759656  T
Q  330 aagatgcatcttct 343  Q
    ||||||||||||||    
T  35759655 aagatgcatcttct 35759642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 230 - 352
Target Start/End: Complemental strand, 35761061 - 35760939
Alignment:
Q  230 gaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaac 329  Q
    |||||||| |||||||| |||||||| |||||||||||||||||  | ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35761061 gaatcacatcggaatgagagggatcctgaggccgtgcaggtatgagactgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaac 35760962  T
Q  330 aagatgcatcttctctttagtag 352  Q
    |||||||||||||| ||| ||||    
T  35760961 aagatgcatcttctttttggtag 35760939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 230 - 375
Target Start/End: Complemental strand, 20061338 - 20061193
Alignment:
Q  230 gaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaac 329  Q
    |||||||| | |||||| |||||||| |||| ||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20061338 gaatcacatcagaatgagagggatcctgaggtcgtgcaggtatgggactgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaac 20061239  T
Q  330 aagatgcatcttctctttagtagtctatttcataagaactccacag 375  Q
    |||||||||||||| ||  ||||   ||| ||||||||||||||||    
T  20061238 aagatgcatcttcttttcggtagctcattccataagaactccacag 20061193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 194 - 343
Target Start/End: Complemental strand, 50002890 - 50002741
Alignment:
Q  194 gacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaa 293  Q
    ||||||||||| ||||||||| |||||| | ||  ||||||||| |||||||| || ||||| ||||||||| ||| |||| | ||||||||||||||||    
T  50002890 gacaatgagcggctcccgacatcttctagaggagccgaatcacatcggaatgagagagatcctgaggccgtgtaggcatgggactgcatggttgaaggaa 50002791  T
Q  294 agcttataagaattgtttggtactacctatatcaacaagatgcatcttct 343  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||    
T  50002790 ggcttataagaattgtttggtactacctatatcaacaagatgcatcttct 50002741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 141 - 352
Target Start/End: Complemental strand, 50003311 - 50003100
Alignment:
Q  141 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 240  Q
    ||||| ||| |||||||||||||||   ||||| ||| | ||||| |||| | || |||| ||| |||||||||||||||||| ||| ||||||||| ||    
T  50003311 tgtaatacctaaggctgacgagggcagagagtggtcgtcggtgcaaaaggcatgataatgtgcggctcccgacagcttctaaaggaaccgaatcacatcg 50003212  T
Q  241 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 340  Q
    |||||| |||||||| |||||| ||||||||| | | ||||||||| |||| |  ||||||| ||||||| |||||||||||||||||||||||||||||    
T  50003211 gaatgagagggatcctgaggccatgcaggtataggactgcatggttaaagggagacttataataattgttgggtactacctatatcaacaagatgcatct 50003112  T
Q  341 tctctttagtag 352  Q
    ||| || |||||    
T  50003111 tcttttcagtag 50003100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 257 - 375
Target Start/End: Original strand, 2328341 - 2328459
Alignment:
Q  257 gaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttctctttagtagtcta 356  Q
    |||||||| ||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||   |    
T  2328341 gaggccgtacaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatattaacaagatgcatcttctttttggtagcaca 2328440  T
Q  357 tttcataagaactccacag 375  Q
    || ||||||||||||||||    
T  2328441 ttccataagaactccacag 2328459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 141 - 343
Target Start/End: Complemental strand, 31822899 - 31822697
Alignment:
Q  141 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 240  Q
    ||||||||||| ||||||||| ||||||||| | ||||  ||||| |||| |||| |||||||| ||||| |||||||||| |  || | ||||||| |     
T  31822899 tgtaacacccacggctgacgatggcgaggagcggtcgctggtgcagaaggcacgataatgagcggctcccaacagcttctagagcaaccaaatcacatca 31822800  T
Q  241 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 340  Q
    |||||| |||||||  ||||||||| |||||||  | | ||||||||||||||   ||||||||||| ||||||||||| ||||||||||| ||||||||    
T  31822799 gaatgagagggatcatgaggccgtgtaggtatgagactacatggttgaaggaagatttataagaattatttggtactacatatatcaacaatatgcatct 31822700  T
Q  341 tct 343  Q
    |||    
T  31822699 tct 31822697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 229 - 375
Target Start/End: Complemental strand, 50002433 - 50002287
Alignment:
Q  229 cgaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaa 328  Q
    ||||||||| |||||||| |||||||  ||||||||| ||| |||| | | |||||||||||||| ||||||||||||||||||||||||||| ||||||    
T  50002433 cgaatcacatcggaatgagagggatcatgaggccgtgtaggcatgggactacatggttgaaggaaggcttataagaattgtttggtactacctttatcaa 50002334  T
Q  329 caagatgcatcttctctttagtagtctatttcataagaactccacag 375  Q
    ||||||||||||||| ||  ||||   ||| ||||||||||||||||    
T  50002333 caagatgcatcttcttttcggtagctcattccataagaactccacag 50002287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 226 - 343
Target Start/End: Original strand, 2634919 - 2635036
Alignment:
Q  226 aatcgaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatat 325  Q
    |||||||||||| |||||||| |||||||  ||||  |||||||||||| | ||||||||||||||| | || ||||||||||||||||||||||||||     
T  2634919 aatcgaatcacatcggaatgagagggatcatgaggttgtgcaggtatgggactgcatggttgaaggataactcataagaattgtttggtactacctatac 2635018  T
Q  326 caacaagatgcatcttct 343  Q
    ||||||||||||||||||    
T  2635019 caacaagatgcatcttct 2635036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 230 - 375
Target Start/End: Complemental strand, 46693883 - 46693737
Alignment:
Q  230 gaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgc-atggttgaaggaaagcttataagaattgtttggtactacctatatcaa 328  Q
    |||||||| |||||||| ||||||||  ||| |||||| |||||| | ||  ||||||||||||| |||||||| |||||||||||||||||||||||||    
T  46693883 gaatcacatcggaatgagagggatcctaaggtcgtgcatgtatgggactgtgatggttgaaggaaggcttataaaaattgtttggtactacctatatcaa 46693784  T
Q  329 caagatgcatcttctctttagtagtct-atttcataagaactccacag 375  Q
    ||||||||||||||| ||  ||| ||| ||||||||| ||||||||||    
T  46693783 caagatgcatcttcttttcggta-tctcatttcataataactccacag 46693737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 141 - 374
Target Start/End: Original strand, 7548003 - 7548234
Alignment:
Q  141 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 240  Q
    ||||||||||| | |||||||||||| || |||||| || ||||| |||| |||||||||| || |||| |||| |||| | |  ||  ||||||||  |    
T  7548003 tgtaacacccaggactgacgagggcggggggtgatcaccggtgcacaaggcacgacaatgaacggctcctgacaacttcgaca--aactgaatcacattg 7548100  T
Q  241 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 340  Q
     ||||| |||||||  ||||||||| |||||||  | | |||| || ||||||  ||||||| |||||||||||| || ||||||||||||||||||| |    
T  7548101 caatgagagggatcatgaggccgtgtaggtatgagactacatgattaaaggaagacttataaaaattgtttggtattaactatatcaacaagatgcatat 7548200  T
Q  341 tctctttagtagtctatttcataagaactccaca 374  Q
    ||| ||| |||| | |||| ||||||||||||||    
T  7548201 tctttttggtagcccatttgataagaactccaca 7548234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 140 - 341
Target Start/End: Original strand, 10820501 - 10820702
Alignment:
Q  140 ttgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacacc 239  Q
    ||||| ||||||||||||||||||  | | |||| ||||| ||||| || | | |||||||| || || |||||| |||||| ||||| ||||||||| |    
T  10820501 ttgtaccacccaaggctgacgaggatgggaagtggtcgccggtgcacaaagcatgacaatgaacggctaccgacaacttctagatgaaccgaatcacatc 10820600  T
Q  240 ggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatc 339  Q
    ||| ||| ||||||   ||||| ||| | |||| | | | ||||||||||||||   |||||||||||||||||||||||||||||||| ||||| ||||    
T  10820601 ggagtgagagggattatgaggcggtgtatgtattggactacatggttgaaggaagatttataagaattgtttggtactacctatatcaataagatacatc 10820700  T
Q  340 tt 341  Q
    ||    
T  10820701 tt 10820702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 263 - 372
Target Start/End: Original strand, 16907266 - 16907375
Alignment:
Q  263 gtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttctctttagtagtctatttcat 362  Q
    ||||||||||| || |||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| |||||||| || ||| ||| |||  |     
T  16907266 gtgcaggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatacatcttcttttcagtggtccattctac 16907365  T
Q  363 aagaactcca 372  Q
    ||||||||||    
T  16907366 aagaactcca 16907375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 286 - 375
Target Start/End: Complemental strand, 20060431 - 20060342
Alignment:
Q  286 tgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttctctttagtagtctatttcataagaactccacag 375  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  ||||   ||| ||||||||||||||||    
T  20060431 tgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacag 20060342  T

