View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15993_high_8 (Length: 256)
Name: NF15993_high_8
Description: NF15993
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15993_high_8 |
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Alignment Details
Target: chr5 (Bit Score: 206; Significance: 1e-113; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 19 - 240
Target Start/End: Original strand, 40986185 - 40986406
Alignment:
| Q |
19 |
tgagtttcagcgaggaacacccttacacctcaatgatggctccaaaggcaaattcaatgaatgcaatgtgaggatcgttaatgagaactcttcccaagtt |
118 |
Q |
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| T |
40986185 |
tgagttacagcgaggaacacccttacacctcaatgatggctccaaaggcaaattcaatgaatgcaatgtgaggatcgttaatgagaactcttcccaagtt |
40986284 |
T |
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| Q |
119 |
cacagatgagagtcattgaagaggataacaaacccagggcttcacctaccaagacctggagattttgtgaaaaagtaaacgtacatgccacatagaaaac |
218 |
Q |
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|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
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| T |
40986285 |
cacagatgagagtcattgaagaggataacaaacctagggcttcacctaccaagacctggagattttgtgaaaaagtaaacgtacatgccgcatagaaaac |
40986384 |
T |
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| Q |
219 |
aacttaagaatccaaatacaca |
240 |
Q |
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|||||||||||||||| ||||| |
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| T |
40986385 |
aacttaagaatccaaacacaca |
40986406 |
T |
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