View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15996_high_6 (Length: 369)

Name: NF15996_high_6
Description: NF15996
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15996_high_6
NF15996_high_6
[»] chr1 (36 HSPs)
chr1 (183-353)||(48722269-48722439)
chr1 (183-355)||(30899649-30899823)
chr1 (183-353)||(2-172)
chr1 (183-347)||(10109721-10109885)
chr1 (183-353)||(28885570-28885740)
chr1 (195-353)||(6150716-6150875)
chr1 (183-353)||(17487182-17487352)
chr1 (195-347)||(20905197-20905350)
chr1 (183-353)||(18127836-18128006)
chr1 (183-353)||(29207997-29208167)
chr1 (189-355)||(14084605-14084772)
chr1 (224-347)||(33124571-33124693)
chr1 (183-353)||(50552490-50552660)
chr1 (183-353)||(51110000-51110170)
chr1 (183-347)||(52055553-52055716)
chr1 (245-353)||(12884099-12884206)
chr1 (195-346)||(30004819-30004969)
chr1 (195-346)||(27703442-27703591)
chr1 (183-352)||(25930600-25930768)
chr1 (183-302)||(52240435-52240554)
chr1 (195-355)||(50371127-50371286)
chr1 (246-346)||(12971408-12971507)
chr1 (224-346)||(5560485-5560606)
chr1 (246-346)||(17674317-17674416)
chr1 (246-346)||(42740112-42740211)
chr1 (246-353)||(13120829-13120935)
chr1 (195-346)||(15441292-15441441)
chr1 (253-346)||(24556808-24556900)
chr1 (277-329)||(1269570-1269622)
chr1 (246-346)||(22386799-22386899)
chr1 (246-346)||(44836688-44836783)
chr1 (277-347)||(6333509-6333579)
chr1 (246-346)||(37873725-37873824)
chr1 (183-246)||(20470713-20470777)
chr1 (291-346)||(3907473-3907528)
chr1 (303-347)||(32810370-32810414)
[»] chr4 (27 HSPs)
chr4 (183-355)||(41038243-41038415)
chr4 (183-353)||(27632393-27632563)
chr4 (183-347)||(23426065-23426229)
chr4 (183-353)||(53011707-53011877)
chr4 (183-353)||(44478034-44478205)
chr4 (183-353)||(19661374-19661544)
chr4 (183-353)||(32130689-32130859)
chr4 (183-353)||(11681641-11681811)
chr4 (183-353)||(11689920-11690090)
chr4 (183-353)||(28463487-28463657)
chr4 (183-353)||(23256589-23256758)
chr4 (183-349)||(29221520-29221686)
chr4 (183-353)||(29579875-29580045)
chr4 (183-346)||(5545331-5545493)
chr4 (183-347)||(16072595-16072763)
chr4 (246-346)||(35653943-35654042)
chr4 (246-353)||(10575486-10575592)
chr4 (195-342)||(21791461-21791605)
chr4 (279-347)||(45172640-45172708)
chr4 (253-346)||(43154758-43154850)
chr4 (253-346)||(55134210-55134303)
chr4 (195-346)||(22423686-22423837)
chr4 (246-346)||(34982226-34982325)
chr4 (183-309)||(51066324-51066449)
chr4 (279-346)||(24449128-24449195)
chr4 (183-247)||(16887882-16887947)
chr4 (287-323)||(51066667-51066703)
[»] chr2 (34 HSPs)
chr2 (183-353)||(26151646-26151816)
chr2 (183-347)||(25222324-25222488)
chr2 (183-353)||(4855988-4856158)
chr2 (183-353)||(19367318-19367488)
chr2 (183-353)||(42411457-42411627)
chr2 (183-353)||(45618972-45619141)
chr2 (183-355)||(41096436-41096609)
chr2 (183-353)||(7993627-7993798)
chr2 (183-353)||(2063800-2063970)
chr2 (183-353)||(13020418-13020588)
chr2 (183-353)||(6530654-6530824)
chr2 (183-352)||(18676209-18676379)
chr2 (183-317)||(36481425-36481559)
chr2 (245-353)||(34061817-34061925)
chr2 (195-353)||(45042384-45042543)
chr2 (199-323)||(42759671-42759795)
chr2 (183-353)||(12269420-12269589)
chr2 (246-353)||(18172903-18173009)
chr2 (246-346)||(15457502-15457602)
chr2 (224-346)||(38985651-38985771)
chr2 (279-346)||(1418911-1418978)
chr2 (253-355)||(27302498-27302599)
chr2 (253-346)||(13997316-13997408)
chr2 (279-346)||(18916049-18916116)
chr2 (279-346)||(39081400-39081467)
chr2 (240-346)||(36059863-36059967)
chr2 (246-346)||(38599404-38599502)
chr2 (195-346)||(31273078-31273228)
chr2 (246-323)||(17117608-17117684)
chr2 (246-346)||(21747193-21747292)
chr2 (277-330)||(13001655-13001708)
chr2 (246-346)||(29480600-29480699)
chr2 (253-353)||(1226236-1226336)
chr2 (277-330)||(9029622-9029675)
[»] chr5 (29 HSPs)
chr5 (183-347)||(12661310-12661474)
chr5 (183-347)||(13656211-13656375)
chr5 (183-353)||(13474625-13474795)
chr5 (183-347)||(13423865-13424029)
chr5 (183-347)||(19099213-19099377)
chr5 (183-353)||(26377672-26377843)
chr5 (183-305)||(26312027-26312153)
chr5 (246-346)||(138146-138245)
chr5 (246-346)||(42291844-42291943)
chr5 (244-353)||(36718526-36718636)
chr5 (246-346)||(17513899-17513998)
chr5 (246-346)||(43511620-43511719)
chr5 (279-346)||(20975987-20976054)
chr5 (246-353)||(29156185-29156291)
chr5 (253-346)||(4734552-4734644)
chr5 (246-346)||(5829387-5829484)
chr5 (246-346)||(10591236-10591335)
chr5 (279-348)||(18873457-18873526)
chr5 (195-346)||(40956315-40956465)
chr5 (246-344)||(7390363-7390460)
chr5 (279-345)||(33281677-33281743)
chr5 (246-339)||(3349692-3349784)
chr5 (246-345)||(17325847-17325946)
chr5 (253-346)||(931382-931469)
chr5 (293-346)||(27351351-27351404)
chr5 (253-323)||(10033572-10033641)
chr5 (253-346)||(40779194-40779286)
chr5 (279-339)||(16515533-16515593)
chr5 (291-346)||(23069222-23069277)
[»] chr3 (34 HSPs)
chr3 (183-355)||(28132635-28132806)
chr3 (183-347)||(52655022-52655186)
chr3 (183-353)||(21784682-21784853)
chr3 (183-353)||(23164471-23164641)
chr3 (183-353)||(24252615-24252785)
chr3 (183-353)||(29387653-29387823)
chr3 (183-353)||(27729668-27729838)
chr3 (183-347)||(25598986-25599149)
chr3 (183-347)||(46791596-46791760)
chr3 (183-353)||(8364167-8364338)
chr3 (183-353)||(18408186-18408356)
chr3 (183-353)||(51939454-51939625)
chr3 (195-353)||(41706963-41707124)
chr3 (189-349)||(13401458-13401619)
chr3 (183-323)||(6715464-6715604)
chr3 (236-353)||(54430547-54430663)
chr3 (183-345)||(20762052-20762214)
chr3 (183-353)||(23067623-23067794)
chr3 (183-291)||(27110771-27110879)
chr3 (246-346)||(36538149-36538248)
chr3 (277-346)||(7767065-7767134)
chr3 (279-346)||(27303189-27303256)
chr3 (253-346)||(48626999-48627091)
chr3 (246-346)||(42009225-42009324)
chr3 (246-346)||(50677277-50677376)
chr3 (279-346)||(21596337-21596404)
chr3 (224-341)||(15987207-15987322)
chr3 (253-346)||(19965850-19965942)
chr3 (279-346)||(46904744-46904811)
chr3 (198-336)||(51146949-51147085)
chr3 (246-348)||(1255015-1255114)
chr3 (279-346)||(40152124-40152192)
chr3 (283-346)||(4207357-4207416)
chr3 (282-355)||(1649829-1649902)
[»] chr8 (25 HSPs)
chr8 (195-353)||(13585294-13585452)
chr8 (195-349)||(18420520-18420674)
chr8 (184-355)||(7858078-7858249)
chr8 (195-353)||(3471595-3471753)
chr8 (189-353)||(43926228-43926392)
chr8 (183-347)||(43967969-43968133)
chr8 (183-347)||(18112117-18112282)
chr8 (195-347)||(44664957-44665109)
chr8 (183-347)||(1004059-1004222)
chr8 (233-353)||(27074569-27074688)
chr8 (245-347)||(42951726-42951832)
chr8 (195-349)||(32098090-32098243)
chr8 (246-346)||(34523914-34524013)
chr8 (253-353)||(3628717-3628816)
chr8 (196-310)||(36515069-36515182)
chr8 (277-346)||(5869315-5869384)
chr8 (246-346)||(12531561-12531660)
chr8 (279-346)||(39697933-39698000)
chr8 (193-346)||(29372359-29372510)
chr8 (253-346)||(23567244-23567336)
chr8 (254-342)||(30915258-30915346)
chr8 (224-330)||(42777763-42777867)
chr8 (245-346)||(42076110-42076212)
chr8 (254-346)||(33452793-33452885)
chr8 (279-346)||(35874928-35874995)
[»] chr7 (33 HSPs)
chr7 (183-353)||(12251187-12251357)
chr7 (183-355)||(33910057-33910229)
chr7 (183-353)||(6379983-6380153)
chr7 (183-352)||(36796270-36796440)
chr7 (183-347)||(11672587-11672751)
chr7 (183-352)||(33419016-33419186)
chr7 (183-353)||(44893928-44894098)