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Target: chr1; HSP #34
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 230 - 343
Target Start/End: Original strand, 23180729 - 23180842
Alignment:
Q  230 gaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaac 329  Q
    ||||||||  ||||||| |||||||  || |||||| ||| |||| | | | |||||||||||| | |||||||||||| ||||||||||||||||||||    
T  23180729 gaatcacattggaatgagagggatcttgaagccgtgtaggaatgggactacgtggttgaaggaatgattataagaattgcttggtactacctatatcaac 23180828  T
Q  330 aagatgcatcttct 343  Q
    |||||| |||||||    
T  23180829 aagatgtatcttct 23180842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 280 - 375
Target Start/End: Original strand, 12728040 - 12728136
Alignment:
Q  280 catggttgaaggaaagcttataagaattgtttgg-tactacctatatcaacaagatgcatcttctctttagtagtctatttcataagaactccacag 375  Q
    ||||||||||||||  |||||||||||||||||| |||| ||||||||||||||||||||||||| ||  ||||   ||| ||||||||||||||||    
T  12728040 catggttgaaggaagacttataagaattgtttggttactgcctatatcaacaagatgcatcttcttttcggtagcacattccataagaactccacag 12728136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 269 - 358
Target Start/End: Complemental strand, 16410831 - 16410742
Alignment:
Q  269 gtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttctctttagtagtctatt 358  Q
    |||||| | ||||| |||||||||||||||||||||||| |||  ||||||| ||| |||||||||||||||| | ||| |||| |||||    
T  16410831 gtatgggaatgcattgttgaaggaaagcttataagaattatttactactaccaataccaacaagatgcatcttgtttttggtagcctatt 16410742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 263 - 338
Target Start/End: Complemental strand, 46411248 - 46411173
Alignment:
Q  263 gtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcat 338  Q
    ||||| ||||| ||||||| |||||||| |||  || |||||||| |||||||||||||||||||| |||||||||    
T  46411248 gtgcatgtatgaaattgcacggttgaagaaaaatttttaagaattatttggtactacctatatcaataagatgcat 46411173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 288 - 369
Target Start/End: Original strand, 2739578 - 2739660
Alignment:
Q  288 aaggaaag-cttataagaattgtttggtactacctatatcaacaagatgcatcttctctttagtagtctatttcataagaact 369  Q
    |||||||| |||||||||||||||| | ||||| ||||||||||| ||| ||||||| |||  ||||||||| ||||||||||    
T  2739578 aaggaaagacttataagaattgtttagcactacatatatcaacaatatgtatcttcttttttatagtctattccataagaact 2739660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 276 - 369
Target Start/End: Original strand, 2634511 - 2634604
Alignment:
Q  276 attgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttctctttagtagtctatttcataagaact 369  Q
    |||||||| || |||||| ||||  |||||||||||||||||| |||||  ||||||||||||||||| ||   |||||||||  |||||||||    
T  2634511 attgcatgattaaaggaaggcttgcaagaattgtttggtactagctatacaaacaagatgcatcttcttttcgatagtctattcaataagaact 2634604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 280 - 352
Target Start/End: Complemental strand, 16440676 - 16440604
Alignment:
Q  280 catggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttctctttagtag 352  Q
    ||||||||||| ||  |||||||||| |||||| ||||||| ||| ||||||||||||| |||| ||| ||||    
T  16440676 catggttgaagaaagacttataagaactgtttgctactaccgataacaacaagatgcatattctttttggtag 16440604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 300 - 352
Target Start/End: Complemental strand, 31823161 - 31823109
Alignment:
Q  300 taagaattgtttggtactacctatatcaacaagatgcatcttctctttagtag 352  Q
    |||||||| |||||||||||||||||||| || ||||||||||| ||| ||||    
T  31823161 taagaattatttggtactacctatatcaataaaatgcatcttctttttggtag 31823109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 173
Target Start/End: Original strand, 9189351 - 9189384
Alignment:
Q  140 ttgtaacacccaaggctgacgagggcgaggagtg 173  Q
    ||||||||||||||||||||||||||| ||||||    
T  9189351 ttgtaacacccaaggctgacgagggcggggagtg 9189384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 136; Significance: 8e-71; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 136; E-Value: 8e-71
Query Start/End: Original strand, 140 - 375
Target Start/End: Complemental strand, 25338234 - 25337999
Alignment:
Q  140 ttgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacacc 239  Q
    |||||||||||||||||||||||||||||||||| ||||| ||||| |||| ||||||||||||| |||| ||||||||||| | |||  ||||||||||    
T  25338234 ttgtaacacccaaggctgacgagggcgaggagtggtcgccggtgcacaaggcacgacaatgagcggctcctgacagcttctagaggaactgaatcacacc 25338135  T
Q  240 ggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatc 339  Q
    ||||||| |||| ||| |||| ||||||||||||| | |||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||    
T  25338134 ggaatgagagggttcctgaggtcgtgcaggtatgggactgcatggttgaaggaaggcttataagaattgttgggtactacctatatcaacaagatgcatc 25338035  T
Q  340 ttctctttagtagtctatttcataagaactccacag 375  Q
    |||| ||   |||   ||||||||||||||||||||    
T  25338034 ttcttttcgatagctcatttcataagaactccacag 25337999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 141 - 375
Target Start/End: Original strand, 33174868 - 33175102
Alignment:
Q  141 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 240  Q
    |||||||||||||||||||||||||| |||||| ||||| ||||| |||| | ||||||||| | ||||||||| |||||| |  |  ||||||||| ||    
T  33174868 tgtaacacccaaggctgacgagggcggggagtggtcgccggtgcacaaggcatgacaatgagtggctcccgacaacttctagacaagccgaatcacatcg 33174967  T
Q  241 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 340  Q
    |||||| |||||||| ||||||||| |||||||| | | |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  33174968 gaatgagagggatcctgaggccgtgtaggtatgggactacatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatct 33175067  T
Q  341 tctctttagtagtctatttcataagaactccacag 375  Q
    ||| ||| ||||   ||||||||||||||||||||    
T  33175068 tctttttggtagctcatttcataagaactccacag 33175102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 140 - 375
Target Start/End: Complemental strand, 25434293 - 25434058
Alignment:
Q  140 ttgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacacc 239  Q
    ||||||||| ||||||||||||||||| ||||||  |||| ||||| |||| ||||||||||||| |||| ||||||||||||| ||| |||||||||||    
T  25434293 ttgtaacacacaaggctgacgagggcggggagtggccgccggtgcacaaggcacgacaatgagcggctcctgacagcttctaaacgaaccgaatcacacc 25434194  T
Q  240 ggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatc 339  Q
    ||||||| |||||||| |||||||||| ||||||| | | |||||||||||||| |||||||||||||||||| ||| |||| |||||||||||||||||    
T  25434193 ggaatgagagggatcctgaggccgtgctggtatgggacttcatggttgaaggaaggcttataagaattgtttgatacaacctttatcaacaagatgcatc 25434094  T
Q  340 ttctctttagtagtctatttcataagaactccacag 375  Q
    | || | | |||| | ||| ||||||||||||||||    
T  25434093 tcctttctggtagcccattccataagaactccacag 25434058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 140 - 375
Target Start/End: Original strand, 29804591 - 29804826
Alignment:
Q  140 ttgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacacc 239  Q
    |||||||||||||||||||||||| || |||||| ||||| ||||| |||| |||| |||||||| |||||||||||||||| | ||||||||||||| |    
T  29804591 ttgtaacacccaaggctgacgaggacggggagtggtcgccggtgcacaaggcacgataatgagcggctcccgacagcttctagaggaatcgaatcacatc 29804690  T
Q  240 ggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatc 339  Q
    ||||||| |||||||| |||||| || |||||||| | | |||||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||    
T  29804691 ggaatgagagggatcctgaggccttgtaggtatgggactacatggttgaaggcaggcttataagaattgttgggtactacctatatcaacaagatgcatc 29804790  T
Q  340 ttctctttagtagtctatttcataagaactccacag 375  Q
    |||| ||  ||||   ||| ||||||||||||||||    
T  29804791 ttcttttcggtagctcattccataagaactccacag 29804826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 141 - 375
Target Start/End: Original strand, 41754199 - 41754433
Alignment:
Q  141 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 240  Q
    |||||||||||||| ||||||||||| |||||| ||||| ||||| |||| ||||||||||||| |||| ||||||||||| | |||  |||||||||||    
T  41754199 tgtaacacccaaggatgacgagggcggggagtggtcgccggtgcacaaggcacgacaatgagcggctcctgacagcttctagaggaactgaatcacaccg 41754298  T
Q  241 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 340  Q
    |||||| |||| ||  |||||||||||||||||  | |||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||    
T  41754299 gaatgagagggttcttgaggccgtgcaggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactatctatatcaacaagatgcatct 41754398  T
Q  341 tctctttagtagtctatttcataagaactccacag 375  Q
    ||| ||  ||||   ||| ||||||||||||||||    
T  41754399 tcttttcggtagctcattccataagaactccacag 41754433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 141 - 375
Target Start/End: Original strand, 8256436 - 8256670
Alignment:
Q  141 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 240  Q
    |||||||||||||||||||||||| | |||||  ||||| ||||| |||| ||||||||||||| |||||||||||||||| | ||||| |||||| |||    
T  8256436 tgtaacacccaaggctgacgagggtggggagtagtcgccggtgcacaaggcacgacaatgagcggctcccgacagcttctagaggaatcaaatcacgccg 8256535  T
Q  241 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 340  Q
    |||||| |||||||  || ||| || |||||||| | | |||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||    
T  8256536 gaatgagagggatcttgaagccttgtaggtatgggactacatggttgaaggaaggcttataagaattgttgggtactacctatatcaacaagatgcatct 8256635  T
Q  341 tctctttagtagtctatttcataagaactccacag 375  Q
    ||| ||  ||||   ||| ||||||||||||||||    
T  8256636 tcttttcggtagctcattccataagaactccacag 8256670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 140 - 372
Target Start/End: Complemental strand, 18099116 - 18098883
Alignment:
Q  140 ttgtaacacccaaggctgacgagggc-gaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacac 238  Q
    |||||||||||| ||||||||||||| | |||||||||||| ||||| |||| ||||||||||||  ||||||||||||| || | ||| |||||||||     
T  18099116 ttgtaacacccacggctgacgagggcaggggagtgatcgccggtgcacaaggcacgacaatgagcagctcccgacagcttatagaggaaccgaatcacat 18099017  T
Q  239 cggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcat 338  Q
    |||||||| ||| |||| ||||||||| |||||||  | | |||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||    
T  18099016 cggaatgagaggaatcctgaggccgtgtaggtatgagactacatggttgaagggatgcttataagaattgtttggtactacctatatcaacaagatgcat 18098917  T
Q  339 cttctctttagtagtctatttcataagaactcca 372  Q
    ||||| ||| ||||   ||| |||||||||||||    
T  18098916 cttctttttggtagctcattccataagaactcca 18098883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 141 - 375
Target Start/End: Original strand, 16379302 - 16379537
Alignment:
Q  141 tgtaacacccaaggctgacgagggcgagg-agtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacacc 239  Q
    ||||||||||| |||||||||| || ||| |||| ||||| ||||| |||| ||||||||||||  ||||| |||| || |||| ||| ||||||| |      
T  16379302 tgtaacacccacggctgacgagagcaagggagtggtcgccggtgcacaaggcacgacaatgagcagctcccaacagtttataaacgaaccgaatcaaatt 16379401  T
Q  240 ggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatc 339  Q
    ||||||| ||||||||||||||||||||||||||| | ||||||||||||||||  |||||| |||||||||||||||||||||||||||||||||||||    
T  16379402 ggaatgagagggatcccgaggccgtgcaggtatgggactgcatggttgaaggaagacttatacgaattgtttggtactacctatatcaacaagatgcatc 16379501  T
Q  340 ttctctttagtagtctatttcataagaactccacag 375  Q
    |||| ||| ||||   ||| ||||||||||||||||    
T  16379502 ttctttttggtagcacattccataagaactccacag 16379537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 141 - 374
Target Start/End: Complemental strand, 27883162 - 27882929
Alignment:
Q  141 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 240  Q
    ||||||| ||||||||||||||| || |||||| ||||| ||||| |||| ||||||||||||| |||||| ||| ||||| | | | ||||||||||||    
T  27883162 tgtaacatccaaggctgacgaggacggggagtggtcgccggtgcacaaggcacgacaatgagcggctcccgtcagattctacacgtaccgaatcacaccg 27883063  T
Q  241 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 340  Q
     ||||| |||||||| ||||||||||| |||||  | ||||| |||||||||| ||||||||||||||||||||| || ||||||||| |||||||||||    
T  27883062 aaatgagagggatcctgaggccgtgcatgtatgagactgcattgttgaaggaatgcttataagaattgtttggtattatctatatcaataagatgcatct 27882963  T
Q  341 tctctttagtagtctatttcataagaactccaca 374  Q
    ||| ||| |||| |  || |||||||||||||||    
T  27882962 tcttttttgtaggccgttccataagaactccaca 27882929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 141 - 375
Target Start/End: Original strand, 33770920 - 33771145
Alignment:
Q  141 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 240  Q
    |||||||||||||||||||||||||| |||||| ||||| ||||| |||| ||||||||||||| |||| ||||||||||| | |||  |||||||||||    
T  33770920 tgtaacacccaaggctgacgagggcggggagtggtcgccggtgcacaaggcacgacaatgagcggctcctgacagcttctagaggaactgaatcacaccg 33771019  T
Q  241 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 340  Q
    |||||| |||| ||| ||||         ||||| | |||| |||||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  33771020 gaatgagagggttcctgagg---------tatgggactgcagggttgaagaaaggcttataagaattgtttggtactacctatatcaacaagatgcatct 33771110  T
Q  341 tctctttagtagtctatttcataagaactccacag 375  Q
    ||| ||  ||||   ||||||||||||||||||||    
T  33771111 tcttttcggtagctcatttcataagaactccacag 33771145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 138 - 343
Target Start/End: Original strand, 15619805 - 15620010
Alignment:
Q  138 cattgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcaca 237  Q
    |||||||||||||||| |||| ||| ||| |||||| ||||| ||||| |||| ||||||||||||| ||||||| ||||| || | ||| ||||| |||    
T  15619805 cattgtaacacccaagactgatgagagcggggagtggtcgccggtgcacaaggcacgacaatgagcggctcccgatagcttatagacgaaccgaattaca 15619904  T
Q  238 ccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgca 337  Q
     | |||||| ||||||||||| |||||||| |||||  | ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||| ||    
T  15619905 tcagaatgagagggatcccgatgccgtgcaagtatgagactgcatagttgaaggcaagcttataagaattgtttggtactacctatatcaacaagataca 15620004  T
Q  338 tcttct 343  Q
    ||||||    
T  15620005 tcttct 15620010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 144 - 375
Target Start/End: Original strand, 1706955 - 1707185
Alignment:
Q  144 aacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccggaa 243  Q
    ||||||||||||| ||||||||| |||||| ||| | ||||| |||| ||||||||||||| |||||||||  ||||| | ||| ||||||||| |||||    
T  1706955 aacacccaaggctaacgagggcggggagtggtcgtcggtgcacaaggcacgacaatgagcggctcccgacaatttctagaggaaccgaatcacatcggaa 1707054  T
Q  244 tgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttct 343  Q
    ||| ||| |||| ||| | ||| |||||||  | | |||| |||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  1707055 tgagagg-atcctgagactgtgtaggtatgagactacatgattgaaggaagacttataagaattgtttggtactacctatatcaacaagatgcatcttct 1707153  T
Q  344 ctttagtagtctatttcataagaactccacag 375  Q
     ||| |||| | || |||||||||||||||||    
T  1707154 ttttggtagcccatctcataagaactccacag 1707185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 141 - 371
Target Start/End: Original strand, 33174415 - 33174643
Alignment:
Q  141 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 240  Q
    ||||| |||||||||| |||| |||| |||||| ||||| |||||   || | ||||||||||| |||||||||||||||| | ||| ||||||||| ||    
T  33174415 tgtaatacccaaggctaacgaaggcggggagtggtcgccggtgcaaggggcatgacaatgagcggctcccgacagcttctagacgaaccgaatcacatcg 33174514  T
Q  241 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 340  Q
    |||||| |||||||| || |||||| |||||||| | | ||  |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  33174515 gaatgagagggatcctgatgccgtgtaggtatgggactaca--gttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatct 33174612  T
Q  341 tctctttagtagtctatttcataagaactcc 371  Q
    ||| ||  |||| | ||| ||||||||||||    
T  33174613 tcttttcggtagcccattccataagaactcc 33174643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 145 - 341
Target Start/End: Complemental strand, 18448150 - 18447954
Alignment:
Q  145 acacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccggaat 244  Q
    ||||| ||||||| |||||||| |||||| ||||| ||||| |||| |||||||||||||  |||||||||||| || | ||| ||||||||| ||||||    
T  18448150 acacctaaggctggcgagggcggggagtggtcgccggtgcacaaggcacgacaatgagcggttcccgacagcttttagaggaaccgaatcacatcggaat 18448051  T
Q  245 gatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatctt 341  Q
    ||||||||||| ||||||||| |||||||  | | ||||||||||| ||  |||||||||||||||||||||||| | |||||||||||||||||||    
T  18448050 gatagggatcctgaggccgtgtaggtatgtgactacatggttgaagtaagacttataagaattgtttggtactacttgtatcaacaagatgcatctt 18447954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 141 - 375
Target Start/End: Original strand, 1912434 - 1912668
Alignment:
Q  141 tgtaacacccaaggctgacgagggcgagg-agtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacacc 239  Q
    ||||||||||| || |||||||| | ||| |||||||||||||||| |||||||||||||||||| ||| | ||||||| || | |||  |||||||| |    
T  1912434 tgtaacacccacggttgacgaggacaagggagtgatcgccagtgcacaaggtacgacaatgagcggctctcaacagcttttagaggaactgaatcacatc 1912533  T
Q  240 ggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatc 339  Q
    ||||||| |||||||| ||||   || |||||||  | | |||||||||| | |   |||||||||||||||||||||||||||||||||||||||||||    
T  1912534 ggaatgagagggatcctgaggttatgtaggtatgagactacatggttgaaagtagatttataagaattgtttggtactacctatatcaacaagatgcatc 1912633  T
Q  340 ttctctttagtagtctatttcataagaactccacag 375  Q
    |||| ||| |||| | ||| ||||||||||||||||    
T  1912634 ttct-tttggtagcccattccataagaactccacag 1912668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 170 - 375
Target Start/End: Original strand, 16378877 - 16379081
Alignment:
Q  170 agtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccggaatgatagggatcccgaggccgtgcagg 269  Q
    |||| ||||| |||||||||  |||||||||||||  |||  |||| || || ||||| ||| |||||||||||||| |||||| ||||||||||||| |    
T  16378877 agtggtcgccggtgcataagacacgacaatgagcggttcctaacagtttatagatgaaccga-tcacaccggaatgagagggattccgaggccgtgcaag 16378975  T
Q  270 tatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttctctttagtagtctatttcataagaact 369  Q
    ||||  | ||||||||||||||||  |||||| |||||||||| |||||||||||||||||||||||||||||| ||| ||||   ||| ||||||||||    
T  16378976 tatgagactgcatggttgaaggaagtcttatacgaattgtttgatactacctatatcaacaagatgcatcttctttttggtagcacattccataagaact 16379075  T
Q  370 ccacag 375  Q
    ||||||    
T  16379076 ccacag 16379081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 230 - 343
Target Start/End: Original strand, 30966233 - 30966346
Alignment:
Q  230 gaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaac 329  Q
    ||||| || |||||||| |||||||| |||||||| ||||||||| | |||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  30966233 gaatcgcatcggaatgagagggatcctgaggccgtacaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaac 30966332  T
Q  330 aagatgcatcttct 343  Q
    ||||||||||||||    
T  30966333 aagatgcatcttct 30966346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 230 - 375
Target Start/End: Original strand, 24818325 - 24818470
Alignment:
Q  230 gaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaac 329  Q
    |||||||| |||||||| |||||||| ||||||||||| |||||| | ||||||||| |||||| ||||||||||||||||| |||||||||||||||||    
T  24818325 gaatcacatcggaatgagagggatcctgaggccgtgcatgtatgggactgcatggttcaaggaaggcttataagaattgtttagtactacctatatcaac 24818424  T
Q  330 aagatgcatcttctctttagtagtctatttcataagaactccacag 375  Q
    |||||||||||| | ||  ||||   ||| ||||||||||||||||    
T  24818425 aagatgcatctttttttcggtagctcattccataagaactccacag 24818470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 230 - 375
Target Start/End: Original strand, 30966689 - 30966834
Alignment:
Q  230 gaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaac 329  Q
    ||||| || |||||||| |||||||| |||||||| || |||||| | |||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  30966689 gaatcgcatcggaatgagagggatcctgaggccgtacatgtatgggactgcatggttgaaggaaggattataagaattgtttggtactacctatatcaac 30966788  T
Q  330 aagatgcatcttctctttagtagtctatttcataagaactccacag 375  Q
    |||||||||||||| ||  ||||   ||| ||||||||||||||||    
T  30966789 aagatgcatcttcttttcggtagctcattccataagaactccacag 30966834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 138 - 343
Target Start/End: Original strand, 15639647 - 15639846
Alignment:
Q  138 cattgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcaca 237  Q
    |||||||||||||||| |||| ||| ||| |||||| ||||| ||||| |||| ||||||||||||| ||||||| ||||| || | ||| ||||| |||    
T  15639647 cattgtaacacccaagactgatgagagcggggagtggtcgccggtgcacaaggcacgacaatgagcggctcccgatagcttatagacgaaccgaattaca 15639746  T
Q  238 ccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgca 337  Q
     | |||||| |||||||||||||| ||| | |||      ||||| |||||||| | ||||||| ||||||||||||||||||||||||||||| || ||    
T  15639747 tcagaatgagagggatcccgaggctgtggaagta------tgcatagttgaaggcacgcttataggaattgtttggtactacctatatcaacaacataca 15639840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 141 - 375
Target Start/End: Complemental strand, 38899148 - 38898914
Alignment:
Q  141 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 240  Q
    |||||||| |||| |||||||||||| |||||| |||   |||||||||  | || |||||| | ||||||||| |||||| |  |  | ||||||| ||    
T  38899148 tgtaacactcaagactgacgagggcggggagtggtcgttggtgcataagacatgaaaatgagtggctcccgacaacttctagacaagccaaatcacatcg 38899049  T
Q  241 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 340  Q
    ||| || || ||||  ||||||||| ||||||   | | ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |    
T  38899048 gaaggagagtgatcttgaggccgtgtaggtatcagactacatggttgaaggagagcttataagaattgtttggtactacctatatcaacaagatgcattt 38898949  T
Q  341 tctctttagtagtctatttcataagaactccacag 375  Q
    ||| ||| |||    ||||||||||||||||||||    
T  38898948 tctttttggtaacacatttcataagaactccacag 38898914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 229 - 354
Target Start/End: Original strand, 1953153 - 1953278
Alignment:
Q  229 cgaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaa 328  Q
    ||||||||| |||||||| |||||||| || | ||||||||||||  | ||||||||||||||||  | |||||||||||||||||||||||||||||||    
T  1953153 cgaatcacatcggaatgagagggatcctgaagtcgtgcaggtatgagactgcatggttgaaggaagacctataagaattgtttggtactacctatatcaa 1953252  T
Q  329 caagatgcatcttctctttagtagtc 354  Q
    | ||||||||||||| ||| ||||||    
T  1953253 ctagatgcatcttctttttggtagtc 1953278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 230 - 369
Target Start/End: Complemental strand, 29259767 - 29259628
Alignment:
Q  230 gaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaac 329  Q
    |||||||| |||||||| |||||||| ||| |||| || |||||| | |||||||||||||||| |||||| | |||||||||||||||| |||||||||    
T  29259767 gaatcacatcggaatgagagggatcctgagaccgtacaagtatgggactgcatggttgaaggaaggcttattaaaattgtttggtactacatatatcaac 29259668  T
Q  330 aagatgcatcttctctttagtagtctatttcataagaact 369  Q
    |||||||||||||| ||  ||||   ||||||||||||||    
T  29259667 aagatgcatcttcttttcggtagctcatttcataagaact 29259628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 230 - 343
Target Start/End: Complemental strand, 5399964 - 5399851
Alignment:
Q  230 gaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaac 329  Q
    |||||||| |||||||| |||||||  |||| |||||| |||||| | || |||||| |||| | |||||||||||||||||||||||||||||||||||    
T  5399964 gaatcacatcggaatgagagggatcttgaggtcgtgcaagtatgggagtgtatggtttaagggaggcttataagaattgtttggtactacctatatcaac 5399865  T
Q  330 aagatgcatcttct 343  Q
    ||||||||||||||    
T  5399864 aagatgcatcttct 5399851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 233 - 374
Target Start/End: Original strand, 20502023 - 20502165
Alignment:
Q  233 tcacaccggaatgatagggatcccga--ggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaaca 330  Q
    |||||||||||||| ||||||||| |  || |||||| |||||| | |||||||||||||||| |||||||||||||||||||||||  |||||||||||    
T  20502023 tcacaccggaatgagagggatcccaaaaggtcgtgcaagtatgggactgcatggttgaaggaaggcttataagaattgtttggtactttctatatcaaca 20502122  T
Q  331 agatgcatcttctctttagtagtctatttcataagaactccaca 374  Q
    |||||| |||| | ||| |||| | |||||||||||||| ||||    
T  20502123 agatgcttctt-tttttggtagcccatttcataagaacttcaca 20502165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 141 - 271
Target Start/End: Complemental strand, 18098798 - 18098667
Alignment:
Q  141 tgtaacacccaaggctgacgagggc-gaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacacc 239  Q
    ||||||||||| ||||||||||||| | |||||||||||| ||||| |||| |||||| |||||| ||||||||||||| || | ||||||||||||| |    
T  18098798 tgtaacacccacggctgacgagggcaggggagtgatcgccggtgcacaaggcacgacattgagcggctcccgacagcttatagaggaatcgaatcacatc 18098699  T
Q  240 ggaatgatagggatcccgaggccgtgcaggta 271  Q
    ||||||| ||| | || ||||||||| |||||    
T  18098698 ggaatgagaggaaccctgaggccgtgtaggta 18098667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 240 - 343
Target Start/End: Complemental strand, 30963857 - 30963754
Alignment:
Q  240 ggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatc 339  Q
    ||||||| |||||||  || |||||||||||| |  | ||||||||||||||||| |||||||||||||| |||| ||||||||||||||||||||||||    
T  30963857 ggaatgagagggatcatgaagccgtgcaggtaagagaatgcatggttgaaggaaaacttataagaattgtatggttctacctatatcaacaagatgcatc 30963758  T
Q  340 ttct 343  Q
    ||||    
T  30963757 ttct 30963754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 229 - 375
Target Start/End: Original strand, 11388187 - 11388331
Alignment:
Q  229 cgaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaa 328  Q
    ||||||||| |||||||| ||| |||| || |||||| |||||||  | | |||||||||||||| ||||| || |||||||||||||||||||||||||    
T  11388187 cgaatcacatcggaatgagagg-atcctgatgccgtgtaggtatgagactacatggttgaaggaatgcttaaaa-aattgtttggtactacctatatcaa 11388284  T
Q  329 caagatgcatcttctctttagtagtctatttcataagaactccacag 375  Q
    ||||||||||||||| ||  ||||   ||| ||||||||||||||||    
T  11388285 caagatgcatcttcttttcggtagctcattccataagaactccacag 11388331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 278 - 372
Target Start/End: Original strand, 13191021 - 13191115
Alignment:
Q  278 tgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttctctttagtagtctatttcataagaactcca 372  Q
    ||||||||| ||||||  |||||||||||||||||||||||| |||| |||||||||||||||||| ||| |||||| |||| ||||||||||||    
T  13191021 tgcatggttcaaggaagacttataagaattgtttggtactacatataccaacaagatgcatcttctttttggtagtccattttataagaactcca 13191115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 283 - 372
Target Start/End: Original strand, 8073944 - 8074033
Alignment:
Q  283 ggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttctctttagtagtctatttcataagaactcca 372  Q
    ||||||||| |  ||||||||||||||||||||||||||||| |||||||||||||||||| | | |||| | |||||||||||||||||    
T  8073944 ggttgaagggagacttataagaattgtttggtactacctataccaacaagatgcatcttctttcttgtagcccatttcataagaactcca 8074033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 250 - 375
Target Start/End: Original strand, 11394554 - 11394677
Alignment:
Q  250 ggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttctctttag 349  Q
    |||||| || |||||| |||||||  | | |||||||||||||| ||||| || |||||||||||||||||||||||||||||||||||||||| ||  |    
T  11394554 ggatcctgatgccgtgtaggtatgagactacatggttgaaggaatgcttaaaa-aattgtttggtactacctatatcaacaagatgcatcttcttttcgg 11394652  T
Q  350 tagtctatttcataagaactccacag 375  Q
    ||| ||||| |||||||||| |||||    
T  11394653 tag-ctattccataagaacttcacag 11394677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 278 - 341
Target Start/End: Complemental strand, 30963362 - 30963299
Alignment:
Q  278 tgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatctt 341  Q
    |||||| ||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||    
T  30963362 tgcatgattgaaggaaggcttataagaattgttaggtactacctatatcaacaagatgcatctt 30963299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 226 - 338
Target Start/End: Complemental strand, 30962042 - 30961922
Alignment:
Q  226 aatcgaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaagga-------aag-cttataagaattgtttggtact 317  Q
    |||||||||||| | |||||| || ||||| || |||||| |||||||| |||||||||||||||||       ||| ||||||||| ||| ||||||||    
T  30962042 aatcgaatcacatcagaatgagagagatcctgaagccgtgtaggtatgggattgcatggttgaaggatttaaggaagtcttataagatttgattggtact 30961943  T
Q  318 acctatatcaacaagatgcat 338  Q
    |||||||||||||||||||||    
T  30961942 acctatatcaacaagatgcat 30961922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 242 - 375
Target Start/End: Original strand, 83028 - 83161
Alignment:
Q  242 aatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatctt 341  Q
    ||||| |||||||| |||   |||||||||||  | | |||||||||||| | |||||||||||| ||||||||||||||||| |||||||||| |||||    
T  83028 aatgagagggatcctgagattgtgcaggtatgagactacatggttgaaggtatgcttataagaatcgtttggtactacctataccaacaagatgaatctt 83127  T
Q  342 ctctttagtagtctatttcataagaactccacag 375  Q
     | ||| ||||   ||| ||||||||||| ||||    
T  83128 ttttttggtagctcattccataagaactctacag 83161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 212 - 341
Target Start/End: Original strand, 16541966 - 16542095
Alignment:
Q  212 acagcttctaaatgaatcgaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgttt 311  Q
    ||||||||||  |||  ||||||||| | ||||||||||||||||   || ||| |||||||    | ||||||||||||||  ||||||| ||||||||    
T  16541966 acagcttctaggtgagccgaatcacatcagaatgatagggatcccagagctgtgtaggtatgactctacatggttgaaggaagacttataataattgttt 16542065  T
Q  312 ggtactacctatatcaacaagatgcatctt 341  Q
     ||||||||||||||||||||||| |||||    
T  16542066 tgtactacctatatcaacaagatgtatctt 16542095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 282 - 334
Target Start/End: Complemental strand, 8181446 - 8181394
Alignment:
Q  282 tggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagat 334  Q
    ||||||||||||  ||| |||||||||||||||||||||||||||||||||||    
T  8181446 tggttgaaggaagacttttaagaattgtttggtactacctatatcaacaagat 8181394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 282 - 343
Target Start/End: Complemental strand, 36924519 - 36924456
Alignment:
Q  282 tggttgaaggaaagcttataagaattgtttggtactac--ctatatcaacaagatgcatcttct 343  Q
    |||||||||||| ||||||||||||||||||||| |||   |||||||||||||||||||||||    
T  36924519 tggttgaaggaaggcttataagaattgtttggtattacttatatatcaacaagatgcatcttct 36924456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 288 - 342
Target Start/End: Complemental strand, 26864905 - 26864851
Alignment:
Q  288 aaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttc 342  Q
    |||||| |||| |||||| | |||||||||||||| ||| |||||||||||||||    
T  26864905 aaggaaggcttgtaagaactctttggtactacctacatcgacaagatgcatcttc 26864851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 128; Significance: 4e-66; HSPs: 47)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 140 - 343
Target Start/End: Original strand, 39653073 - 39653276
Alignment:
Q  140 ttgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacacc 239  Q
    |||||||||||||||||||||||| || |||||| ||||| ||||| |||| ||||||||||||| |||| ||||||||||| | |||  ||||||||||    
T  39653073 ttgtaacacccaaggctgacgaggacggggagtggtcgccggtgcacaaggcacgacaatgagcggctcctgacagcttctagaggaactgaatcacacc 39653172  T
Q  240 ggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatc 339  Q
    ||||||| |||| ||| |||||||||||||||||| | ||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||    
T  39653173 ggaatgagagggttcctgaggccgtgcaggtatgggactgcatggttgaaggaaagcttataagaattgttggatactacctatatcaacaagatgcatc 39653272  T
Q  340 ttct 343  Q
    ||||    
T  39653273 ttct 39653276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 141 - 375
Target Start/End: Complemental strand, 11180269 - 11180036
Alignment:
Q  141 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 240  Q
    |||||||||||||||||| ||||||| |||||| ||||| ||||| |||||||||||||||||| |||||||||||||||| | ||| |||||||  |||    
T  11180269 tgtaacacccaaggctgaagagggcggggagtggtcgccggtgcacaaggtacgacaatgagcggctcccgacagcttctagaggaaccgaatcag-ccg 11180171  T
Q  241 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 340  Q
    |||||| |||||||| |||||| || |||||||| | | |||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||    
T  11180170 gaatgagagggatcctgaggccttgtaggtatgggactacatggttgaaggaaggcttataagaattgttgggtactacctatatcaacaagatgcatct 11180071  T
Q  341 tctctttagtagtctatttcataagaactccacag 375  Q
    ||| ||  ||||   ||||||||||||||||||||    
T  11180070 tcttttcggtagctcatttcataagaactccacag 11180036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 141 - 375
Target Start/End: Original strand, 28561656 - 28561890
Alignment:
Q  141 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 240  Q
    ||||||||||||| |||||||||||| |||||| ||||| ||||| |||| ||||||||||||| || | |||| |||||| | |||  |||||||||||    
T  28561656 tgtaacacccaagactgacgagggcggggagtggtcgccggtgcacaaggcacgacaatgagcggctactgacaacttctagaggaactgaatcacaccg 28561755  T
Q  241 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 340  Q
    |||||| |||| ||| |||||||||||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  28561756 gaatgagagggttcctgaggccgtgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatct 28561855  T
Q  341 tctctttagtagtctatttcataagaactccacag 375  Q
    ||| ||  ||||   ||| ||||||||||||||||    
T  28561856 tcttttcggtagctcattccataagaactccacag 28561890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 143 - 375
Target Start/End: Original strand, 50347658 - 50347890
Alignment:
Q  143 taacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccgga 242  Q
    |||||||||||||||||||||||| |||||||||||| ||||| |||| ||||||||||||| |||||||||||||||| | ||| |||||||| |||||    
T  50347658 taacacccaaggctgacgagggcggggagtgatcgccggtgcacaaggaacgacaatgagcggctcccgacagcttctagaggaaccgaatcacgccgga 50347757  T
Q  243 atgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttc 342  Q
    |||| |||||||| |||||| || | |||||  | | | |||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||    
T  50347758 atgagagggatcctgaggccttgtatgtatgagactacttggttgaaggaaggcttataagaattgttgggtactacctatatcaacaagatgcatcttc 50347857  T
Q  343 tctttagtagtctatttcataagaactccacag 375  Q
    | ||| ||||   ||| ||||||||||||||||    
T  50347858 tttttggtagctcattccataagaactccacag 50347890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 141 - 343
Target Start/End: Original strand, 16811291 - 16811493
Alignment:
Q  141 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 240  Q
    |||||||||||||||||||||||| | |||||| ||||| ||||| |||| ||||||||||||| |||||||||||||||| | ||||||||||||| ||    
T  16811291 tgtaacacccaaggctgacgagggtggggagtggtcgccggtgcacaaggcacgacaatgagcggctcccgacagcttctagaggaatcgaatcacatcg 16811390  T
Q  241 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 340  Q
    |||||| |||||||| ||||||||| |||| ||| | | |||||||||||||| |||||||||||||||| |||||||||||| ||||||||||||||||    
T  16811391 gaatgagagggatcctgaggccgtgtaggtttgggactccatggttgaaggaaggcttataagaattgttgggtactacctatttcaacaagatgcatct 16811490  T
Q  341 tct 343  Q
    |||    
T  16811491 tct 16811493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 141 - 375
Target Start/End: Complemental strand, 13150334 - 13150101
Alignment:
Q  141 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 240  Q
    |||||||||||||||||| ||||||| |||||| ||||| ||||| |||| ||||||||||||| ||| |||||||||||| | ||| |||||||| |||    
T  13150334 tgtaacacccaaggctgatgagggcggggagtg-tcgccggtgcacaaggcacgacaatgagcggctctcgacagcttctagaggaaccgaatcacgccg 13150236  T
Q  241 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 340  Q
    |||||| |||| ||| |||||| || |||||||| | | |||||||||||||| |||||||||||||||| |||||||||| ||||||||||||||||||    
T  13150235 gaatgagagggctcctgaggccttgtaggtatgggactacatggttgaaggaaggcttataagaattgttgggtactacctgtatcaacaagatgcatct 13150136  T
Q  341 tctctttagtagtctatttcataagaactccacag 375  Q
    ||| || |||||   ||| ||||||||||||||||    
T  13150135 tcttttcagtagctcattccataagaactccacag 13150101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 154 - 375
Target Start/End: Complemental strand, 32227444 - 32227223
Alignment:
Q  154 gctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccggaatgatagggat 253  Q
    ||||||||||||| |||||| ||||||||||| |||| || |||||||||| ||||| ||| |||||| | ||| |||||||| ||||||||| ||||||    
T  32227444 gctgacgagggcggggagtggtcgccagtgcacaaggcacaacaatgagcggctcccaacaacttctagaggaaccgaatcacgccggaatgagagggat 32227345  T
Q  254 cccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttctctttagtagt 353  Q
    ||  ||||| || |||||||| | | |||||||||||||| |||||||||||||||| |||||||||||||| ||||||||||||||||| ||| ||||     
T  32227344 cctaaggccttgtaggtatgggactacatggttgaaggaaggcttataagaattgttgggtactacctatattaacaagatgcatcttctttttggtagc 32227245  T
Q  354 ctatttcataagaactccacag 375  Q
      ||||||||||||||||||||    
T  32227244 tcatttcataagaactccacag 32227223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 139 - 343
Target Start/End: Original strand, 14813857 - 14814061
Alignment:
Q  139 attgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacac 238  Q
    |||||||||| |||||||||||||||||||||||| ||||| ||||| |||| |||||||| |||| || | || |||||||| | ||| ||||||||||    
T  14813857 attgtaacacacaaggctgacgagggcgaggagtggtcgccggtgcacaaggcacgacaattagcggcttctgagagcttctagaggaaccgaatcacac 14813956  T
Q  239 cggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcat 338  Q
    |||||||| |||| ||| ||||||||| |||||||  | ||||||||| |||||| |||||||| ||||||||||||||||||||||||| |||||||||    
T  14813957 cggaatgagagggttcctgaggccgtgtaggtatgagactgcatggttaaaggaaggcttataataattgtttggtactacctatatcaataagatgcat 14814056  T
Q  339 cttct 343  Q
    |||||    
T  14814057 cttct 14814061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 146 - 343
Target Start/End: Original strand, 16810840 - 16811037
Alignment:
Q  146 cacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccggaatg 245  Q
    |||| |||||||||||||||| |||||| ||||| ||||| |||| ||||||||||||| |||||||||||||||| | ||||||||||||| |||||||    
T  16810840 caccgaaggctgacgagggcggggagtggtcgccggtgcacaaggcacgacaatgagcggctcccgacagcttctagaggaatcgaatcacatcggaatg 16810939  T
Q  246 atagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttct 343  Q
    | |||||||  ||||||||| || ||||| | ||||||||||| |||| ||||||||||||||||  |||||| ||||||| ||||||||||||||||    
T  16810940 agagggatcttgaggccgtgtagatatgggactgcatggttgatggaaggcttataagaattgttgcgtactaactatatctacaagatgcatcttct 16811037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 141 - 375
Target Start/End: Original strand, 37044944 - 37045179
Alignment:
Q  141 tgtaacacccaaggctgacgagggc-gaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacacc 239  Q
    |||||||||||  |||||||||||| | |||||| || || ||||| |||| ||| ||||||||| |||||||||||||||| | ||| ||||||||| |    
T  37044944 tgtaacacccacagctgacgagggcaggggagtggtcaccggtgcacaaggcacgccaatgagcggctcccgacagcttctagaggaaccgaatcacatc 37045043  T
Q  240 ggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatc 339  Q
     |||||| |||||||| ||||||||| |||| ||| | | ||||  |||||||| ||||||||||||||||||||| |||||||||||||||| ||||||    
T  37045044 tgaatgagagggatcctgaggccgtgtaggtgtgggactacatgaatgaaggaatgcttataagaattgtttggtaatacctatatcaacaaggtgcatc 37045143  T
Q  340 ttctctttagtagtctatttcataagaactccacag 375  Q
    |||| ||| |||  ||||| ||||||||||||||||    
T  37045144 ttctttttggtaccctattccataagaactccacag 37045179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 152 - 369
Target Start/End: Original strand, 30529608 - 30529825
Alignment:
Q  152 aggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccggaatgataggg 251  Q
    |||||||||||||||| ||||| ||| ||||||| |||| |||||||| |||  ||||||||| |||||| | |||  |||||||| |||||||| ||||    
T  30529608 aggctgacgagggcgatgagtggtcgtcagtgcacaaggcacgacaataagcagctcccgacaacttctagaggaactgaatcacatcggaatgagaggg 30529707  T
Q  252 atcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttctctttagta 351  Q
    |||| ||||| ||| |||||||  | | ||||||||||| || ||||||||||||| ||||||||||||||||||||||||||||||||||| ||| |||    
T  30529708 atcctgaggctgtgtaggtatgagactacatggttgaagtaaggcttataagaattttttggtactacctatatcaacaagatgcatcttctttttggta 30529807  T
Q  352 gtctatttcataagaact 369  Q
    | | ||| ||||||||||    
T  30529808 gcccattccataagaact 30529825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 140 - 375
Target Start/End: Complemental strand, 32797171 - 32796937
Alignment:
Q  140 ttgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacacc 239  Q
    ||||||||||||||||| ||||||||| |||||| ||||| ||||| ||| || |||||||| || |||||||||||||||| |  |  ||||||||| |    
T  32797171 ttgtaacacccaaggctaacgagggcgtggagtggtcgccggtgcacaag-tatgacaatgaacggctcccgacagcttctagacaagccgaatcacatc 32797073  T
Q  240 ggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatc 339  Q
    | ||| | |||||||| ||| || || ||||||| || | ||||||||||| ||  ||||||||||||||||||||||||||||||||||||||||||||    
T  32797072 gaaataagagggatcctgagaccatgtaggtatgaaactacatggttgaagcaagacttataagaattgtttggtactacctatatcaacaagatgcatc 32796973  T
Q  340 ttctctttagtagtctatttcataagaactccacag 375  Q
    |||| ||| ||||   ||| ||||||||||||||||    
T  32796972 ttcttttttgtagcacattccataagaactccacag 32796937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 201 - 375
Target Start/End: Complemental strand, 25239253 - 25239079
Alignment:
Q  201 agcgactcccgacagcttctaaatgaatcgaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttat 300  Q
    |||| |||||||||||||||| | ||||||||||||||||| |||| |||||| | |||| |||| |||||||| | |  ||||||||||||| ||||||    
T  25239253 agcggctcccgacagcttctagaggaatcgaatcacaccggtatgagagggattctgaggtcgtgtaggtatgggactatatggttgaaggaacgcttat 25239154  T
Q  301 aagaattgtttggtactacctatatcaacaagatgcatcttctctttagtagtctatttcataagaactccacag 375  Q
    ||||||| ||||||||||||||||||||||||||||||||||| ||| |||| | ||| ||||||||||||||||    
T  25239153 aagaattttttggtactacctatatcaacaagatgcatcttctttttggtagcccattccataagaactccacag 25239079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 144 - 375
Target Start/End: Complemental strand, 25230482 - 25230250
Alignment:
Q  144 aacacccaaggctgacgagggcgagg-agtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccgga 242  Q
    ||||||||  |||||||||||  ||| |||||| ||| ||||| |||| ||||||||||||| ||||||||| ||| || | ||| | ||||||| ||||    
T  25230482 aacacccacagctgacgagggaaagggagtgatagccggtgcacaaggcacgacaatgagcggctcccgacatcttatagaggaaccaaatcacatcgga 25230383  T
Q  243 atgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttc 342  Q
    | || |||||||| |||| |||| |||||||| | | |||||||||||||| ||||||||||||| |||||||||||||||||||||||||| |||||||    
T  25230382 aggagagggatcctgaggtcgtgtaggtatgggactacatggttgaaggaaggcttataagaattatttggtactacctatatcaacaagatacatcttc 25230283  T
Q  343 tctttagtagtctatttcataagaactccacag 375  Q
    | ||| |||| | |||  |||||||||||||||    
T  25230282 tttttggtagcccattcaataagaactccacag 25230250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 144 - 375
Target Start/End: Complemental strand, 25238069 - 25237837
Alignment:
Q  144 aacacccaaggctgacgagggcgagg-agtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccgga 242  Q
    ||||||||  |||||||||||  ||| |||||| ||| ||||| |||| ||||||||||||| ||||||||| ||| || | ||| | ||||||| ||||    
T  25238069 aacacccacagctgacgagggaaagggagtgatagccggtgcacaaggcacgacaatgagcggctcccgacatcttatagaggaaccaaatcacatcgga 25237970  T
Q  243 atgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttc 342  Q
    | || |||||||| |||| |||| |||||||| | | |||||||||||||| ||||||||||||| |||||||||||||||||||||||||| |||||||    
T  25237969 aggagagggatcctgaggtcgtgtaggtatgggactacatggttgaaggaaggcttataagaattatttggtactacctatatcaacaagatacatcttc 25237870  T
Q  343 tctttagtagtctatttcataagaactccacag 375  Q
    | ||| |||| | |||  |||||||||||||||    
T  25237869 tttttggtagcccattcaataagaactccacag 25237837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 187 - 375
Target Start/End: Original strand, 32227457 - 32227644
Alignment:
Q  187 aaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggtt 286  Q
    |||| ||||||||||||| |||||||||||||||| | ||| |||||||| ||||||||| |||||||  |||||| || |||||||| | | |||||||    
T  32227457 aaggcacgacaatgagcggctcccgacagcttctagaggaaccgaatcacgccggaatgagagggatct-gaggccttgtaggtatgggactacatggtt 32227555  T
Q  287 gaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttctctttagtagtctatttcataagaactccacag 375  Q
    ||||||| |||||||||||||||| |||||||||||||| ||||||||||||||||| ||  ||||   ||||||||||||||||||||    
T  32227556 gaaggaaggcttataagaattgttgggtactacctatattaacaagatgcatcttcttttcggtagctcatttcataagaactccacag 32227644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 141 - 375
Target Start/End: Original strand, 2911005 - 2911239
Alignment:
Q  141 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 240  Q
    |||||||||||||  |||||||| || |||||| ||||| ||||| |||  |||| ||| ||||  |||  |||||||||| | ||| |||||||||||     
T  2911005 tgtaacacccaagattgacgaggacggggagtggtcgccggtgcacaagacacgataataagcggatcctaacagcttctagacgaaccgaatcacacct 2911104  T
Q  241 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 340  Q
    |||||| ||||||||||||||||||||||||||| |   |||||||||| ||| | |||||| ||||||||| || |||||||||||||||||||||| |    
T  2911105 gaatgagagggatcccgaggccgtgcaggtatgggaccacatggttgaaagaatggttataaaaattgtttgatattacctatatcaacaagatgcatat 2911204  T
Q  341 tctctttagtagtctatttcataagaactccacag 375  Q
    ||| ||| ||||   ||| ||||||||||||||||    
T  2911205 tctttttggtagctcattccataagaactccacag 2911239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 168 - 374
Target Start/End: Complemental strand, 20885325 - 20885120
Alignment:
Q  168 ggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccggaatgatagggatcccgaggccgtgca 267  Q
    |||||||||||| ||||| |||| ||| ||||||||| ||||||||| |||||| | ||| | ||||||| || ||||| |||||||  |||| |||| |    
T  20885325 ggagtgatcgccggtgcacaaggcacgccaatgagcggctcccgacaacttctagaggaacc-aatcacatcgcaatgagagggatcttgaggtcgtgta 20885227  T
Q  268 ggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttctctttagtagtctatttcataagaa 367  Q
    ||||||  | | ||||||||||||||  ||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||   ||| ||||||||    
T  20885226 ggtatgtgactacatggttgaaggaagacttataagaattgtttgatactacctatatcaacaagatgcatcttctttttagtagcacattccataagaa 20885127  T
Q  368 ctccaca 374  Q
    |||||||    
T  20885126 ctccaca 20885120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 168 - 370
Target Start/End: Complemental strand, 25230914 - 25230712
Alignment:
Q  168 ggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccggaatgatagggatcccgaggccgtgca 267  Q
    ||||||||| || ||||| |||| ||||||||||||  ||||||||||||| || | ||| | |||||||  ||||||| |||||||| |||||| || |    
T  25230914 ggagtgatctccggtgcacaaggcacgacaatgagcagctcccgacagcttatagaggaaccaaatcacattggaatgagagggatcctgaggccatgta 25230815  T
Q  268 ggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttctctttagtagtctatttcataagaa 367  Q
    ||||||  | | |||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| |||| ||| |||| | ||| ||||||||    
T  25230814 ggtatgagactacatggttgaaggaaggtttataagaattgtttggtactacctatatcaacaagatgcattttctttttggtagcccattccataagaa 25230715  T
Q  368 ctc 370  Q
    |||    
T  25230714 ctc 25230712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 168 - 370
Target Start/End: Complemental strand, 25238501 - 25238299
Alignment:
Q  168 ggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccggaatgatagggatcccgaggccgtgca 267  Q
    ||||||||| || ||||| |||| ||||||||||||  ||||||||||||| || | ||| | |||||||  ||||||| |||||||| |||||| || |    
T  25238501 ggagtgatctccggtgcacaaggcacgacaatgagcagctcccgacagcttatagaggaaccaaatcacattggaatgagagggatcctgaggccatgta 25238402  T
Q  268 ggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttctctttagtagtctatttcataagaa 367  Q
    ||||||  | | |||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| |||| ||| |||| | ||| ||||||||    
T  25238401 ggtatgagactacatggttgaaggaaggtttataagaattgtttggtactacctatatcaacaagatgcattttctttttggtagcccattccataagaa 25238302  T
Q  368 ctc 370  Q
    |||    
T  25238301 ctc 25238299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 230 - 375
Target Start/End: Complemental strand, 31284423 - 31284278
Alignment:
Q  230 gaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaac 329  Q
    |||||||| |||||||| |||||||  |||| ||||||||||||| | |||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  31284423 gaatcacatcggaatgagagggatcttgaggtcgtgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaac 31284324  T
Q  330 aagatgcatcttctctttagtagtctatttcataagaactccacag 375  Q
    |||||||||||||| ||  ||||   ||| ||||||||||||||||    
T  31284323 aagatgcatcttcttttcggtagctcattccataagaactccacag 31284278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 194 - 375
Target Start/End: Original strand, 39640900 - 39641081
Alignment:
Q  194 gacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaa 293  Q