chr7 (183-353)||(42161021-42161189)
chr7 (183-353)||(18015479-18015651)
chr7 (224-353)||(4099963-4100092)
chr7 (234-352)||(46221654-46221771)
chr7 (195-353)||(7636236-7636395)
chr7 (246-346)||(26633365-26633464)
chr7 (253-346)||(26282510-26282604)
chr7 (195-346)||(32956777-32956927)
chr7 (282-346)||(40001694-40001758)
chr7 (253-355)||(773852-773955)
chr7 (246-345)||(42312012-42312110)
chr7 (252-343)||(3799730-3799819)
chr7 (195-346)||(36438264-36438413)
chr7 (191-340)||(41852208-41852356)
chr7 (253-346)||(44876126-44876217)
chr7 (247-348)||(18895361-18895461)
chr7 (246-346)||(1366011-1366110)
chr7 (243-346)||(30739125-30739227)
chr7 (279-346)||(41908180-41908247)
chr7 (246-346)||(7366689-7366788)
chr7 (281-353)||(8358291-8358363)
chr7 (279-346)||(9479129-9479196)
chr7 (287-346)||(40737994-40738053)
chr7 (279-324)||(25610090-25610135)
chr7 (246-347)||(40841208-40841308)
chr7 (294-346)||(25061905-25061957)
[»] chr6 (24 HSPs)
chr6 (183-353)||(57683-57853)
chr6 (183-353)||(2618350-2618520)
chr6 (183-353)||(3514749-3514919)
chr6 (183-347)||(6754207-6754371)
chr6 (183-353)||(6360755-6360924)
chr6 (195-353)||(628007-628164)
chr6 (183-353)||(12614617-12614785)
chr6 (224-347)||(29149404-29149526)
chr6 (195-353)||(7525078-7525235)
chr6 (224-352)||(29401136-29401263)
chr6 (190-340)||(22503751-22503901)
chr6 (279-346)||(3748563-3748630)
chr6 (282-346)||(31861003-31861067)
chr6 (279-346)||(30915361-30915428)
chr6 (195-323)||(6294279-6294405)
chr6 (246-346)||(29308430-29308529)
chr6 (279-346)||(1690628-1690695)
chr6 (253-346)||(21946109-21946201)
chr6 (279-346)||(14893412-14893479)
chr6 (246-346)||(1093004-1093102)
chr6 (279-346)||(19231615-19231681)
chr6 (183-247)||(31258471-31258536)
chr6 (279-346)||(350416-350484)
chr6 (303-346)||(31234913-31234956)
[»] scaffold0126 (1 HSPs)
scaffold0126 (183-353)||(16705-16875)
[»] scaffold0181 (1 HSPs)
scaffold0181 (183-355)||(17031-17203)
[»] scaffold0564 (1 HSPs)
scaffold0564 (189-323)||(1086-1220)
[»] scaffold0035 (1 HSPs)
scaffold0035 (183-323)||(22704-22844)
[»] scaffold0100 (1 HSPs)
scaffold0100 (195-353)||(46086-46242)
[»] scaffold0606 (1 HSPs)
scaffold0606 (277-353)||(8388-8464)


Alignment Details
Target: chr1 (Bit Score: 112; Significance: 1e-56; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 183 - 353
Target Start/End: Original strand, 48722269 - 48722439
Alignment:
Q  183 taagtaaaagatgtgaaatttatctaacagtgtggtttgcatt-gtcactactctgttgtggaaaaagggtaaaacgaatgatttatgcgaagagaaaaa 281  Q
    ||||||||||| |||||||||||||||| |||| ||||| ||| |||||| ||||||||||||||| |||||||||||||| |||||||||||| |||||    
T  48722269 taagtaaaagaggtgaaatttatctaacggtgtcgtttggatttgtcactcctctgttgtggaaaa-gggtaaaacgaatggtttatgcgaagaaaaaaa 48722367  T
Q  282 tgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaattaagggtg 353  Q
    |||||||||||||| ||||||||||||||||||||||||||| | ||||||||||||||||||||| |||||    
T  48722368 tgattgttgtgattatttcaatgaaatagctttccaaattgactgattaagtgattatacaaattaggggtg 48722439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 183 - 355
Target Start/End: Complemental strand, 30899823 - 30899649
Alignment:
Q  183 taagtaaaagatgtgaaatttatctaacagtgtggtttgcatt-gtcactactctgttgtggaaaaagggtaaaacgaatgatttatgcgaagagaaaaa 281  Q
    ||||| ||||| |||||||||||||||| |||| ||||| ||| |||| | ||||||||||||||| |||||||||||||| |||||||||||| |||||    
T  30899823 taagtgaaagaggtgaaatttatctaacggtgtcgtttggatttgtcattcctctgttgtggaaaa-gggtaaaacgaatggtttatgcgaagaaaaaaa 30899725  T
Q  282 --tgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaattaagggtgat 355  Q
      |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||    
T  30899724 aatgattgttgtgattctttcaatgaaatagctttccaaattgactaattaagtgattatacaaattaggggtgat 30899649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 183 - 353
Target Start/End: Complemental strand, 172 - 2
Alignment:
Q  183 taagtaaaagatgtgaaatttatctaacagtgtggtttgcatt-gtcactactctgttgtggaaaaagggtaaaacgaatgatttatgcgaagagaaaaa 281  Q
    ||||| ||||| |||||||||||||||| |||| ||||| ||| |||||| ||||||||| ||||| |||||||||||||| |||||||||||| |||||    
T  172 taagtgaaagaggtgaaatttatctaacggtgtcgtttggatttgtcactcctctgttgtagaaaa-gggtaaaacgaatggtttatgcgaagaaaaaaa 74  T
Q  282 tgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaattaagggtg 353  Q
    |||||||||||||||||||||||||||  ||||||||||||| | |||||||||||||||||||||||||||    
T  73 tgattgttgtgattctttcaatgaaatcactttccaaattgactgattaagtgattatacaaattaagggtg 2  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 183 - 347
Target Start/End: Complemental strand, 10109885 - 10109721
Alignment:
Q  183 taagtaaaagatgtgaaatttatctaacagtgtggtttgcatt-gtcactactctgttgtggaaaaagggtaaaacgaatgatttatgcgaagagaaaaa 281  Q
    ||||| ||||| |||||||||||||||| | || ||||| ||| |||||| ||||||||||||||| |||||||||||||  |||||||||||| |||||    
T  10109885 taagtgaaagaggtgaaatttatctaacggcgtcgtttggatttgtcactcctctgttgtggaaaa-gggtaaaacgaatagtttatgcgaagaaaaaaa 10109787  T
Q  282 tgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaatta 347  Q
    ||||||||||||||||||||||||||| |||||||||||||| | |||||||||||||||||||||    
T  10109786 tgattgttgtgattctttcaatgaaattgctttccaaattgactgattaagtgattatacaaatta 10109721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 183 - 353
Target Start/End: Original strand, 28885570 - 28885740
Alignment:
Q  183 taagtaaaagatgtgaaatttatctaacagtgtggtttgcatt-gtcactactctgttgtggaaaaagggtaaaacgaatgatttatgcgaagagaaaaa 281  Q
    ||||| ||||| |||||||||||||||| |||| ||||| ||| ||||||  ||||||||||||||||  ||||||||||| |||||||||||| |||||    
T  28885570 taagtgaaagaggtgaaatttatctaacggtgtcgtttggatttgtcactcatctgttgtggaaaaaga-taaaacgaatggtttatgcgaagaaaaaaa 28885668  T
Q  282 tgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaattaagggtg 353  Q
    ||||||||||||||||| |||||||||||||||| ||||||| | ||||||||||||||||||||| |||||    
T  28885669 tgattgttgtgattcttacaatgaaatagctttcaaaattgattgattaagtgattatacaaattatgggtg 28885740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 195 - 353
Target Start/End: Complemental strand, 6150875 - 6150716
Alignment:
Q  195 gtgaaatttatctaacagtgtggtttgcatt-gtcactactctgttgtggaaaaagggtaaaacgaatgatttatgcgaagagaaaaatgattgttgtga 293  Q
    |||||||||||||||| |||| ||||| ||| |||||| |||||||||||||||| ||||||||||||| |||||| ||||| |||| ||||||||||||    
T  6150875 gtgaaatttatctaacggtgtcgtttggatttgtcactcctctgttgtggaaaaaaggtaaaacgaatggtttatgtgaagaaaaaattgattgttgtga 6150776  T
Q  294 ttctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaattaagggtg 353  Q
    ||||||||||||||||||||| |||||||| | ||||| |||||||| |||||| |||||    
T  6150775 ttctttcaatgaaatagcttttcaaattgactgattaaatgattatataaattaggggtg 6150716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 183 - 353
Target Start/End: Original strand, 17487182 - 17487352
Alignment:
Q  183 taagtaaaagatgtgaaatttatctaacagtgtggtttgcatt-gtcactactctgttgtggaaaaagggtaaaacgaatgatttatgcgaagagaaaaa 281  Q
    ||||| ||||| |||||||||||||||| | || ||||| ||| |||||| ||||||||||||||| || ||||||||||| ||||||| |||| |||||    
T  17487182 taagtgaaagaggtgaaatttatctaacggcgttgtttggatttgtcactcctctgttgtggaaaa-ggataaaacgaatggtttatgcaaagaaaaaaa 17487280  T
Q  282 tgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaattaagggtg 353  Q
    |||||||||||||||||||||||||||| ||||||||||||| | |||||||||||||| |||||| |||||    
T  17487281 tgattgttgtgattctttcaatgaaataactttccaaattgatttattaagtgattatataaattaggggtg 17487352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 195 - 347
Target Start/End: Original strand, 20905197 - 20905350
Alignment:
Q  195 gtgaaatttatctaacagtgtggtttgcatt-gtcactactctgttgtggaaaaagggtaaaacgaatgatttatgcgaagagaaaaatgattgttgtga 293  Q
    |||||||||||| ||| |||| ||||| ||| |||||| |||||||||||||||||||||||||||||| ||||| |||||| |||||| ||||||||||    
T  20905197 gtgaaatttatccaacggtgtcgtttggatttgtcactcctctgttgtggaaaaagggtaaaacgaatggtttatacgaagaaaaaaattattgttgtga 20905296  T
Q  294 ttctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaatta 347  Q
    |||||||||||||||||  ||||||||||| | | |||||||||||||||||||    
T  20905297 ttctttcaatgaaatagacttccaaattgactgaataagtgattatacaaatta 20905350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 183 - 353
Target Start/End: Original strand, 18127836 - 18128006
Alignment:
Q  183 taagtaaaagatgtgaaatttatctaacagtgtggtttgcatt-gtcactactctgttgtggaaaaagggtaaaacgaatgatttatgcgaagagaaaaa 281  Q
    ||||| ||||| || ||||||| ||||| |||| ||||| ||| |||||| || |||||||||||| |||||||||||||  |||||||||||| |||||    
T  18127836 taagtgaaagaggtaaaatttacctaacggtgtcgtttggatttgtcactcctttgttgtggaaaa-gggtaaaacgaatagtttatgcgaagaaaaaaa 18127934  T
Q  282 tgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaattaagggtg 353  Q
    | ||||||||||||||| ||||||||||||||| |||||||| | ||||||||||||||||||||| |||||    
T  18127935 taattgttgtgattcttgcaatgaaatagcttttcaaattgactgattaagtgattatacaaattatgggtg 18128006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 183 - 353
Target Start/End: Original strand, 29207997 - 29208167
Alignment:
Q  183 taagtaaaagatgtgaaatttatctaacagtgtggtttgcatt-gtcactactctgttgtggaaaaagggtaaaacgaatgatttatgcgaagagaaaaa 281  Q
    |||||||||||  ||||||||||| ||| ||||  |||| ||| |||||| |||| |||||||||| |||||||||||||| |||||||||||| |||||    
T  29207997 taagtaaaagagatgaaatttatccaacggtgtcatttggatttgtcactcctctattgtggaaaa-gggtaaaacgaatggtttatgcgaagaaaaaaa 29208095  T
Q  282 tgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaattaagggtg 353  Q
    |||||||||||||||||||||||||||||  ||||| ||||| | ||||| ||||||||||||||| |||||    
T  29208096 tgattgttgtgattctttcaatgaaatagacttccagattgactgattaaatgattatacaaattaggggtg 29208167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 189 - 355
Target Start/End: Original strand, 14084605 - 14084772
Alignment:
Q  189 aaagatgtgaaatttatctaacagtgtggtttgcatt-gtcactactctgttgtggaaaaagggtaaaacgaatgatttatgcgaagagaaaaat-gatt 286  Q
    ||||| |||||||||||||||  |||| ||||| ||| |||||| |||||||||||| || |||||||||||||| |||||||||||| |||||| ||||    
T  14084605 aaagaggtgaaatttatctaatggtgtcgtttggatttgtcactcctctgttgtggagaa-gggtaaaacgaatggtttatgcgaagaaaaaaattgatt 14084703  T
Q  287 gttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaattaagggtgat 355  Q
     |||||||||||||||||||||||||||| ||||||| | ||||||||||||||||  ||| |||||||    
T  14084704 attgtgattctttcaatgaaatagctttctaaattgactgattaagtgattatacattttaggggtgat 14084772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 224 - 347
Target Start/End: Original strand, 33124571 - 33124693
Alignment:
Q  224 ttgtcactactctgttgtggaaaaagggtaaaacgaatgatttatgcgaagagaaaaatgattgttgtgattctttcaatgaaatagctttccaaattga 323  Q
    |||||||| ||||||||||||||| || || |||||||| |||||| ||||| |||||||||||||||||||||||||||||||||||||| ||||||||    
T  33124571 ttgtcactcctctgttgtggaaaatgg-tataacgaatggtttatgtgaagaaaaaaatgattgttgtgattctttcaatgaaatagcttttcaaattga 33124669  T
Q  324 gtaattaagtgattatacaaatta 347  Q
     | |||||||||||||||||||||    
T  33124670 cttattaagtgattatacaaatta 33124693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 183 - 353
Target Start/End: Complemental strand, 50552660 - 50552490
Alignment:
Q  183 taagtaaaagatgtgaaatttatctaacagtgtggtttgcatt-gtcactactctgttgtggaaaaagggtaaaacgaatgatttatgcgaagagaaaaa 281  Q
    ||||| |||||  ||||||||||||||  |||| ||||| ||| |||||| || ||||||||||||||| ||||| ||||| ||||| |||||| |||||    
T  50552660 taagtgaaagagatgaaatttatctaatggtgtcgtttggatttgtcactcctatgttgtggaaaaagg-taaaatgaatggtttatacgaagaaaaaaa 50552562  T
Q  282 tgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaattaagggtg 353  Q
    |||||||||||||||||||||||||||| |||| ||||||||   ||||||||||||||||||||| |||||    
T  50552561 tgattgttgtgattctttcaatgaaataacttttcaaattgaccgattaagtgattatacaaattaggggtg 50552490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 183 - 353
Target Start/End: Original strand, 51110000 - 51110170
Alignment:
Q  183 taagtaaaagatgtgaaatttatctaacagtgtggtttgcatt-gtcactactctgttgtggaaaaagggtaaaacgaatgatttatgcgaagagaaaaa 281  Q
    ||||| ||||| |||||||||||||||| ||||  |||| ||| |||||| || |||||||||||| || |||||| |||| |||||||||||| ||||     
T  51110000 taagtgaaagaggtgaaatttatctaacggtgtcatttgaatttgtcactcctttgttgtggaaaa-ggataaaacaaatggtttatgcgaagaaaaaac 51110098  T
Q  282 tgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaattaagggtg 353  Q
    | |||||||||||||||||||||||||||||||| ||||||| | |||||||||||||| |||||| |||||    
T  51110099 ttattgttgtgattctttcaatgaaatagctttctaaattgactgattaagtgattatagaaattaggggtg 51110170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 183 - 347
Target Start/End: Complemental strand, 52055716 - 52055553
Alignment:
Q  183 taagtaaaagatgtgaaatttatctaacagtgtggtttgcatt-gtcactactctgttgtggaaaaagggtaaaacgaatgatttatgcgaagagaaaaa 281  Q
    ||||| ||||| || ||||||||||||| |||| ||||  ||| |||||| |||| ||||| |||| |||||||||||||| |||||||||||  ||||     
T  52055716 taagtgaaagaggtaaaatttatctaacggtgtcgtttagatttgtcactcctct-ttgtgtaaaa-gggtaaaacgaatggtttatgcgaaggaaaaac 52055619  T
Q  282 tgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaatta 347  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||| ||||||    
T  52055618 tgattgttgtgattctttcaatgaaatagctttccaaattgattgattaagtgattatataaatta 52055553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 245 - 353
Target Start/End: Original strand, 12884099 - 12884206
Alignment:
Q  245 aaaagggtaaaacgaatgatttatgcgaagagaaaaatgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaa 344  Q
    |||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||  ||||||| | ||||||||||||||||||    
T  12884099 aaaagggtaaaacgaatggtttatgcgaaga-aaaaatgattgttgtgattctttcaatgaaatagctttttaaattgactgattaagtgattatacaaa 12884197  T
Q  345 ttaagggtg 353  Q
    ||| |||||    
T  12884198 ttaggggtg 12884206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 195 - 346
Target Start/End: Original strand, 30004819 - 30004969
Alignment:
Q  195 gtgaaatttatctaacagtgtggtttgcatt-gtcactactctgttgtggaaaaagggtaaaacgaatgatttatgcgaagagaaaaatgattgttgtga 293  Q
    |||||||||||||||| || | ||||| ||| |||||| |||||||||||||||||| ||||||||||| |||||| ||||| | |||||||||||| ||    
T  30004819 gtgaaatttatctaacggtatcgtttgaatttgtcactcctctgttgtggaaaaagg-taaaacgaatggtttatgggaaga-acaaatgattgttgcga 30004916  T
Q  294 ttctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaatt 346  Q
    ||||||||||||||||||||| |||||| | | ||||||||||||||||||||    
T  30004917 ttctttcaatgaaatagcttttcaaattaattgattaagtgattatacaaatt 30004969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 195 - 346
Target Start/End: Original strand, 27703442 - 27703591
Alignment:
Q  195 gtgaaatttatctaacagtgtggtttgcattgtcactactctgttgtggaaaaagggtaaaacgaatgatttatgcgaagagaaaaatgattgttgtgat 294  Q