    |||||||| || ||||||||||||| || | ||||||||||||| | |||||| || ||||| ||||||||| |||||||  | | ||||||||||||||    
T  39640900 gacaatgaacggctcccgacagcttttagaagaatcgaatcacatcagaatgagagagatcctgaggccgtgtaggtatgagactacatggttgaaggaa 39640999  T
Q  294 agcttataagaattgtttggtactacctatatcaacaagatgcatcttctctttagtagtctatttcataagaactccacag 375  Q
      ||||||||| ||||||||||||||||||||||| |||||||||||||| ||| ||||   ||| ||||||||||||||||    
T  39641000 gacttataagagttgtttggtactacctatatcaataagatgcatcttctttttggtagctcattccataagaactccacag 39641081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 230 - 373
Target Start/End: Original strand, 25248110 - 25248253
Alignment:
Q  230 gaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaac 329  Q
    |||||||| |||||||| |||||| |  ||||||||||||||||| | ||||||||| |||||| | |||||||||||||||||||||||||||||||||    
T  25248110 gaatcacatcggaatgagagggattctaaggccgtgcaggtatgggactgcatggttaaaggaatgtttataagaattgtttggtactacctatatcaac 25248209  T
Q  330 aagatgcatcttctctttagtagtctatttcataagaactccac 373  Q
    |||||||||||||| ||| |||| | ||| ||||| ||||||||    
T  25248210 aagatgcatcttctttttggtagcccattccataataactccac 25248253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 230 - 341
Target Start/End: Original strand, 8067279 - 8067390
Alignment:
Q  230 gaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaac 329  Q
    |||||||| |||||||| ||||| || |||||||||||||||||| ||||||||||||||||   ||||||||||||||||| |||||||||||||||||    
T  8067279 gaatcacatcggaatgagagggaccctgaggccgtgcaggtatgggattgcatggttgaaggccggcttataagaattgtttagtactacctatatcaac 8067378  T
Q  330 aagatgcatctt 341  Q
    ||||||||||||    
T  8067379 aagatgcatctt 8067390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 230 - 373
Target Start/End: Original strand, 41472300 - 41472442
Alignment:
Q  230 gaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaac 329  Q
    |||||||| |||||||| |||||||| |||| ||| ||||||||  | |||||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  41472300 gaatcacatcggaatgagagggatcctgaggtcgtacaggtatgagactgcatggttgaaggaa-gcttataagaattgtttggtactacatatatcaac 41472398  T
Q  330 aagatgcatcttctctttagtagtctatttcataagaactccac 373  Q
    |||||||||||||| ||  ||||   ||| ||||||||||||||    
T  41472399 aagatgcatcttcttttcggtagatcattccataagaactccac 41472442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 187 - 341
Target Start/End: Original strand, 14820110 - 14820264
Alignment:
Q  187 aaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggtt 286  Q
    |||| |||| |||||||| |||| ||||||||||| | ||| |||||||||||| ||||| |||| ||| ||| ||||| ||||||||   |||| || |    
T  14820110 aaggcacgataatgagcggctcctgacagcttctagaggaaccgaatcacaccgcaatgagagggttcctgagcccgtgtaggtatggggctgcacggct 14820209  T
Q  287 gaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatctt 341  Q
     |||||| ||||||||||||||||||||||||| |||||||||||||||||||||    
T  14820210 aaaggaaggcttataagaattgtttggtactacttatatcaacaagatgcatctt 14820264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 141 - 371
Target Start/End: Complemental strand, 25803240 - 25803010
Alignment:
Q  141 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 240  Q
    ||||||||||||||||||| ||| || |||||| ||||  ||||| |||| |  |||||||||| || || |||||||||| ||||| ||||||| | ||    
T  25803240 tgtaacacccaaggctgactaggacggggagtggtcgctggtgcacaaggcataacaatgagcggcttccaacagcttctagatgaaccgaatcatatcg 25803141  T
Q  241 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 340  Q
    |||| | |||| |||  | | |||| |||||||| | ||||||||||||| ||  ||| |||||||||||||||||||||||||  ||||||||| ||||    
T  25803140 gaataagagggttcctaatgtcgtgtaggtatgggactgcatggttgaagtaagacttgtaagaattgtttggtactacctataaaaacaagatgtatct 25803041  T
Q  341 tctctttagtagtctatttcataagaactcc 371  Q
    ||| ||  |||  | ||||||||||||||||    
T  25803040 tcttttcggtatcccatttcataagaactcc 25803010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 261 - 375
Target Start/End: Complemental strand, 32386850 - 32386736
Alignment:
Q  261 ccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttctctttagtagtctatttc 360  Q
    |||||||||||||| | || ||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||   ||| |    
T  32386850 ccgtgcaggtatgggactgtatggttgaaggaaggcttataagaattgtttggtactacctatattaacaagatgcatcttcttttcagtagctaattcc 32386751  T
Q  361 ataagaactccacag 375  Q
    |||||||||||||||    
T  32386750 ataagaactccacag 32386736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 230 - 375
Target Start/End: Complemental strand, 27187477 - 27187332
Alignment:
Q  230 gaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaac 329  Q
    ||||||||  ||||||| |||||||| ||||| ||||| |||||| | ||||||||| || ||| |||||||||||||||||||||||||||||||||      
T  27187477 gaatcacattggaatgagagggatcctgaggctgtgcatgtatgggactgcatggttaaatgaaggcttataagaattgtttggtactacctatatcact 27187378  T
Q  330 aagatgcatcttctctttagtagtctatttcataagaactccacag 375  Q
    |||||||||||||| ||  ||||   ||||||||||||||||||||    
T  27187377 aagatgcatcttcttttcggtagctcatttcataagaactccacag 27187332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 231 - 343
Target Start/End: Original strand, 7477191 - 7477303
Alignment:
Q  231 aatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaaca 330  Q
    ||||||| |||||||| ||||||||  | | ||||||||||||  | |||||||||||||||| ||||||||||||| ||||||||||| ||||||||||    
T  7477191 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 7477290  T
Q  331 agatgcatcttct 343  Q
    |||| ||||||||    
T  7477291 agatacatcttct 7477303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 231 - 343
Target Start/End: Original strand, 7493881 - 7493993
Alignment:
Q  231 aatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaaca 330  Q
    ||||||| |||||||| || |||||  | | ||||||||||||  | |||||||||||||||| ||||||||||||| ||||||||||| ||||||||||    
T  7493881 aatcacatcggaatgagagagatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 7493980  T
Q  331 agatgcatcttct 343  Q
    |||||||||||||    
T  7493981 agatgcatcttct 7493993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 280 - 375
Target Start/End: Complemental strand, 13150651 - 13150556
Alignment:
Q  280 catggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttctctttagtagtctatttcataagaactccacag 375  Q
    |||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||| ||  ||||   ||| ||||||||||||||||    
T  13150651 catggttgaaggaaggcttataagaattgttgggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacag 13150556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 280 - 375
Target Start/End: Complemental strand, 25238781 - 25238686
Alignment:
Q  280 catggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttctctttagtagtctatttcataagaactccacag 375  Q
    ||||||||||||||  ||||||||||||||||||||||| || ||||||||||||||||||||| ||| |||| | ||| ||||||||||||||||    
T  25238781 catggttgaaggaagacttataagaattgtttggtactatctttatcaacaagatgcatcttctttttggtagcccattccataagaactccacag 25238686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 283 - 375
Target Start/End: Complemental strand, 4067454 - 4067362
Alignment:
Q  283 ggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttctctttagtagtctatttcataagaactccacag 375  Q
    |||||||||||  ||||||| |||||||||||||||||||||||||||||||||||||||| ||| ||||   ||| ||||||||||||||||    
T  4067454 ggttgaaggaagacttataaaaattgtttggtactacctatatcaacaagatgcatcttctttttggtagctcattacataagaactccacag 4067362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 278 - 343
Target Start/End: Original strand, 29224371 - 29224436
Alignment:
Q  278 tgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttct 343  Q
    ||||||||||||||||  |||||||||||||||||||||||||||||  |||||||||||||||||    
T  29224371 tgcatggttgaaggaagacttataagaattgtttggtactacctatactaacaagatgcatcttct 29224436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 141 - 238
Target Start/End: Original strand, 39653530 - 39653627
Alignment:
Q  141 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacac 238  Q
    |||||||||||||||||||||||| | |||||| ||||| ||||| |||| ||||||||||||| |||| ||||||||||| | |||  |||||||||    
T  39653530 tgtaacacccaaggctgacgagggtggggagtggtcgccggtgcacaaggcacgacaatgagcggctcctgacagcttctagaggaactgaatcacac 39653627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 266 - 338
Target Start/End: Complemental strand, 47518430 - 47518358
Alignment:
Q  266 caggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcat 338  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||  |||| || || |||||||||||||    
T  47518430 caggtatggaattgcatggttgaaggaaaacttataagaattgtttgaaactatctctaccaacaagatgcat 47518358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 240 - 343
Target Start/End: Complemental strand, 25802685 - 25802582
Alignment:
Q  240 ggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatc 339  Q
    ||||||| |||||||  | |||| || |||||||  | ||||||||| | |||| ||| |||||||| ||||||||||||||||||||||||||||||||    
T  25802685 ggaatgagagggatcatgtggccatgtaggtatgagactgcatggttaacggaaggctgataagaatggtttggtactacctatatcaacaagatgcatc 25802586  T
Q  340 ttct 343  Q
    ||||    
T  25802585 ttct 25802582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 140 - 274
Target Start/End: Complemental strand, 13155438 - 13155307
Alignment:
Q  140 ttgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacacc 239  Q
    ||||||||||||| ||||||||||||| |||||| ||||| ||||| |||| |||||||||||||  || |||||||||||| | ||| |||||||| ||    
T  13155438 ttgtaacacccaatgctgacgagggcggggagtg-tcgccggtgcacaaggcacgacaatgagcg-gtctcgacagcttctagaggaaccgaatcacgcc 13155341  T
Q  240 ggaatgatagggatcccgaggccgtgcaggtatgg 274  Q
    | ||||| | |||||| |||||| || ||||||||    
T  13155340 gaaatgaga-ggatcctgaggccttgtaggtatgg 13155307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 140 - 221
Target Start/End: Original strand, 970875 - 970956
Alignment:
Q  140 ttgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttcta 221  Q
    |||||||||||||||| | |||||||| |||||| | ||||| ||| |||||||||||||||||| |||| |||| ||||||    
T  970875 ttgtaacacccaaggccggcgagggcggggagtggttgccagggcacaaggtacgacaatgagcggctcctgacaacttcta 970956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 230 - 334
Target Start/End: Original strand, 41473996 - 41474100
Alignment:
Q  230 gaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaac 329  Q
    |||||||| || ||||| |||||||  |||| ||| ||||||||  | || |||||| ||||||  ||||||||||||||||| |||| |||||||||||    
T  41473996 gaatcacatcgaaatgagagggatcttgaggtcgttcaggtatgtgactggatggttaaaggaagacttataagaattgtttgatacttcctatatcaac 41474095  T
Q  330 aagat 334  Q
    |||||    
T  41474096 aagat 41474100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 266 - 352
Target Start/End: Complemental strand, 31104071 - 31103985
Alignment:
Q  266 caggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttctctttagtag 352  Q
    ||||||||  ||||||||||| ||||||  ||||||||||||||||| ||||| ||||| |||| |||||||| |||| ||| ||||    
T  31104071 caggtatgagattgcatggttcaaggaagacttataagaattgtttgatactatctataccaactagatgcattttctttttggtag 31103985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 299 - 341
Target Start/End: Original strand, 3890046 - 3890088
Alignment:
Q  299 ataagaattgtttggtactacctatatcaacaagatgcatctt 341  Q
    |||||||||||||| |||||| |||||||||||||||||||||    
T  3890046 ataagaattgtttgctactacatatatcaacaagatgcatctt 3890088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 299 - 341
Target Start/End: Original strand, 3899868 - 3899910
Alignment:
Q  299 ataagaattgtttggtactacctatatcaacaagatgcatctt 341  Q
    ||||||||||||||||||||| |||| ||||||||||||||||    
T  3899868 ataagaattgtttggtactacatataccaacaagatgcatctt 3899910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 141 - 185
Target Start/End: Complemental strand, 25238907 - 25238863
Alignment:
Q  141 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgca 185  Q
    |||||||||||||||||||||||||| |||||| ||||| |||||    
T  25238907 tgtaacacccaaggctgacgagggcggggagtggtcgccggtgca 25238863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 276 - 343
Target Start/End: Complemental strand, 26310090 - 26310023
Alignment:
Q  276 attgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttct 343  Q
    |||||||||||||||||    ||||||||||| |||| |||||| |||| ||| ||||||||||||||    
T  26310090 attgcatggttgaaggacgatttataagaattttttgttactacatataccaaaaagatgcatcttct 26310023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 230 - 290
Target Start/End: Original strand, 12820643 - 12820703
Alignment:
Q  230 gaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaag 290  Q
    |||||||| |||||||| |||||| |  ||||||| ||||||||| | |||||||||||||    
T  12820643 gaatcacatcggaatgagagggattctaaggccgtacaggtatgggactgcatggttgaag 12820703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 127; Significance: 2e-65; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 141 - 375
Target Start/End: Original strand, 1130 - 1364
Alignment:
Q  141 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 240  Q
    |||||||||||||||||||||||||| |||||| ||||| ||||| |||| ||||||||||||| |||| |||| |||||| | ||| ||||||||||||    
T  1130 tgtaacacccaaggctgacgagggcggggagtggtcgccggtgcacaaggcacgacaatgagcggctcctgacaacttctagaggaaccgaatcacaccg 1229  T
Q  241 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 340  Q
    |||||| | || ||| |||||| ||||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||    
T  1230 gaatgagacggttcctgaggccatgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatataaacaagatgcatct 1329  T
Q  341 tctctttagtagtctatttcataagaactccacag 375  Q
    ||| ||  ||||   ||| ||||||||||||||||    
T  1330 tcttttcggtagctcattccataagaactccacag 1364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 127; Significance: 2e-65; HSPs: 49)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 141 - 375
Target Start/End: Complemental strand, 34405827 - 34405593
Alignment:
Q  141 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 240  Q
    |||||||||||||||||||||||||| |||||| ||||| ||||| |||| ||||||||||||| |||||||||||||||| | ||| ||||||||||||    
T  34405827 tgtaacacccaaggctgacgagggcggggagtggtcgccggtgcacaaggcacgacaatgagcggctcccgacagcttctagaggaaccgaatcacaccg 34405728  T
Q  241 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 340  Q
    |||||| ||||||||  ||||| || |||||||| | | |||||||||||||| |||||||||||||||| ||||||||||||||||||| |||||||||    
T  34405727 gaatgagagggatcctaaggccttgtaggtatgggactacatggttgaaggaaggcttataagaattgttgggtactacctatatcaacaggatgcatct 34405628  T
Q  341 tctctttagtagtctatttcataagaactccacag 375  Q
    ||| ||  ||||   ||| ||||||||||||||||    
T  34405627 tcttttcggtagctcattccataagaactccacag 34405593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 141 - 375
Target Start/End: Original strand, 2189054 - 2189288
Alignment:
Q  141 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 240  Q
    |||||||| ||||| ||||||||||| |||||| ||||| ||||| |||| ||||||||||||| |||| ||||||||||| | ||| ||||||||||||    
T  2189054 tgtaacactcaaggatgacgagggcggggagtggtcgccggtgcacaaggcacgacaatgagcggctcctgacagcttctagaggaaccgaatcacaccg 2189153  T
Q  241 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 340  Q
    |||||| |||| ||| ||||| |||||||| ||| | |||||||||||| ||| ||||||||||||||||||| ||||||||||||||||||||||||||    
T  2189154 gaatgagagggttcctgaggctgtgcaggtgtgggactgcatggttgaaagaaggcttataagaattgtttggcactacctatatcaacaagatgcatct 2189253  T
Q  341 tctctttagtagtctatttcataagaactccacag 375  Q
    ||| ||   |||   ||||||||||||||||||||    
T  2189254 tcttttcgatagctcatttcataagaactccacag 2189288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 142 - 375
Target Start/End: Original strand, 36422163 - 36422396
Alignment:
Q  142 gtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccgg 241  Q
    |||||||||||| | |||||||  | |||||| ||||| ||||| |||| ||||||||||||| |||||||||||||||| | |||||||||||| ||||    
T  36422163 gtaacacccaagaccgacgaggatggggagtggtcgccggtgcacaaggcacgacaatgagcggctcccgacagcttctagaggaatcgaatcacgccgg 36422262  T
Q  242 aatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatctt 341  Q
    ||||| ||||||||  ||||| || |||||||| | | |||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||    
T  36422263 aatgagagggatcctaaggccttgtaggtatgggactacatggttgaaggaaggcttataagaattgttgggtactacctatatcaacaagatgcatctt 36422362  T
Q  342 ctctttagtagtctatttcataagaactccacag 375  Q
    || ||  ||||   ||||||||||||||||||||    
T  36422363 cttttcggtagctcatttcataagaactccacag 36422396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 139 - 343
Target Start/End: Complemental strand, 29357693 - 29357490
Alignment:
Q  139 attgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacac 238  Q
    ||||||||||||||||||||||||||||   | || |||||  ||||||||| ||||||||||||| ||||||||| |||||| |||||  |||||||||    
T  29357693 attgtaacacccaaggctgacgagggcgtaaaatggtcgccgatgcataaggcacgacaatgagcggctcccgacaacttctagatgaactgaatcacac 29357594  T
Q  239 cggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcat 338  Q
    || ||||| ||| ||||||||| ||||||||||||| | |||||||||||||||| | |||||||||||||||||||||| |||||||||||||||||||    
T  29357593 cg-aatgagaggtatcccgaggtcgtgcaggtatgggactgcatggttgaaggaatgtttataagaattgtttggtactaactatatcaacaagatgcat 29357495  T
Q  339 cttct 343  Q
    |||||    
T  29357494 cttct 29357490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 141 - 375
Target Start/End: Complemental strand, 6747834 - 6747600
Alignment:
Q  141 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 240  Q
    |||||||||||||||||||||||||  |||||| ||||| ||||| |||| | ||||||||||| ||||||||| |||||| |  |   ||||||||  |    
T  6747834 tgtaacacccaaggctgacgagggcagggagtggtcgccggtgcacaaggcatgacaatgagcggctcccgacaacttctagacaagctgaatcacattg 6747735  T
Q  241 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 340  Q
    |||||| |||||||| ||||||||| |||||||  | | |||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||    
T  6747734 gaatgagagggatcctgaggccgtgtaggtatgatactacatggttgaaggaaggattataagaattgtttggtactacctatatcaacaagatgcatct 6747635  T
Q  341 tctctttagtagtctatttcataagaactccacag 375  Q
    ||| ||| |||| ||||| ||||| ||||||||||    
T  6747634 tctttttggtagcctattccataaaaactccacag 6747600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 141 - 341
Target Start/End: Original strand, 43233323 - 43233523
Alignment:
Q  141 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 240  Q
    |||||||||||||||||||||| |||||||||| ||||| |||||||||| ||||||||||||| ||||  |||||||||| | ||| ||||||||||||    
T  43233323 tgtaacacccaaggctgacgagtgcgaggagtggtcgccggtgcataaggcacgacaatgagcggctcctaacagcttctagaggaaccgaatcacaccg 43233422  T
Q  241 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 340  Q
     ||||| |||||||  ||||||||| |||||||  | || |||||| ||||||  ||||||||||||||||||||||| |||||||||||||||||||||    
T  43233423 aaatgagagggatcatgaggccgtgtaggtatgtgactgtatggttaaaggaagacttataagaattgtttggtactatctatatcaacaagatgcatct 43233522  T
Q  341 t 341  Q
    |    
T  43233523 t 43233523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 187 - 375
Target Start/End: Original strand, 2193212 - 2193400
Alignment:
Q  187 aaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggtt 286  Q
    |||| |||||||||| || |||| ||||||||||| | ||| |||||||||||||||||| |||| ||| ||| |||||||||||||| | |||||||||    
T  2193212 aaggcacgacaatgaacggctcctgacagcttctagaggaaccgaatcacaccggaatgagagggttcctgagaccgtgcaggtatgggactgcatggtt 2193311  T
Q  287 gaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttctctttagtagtctatttcataagaactccacag 375  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||  ||||   |||||||| |||||||||||    
T  2193312 gaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttctattcggtagctcatttcataggaactccacag 2193400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 141 - 375
Target Start/End: Original strand, 679727 - 679960
Alignment:
Q  141 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 240  Q
    ||||||||| ||||||||||||| || |||||| |||||  |||| || | ||||||||||||  |||||||||||||||| | |||  |||||||| |     
T  679727 tgtaacacctaaggctgacgaggacggggagtggtcgccgatgcacaaagcacgacaatgagctgctcccgacagcttctagaggaactgaatcacatca 679826  T
Q  241 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 340  Q
    |||||| |||||||| |||| |||| |||||||| | | ||||| |||||||| |||||||||||||| ||||||||||||||||||||||||||||| |    
T  679827 gaatgagagggatcctgaggtcgtgtaggtatgggagtacatggctgaaggaaggcttataagaattg-ttggtactacctatatcaacaagatgcatat 679925  T
Q  341 tctctttagtagtctatttcataagaactccacag 375  Q
    ||| ||| |||| | ||| ||||||||||||||||    
T  679926 tctttttggtagcccattccataagaactccacag 679960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 138 - 331
Target Start/End: Complemental strand, 26957796 - 26957603
Alignment:
Q  138 cattgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcaca 237  Q
    |||||||||||| ||||| |||||||||| | |||| ||| | ||||| |||| ||||||||||||| ||||||||| |||||| | ||| |||||||||    
T  26957796 cattgtaacaccaaaggccgacgagggcgggaagtggtcgtcggtgcacaaggcacgacaatgagcggctcccgacaacttctagaggaaccgaatcaca 26957697  T
Q  238 ccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaa 331  Q
     |||||||| |||||||  ||||| ||| |||||||||| | |||||||||| ||| |||||||||||||||||||||||||||||||||||||    
T  26957696 tcggaatgagagggatcttgaggctgtgtaggtatggaactacatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaa 26957603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 141 - 372
Target Start/End: Complemental strand, 2611888 - 2611657
Alignment:
Q  141 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 240  Q
    ||||||||| |||||||||||||| | |||||| ||||| ||||| |||| ||||||||||||| |||||||||||||||| | |||  |||||||| ||    
T  2611888 tgtaacaccaaaggctgacgagggtggggagtggtcgccggtgcacaaggcacgacaatgagcggctcccgacagcttctagaggaactgaatcacatcg 2611789  T
Q  241 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 340  Q
    |||||| |||| ||| |||| | || |||||||  | |  ||||| ||||||| |||||||||||||||||||||||| ||||| |||||||||||||||    
T  2611788 gaatgagaggggtcctgaggtcatgtaggtatgagactatatggtggaaggaaggcttataagaattgtttggtactatctataacaacaagatgcatct 2611689  T
Q  341 tctctttagtagtctatttcataagaactcca 372  Q
    ||| ||| |||| | |||  ||||||||||||    
T  2611688 tctttttggtagcccattctataagaactcca 2611657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 149 - 375
Target Start/End: Complemental strand, 35527348 - 35527123
Alignment:
Q  149 ccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccggaatgata 248  Q
    ||||||||||||||| || |||||| ||| | ||||| |||  ||| ||||||||| ||||| |||||||||| | ||| |||||||||||| ||||| |    
T  35527348 ccaaggctgacgaggacggggagtggtcgtcggtgcacaagacacg-caatgagcggctcccaacagcttctagacgaaccgaatcacaccgaaatgaga 35527250  T
Q  249 gggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttctcttta 348  Q
    |||||||||||| ||||||  ||||| | ||  |||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||| |||| || |    
T  35527249 gggatcccgaggtcgtgcaaatatgggactggttggttgaaagaaggcttataagaattgtttggtgctacctatatcaacaagatgcatattcttttca 35527150  T
Q  349 gtagtctatttcataagaactccacag 375  Q
    |||||| ||| |||| |||||||||||    
T  35527149 gtagtccattccataggaactccacag 35527123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 141 - 375
Target Start/End: Original strand, 42515455 - 42515688
Alignment:
Q  141 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 240  Q
    ||||| |||||||||||||||||||  |||||| ||||| |||||   ||   ||||||||||  |||||||||||||||| | ||| ||||||||| |     
T  42515455 tgtaatacccaaggctgacgagggcagggagtg-tcgccggtgcaaggggcgtgacaatgagcagctcccgacagcttctagacgaaccgaatcacatca 42515553  T
Q  241 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 340  Q
    |||||| |||||||| ||||||||| |||||||  | | |||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||    
T  42515554 gaatgagagggatcctgaggccgtgtaggtatgagactacatggttgaaggaaggcttataagaagtgtttggtactacctatatcaacaagatgcatct 42515653  T
Q  341 tctctttagtagtctatttcataagaactccacag 375  Q
    ||| ||  ||||   ||| ||||||||||||||||    
T  42515654 tcttttcggtagctcattccataagaactccacag 42515688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 168 - 375
Target Start/End: Original strand, 28495791 - 28495998
Alignment:
Q  168 ggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccggaatgatagggatcccgaggccgtgca 267  Q
    |||||| ||||| ||||| |||| || ||||| |||| ||||| ||| |||||| | ||||||||||||| |||||||| |||||||  ||||||||| |    
T  28495791 ggagtggtcgccggtgcacaaggcacaacaattagcggctcccaacaacttctagaggaatcgaatcacatcggaatgagagggatcttgaggccgtgta 28495890  T
Q  268 ggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttctctttagtagtctatttcataagaa 367  Q
    ||||||| | | |||||||||||||| ||||||||||| |||| |||||||||||||||||||||||||||||||| ||  ||||   ||| ||||||||    
T  28495891 ggtatgggactacatggttgaaggaaggcttataagaactgttgggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaa 28495990  T
Q  368 ctccacag 375  Q
    ||||||||    
T  28495991 ctccacag 28495998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 141 - 375
Target Start/End: Complemental strand, 35474357 - 35474123
Alignment:
Q  141 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 240  Q
    ||||||||| |||||||| ||| ||| |||||| ||| | ||||| |||| |||||||||||||  |||||||| |||||| |  | |||||||||||||    
T  35474357 tgtaacacctaaggctgatgagtgcggggagtggtcgtcggtgcacaaggcacgacaatgagcggttcccgacaacttctagaacagtcgaatcacaccg 35474258  T
Q  241 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 340  Q
    |||||| ||||||||  ||| |||| |||||||  | | ||||||||||| ||  |||||||||||||||| ||||||| ||||||||||||||||||||    
T  35474257 gaatgagagggatccttaggtcgtgtaggtatgagactacatggttgaagaaagacttataagaattgtttagtactacttatatcaacaagatgcatct 35474158  T
Q  341 tctctttagtagtctatttcataagaactccacag 375  Q
    ||| ||| ||||   ||| ||||||||||||||||    
T  35474157 tctttttggtagctcattccataagaactccacag 35474123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 230 - 375
Target Start/End: Complemental strand, 2941904 - 2941759
Alignment:
Q  230 gaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaac 329  Q
    |||||||| | |||||| |||||||| |||||||| ||||||||| | |||||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  2941904 gaatcacatcagaatgagagggatcctgaggccgtacaggtatgggactgcatggttgaaggaaggctgataagaattgtttggtactacctatatcaac 2941805  T
Q  330 aagatgcatcttctctttagtagtctatttcataagaactccacag 375  Q
    |||||||||||||| ||  ||||   ||| ||||||||||||||||    
T  2941804 aagatgcatcttcttttcggtagctcattccataagaactccacag 2941759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 230 - 375
Target Start/End: Original strand, 18833285 - 18833430
Alignment:
Q  230 gaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaac 329  Q
    |||||||| |||||||| |||| ||| |||||||| ||||||||||| ||||||||||| |||||||||||| ||||||||| |||||||||||||||||    
T  18833285 gaatcacatcggaatgagagggttcctgaggccgtacaggtatggaactgcatggttgagggaaagcttatatgaattgtttagtactacctatatcaac 18833384  T
Q  330 aagatgcatcttctctttagtagtctatttcataagaactccacag 375  Q
    |||||||||||||| ||  ||||   ||| ||||||||||||||||    
T  18833385 aagatgcatcttcttttcggtagctaattacataagaactccacag 18833430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 230 - 375
Target Start/End: Original strand, 42515091 - 42515236
Alignment:
Q  230 gaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaac 329  Q
    |||||||| |||||||| |||||||| |||||||||||||||||  | |||||| |||||||||  ||||||||||||||||||||||||||||||||||    
T  42515091 gaatcacatcggaatgagagggatcctgaggccgtgcaggtatgagactgcatgattgaaggaagacttataagaattgtttggtactacctatatcaac 42515190  T
Q  330 aagatgcatcttctctttagtagtctatttcataagaactccacag 375  Q
    ||||||||| |||| ||| ||||   ||| ||||||||||||||||    
T  42515191 aagatgcattttctttttggtagctcattccataagaactccacag 42515236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 230 - 375
Target Start/End: Original strand, 9124958 - 9125103
Alignment:
Q  230 gaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaac 329  Q
    |||||||| |||||||| || ||||  |||||||||||||||||  | || |||||| ||||||||||||||||||||||||||||||||||||||||||    
T  9124958 gaatcacatcggaatgagagagatcttgaggccgtgcaggtatgagactgtatggttaaaggaaagcttataagaattgtttggtactacctatatcaac 9125057  T
Q  330 aagatgcatcttctctttagtagtctatttcataagaactccacag 375  Q
    |||||||||||||| ||  ||||   ||| ||||||||||||||||    
T  9125058 aagatgcatcttcttttcggtagctcattccataagaactccacag 9125103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 230 - 375
Target Start/End: Complemental strand, 13125283 - 13125138
Alignment:
Q  230 gaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaac 329  Q
    |||||| | |||||||| |||||||  |||||| ||||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||| |||    
T  13125283 gaatcatatcggaatgagagggatcttgaggccctgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatattaac 13125184  T
Q  330 aagatgcatcttctctttagtagtctatttcataagaactccacag 375  Q
    |||||||||||||| ||  ||||   ||| ||||||||||||||||    
T  13125183 aagatgcatcttcttttcggtagctcattccataagaactccacag 13125138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 229 - 372
Target Start/End: Complemental strand, 6719222 - 6719079
Alignment:
Q  229 cgaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaa 328  Q
    |||||||||  ||||||| |||||||| ||||| ||| |||||||| | | |||||||||||||| ||||||||||||||||||||||||||||||||||    
T  6719222 cgaatcacattggaatgagagggatcctgaggctgtgtaggtatgggactacatggttgaaggaatgcttataagaattgtttggtactacctatatcaa 6719123  T
Q  329 caagatgcatcttctctttagtagtctatttcataagaactcca 372  Q
    ||||||||||||||| ||  ||||   ||| |||||||||||||    
T  6719122 caagatgcatcttcttttcggtagctcattccataagaactcca 6719079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 230 - 340
Target Start/End: Complemental strand, 11517535 - 11517426
Alignment:
Q  230 gaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaac 329  Q
    |||||||| |||||||| |||||||| |||||||| ||||||||| | |||||||| ||||||| |||||||||||||||||||||||||||||||||||    
T  11517535 gaatcacatcggaatgagagggatcctgaggccgtacaggtatgggactgcatggt-gaaggaaggcttataagaattgtttggtactacctatatcaac 11517437  T
Q  330 aagatgcatct 340  Q
    |||||||||||    
T  11517436 aagatgcatct 11517426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 197 - 375
Target Start/End: Complemental strand, 28495788 - 28495610
Alignment:
Q  197 aatgagcgactcccgacagcttctaaatgaatcgaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagc 296  Q
    |||||||| ||||| |||||||||| | |||||||||| || |||||||| |||||||| |||| |||| |||||||| | | ||||||||||||||  |    
T  28495788 aatgagcggctcccaacagcttctagaggaatcgaatcccatcggaatgagagggatcctgaggtcgtgtaggtatgggactacatggttgaaggaagac 28495689  T
Q  297 ttataagaattgtttggtactacctatatcaacaagatgcatcttctctttagtagtctatttcataagaactccacag 375  Q
    ||||||||||||||  ||  ||||||||||||||||||||||||||| ||  ||||   ||| ||||||||||||||||    
T  28495688 ttataagaattgttgagttttacctatatcaacaagatgcatcttcttttaggtagctcattccataagaactccacag 28495610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 139 - 315
Target Start/End: Complemental strand, 3305550 - 3305374
Alignment:
Q  139 attgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacac 238  Q
    ||||||||||  ||||||||||||||||  ||||| ||||| ||| |||||| ||||||||||||  |||||||||||||||| | ||| |||||||||     
T  3305550 attgtaacacataaggctgacgagggcggagagtggtcgccggtggataaggcacgacaatgagcagctcccgacagcttctagaggaaccgaatcacat 3305451  T
Q  239 cggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggta 315  Q
    || |||||  ||||||| ||||||||| | |||||| | | |||||||||| ||| |||||| ||||||||||||||    
T  3305450 cgaaatgagggggatcctgaggccgtgtaagtatgggactacatggttgaatgaaggcttatgagaattgtttggta 3305374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 141 - 273
Target Start/End: Original strand, 10430673 - 10430805
Alignment:
Q  141 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 240  Q
    |||||||||||||||||| ||||||| |||||| ||||| ||||| |||| ||||||||||||| |||| ||||||||||| | ||| || |||||||||    
T  10430673 tgtaacacccaaggctgatgagggcggggagtggtcgccggtgcacaaggcacgacaatgagcggctcctgacagcttctagaggaaccgtatcacaccg 10430772  T
Q  241 gaatgatagggatcccgaggccgtgcaggtatg 273  Q
    |||||| |||| ||| |||||||||||||||||    
T  10430773 gaatgagagggttcctgaggccgtgcaggtatg 10430805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 231 - 375
Target Start/End: Complemental strand, 36015557 - 36015413
Alignment:
Q  231 aatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaaca 330  Q
    |||||||||||||||| ||||||||| |||| ||||| |||||  | | |||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  36015557 aatcacaccggaatgagagggatcccaaggcagtgcaagtatgagactccatggttgaaggaaagcttaaaagaattgtttggtactacatatatcaaca 36015458  T
Q  331 agatgcatcttctctttagtagtctatttcataagaactccacag 375  Q
    |||||| |||||| || | ||| | ||| |||||||||| |||||    
T  36015457 agatgcctcttcttttaaatagcccattccataagaacttcacag 36015413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 195 - 375
Target Start/End: Original strand, 46425705 - 46425885
Alignment:
Q  195 acaatgagcgactcccgacagcttctaaatgaatcgaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaa 294  Q
    |||| ||||| |||||||||||||||| |  |  ||||||||| |||||||| |||||||| ||| || || |||||||| | | ||||||||||  ||     
T  46425705 acaaagagcggctcccgacagcttctagacaagccgaatcacatcggaatgagagggatcctgagaccatgtaggtatgggactacatggttgaaataag 46425804  T
Q  295 gcttataagaattgtttggtactacctatatcaacaagatgcatcttctctttagtagtctatttcataagaactccacag 375  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||| ||  |||   |||| ||||||||||||||||    
T  46425805 gcttataagaattgtttggtattacctatatcaacaagatgcatcttcttttcggtatcttattccataagaactccacag 46425885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 141 - 370
Target Start/End: Complemental strand, 29039248 - 29039027
Alignment:
Q  141 tgtaacacccaaggctgacgagggc-gaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacacc 239  Q
    ||||||||||| |||||| | |||| | |||||||||||| ||||| |||| ||||||||||||| ||||||||||          || ||||||||| |    
T  29039248 tgtaacacccacggctgatgggggcaggggagtgatcgccggtgcacaaggcacgacaatgagcggctcccgacaga---------aaccgaatcacatc 29039158  T
Q  240 ggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatc 339  Q
    ||||||| ||| |||| ||||||||| || ||||  | | |||||||||| | | ||||| ||||||||||||||||||||||||||||||| |||||||    
T  29039157 ggaatgagaggcatcctgaggccgtgtagatatgtgactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcatc 29039058  T
Q  340 ttctctttagtagtctatttcataagaactc 370  Q
    |||| |||  || || ||| |||||||||||    
T  29039057 ttctttttgataatccattccataagaactc 29039027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 230 - 341
Target Start/End: Complemental strand, 5406735 - 5406624
Alignment:
Q  230 gaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaac 329  Q
    |||||||| |||||||||||||||||  | | ||||| ||||||| | ||||||||||||||||   ||||||||||||||||||| |||||||||||||    
T  5406735 gaatcacatcggaatgatagggatcctaaagtcgtgccggtatgggactgcatggttgaaggaagatttataagaattgtttggtattacctatatcaac 5406636  T
Q  330 aagatgcatctt 341  Q
    ||||||||||||    
T  5406635 aagatgcatctt 5406624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 140 - 274
Target Start/End: Original strand, 2463551 - 2463685
Alignment:
Q  140 ttgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacacc 239  Q
    ||||||||||||||||||||||||||| |||||| ||||| ||||| |||| |||||||||| || ||||  |||||||||| | ||| |||| ||||||    
T  2463551 ttgtaacacccaaggctgacgagggcggggagtggtcgccggtgcacaaggcacgacaatgaacggctcctaacagcttctagaggaaccgaaacacacc 2463650  T
Q  240 ggaatgatagggatcccgaggccgtgcaggtatgg 274  Q
    ||||||| |||| ||| |||||| || ||||||||    
T  2463651 ggaatgagagggttcctgaggccatgtaggtatgg 2463685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 280 - 375
Target Start/End: Original strand, 2465782 - 2465877
Alignment:
Q  280 catggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttctctttagtagtctatttcataagaactccacag 375  Q
    |||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||| ||  ||||   ||| ||||||||||||||||    
T  2465782 catggttgaaggaaggcttataagagttgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacag 2465877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 257 - 375
Target Start/End: Original strand, 2465950 - 2466068
Alignment:
Q  257 gaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttctctttagtagtcta 356  Q
    |||||| || |||||||| | | |||||||||||||| |||||||||| ||||||||||||||||||||||||||| |||||||||| ||  ||||   |    
T  2465950 gaggccatgtaggtatgggactacatggttgaaggaaggcttataagagttgtttggtactacctatatcaacaagttgcatcttcttttcggtagctca 2466049  T
Q  357 tttcataagaactccacag 375  Q
    || ||||||||||||||||    
T  2466050 ttccataagaactccacag 2466068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 194 - 343
Target Start/End: Complemental strand, 22529418 - 22529269
Alignment:
Q  194 gacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaa 293  Q
    ||||||||||| |||||| | ||||||| | ||| ||||||| | | |||||| |||||||| |||| | || | ||||||   | ||||||||||||||    
T  22529418 gacaatgagcggctcccgcctgcttctagacgaaccgaatcatatccgaatgagagggatcctgaggtcatgtaagtatgggcctacatggttgaaggaa 22529319  T
Q  294 agcttataagaattgtttggtactacctatatcaacaagatgcatcttct 343  Q
     ||||||||||| |||||||||||| |||||| |||||||||||||||||    
T  22529318 ggcttataagaaatgtttggtactatctatataaacaagatgcatcttct 22529269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 233 - 341
Target Start/End: Original strand, 25182363 - 25182471
Alignment:
Q  233 tcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaag 332  Q
    ||||| |||||||| || ||||| ||| | ||||| |||||  | ||||||||||||||||  |||||||||||||||||||||||||||||||||||||    
T  25182363 tcacatcggaatgagagagatcctgagactgtgcaagtatgagactgcatggttgaaggaagacttataagaattgtttggtactacctatatcaacaag 25182462  T
Q  333 atgcatctt 341  Q
    || ||||||    
T  25182463 atacatctt 25182471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 240 - 321
Target Start/End: Complemental strand, 13124838 - 13124757
Alignment:
Q  240 ggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacct 321  Q
    ||||||| |||||||  |||||||||||||||||| | |||||||||||||||| ||||||||||||||| |||||||||||    
T  13124838 ggaatgagagggatcttgaggccgtgcaggtatgggactgcatggttgaaggaaggcttataagaattgtgtggtactacct 13124757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 226 - 375
Target Start/End: Complemental strand, 31406735 - 31406586
Alignment:
Q  226 aatcgaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatat 325  Q
    |||||||||||| |  ||||| |||||||| || ||||||||| | ||| | || ||||||||| ||   ||||| |||||||||||||  |||||||||    
T  31406735 aatcgaatcacatcaaaatgagagggatcctgaagccgtgcagatctgggactgaatggttgaaagatgacttattagaattgtttggtgttacctatat 31406636  T
Q  326 caacaagatgcatcttctctttagtagtctatttcataagaactccacag 375  Q
    |||||||||||||||||| ||  |||| |  |||||||||||||||||||    
T  31406635 caacaagatgcatcttcttttcggtagcccgtttcataagaactccacag 31406586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 248 - 338
Target Start/End: Original strand, 11372468 - 11372558
Alignment:
Q  248 agggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcat 338  Q
    |||| |||| ||||| || ||||||| ||||| ||||||||||||| ||||||||||||||||||||||||||| || ||||| |||||||    
T  11372468 agggttcccaaggccatgtaggtatgaaattgtatggttgaaggaaggcttataagaattgtttggtactacctgtaccaacatgatgcat 11372558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 281 - 375
Target Start/End: Complemental strand, 26421401 - 26421307
Alignment:
Q  281 atggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttctctttagtagtctatttcataagaactccacag 375  Q
    |||||||||||||  ||||||||||||| ||| ||||||||||||||||||||||||| || | ||  |||||| ||| ||||||||||||||||    
T  26421401 atggttgaaggaagacttataagaattgcttgatactacctatatcaacaagatgcatatttttttcggtagtccattccataagaactccacag 26421307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 278 - 343
Target Start/End: Complemental strand, 31743923 - 31743858
Alignment:
Q  278 tgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttct 343  Q
    |||||||||||||||| |||||||||||| ||||||| ||| ||||||||||||||||||||||||    
T  31743923 tgcatggttgaaggaatgcttataagaatggtttggtgctatctatatcaacaagatgcatcttct 31743858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 260 - 372
Target Start/End: Original strand, 1628745 - 1628854
Alignment:
Q  260 gccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttctctttagtagtctattt 359  Q
    ||||||||| ||||| ||||||||||||||| || ||||||||   ||||||||||||| | |||||||||||||||||||||| ||| | || | ||      
T  1628745 gccgtgcagatatgggattgcatggttgaagaaaggcttataa---ttgtttggtactatcgatatcaacaagatgcatcttcttttttgaagcccatac 1628841  T
Q  360 cataagaactcca 372  Q
    |||||||||||||    
T  1628842 cataagaactcca 1628854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 257 - 375
Target Start/End: Complemental strand, 26421880 - 26421762
Alignment:
Q  257 gaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttctctttagtagtcta 356  Q
    ||||||||||| |||||  | ||||||||||||| || ||| |||||||||||| |||||| |||||| |||||||||| ||||||| ||  |||| | |    
T  26421880 gaggccgtgcatgtatgagactgcatggttgaagtaaggctcataagaattgttaggtactccctataccaacaagatgaatcttcttttcggtagccca 26421781  T
Q  357 tttcataagaactccacag 375  Q
    || |||||||||| |||||    
T  26421780 ttccataagaactacacag 26421762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 141 - 323
Target Start/End: Complemental strand, 16812074 - 16811900
Alignment:
Q  141 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 240  Q
    ||||||| ||||||||||| |||||| |||||| | ||| ||||| |||  ||| ||||||||| |||||||| |||||||||  || ||||||||| |     
T  16812074 tgtaacatccaaggctgactagggcggggagtggttgccggtgcacaagacacgccaatgagcggctcccgacggcttctaaagaaaccgaatcacatca 16811975  T
Q  241 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctat 323  Q
    |||||| |        || |||||| |||||||  | | |||||||||||||| ||||||||||||||||| |||||| ||||    
T  16811974 gaatgaga--------gatgccgtgtaggtatgagactacatggttgaaggaatgcttataagaattgttttgtactatctat 16811900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 229 - 343
Target Start/End: Original strand, 9623206 - 9623320
Alignment:
Q  229 cgaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaa 328  Q
    |||||||||  ||||||| |||||||| ||||  ||||| | |||  | | |||||| ||||||   ||||||||||||||||| ||| |||||||||||    
T  9623206 cgaatcacaatggaatgagagggatccagaggttgtgcatgcatgagactccatggtagaaggagtacttataagaattgtttgataccacctatatcaa 9623305  T
Q  329 caagatgcatcttct 343  Q
    |||||||||||||||    
T  9623306 caagatgcatcttct 9623320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 280 - 369
Target Start/End: Original strand, 16192368 - 16192457
Alignment:
Q  280 catggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttctctttagtagtctatttcataagaact 369  Q
    |||| ||||| ||| | ||||||||||||||||||| |||||| |||||||||||||||||||  ||| |||| | ||| ||||||||||    
T  16192368 catgattgaatgaaggattataagaattgtttggtattacctacatcaacaagatgcatcttcgttttggtagcccattccataagaact 16192457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 262 - 331
Target Start/End: Original strand, 6585639 - 6585708
Alignment:
Q  262 cgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaa 331  Q
    ||||||| ||||  |||||||| ||||| |||  ||||||| ||||||||||||||||||||||||||||    
T  6585639 cgtgcagatatgagattgcatgattgaaagaagacttataaaaattgtttggtactacctatatcaacaa 6585708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 278 - 328
Target Start/End: Original strand, 2490086 - 2490136
Alignment:
Q  278 tgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaa 328  Q
    |||||| ||||||||| ||||||||||| |||||| |||||||||||||||    
T  2490086 tgcatgattgaaggaatgcttataagaagtgtttgttactacctatatcaa 2490136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 262 - 335
Target Start/End: Original strand, 33316759 - 33316832
Alignment:
Q  262 cgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatg 335  Q
    ||||||||||||  | | |||||||||||||||  ||||||||||||||||  | ||| |||||||||||||||    
T  33316759 cgtgcaggtatgagactacatggttgaaggaaaaattataagaattgtttgacaatacttatatcaacaagatg 33316832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 141 - 185
Target Start/End: Original strand, 2189510 - 2189554
Alignment:
Q  141 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgca 185  Q
    |||||||||||||||||||||||||| |||||| ||||| |||||    
T  2189510 tgtaacacccaaggctgacgagggcggggagtggtcgccggtgca 2189554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 141 - 367
Target Start/End: Original strand, 37672064 - 37672296
Alignment:
Q  141 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttcta-----aatgaatcgaat-c 234  Q
    |||||||||||| | |||||||||||| ||||||| | |||||| ||||| | ||||||||||| |||  |||| ||||||     || ||| ||||| |    
T  37672064 tgtaacacccaatgttgacgagggcgatgagtgattgtcagtgcgtaaggcatgacaatgagcggctcatgacatcttctaggaaaaaagaaacgaattc 37672163  T
Q  235 acaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagat 334  Q
    ||| |  ||||| |||| ||   |  ||||||||||||   | |||||||||| |  || | |||||| |||||||||||||||| | || |||||||||    
T  37672164 acatcataatgagaggggtcatcacaccgtgcaggtataagactgcatggttgcaaaaaggtttataataattgtttggtactacttgtaccaacaagat 37672263  T
Q  335 gcatcttctctttagtagtctatttcataagaa 367  Q
    ||| ||||| |||  ||||  ||||||||||||    
T  37672264 gcaacttctttttgttagttgatttcataagaa 37672296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 258 - 374
Target Start/End: Original strand, 11372926 - 11373042
Alignment:
Q  258 aggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttctctttagtagtctat 357  Q
    ||||| || |||||||  |||||||||||||| |||  ||| ||||||||||||  || || ||||| ||||||||||  |||||| ||| |||| |||     
T  11372926 aggccatgtaggtatgagattgcatggttgaatgaagacttgtaagaattgtttcatagtatctataccaacaagatgagtcttctttttcgtagcctaa 11373025  T
Q  358 ttcataagaactccaca 374  Q
      |||||||||| ||||    
T  11373026 accataagaactacaca 11373042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333 (Bit Score: 125; Significance: 3e-64; HSPs: 2)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 139 - 375
Target Start/End: Original strand, 4469 - 4705
Alignment:
Q  139 attgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacac 238  Q
    |||||||||||||||||||||||||||||||||||  |||| ||||| |||| ||||||||||||| |||| ||||||||||| | ||| |||||||||     
T  4469 attgtaacacccaaggctgacgagggcgaggagtggccgccggtgcacaaggcacgacaatgagcggctcctgacagcttctagaggaaccgaatcacat 4568  T
Q  239 cggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcat 338  Q
    ||||| || |||| ||| |||||| ||||||||||| | |||||||||||||||| | ||| ||||||||||||||||||||||||||||||||||||||    
T  4569 cggaaggagagggttcctgaggccatgcaggtatgggactgcatggttgaaggaaggtttagaagaattgtttggtactacctatatcaacaagatgcat 4668  T
Q  339 cttctctttagtagtctatttcataagaactccacag 375  Q
    ||||| ||  ||||   |||| |||||||||||||||    
T  4669 cttcttttcggtagctcattttataagaactccacag 4705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333; HSP #2
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 141 - 375
Target Start/End: Original strand, 4926 - 5165
Alignment:
Q  141 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 240  Q
    ||||||||| ||||||||||||||||||||||| ||||| ||||| |||| |||||||| |||| |||| |||| |||||| | ||| ||||||||||||    
T  4926 tgtaacacctaaggctgacgagggcgaggagtggtcgccggtgcacaaggcacgacaattagcggctcctgacaacttctagaggaaccgaatcacaccg 5025  T
Q  241 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagctt-----ataagaattgtttggtactacctatatcaacaagatg 335  Q
    |||||| |||| ||| |||||| ||||||||||| | |||||||||||||||| | ||     | ||||||||||||||||||||||||| |||||||||    
T  5026 gaatgagagggttcctgaggccatgcaggtatgggactgcatggttgaaggaaggtttaaaagagaagaattgtttggtactacctatattaacaagatg 5125  T
Q  336 catcttctctttagtagtctatttcataagaactccacag 375  Q
    |||||||| ||  ||||   ||||||||||||||||||||    
T  5126 catcttcttttcggtagctcatttcataagaactccacag 5165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 120; Significance: 3e-61; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 140 - 375
Target Start/End: Original strand, 2651 - 2886
Alignment:
Q  140 ttgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacacc 239  Q
    ||||||||||||||||||||||||||| |||||| ||||| | ||| |||| ||||||||||| | ||||||||| |||||| | ||||||||||||| |    
T  2651 ttgtaacacccaaggctgacgagggcggggagtggtcgccggagcacaaggcacgacaatgagtggctcccgacaacttctagaggaatcgaatcacatc 2750  T
Q  240 ggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatc 339  Q
    | ||||| |||||||| ||||||||| |||||||| | | |||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||     
T  2751 gaaatgagagggatcctgaggccgtgtaggtatgggactacatggttgaaggaaggcttataagaattgttgggtactacctatatcaacaagatgcata 2850  T
Q  340 ttctctttagtagtctatttcataagaactccacag 375  Q
    |||| ||  ||||   ||| ||||||||||||||||    
T  2851 ttcttttcggtagctcattccataagaactccacag 2886  T