    |||||||||| |||||||||| ||||| |||||||||  || || |||||||| ||| |||||||||| |||||||||| |  ||| |||||||||||||    
T  27703442 gtgaaatttacctaacagtgtcgtttggattgtcactcttccgtggtggaaaa-gggaaaaacgaatggtttatgcgaaaatgaaa-tgattgttgtgat 27703539  T
Q  295 tctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaatt 346  Q
    |||||| |||||||||||||||||||||| | ||||||||||||||||||||    
T  27703540 tctttcgatgaaatagctttccaaattgactgattaagtgattatacaaatt 27703591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 183 - 352
Target Start/End: Complemental strand, 25930768 - 25930600
Alignment:
Q  183 taagtaaaagatgtgaaatttatctaacagtgtggtttgcatt-gtcactactctgttgtggaaaaagggtaaaacgaatgatttatgcgaagagaaaaa 281  Q
    ||||| |||||  ||||||||||||||| |||| ||||| ||| ||||||  |||||||||||||| ||||||||| |||| ||||| | |||| |||||    
T  25930768 taagtgaaagagatgaaatttatctaacggtgtcgtttggatttgtcactcatctgttgtggaaaa-gggtaaaacaaatggtttatccaaaga-aaaaa 25930671  T
Q  282 tgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaattaagggt 352  Q
    ||||||||||||| ||||||||||||||||||| ||| |||| | ||||||||||||||||||||| ||||    
T  25930670 tgattgttgtgatcctttcaatgaaatagcttttcaagttgactgattaagtgattatacaaattaggggt 25930600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 183 - 302
Target Start/End: Original strand, 52240435 - 52240554
Alignment:
Q  183 taagtaaaagatgtgaaatttatctaacagtgtggtttgcatt-gtcactactctgttgtggaaaaagggtaaaacgaatgatttatgcgaagagaaaaa 281  Q
    ||||| ||||| ||||||||||||||||||||| ||||| ||| ||| || ||||||||||||||| ||| |||| |||||||||||||||||| |||||    
T  52240435 taagtgaaagaggtgaaatttatctaacagtgtcgtttgaatttgtcgctcctctgttgtggaaaa-gggcaaaatgaatgatttatgcgaagaaaaaaa 52240533  T
Q  282 tgattgttgtgattctttcaa 302  Q
    |||||||||||||||||||||    
T  52240534 tgattgttgtgattctttcaa 52240554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 195 - 355
Target Start/End: Complemental strand, 50371286 - 50371127
Alignment:
Q  195 gtgaaatttatctaacagtgtggtttgcatt-gtcactactctgttgtggaaaaagggtaaaacgaatgatttatgcgaagagaaaaatgattgttgtga 293  Q
    |||||||||| |||||  ||| ||||| ||| |||||| ||| |||||||  || ||| ||||| ||||||||||||||| | | |||||||||||||||    
T  50371286 gtgaaatttacctaacgatgttgtttggatttgtcactcctccgttgtgggtaa-gggaaaaactaatgatttatgcgaaaa-agaaatgattgttgtga 50371189  T
Q  294 ttctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaattaagggtgat 355  Q
    |||||||||||||| || ||| |||||||| | |||||||||||||||||||| ||||||||    
T  50371188 ttctttcaatgaaacagtttttcaaattgactgattaagtgattatacaaattgagggtgat 50371127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 246 - 346
Target Start/End: Complemental strand, 12971507 - 12971408
Alignment:
Q  246 aaagggtaaaacgaatgatttatgcgaagagaaaaatgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaat 345  Q
    |||||| |||||||||| |||||| ||| | | |||||||||||||||||||||| ||||||||||||| |||||||| | |||||||||||||||||||    
T  12971507 aaaggggaaaacgaatggtttatgtgaaaa-agaaatgattgttgtgattctttcgatgaaatagcttttcaaattgactgattaagtgattatacaaat 12971409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 224 - 346
Target Start/End: Complemental strand, 5560606 - 5560485
Alignment:
Q  224 ttgtcactactctgttgtggaaaaagggtaaaacgaatgatttatgcgaagagaaaaatgattgttgtgattctttcaatgaaatagctttccaaattga 323  Q
    |||||||| ||| ||||||| ||||| | |||| ||||  |||||||| | | ||| ||||||||||||||||||||||||||||| ||||  |||||||    
T  5560606 ttgtcactcctccgttgtgggaaaagag-aaaatgaatagtttatgcggaaaaaaatatgattgttgtgattctttcaatgaaataactttttaaattga 5560508  T
Q  324 gtaattaagtgattatacaaatt 346  Q
     | ||||||||||||||||||||    
T  5560507 ctgattaagtgattatacaaatt 5560485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 246 - 346
Target Start/End: Original strand, 17674317 - 17674416
Alignment:
Q  246 aaagggtaaaacgaatgatttatgcgaagagaaaaatgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaat 345  Q
    |||||| ||||| |||| |||||||||| | | |||| ||||||||||||||||||||||||||| ||| |||||||| | ||||||||||||| |||||    
T  17674317 aaaggggaaaacaaatggtttatgcgaaaa-agaaataattgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 17674415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 246 - 346
Target Start/End: Complemental strand, 42740211 - 42740112
Alignment:
Q  246 aaagggtaaaacgaatgatttatgcgaagagaaaaatgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaat 345  Q
    |||||| |||||||||  |||||||||| | | |||| ||||||| ||||||||||||||||||| ||| |||||||| ||||||||| |||||||||||    
T  42740211 aaaggggaaaacgaattgtttatgcgaaaa-agaaataattgttgcgattctttcaatgaaatagtttttcaaattgactaattaagttattatacaaat 42740113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 246 - 353
Target Start/End: Original strand, 13120829 - 13120935
Alignment:
Q  246 aaagggtaaaacgaatgatttatgcgaagagaaaaatgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaat 345  Q
    |||||| |||| ||||| |||||||||| | | |||| ||||| ||||||||||||||||||||| ||| |||||||| | ||||||||||||| |||||    
T  13120829 aaaggggaaaatgaatggtttatgcgaaaa-agaaataattgtggtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 13120927  T
Q  346 taagggtg 353  Q
    ||| ||||    
T  13120928 taatggtg 13120935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 195 - 346
Target Start/End: Complemental strand, 15441441 - 15441292
Alignment:
Q  195 gtgaaatttatctaacagtgtggtttgcatt-gtcactactctgttgtggaaaaagggtaaaacgaatgatttatgcgaagagaaaaatgattgttgtga 293  Q
    |||||||||| ||||| | || ||||| ||| ||||||  |||||||||||||| ||  |||| ||||||||||||| || |  | ||| ||||||||||    
T  15441441 gtgaaatttacctaacggcgtcgtttggatttgtcactcttctgttgtggaaaaggg--aaaatgaatgatttatgcaaaaa--agaattattgttgtga 15441346  T
Q  294 ttctttc-aatgaaatagctttccaaattgagtaattaagtgattatacaaatt 346  Q
    ||||||  ||||||||||||||  ||||||||| ||||||||||||||||||||    
T  15441345 ttctttttaatgaaatagctttataaattgagtgattaagtgattatacaaatt 15441292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 253 - 346
Target Start/End: Complemental strand, 24556900 - 24556808
Alignment:
Q  253 aaaacgaatgatttatgcgaagagaaaaatgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaatt 346  Q
    |||||||||| |||||||||| | | |||| |||||||||||||||| |||||||||| ||| |||||||| | ||||||||||||| ||||||    
T  24556900 aaaacgaatggtttatgcgaaaa-agaaataattgttgtgattctttaaatgaaatagtttttcaaattgacttattaagtgattattcaaatt 24556808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 277 - 329
Target Start/End: Complemental strand, 1269622 - 1269570
Alignment:
Q  277 aaaaatgattgttgtgattctttcaatgaaatagctttccaaattgagtaatt 329  Q
    ||||||||||||||||||||||| |||||||||||||| |||||||| |||||    
T  1269622 aaaaatgattgttgtgattcttttaatgaaatagcttttcaaattgactaatt 1269570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 246 - 346
Target Start/End: Original strand, 22386799 - 22386899
Alignment:
Q  246 aaagggtaaaacgaatgatttatgcgaagagaaaaatgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaat 345  Q
    |||||| ||||| |||| ||||||| || | || | | ||||||||||||||||||||||||||| ||| |||||||| | ||||||||||| | |||||    
T  22386799 aaaggggaaaacaaatggtttatgcaaaaaaaatattaattgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattgttcaaat 22386898  T
Q  346 t 346  Q
    |    
T  22386899 t 22386899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 246 - 346
Target Start/End: Original strand, 44836688 - 44836783