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Target: scaffold0088 (Bit Score: 116; Significance: 6e-59; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 141 - 344
Target Start/End: Original strand, 23583 - 23786
Alignment:
Q  141 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 240  Q
    |||||||||||||||||||||||||| ||| || ||||| ||||| |||| ||||||||||||| |||| ||  || |||| | ||| ||||||||||||    
T  23583 tgtaacacccaaggctgacgagggcggggaatggtcgccggtgcacaaggcacgacaatgagcggctcctgatggcatctagaggaaccgaatcacaccg 23682  T
Q  241 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 340  Q
     ||||| |||| ||  |||||||||||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  23683 aaatgagagggttcttgaggccgtgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatct 23782  T
Q  341 tctc 344  Q
    ||||    
T  23783 tctc 23786  T

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Target: scaffold0002 (Bit Score: 115; Significance: 3e-58; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 141 - 375
Target Start/End: Original strand, 154668 - 154901
Alignment:
Q  141 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 240  Q
    |||||||||||||||||| ||||||| |||||| ||||| ||||| |||| ||||||||||||| ||| |||||||||||| | ||| |||||||| |||    
T  154668 tgtaacacccaaggctgatgagggcggggagtg-tcgccggtgcacaaggcacgacaatgagcggctctcgacagcttctagaggaaccgaatcacgccg 154766  T
Q  241 gaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 340  Q
    |||||| |||| ||| |||||| || |||||||| | | |||||||||||||| |||||||||||||||| |||||||||| ||||||||||||||||||    
T  154767 gaatgagagggctcctgaggccttgtaggtatgggactacatggttgaaggaaggcttataagaattgttgggtactacctgtatcaacaagatgcatct 154866  T
Q  341 tctctttagtagtctatttcataagaactccacag 375  Q
    ||| || |||||   ||| ||||||||||||||||    
T  154867 tcttttcagtagctcattccataagaactccacag 154901  T

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Target: scaffold0002; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 140 - 274
Target Start/End: Original strand, 151550 - 151681
Alignment:
Q  140 ttgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacacc 239  Q
    ||||||||||||| ||||||||||||| |||||| ||||| ||||| |||| |||||||||||||  || |||||||||||| | ||| |||||||| ||    
T  151550 ttgtaacacccaatgctgacgagggcggggagtg-tcgccggtgcacaaggcacgacaatgagcg-gtctcgacagcttctagaggaaccgaatcacgcc 151647  T
Q  240 ggaatgatagggatcccgaggccgtgcaggtatgg 274  Q
    | ||||| | |||||| |||||| || ||||||||    
T  151648 gaaatgaga-ggatcctgaggccttgtaggtatgg 151681  T

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Target: scaffold0664 (Bit Score: 100; Significance: 2e-49; HSPs: 1)
Name: scaffold0664
Description:

Target: scaffold0664; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 143 - 366
Target Start/End: Complemental strand, 4207 - 3993
Alignment:
Q  143 taacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccgga 242  Q
    |||||||||||||||||||||||| |||||| ||||          || ||||| ||||||||||||| ||| |||||| ||  || |||||||||| ||    
T  4207 taacacccaaggctgacgagggcggggagtggtcgct---------ggcacgactatgagcgactcccaacaacttctagatctattgaatcacaccaga 4117  T
Q  243 atgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttc 342  Q
    |||| ||||||||||||||||||||||||||| | ||||| |||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  4116 atgagagggatcccgaggccgtgcaggtatgggactgcattgttgaaggaatgcttataagaattgtttggtactacctgtatcaacaagatgcatcttc 4017  T
Q  343 tctttagtagtctatttcataaga 366  Q
    | ||| |||| | |||| ||||||    
T  4016 tttttggtagcccattttataaga 3993  T