Alignment:
Q  246 aaagggtaaaacgaatgatttatgcgaagagaaaaatgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaat 345  Q
    |||||| |||||||||| |||||||||| | | |||||||    |||||||||||| |||||||| ||| |||||||| | |||||||||||||||||||    
T  44836688 aaagggaaaaacgaatggtttatgcgaaaa-agaaatgat----gtgattctttcagtgaaatagtttttcaaattgactgattaagtgattatacaaat 44836782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 277 - 347
Target Start/End: Original strand, 6333509 - 6333579
Alignment:
Q  277 aaaaatgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaatta 347  Q
    ||||||||||||||||||||||| ||| ||||| |||||||| |||| | ||||||||||| |||| ||||    
T  6333509 aaaaatgattgttgtgattcttttaataaaataactttccaatttgactgattaagtgattttacagatta 6333579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 246 - 346
Target Start/End: Original strand, 37873725 - 37873824
Alignment:
Q  246 aaagggtaaaacgaatgatttatgcgaagagaa-aaatgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaa 344  Q
    |||||| |||||||||| |||||||  ||| || |||| |||||||||||||||||||||||| || ||| |||||| | | ||||||||| ||||||||    
T  37873725 aaaggggaaaacgaatggtttatgc--agaaaagaaataattgttgtgattctttcaatgaaacagtttttcaaattaactgattaagtgactatacaaa 37873822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 246
Target Start/End: Complemental strand, 20470777 - 20470713
Alignment:
Q  183 taagtaaaagatgtgaaatttatctaacagtgtggtttgca-ttgtcactactctgttgtggaaa 246  Q
    ||||| ||||| |||||||||||||||| |||| ||||| | |||||||| ||||||||||||||    
T  20470777 taagtgaaagaggtgaaatttatctaacggtgttgtttggatttgtcactcctctgttgtggaaa 20470713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 291 - 346
Target Start/End: Complemental strand, 3907528 - 3907473
Alignment:
Q  291 tgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaatt 346  Q
    |||||||||||||||||||  ||| |||||||| | ||||| ||||||||||||||    
T  3907528 tgattctttcaatgaaataatttttcaaattgattgattaaatgattatacaaatt 3907473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 303 - 347
Target Start/End: Original strand, 32810370 - 32810414
Alignment:
Q  303 tgaaatagctttccaaattgagtaattaagtgattatacaaatta 347  Q
    |||||||||||| |||||||| | ||||||||||||| |||||||    
T  32810370 tgaaatagcttttcaaattgattgattaagtgattattcaaatta 32810414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 110; Significance: 2e-55; HSPs: 27)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 183 - 355
Target Start/End: Complemental strand, 41038415 - 41038243
Alignment:
Q  183 taagtaaaagatgtgaaatttatctaacagtgtggtttgcatt-gtcactactctgttgtggaaaaagggtaaaacgaatgatttatgcgaagagaaaaa 281  Q
    ||||| ||||| |||||||||||||||| |||| ||||| ||| |||||| ||||||||||||||| |||||||||||||| |||||||||||| |||||    
T  41038415 taagtgaaagaggtgaaatttatctaacggtgtcgtttggatttgtcactcctctgttgtggaaaa-gggtaaaacgaatggtttatgcgaagaaaaaaa 41038317  T
Q  282 tgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaattaagggtgat 355  Q
    ||||||||||||||||||||||||||||| |||||||||||| | ||||||||||||||||||||| |||||||    
T  41038316 tgattgttgtgattctttcaatgaaatagttttccaaattgactgattaagtgattatacaaattaggggtgat 41038243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 183 - 353
Target Start/End: Complemental strand, 27632563 - 27632393
Alignment:
Q  183 taagtaaaagatgtgaaatttatctaacagtgtggtttgcatt-gtcactactctgttgtggaaaaagggtaaaacgaatgatttatgcgaagagaaaaa 281  Q
    ||||| ||||| |||||||||||||||| |||| ||||| ||| |||||||||||||||||||||| ||||||| ||||||||||||||||||| |||||    
T  27632563 taagtgaaagaggtgaaatttatctaacggtgttgtttggatttgtcactactctgttgtggaaaa-gggtaaagcgaatgatttatgcgaagaaaaaaa 27632465  T
Q  282 tgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaattaagggtg 353  Q
    |||||| |||||||||||||||||| ||||||| |||||||| ||||||||||||||||||||||| |||||    
T  27632464 tgattgatgtgattctttcaatgaagtagcttttcaaattgactaattaagtgattatacaaattaggggtg 27632393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 183 - 347
Target Start/End: Original strand, 23426065 - 23426229
Alignment:
Q  183 taagtaaaagatgtgaaatttatctaacagtgtggtttgcatt-gtcactactctgttgtggaaaaagggtaaaacgaatgatttatgcgaagagaaaaa 281  Q
    ||||| ||||| |||||||||||||||| | || ||||| ||| |||||| ||||||||||||||| |||||||||||||| |||||||||||| |||||    
T  23426065 taagtgaaagaggtgaaatttatctaacggcgttgtttggatttgtcactcctctgttgtggaaaa-gggtaaaacgaatggtttatgcgaagaaaaaaa 23426163  T
Q  282 tgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaatta 347  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||    
T  23426164 tgattgttgtgattctttcaatgaaatagctttccaaattgactgattaagtgattatacaaatta 23426229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 183 - 353
Target Start/End: Complemental strand, 53011877 - 53011707
Alignment:
Q  183 taagtaaaagatgtgaaatttatctaacagtgtggtttgcatt-gtcactactctgttgtggaaaaagggtaaaacgaatgatttatgcgaagagaaaaa 281  Q
    ||||| ||||| |||||||||||||||| |||| ||||| ||| |||||| ||||||||||||||| |||||||| ||||| |||||||||||| |||||    
T  53011877 taagtgaaagaggtgaaatttatctaacggtgtcgtttggatttgtcactcctctgttgtggaaaa-gggtaaaatgaatggtttatgcgaagaaaaaaa 53011779  T
Q  282 tgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaattaagggtg 353  Q
    |||||||||||||||||| ||||||||||||||||||||||| | ||||||||||||||||||||| |||||    
T  53011778 tgattgttgtgattcttttaatgaaatagctttccaaattgactgattaagtgattatacaaattaggggtg 53011707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 183 - 353
Target Start/End: Complemental strand, 44478205 - 44478034
Alignment:
Q  183 taagtaaaagatgtgaaatttatctaacagtgtggtttgcatt-gtcactactctgttgtggaaaaagggtaaaacgaatgatttatgcgaagagaaaaa 281  Q
    ||||| ||||| |||||||||||||||| |||| ||||| ||| |||||| ||||||||||||||| |||||||||||||  |||||||||||| |||||    
T  44478205 taagtgaaagaggtgaaatttatctaacggtgtcgtttgaatttgtcactcctctgttgtggaaaa-gggtaaaacgaatagtttatgcgaagaaaaaaa 44478107  T
Q  282 -tgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaattaagggtg 353  Q
     |||||||||||||||||||||||||||||||||||||||||| | ||| ||||||||||||||||| |||||    
T  44478106 atgattgttgtgattctttcaatgaaatagctttccaaattgactgatttagtgattatacaaattatgggtg 44478034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 183 - 353
Target Start/End: Complemental strand, 19661544 - 19661374
Alignment:
Q  183 taagtaaaagatgtgaaatttatctaacagtgtggtttgcatt-gtcactactctgttgtggaaaaagggtaaaacgaatgatttatgcgaagagaaaaa 281  Q
    ||||| ||||| |||||||||||||||| |||| ||||| ||| |||||| || |||||||||||| |||||||||||||| ||||||| |||| |||||    
T  19661544 taagtgaaagaggtgaaatttatctaacggtgtcgtttggatttgtcactcctttgttgtggaaaa-gggtaaaacgaatggtttatgcaaagaaaaaaa 19661446  T
Q  282 tgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaattaagggtg 353  Q
     |||||||||| |||||||||||||||||||||||||||||| | ||||||||||||||||||||| |||||    
T  19661445 ggattgttgtgtttctttcaatgaaatagctttccaaattgactgattaagtgattatacaaattaggggtg 19661374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 183 - 353
Target Start/End: Original strand, 32130689 - 32130859
Alignment:
Q  183 taagtaaaagatgtgaaatttatctaacagtgtggtttgcatt-gtcactactctgttgtggaaaaagggtaaaacgaatgatttatgcgaagagaaaaa 281  Q
    ||||| |||||  ||||||||||||||  |||| ||||| ||| |||||| ||||||||||||||| |||||||||||||| |||||||||||| |||||    
T  32130689 taagtgaaagagatgaaatttatctaattgtgtcgtttgaatttgtcactcctctgttgtggaaaa-gggtaaaacgaatggtttatgcgaagaaaaaaa 32130787  T
Q  282 tgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaattaagggtg 353  Q
    ||||||||||||||||||||||||||||| ||| |||||||| | ||||||||||||||||||||| |||||    
T  32130788 tgattgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattatacaaattaggggtg 32130859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 183 - 353
Target Start/End: Original strand, 11681641 - 11681811
Alignment:
Q  183 taagtaaaagatgtgaaatttatctaacagtgtggtttgcatt-gtcactactctgttgtggaaaaagggtaaaacgaatgatttatgcgaagagaaaaa 281  Q
    ||||| ||||| |||||||||||||||| |||| ||||| ||| ||||||  |||||||||||||| |||||||||| ||| ||||| |||||| |||||    
T  11681641 taagtgaaagaggtgaaatttatctaacggtgttgtttggatttgtcactcatctgttgtggaaaa-gggtaaaacggatggtttattcgaagaaaaaaa 11681739  T
Q  282 tgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaattaagggtg 353  Q
    |||||||||||||||||||||||||||| ||||||||||||| | |||||||||||||| |||||| |||||    
T  11681740 tgattgttgtgattctttcaatgaaataactttccaaattgactgattaagtgattataaaaattaggggtg 11681811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 183 - 353
Target Start/End: Original strand, 11689920 - 11690090
Alignment:
Q  183 taagtaaaagatgtgaaatttatctaacagtgtggtttgcatt-gtcactactctgttgtggaaaaagggtaaaacgaatgatttatgcgaagagaaaaa 281  Q
    ||||| ||||| |||||||||||||||| |||| ||||| ||| ||||||  |||||||||||||| |||||||||| ||| ||||| |||||| |||||    
T  11689920 taagtgaaagaggtgaaatttatctaacggtgttgtttggatttgtcactcatctgttgtggaaaa-gggtaaaacggatggtttattcgaagaaaaaaa 11690018  T
Q  282 tgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaattaagggtg 353  Q
    |||||||||||||||||||||||||||| ||||||||||||| | |||||||||||||| |||||| |||||    
T  11690019 tgattgttgtgattctttcaatgaaataactttccaaattgactgattaagtgattataaaaattaggggtg 11690090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 183 - 353
Target Start/End: Original strand, 28463487 - 28463657
Alignment:
Q  183 taagtaaaagatgtgaaatttatctaacagtgtggtttgcatt-gtcactactctgttgtggaaaaagggtaaaacgaatgatttatgcgaagagaaaaa 281  Q
    ||||| ||||| |||||||||||||||| |||| ||||| ||| |||||| |||| |||||||||| ||| |||||||||| |||||||||||| |||||    
T  28463487 taagtgaaagaggtgaaatttatctaacggtgtcgtttgaatttgtcactcctctattgtggaaaa-gggcaaaacgaatggtttatgcgaagaaaaaaa 28463585  T
Q  282 tgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaattaagggtg 353  Q
    |||||||||||||| |||||||||||||||||| ||| |||| | ||||||||||||||||||||| |||||    
T  28463586 tgattgttgtgattttttcaatgaaatagcttttcaacttgattgattaagtgattatacaaattaggggtg 28463657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 183 - 353
Target Start/End: Complemental strand, 23256758 - 23256589
Alignment:
Q  183 taagtaaaagatgtgaaatttatctaacagtgtggtttgcatt-gtcactactctgttgtggaaaaagggtaaaacgaatgatttatgcgaagagaaaaa 281  Q
    ||||||||| | |||||||||||||| | |||| ||||| ||| |||||| ||||||||||||||| |||||||||||||| |||||| ||||| |||||    
T  23256758 taagtaaaataggtgaaatttatctaccggtgtcgtttgaatttgtcactcctctgttgtggaaaa-gggtaaaacgaatggtttatgggaaga-aaaaa 23256661  T
Q  282 tgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaattaagggtg 353  Q
    |||||||||||||||||||| ||||||||||||| ||||||| | |||||||| |||||||||||| |||||    
T  23256660 tgattgttgtgattctttcattgaaatagctttctaaattgactgattaagtggttatacaaattaggggtg 23256589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 183 - 349
Target Start/End: Original strand, 29221520 - 29221686
Alignment:
Q  183 taagtaaaagatgtgaaatttatctaacagtgtggtttgcatt-gtcactactctgttgtggaaaaagggtaaaacgaatgatttatgcgaagagaaaaa 281  Q
    ||||| ||||| |||||||| ||| ||| |||| ||||  ||| |||||| ||||||||||||||| |||||||||||||| |||||||||||| |||||    
T  29221520 taagtgaaagaggtgaaattaatccaacggtgtcgtttaaatttgtcactcctctgttgtggaaaa-gggtaaaacgaatggtttatgcgaagaaaaaaa 29221618  T
Q  282 tgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaattaag 349  Q
    ||||||||||||||| |||||||||||||  |||||||||||    ||||||||||||||||||||||    
T  29221619 tgattgttgtgattccttcaatgaaatagacttccaaattgaccgtttaagtgattatacaaattaag 29221686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 183 - 353
Target Start/End: Complemental strand, 29580045 - 29579875
Alignment:
Q  183 taagtaaaagatgtgaaatttatctaacagtgtggtttgcatt-gtcactactctgttgtggaaaaagggtaaaacgaatgatttatgcgaagagaaaaa 281  Q
    ||||| ||||| |||||||||||||||| || |  |||| ||| |||||||||||||||||||||| || ||||||||||  |||||||||||| |||||    
T  29580045 taagtgaaagaggtgaaatttatctaacggtatcatttggatttgtcactactctgttgtggaaaatgg-taaaacgaattgtttatgcgaagaaaaaaa 29579947  T
Q  282 tgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaattaagggtg 353  Q
    |||||||||||||||||||| |||||||||||| ||| |||| | ||||| | ||||||||||||| |||||    
T  29579946 tgattgttgtgattctttcattgaaatagcttttcaatttgactgattaattaattatacaaattatgggtg 29579875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 183 - 346
Target Start/End: Complemental strand, 5545493 - 5545331
Alignment:
Q  183 taagtaaaagatgtgaaatttatctaacagtgtggtttgcatt-gtcactactctgttgtggaaaaagggtaaaacgaatgatttatgcgaagagaaaaa 281  Q
    ||||| ||||| |||||||||| ||||| |||| ||||| ||| |||||| ||| |||||| | || ||| |||||||||| |||||||||| | | |||    
T  5545493 taagtgaaagacgtgaaatttacctaacggtgtcgtttgaatttgtcactcctccgttgtg-agaagggggaaaacgaatggtttatgcgaaaa-ataaa 5545396  T
Q  282 tgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaatt 346  Q
    |||||||||||||||||| |||||||||||||||||||||||   ||||||||||||||||||||    
T  5545395 tgattgttgtgattcttttaatgaaatagctttccaaattgaccgattaagtgattatacaaatt 5545331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 183 - 347
Target Start/End: Complemental strand, 16072763 - 16072595
Alignment:
Q  183 taagtaaaagatgtgaaatttatctaacagtgtggtttgcatt-gtcactactctgttgtggaaaaagggtaaaacgaatgatttatgcgaagagaaaaa 281  Q
    ||||| ||||| ||||||||||||||||  |||  ||||  || |||||| ||||||||||||||| ||||||||| |||  |||||||||||| |||||    
T  16072763 taagtgaaagaggtgaaatttatctaacgatgtcatttgggtttgtcactcctctgttgtggaaaa-gggtaaaacaaatagtttatgcgaagaaaaaaa 16072665  T
Q  282 tgattgttgtgattc----tttcaatgaaatagctttccaaattgagtaattaagtgattatacaaatta 347  Q
    |||||||||||||||    ||||| |||||||| ||| |||||||| | ||||| |||||||||||||||    
T  16072664 tgattgttgtgattctttctttcattgaaatagtttttcaaattgactgattaaatgattatacaaatta 16072595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 246 - 346
Target Start/End: Original strand, 35653943 - 35654042
Alignment:
Q  246 aaagggtaaaacgaatgatttatgcgaagagaaaaatgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaat 345  Q
    |||||| |||||||||  |||||||||| | | |||| ||||||||||||||||||||||||||||||| |||||||| | |||||||||||||||||||    
T  35653943 aaagggaaaaacgaatagtttatgcgaaaa-agaaataattgttgtgattctttcaatgaaatagcttttcaaattgattgattaagtgattatacaaat 35654041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 246 - 353
Target Start/End: Original strand, 10575486 - 10575592
Alignment:
Q  246 aaagggtaaaacgaatgatttatgcgaagagaaaaatgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaat 345  Q
    |||||| |||||||||| |||||||||| | | ||||||||||||||||| ||||||||||||| ||||| ||||||| | ||||||||||||||||| |    
T  10575486 aaaggggaaaacgaatggtttatgcgaaaa-agaaatgattgttgtgattatttcaatgaaataactttctaaattgactgattaagtgattatacaagt 10575584  T
Q  346 taagggtg 353  Q
    | ||||||    
T  10575585 tgagggtg 10575592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 195 - 342