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Target: scaffold0047 (Bit Score: 96; Significance: 6e-47; HSPs: 3)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 168 - 375
Target Start/End: Complemental strand, 17807 - 17600
Alignment:
Q  168 ggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccggaatgatagggatcccgaggccgtgca 267  Q
    |||||| ||||| |||||  ||| ||||||||||||| ||||||||| |||||  | ||| ||||| ||| | |||||| |||||||| ||||||||| |    
T  17807 ggagtggtcgccggtgcaccaggcacgacaatgagcggctcccgacaacttcttgaggaaccgaatgacatcagaatgagagggatcctgaggccgtgta 17708  T
Q  268 ggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttctctttagtagtctatttcataagaa 367  Q
    ||||||| | | ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||| ||| ||||   | ||||||||||    
T  17707 ggtatgggactacatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaggatgtatcttctttttggtagctcaattcataagaa 17608  T
Q  368 ctccacag 375  Q
    ||||||||    
T  17607 ctccacag 17600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047; HSP #2
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 192 - 375
Target Start/End: Complemental strand, 18319 - 18137
Alignment:
Q  192 acgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaagg 291  Q
    ||||||||||||| |||||||||||||||| | |||  |||||||| |||||||| |||||||| ||||||||| |||||||  | | ||| ||||||||    
T  18319 acgacaatgagcggctcccgacagcttctagaggaactgaatcacatcggaatgagagggatcctgaggccgtgtaggtatgtgactacatagttgaagg 18220  T
Q  292 aaagcttataagaattgtttggtactacctatatcaacaagatgcatcttctctttagtagtctatttcataagaactccacag 375  Q
    ||  ||||||||||||||||| |||||||||||||||||||||||||||| | ||| ||||   ||| ||||||||||||||||    
T  18219 aagacttataagaattgtttgatactacctatatcaacaagatgcatctt-tttttggtagctaattccataagaactccacag 18137  T

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Target: scaffold0047; HSP #3
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 141 - 237
Target Start/End: Complemental strand, 17916 - 17819
Alignment:
Q  141 tgtaacacccaaggctgacgagggc-gaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcaca 237  Q
    ||||||||||| ||||||||||||  | |||||| ||||| |||||  ||| ||||||||||||| |||||||||||||||| | ||| |||||||||    
T  17916 tgtaacacccacggctgacgagggaaggggagtggtcgccggtgcacgaggcacgacaatgagcggctcccgacagcttctagaggaaccgaatcaca 17819  T

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Target: scaffold0322 (Bit Score: 93; Significance: 3e-45; HSPs: 2)
Name: scaffold0322
Description:

Target: scaffold0322; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 231 - 375
Target Start/End: Original strand, 18966 - 19110
Alignment:
Q  231 aatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaaca 330  Q
    ||||||| |||||||| |||||||| |||||||||||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  18966 aatcacatcggaatgagagggatccagaggccgtgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaaca 19065  T
Q  331 agatgcatcttctctttagtagtctatttcataagaactccacag 375  Q
    |||| |||||||| ||  ||||   ||||||||||||||||||||    
T  19066 agattcatcttcttttcggtagctcatttcataagaactccacag 19110  T

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Target: scaffold0322; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 230 - 293
Target Start/End: Complemental strand, 18268 - 18205
Alignment:
Q  230 gaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaa 293  Q
    |||||||| |||||||| |||||||| |||||||||||||||||| | ||||||||||||||||    
T  18268 gaatcacatcggaatgagagggatccagaggccgtgcaggtatgggactgcatggttgaaggaa 18205  T

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Target: scaffold0499 (Bit Score: 87; Significance: 1e-41; HSPs: 1)
Name: scaffold0499
Description:

Target: scaffold0499; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 229 - 375
Target Start/End: Complemental strand, 2199 - 2053
Alignment:
Q  229 cgaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaa 328  Q
    ||||||||||| |||||| |||| ||| |||||||||||||||||  | |||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  2199 cgaatcacaccagaatgaaagggttcctgaggccgtgcaggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaa 2100  T
Q  329 caagatgcatcttctctttagtagtctatttcataagaactccacag 375  Q
    ||||||||||||||| ||  ||||   ||| ||||||||||||||||    
T  2099 caagatgcatcttcttttcggtagctcattccataagaactccacag 2053  T

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Target: scaffold0024 (Bit Score: 85; Significance: 2e-40; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 231 - 375
Target Start/End: Original strand, 105720 - 105864
Alignment:
Q  231 aatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaaca 330  Q
    ||||||| |||||||| |||||||| |||||||| ||||||||||| |||| ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  105720 aatcacatcggaatgagagggatcctgaggccgtacaggtatggaactgcagggttgaaggaaggcttataagaattgtttggtactacctatatcaaca 105819  T
Q  331 agatgcatcttctctttagtagtctatttcataagaactccacag 375  Q
    | ||||||||||| ||  ||||   ||| ||||||||||||||||    
T  105820 aaatgcatcttcttttcggtagctcattccataagaactccacag 105864  T

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Target: scaffold0007 (Bit Score: 82; Significance: 1e-38; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 230 - 343
Target Start/End: Complemental strand, 142421 - 142308
Alignment:
Q  230 gaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaac 329  Q
    |||||||| |||||||| |||||||| |||||||||||||||||| | | |||||||||||||| | |||||||||||||||||||||||||||||||||    
T  142421 gaatcacatcggaatgagagggatcctgaggccgtgcaggtatgggacttcatggttgaaggaatgtttataagaattgtttggtactacctatatcaac 142322  T
Q  330 aagatgcatcttct 343  Q
    ||||||||||||||    
T  142321 aagatgcatcttct 142308  T

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Target: scaffold0040 (Bit Score: 81; Significance: 5e-38; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 230 - 370
Target Start/End: Complemental strand, 2357 - 2217
Alignment:
Q  230 gaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaac 329  Q
    |||||||| |||||||| | ||||||  ||||||||||||||||| | | |||||||||||||| |||||||||||||||||||||||||||||||||||    
T  2357 gaatcacatcggaatgagaaggatcctaaggccgtgcaggtatgggactacatggttgaaggaaggcttataagaattgtttggtactacctatatcaac 2258  T
Q  330 aagatgcatcttctctttagtagtctatttcataagaactc 370  Q
    |||||||||||||| ||  ||||  |||| |||||||||||    
T  2257 aagatgcatcttcttttcggtagcttattccataagaactc 2217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 78; Significance: 3e-36; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 230 - 375
Target Start/End: Complemental strand, 107610 - 107465
Alignment:
Q  230 gaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaac 329  Q
    |||||||| |||||||| |||||| | |||||||| ||||||||| | |||||||||||||||| |||||||||||||||||| ||||||| ||||||||    
T  107610 gaatcacatcggaatgagagggattctgaggccgtacaggtatgggactgcatggttgaaggaaggcttataagaattgtttgatactaccaatatcaac 107511  T
Q  330 aagatgcatcttctctttagtagtctatttcataagaactccacag 375  Q
    |||||||||||||| ||  ||||   ||| ||||||||||||||||    
T  107510 aagatgcatcttcttttcggtagctcattccataagaactccacag 107465  T

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Target: scaffold0018 (Bit Score: 78; Significance: 3e-36; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 230 - 375
Target Start/End: Original strand, 10299 - 10444
Alignment:
Q  230 gaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaac 329  Q
    |||||||| |||||||| |||||||| ||||||||||| |||||| | ||||||||| |||||| ||||||||||||||||| |||||||||||||||||    
T  10299 gaatcacatcggaatgagagggatcctgaggccgtgcatgtatgggactgcatggttcaaggaaggcttataagaattgtttagtactacctatatcaac 10398  T
Q  330 aagatgcatcttctctttagtagtctatttcataagaactccacag 375  Q
    |||||||||||| | ||  ||||   ||| ||||||||||||||||    
T  10399 aagatgcatctttttttcggtagctcattccataagaactccacag 10444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 74; Significance: 8e-34; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 230 - 343
Target Start/End: Original strand, 245085 - 245198
Alignment:
Q  230 gaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaac 329  Q
    |||||||| |||||||| |||||||| |||||| || |||||||| | | |||||||||||| | |||||||||||||||||||||||||||||||||||    
T  245085 gaatcacatcggaatgagagggatcctgaggccatgtaggtatgggactacatggttgaagggaggcttataagaattgtttggtactacctatatcaac 245184  T
Q  330 aagatgcatcttct 343  Q
    ||||||||||||||    
T  245185 aagatgcatcttct 245198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 242 - 375
Target Start/End: Original strand, 245526 - 245659
Alignment:
Q  242 aatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatctt 341  Q
    ||||| |||||||  ||| ||||| |||||||| | | |||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||    
T  245526 aatgaaagggatcttgagtccgtgtaggtatgggacttcatggttgaagggatgcttataagaattgtttggtactacctatatcaacaagatgcatctt 245625  T
Q  342 ctctttagtagtctatttcataagaactccacag 375  Q
    || || ||||| |||   ||||||||||||||||    
T  245626 cttttcagtagcctaaaccataagaactccacag 245659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 70; Significance: 2e-31; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 230 - 343
Target Start/End: Complemental strand, 162825 - 162712
Alignment:
Q  230 gaatcacaccggaatgatagggatcccgaggccgtgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaac 329  Q
    |||| ||| |||||||| |||||||| |||||||| ||||||||  | ||||||||||||||||  |||||||||||||||||||||||||||||| |||    
T  162825 gaattacatcggaatgagagggatcctgaggccgtacaggtatgtgactgcatggttgaaggaagacttataagaattgtttggtactacctatattaac 162726  T
Q  330 aagatgcatcttct 343  Q
    ||||||||||||||    
T  162725 aagatgcatcttct 162712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 264 - 375
Target Start/End: Complemental strand, 69928 - 69817
Alignment:
Q  264 tgcaggtatggaattgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttctctttagtagtctatttcata 363  Q
    ||||||||||  | ||||| |||||||||| |||||||| ||||||||||||||||||||||||||| |||||||||| | || | |||   ||| ||||    
T  69928 tgcaggtatgagactgcatcgttgaaggaatgcttataataattgtttggtactacctatatcaacatgatgcatctttttttcattagctcattccata 69829  T
Q  364 agaactccacag 375  Q
    ||||||||||||    
T  69828 agaactccacag 69817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0557 (Bit Score: 60; Significance: 2e-25; HSPs: 2)
Name: scaffold0557
Description:

Target: scaffold0557; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 280 - 375
Target Start/End: Original strand, 2154 - 2249
Alignment:
Q  280 catggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttctctttagtagtctatttcataagaactccacag 375  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||| ||||||||||||||||| ||| |||| | ||| | ||||||||||||||    
T  2154 catggttgaaggaaggcttataagaattgtttggtactccctatataaacaagatgcatcttctttttggtagcccattccttaagaactccacag 2249  T

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Target: scaffold0557; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 141 - 274
Target Start/End: Original strand, 660 - 793
Alignment:
Q  141 tgtaacacccaaggctgacgagggcgaggagtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacaccg 240  Q
    ||||||||| |||||||||||||  | ||||||| |||  ||||| |||||||||||||||||| ||||||||| ||| || | ||| ||||||||| ||    
T  660 tgtaacacctaaggctgacgaggcaggggagtgaccgctggtgcacaaggtacgacaatgagcggctcccgacaacttatagaggaaccgaatcacatcg 759  T
Q  241 gaatgatagggatcccgaggccgtgcaggtatgg 274  Q
    |||||| |||||||| |||||| || ||||||||    
T  760 gaatgagagggatcctgaggccatgtaggtatgg 793  T

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Target: scaffold0442 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0442
Description:

Target: scaffold0442; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 141 - 274
Target Start/End: Original strand, 2414 - 2548
Alignment:
Q  141 tgtaacacccaaggctgacgagggcgagg-agtgatcgccagtgcataaggtacgacaatgagcgactcccgacagcttctaaatgaatcgaatcacacc 239  Q
    ||||||||| ||||||||| ||||| ||| |||||||||| ||||| |||| ||||||||||||| ||||||| | ||| || | ||| ||||||||| |    
T  2414 tgtaacacctaaggctgacaagggcaagggagtgatcgccggtgcacaaggcacgacaatgagcggctcccgaaaacttatagaggaaccgaatcacatc 2513  T
Q  240 ggaatgatagggatcccgaggccgtgcaggtatgg 274  Q
     |||||| |||||||| |||||| || ||||||||    
T  2514 agaatgagagggatcctgaggccatgtaggtatgg 2548  T

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Target: scaffold0391 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0391
Description:

Target: scaffold0391; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 284 - 339
Target Start/End: Original strand, 14794 - 14849
Alignment:
Q  284 gttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatc 339  Q
    |||||||||| ||||||||||||||||||||| |||||||||||| ||||||||||    
T  14794 gttgaaggaatgcttataagaattgtttggtaatacctatatcaataagatgcatc 14849  T

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Target: scaffold0101 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 284 - 342
Target Start/End: Original strand, 45439 - 45497
Alignment:
Q  284 gttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttc 342  Q
    ||||||||||  ||||| |||||| ||||||||||||||||||||||||||| ||||||    
T  45439 gttgaaggaagacttatgagaattatttggtactacctatatcaacaagatgtatcttc 45497  T

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Target: scaffold0036 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 295 - 372
Target Start/End: Original strand, 26134 - 26211
Alignment:
Q  295 gcttataagaattgtttggtactacctatatcaacaagatgcatcttctctttagtagtctatttcataagaactcca 372  Q
    |||||||  |||| ||||||||||| |||||||||| |||||||||||| ||| ||||   |||| ||||||||||||    
T  26134 gcttatacaaattttttggtactacatatatcaacatgatgcatcttctttttggtagctcattttataagaactcca 26211  T

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Target: scaffold0389 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0389
Description:

Target: scaffold0389; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 317 - 375
Target Start/End: Complemental strand, 13593 - 13535
Alignment:
Q  317 tacctatatcaacaagatgcatcttctctttagtagtctatttcataagaactccacag 375  Q
    ||||||||||||||||||||||||||| ||  ||||   ||| ||||||||||||||||    
T  13593 tacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacag 13535  T

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