Target Start/End: Original strand, 21791461 - 21791605
Alignment:
Q  195 gtgaaatttatctaacagtgtggtttgcattgtcactactctgttgtggaaaaagggtaaaacgaatgatttatgcgaagagaaaaatgattgttgtgat 294  Q
    |||||||||| |||||| ||| ||||| |||||||||  |  || |||| ||| |||  |||| |||| |||||||||| | | ||||||||||||||||    
T  21791461 gtgaaatttacctaacaatgtcgtttggattgtcactcattcgtcgtgggaaagggg--aaacaaatggtttatgcgaaaa-agaaatgattgttgtgat 21791557  T
Q  295 tctttcaatgaaatagctttccaaattgagtaattaagtgattataca 342  Q
    ||||||||||||||| |||| |||||||| | ||||||||||||||||    
T  21791558 tctttcaatgaaataacttttcaaattgactgattaagtgattataca 21791605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 279 - 347
Target Start/End: Original strand, 45172640 - 45172708
Alignment:
Q  279 aaatgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaatta 347  Q
    |||||||||||||||||||||| ||||||||||||| |||||||| | |||||||||||||||||||||    
T  45172640 aaatgattgttgtgattctttccatgaaatagcttttcaaattgactgattaagtgattatacaaatta 45172708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 253 - 346
Target Start/End: Original strand, 43154758 - 43154850
Alignment:
Q  253 aaaacgaatgatttatgcgaagagaaaaatgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaatt 346  Q
    ||||||||||||||||||||| | | |||| |||||||||||||||| ||||||||| ||||  ||||||| | ||||||||||||||||||||    
T  43154758 aaaacgaatgatttatgcgaaaa-ataaataattgttgtgattcttttaatgaaataactttttaaattgactgattaagtgattatacaaatt 43154850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 253 - 346
Target Start/End: Complemental strand, 55134303 - 55134210
Alignment:
Q  253 aaaacgaatgatttatgcgaagagaaaaatgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaatt 346  Q
    |||||||||||||||||  || | | |||||||||||||||||||||| ||||||||||||| |||||||| | ||||||| ||||||| ||||    
T  55134303 aaaacgaatgatttatgtaaaaaaagaaatgattgttgtgattctttctatgaaatagcttttcaaattgactgattaagtcattataccaatt 55134210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 195 - 346
Target Start/End: Complemental strand, 22423837 - 22423686
Alignment:
Q  195 gtgaaatttatctaacagtgtggtttgcattgtcactactctgttgtggaaaaagggtaaaacgaatgatttatgcgaagagaa-aaatgattgttgtga 293  Q
    |||||||||||||||| |||| ||||| | ||||||| || ||| ||   ||| ||  ||||||||||||||||| | | | || |||| |||||| |||    
T  22423837 gtgaaatttatctaacggtgtcgtttggaatgtcactcctatgtcgtatgaaatgga-aaaacgaatgatttatgtggaaaaaataaataattgttttga 22423739  T
Q  294 ttctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaatt 346  Q
    |||||||||| |||||| ||| |||||||| | |||||||||| |||||||||    
T  22423738 ttctttcaataaaatagtttttcaaattgattgattaagtgatcatacaaatt 22423686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 246 - 346
Target Start/End: Complemental strand, 34982325 - 34982226
Alignment:
Q  246 aaagggtaaaacgaatgatttatgcgaagagaaaaatgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaat 345  Q
    |||||| ||||| ||||||||||  ||| | | |||| ||||||||||||||||||| ||||||| ||| | |||||| | |||||||||||||||||||    
T  34982325 aaaggggaaaacaaatgatttatatgaaaa-agaaataattgttgtgattctttcaacgaaatagtttttccaattgactgattaagtgattatacaaat 34982227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 183 - 309
Target Start/End: Original strand, 51066324 - 51066449
Alignment:
Q  183 taagtaaaagatgtgaaatttatctaacagtgtggtttgcatt-gtcactactctgttgtggaaaaagggtaaaacgaatgatttatgcg-aagagaaaa 280  Q
    ||||| ||||| |||||||||| ||||||||||  |||| ||| |||||| ||  ||| ||| ||   || ||||| |||| |||||||| || | ||||    
T  51066324 taagtgaaagaggtgaaatttacctaacagtgtcatttggatttgtcactccttcgttttgggaa---gggaaaacaaatggtttatgcggaaaaaaaaa 51066420  T
Q  281 atgattgttgtgattctttcaatgaaata 309  Q
    |||||||||||||||||||||||||||||    
T  51066421 atgattgttgtgattctttcaatgaaata 51066449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 279 - 346
Target Start/End: Complemental strand, 24449195 - 24449128
Alignment:
Q  279 aaatgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaatt 346  Q
    |||| ||||||||| ||||||| | ||||||| ||| ||||||||   ||||||||||||||||||||    
T  24449195 aaataattgttgtggttctttctaagaaatagtttttcaaattgaccgattaagtgattatacaaatt 24449128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 247
Target Start/End: Original strand, 16887882 - 16887947
Alignment:
Q  183 taagtaaaagatgtgaaatttatctaacagtgtggtttgca-ttgtcactactctgttgtggaaaa 247  Q
    ||||| ||||| |||||||||||||||| |||| ||||| | ||||||||  ||||||||||||||    
T  16887882 taagtgaaagaggtgaaatttatctaacggtgtcgtttggatttgtcactcatctgttgtggaaaa 16887947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 287 - 323
Target Start/End: Original strand, 51066667 - 51066703
Alignment:
Q  287 gttgtgattctttcaatgaaatagctttccaaattga 323  Q
    |||||||||||||||||||||| |||||| |||||||    
T  51066667 gttgtgattctttcaatgaaattgctttctaaattga 51066703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 108; Significance: 4e-54; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 183 - 353
Target Start/End: Original strand, 26151646 - 26151816
Alignment:
Q  183 taagtaaaagatgtgaaatttatctaacagtgtggtttgcatt-gtcactactctgttgtggaaaaagggtaaaacgaatgatttatgcgaagagaaaaa 281  Q
    ||||| ||||| |||||||||||||||| |||| ||||| ||| |||||| ||||||||| ||||| |||||||||||||| |||||||||||| |||||    
T  26151646 taagtgaaagaggtgaaatttatctaacggtgtcgtttggatttgtcactcctctgttgtagaaaa-gggtaaaacgaatggtttatgcgaagaaaaaaa 26151744  T
Q  282 tgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaattaagggtg 353  Q
    |||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||| |||||    
T  26151745 tgattgttgtgattctttcaatgaaatagctttccaaattgactgattaagtgattatacaaattaggggtg 26151816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 183 - 347
Target Start/End: Complemental strand, 25222488 - 25222324
Alignment:
Q  183 taagtaaaagatgtgaaatttatctaacagtgtggtttgcatt-gtcactactctgttgtggaaaaagggtaaaacgaatgatttatgcgaagagaaaaa 281  Q
    ||||| ||||||||||||||||| |||| |||| ||||| ||| |||||| |||||||||| ||||||||||||||||||| |||||||||||| |||||    
T  25222488 taagtgaaagatgtgaaatttatataacggtgttgtttgaatttgtcactcctctgttgtg-aaaaagggtaaaacgaatggtttatgcgaagaaaaaaa 25222390  T
Q  282 tgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaatta 347  Q
    |||||||||||||||||||||||||||| ||||| ||||||| |||||||||||||||||||||||    
T  25222389 tgattgttgtgattctttcaatgaaataactttctaaattgactaattaagtgattatacaaatta 25222324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 183 - 353
Target Start/End: Complemental strand, 4856158 - 4855988
Alignment:
Q  183 taagtaaaagatgtgaaatttatctaacagtgtggtttgcatt-gtcactactctgttgtggaaaaagggtaaaacgaatgatttatgcgaagagaaaaa 281  Q
    ||||| ||||| ||||||||||||||||| ||| ||||| ||| |||||| ||||||||||||||| || ||||||||||| |||||||||||| |||||    
T  4856158 taagtgaaagaggtgaaatttatctaacaatgtcgtttggatttgtcactcctctgttgtggaaaa-ggttaaaacgaatggtttatgcgaagaaaaaaa 4856060  T
Q  282 tgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaattaagggtg 353  Q
    |||||||||||||||||||||||||||||||||||||||| | | ||||||||||||||||||||| |||||    
T  4856059 tgattgttgtgattctttcaatgaaatagctttccaaattcactgattaagtgattatacaaattaggggtg 4855988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 183 - 353
Target Start/End: Original strand, 19367318 - 19367488
Alignment:
Q  183 taagtaaaagatgtgaaatttatctaacagtgtggtttgcatt-gtcactactctgttgtggaaaaagggtaaaacgaatgatttatgcgaagagaaaaa 281  Q
    ||||| ||||| |||||||||||||||| |||| ||||| ||| |||||| | ||||||||||||| |||||||||||||| ||||| |||||| |||||    
T  19367318 taagtgaaagaggtgaaatttatctaacggtgtcgtttgaatttgtcactccactgttgtggaaaa-gggtaaaacgaatggtttattcgaagaaaaaaa 19367416  T
Q  282 tgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaattaagggtg 353  Q
    ||||||||||||||||||||||||||||||||| |||||||| | ||||||||||||||||||||| |||||    
T  19367417 tgattgttgtgattctttcaatgaaatagcttttcaaattgactgattaagtgattatacaaattaggggtg 19367488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 183 - 353
Target Start/End: Original strand, 42411457 - 42411627
Alignment:
Q  183 taagtaaaagatgtgaaatttatctaacagtgtggtttgcattgt-cactactctgttgtggaaaaagggtaaaacgaatgatttatgcgaagagaaaaa 281  Q
    ||||| ||||| || ||||||||||||| |||| ||||| ||| | |||| |||||||||| ||||||||||||||||||| |||||||||||  |||||    
T  42411457 taagtgaaagaggttaaatttatctaacggtgtcgtttggatttttcactcctctgttgtg-aaaaagggtaaaacgaatggtttatgcgaagtaaaaaa 42411555  T
Q  282 tgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaattaagggtg 353  Q
    |||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| |||||    
T  42411556 tgattgttgtgattctttaaatgaaatagctttccaaattgactaattaagtgattatacaaattaggggtg 42411627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 183 - 353
Target Start/End: Complemental strand, 45619141 - 45618972
Alignment:
Q  183 taagtaaaagatgtgaaatttatctaacagtgtggtttgcatt-gtcactactctgttgtggaaaaagggtaaaacgaatgatttatgcgaagagaaaaa 281  Q
    ||||| ||||| |||||||||||||||| |||| ||||| ||| |||||| ||||||||||||||| ||||||||| |||| |||||||||||| |||||    
T  45619141 taagtgaaagaggtgaaatttatctaacggtgtcgtttggatttgtcactcctctgttgtggaaaa-gggtaaaacaaatggtttatgcgaagaaaaaaa 45619043  T
Q  282 tgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaattaagggtg 353  Q
    |||||||||||||||||||||||||||||| ||||||||||| | ||||||||||||||||||||| |||||    
T  45619042 tgattgttgtgattctttcaatgaaatagc-ttccaaattgactgattaagtgattatacaaattaggggtg 45618972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 183 - 355
Target Start/End: Original strand, 41096436 - 41096609
Alignment:
Q  183 taagtaaaagatgtgaaatttatctaacagtgtggtttgcatt-gtcactactctgttgtggaaaaagggtaaaacgaatgatttatgcgaagagaaaa- 280  Q
    ||||| ||||| |||||||||||||||| |||| ||||| ||| |||||| ||||||||||||||| |||||||||||||| || ||||||||| ||||     
T  41096436 taagtgaaagaggtgaaatttatctaacggtgtcgtttggatttgtcactcctctgttgtggaaaa-gggtaaaacgaatggttaatgcgaagaaaaaaa 41096534  T
Q  281 atgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaattaagggtgat 355  Q
    |||||||||||||||||||||||||||||| |||||||||||| | ||||||||||||||||||||| |||||||    
T  41096535 atgattgttgtgattctttcaatgaaatagttttccaaattgactgattaagtgattatacaaattaggggtgat 41096609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 183 - 353
Target Start/End: Complemental strand, 7993798 - 7993627
Alignment:
Q  183 taagtaaaagatgtgaaatttatctaacagtgtggtttgcatt-gtcactactctgttgtggaaaaagggtaaaacgaatgatttatgcgaagagaaaaa 281  Q
    ||||| |||||||||||||||||||||| |||| ||||| ||| |||||| |||| |||||||||| |||||||||||||| |||||||||||| |||||    
T  7993798 taagtgaaagatgtgaaatttatctaacggtgtcgtttggatttgtcactcctctattgtggaaaa-gggtaaaacgaatggtttatgcgaagaaaaaaa 7993700  T
Q  282 t-gattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaattaagggtg 353  Q
      ||||||||||||||||||||||||||||||||||||||||  | ||||||||||||||||||||| |||||    
T  7993699 aagattgttgtgattctttcaatgaaatagctttccaaattggctgattaagtgattatacaaattaggggtg 7993627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 183 - 353
Target Start/End: Complemental strand, 2063970 - 2063800
Alignment:
Q  183 taagtaaaagatgtgaaatttatctaacagtgtggtttgcatt-gtcactactctgttgtggaaaaagggtaaaacgaatgatttatgcgaagagaaaaa 281  Q
    ||||| ||||| |||||||||||||||| |||| ||||| ||| |||||| |||||||||||||||||| ||||||||||| ||| ||||   | |||||    
T  2063970 taagtgaaagaggtgaaatttatctaacggtgtcgtttgaatttgtcactcctctgttgtggaaaaagg-taaaacgaatggtttttgcgggaaaaaaaa 2063872  T
Q  282 tgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaattaagggtg 353  Q
    |||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||| |||||    
T  2063871 tgattgttgtgattctttcaatgaaatagctttccaaattgactgattaagtgattatacaaattaggggtg 2063800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 183 - 353
Target Start/End: Complemental strand, 13020588 - 13020418
Alignment:
Q  183 taagtaaaagatgtgaaatttatctaacagtgtggtttgcattgt-cactactctgttgtggaaaaagggtaaaacgaatgatttatgcgaagagaaaaa 281  Q
    ||||| ||||| |||||||||||||||| ||||  |||| ||| | |||| |||||||||| ||||||| ||||||||||| |||||||||||| |||||    
T  13020588 taagtgaaagaggtgaaatttatctaacggtgtcatttgaatttttcactcctctgttgtgaaaaaagg-taaaacgaatggtttatgcgaagaaaaaaa 13020490  T
Q  282 tgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaattaagggtg 353  Q
    | |||||||||||||||| ||||||||||||||||||||||| | ||||||||||||||||||||| |||||    
T  13020489 ttattgttgtgattctttaaatgaaatagctttccaaattgactgattaagtgattatacaaattaggggtg 13020418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 183 - 353
Target Start/End: Complemental strand, 6530824 - 6530654
Alignment:
Q  183 taagtaaaagatgtgaaatttatctaacagtgtggtttgcat-tgtcactactctgttgtggaaaaagggtaaaacgaatgatttatgcgaagagaaaaa 281  Q
    ||||| |||||  |||||||||||||||||||  ||||| || ||||||| ||||||||||||| | || ||||||||||| |||||||||||| || ||    
T  6530824 taagtgaaagagatgaaatttatctaacagtgacgtttgaatctgtcactcctctgttgtggaata-ggataaaacgaatggtttatgcgaagaaaataa 6530726  T
Q  282 tgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaattaagggtg 353  Q
    |||||||||||||||||||||||||||| |||| |||||||| | ||||||||||||||||||||| |||||    
T  6530725 tgattgttgtgattctttcaatgaaataccttttcaaattgactgattaagtgattatacaaattaggggtg 6530654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 183 - 352
Target Start/End: Original strand, 18676209 - 18676379
Alignment:
Q  183 taagtaaaagatgtgaaatttatctaacagtgtggtttgcatt-gtcactactctgttgtggaaaaagggtaaaacgaatgatttatgcgaagagaaaa- 280  Q
    ||||| ||||| ||||| |||||||||| |||| ||||| ||| |||||| |||| |||||||||| |||||||||||||| ||||||| |||| ||||     
T  18676209 taagtgaaagaggtgaactttatctaacggtgtcgtttgaatttgtcactcctcttttgtggaaaa-gggtaaaacgaatggtttatgcaaagaaaaaaa 18676307  T
Q  281 atgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaattaagggt 352  Q
    ||||||||||||||||||||||||||||||||||||||||||| | ||||||| ||||||||||||| ||||    
T  18676308 atgattgttgtgattctttcaatgaaatagctttccaaattgactgattaagttattatacaaattaggggt 18676379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 183 - 317
Target Start/End: Complemental strand, 36481559 - 36481425
Alignment:
Q  183 taagtaaaagatgtgaaatttatctaacagtgtggtttgcatt-gtcactactctgttgtggaaaaagggtaaaacgaatgatttatgcgaagagaaaaa 281  Q
    ||||| ||||| |||||||||||||| | |||| ||||| ||| |||||| ||||||||||||||| |||||||| ||||| |||||||||||| |||||    
T  36481559 taagtgaaagaggtgaaatttatctaccggtgtcgtttggatttgtcactcctctgttgtggaaaa-gggtaaaatgaatggtttatgcgaagaaaaaaa 36481461  T
Q  282 tgattgttgtgattctttcaatgaaatagctttcca 317  Q
    ||||||||||||||||||||||||||||||||||||    
T  36481460 tgattgttgtgattctttcaatgaaatagctttcca 36481425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 245 - 353
Target Start/End: Original strand, 34061817 - 34061925
Alignment:
Q  245 aaaagggtaaaacgaatgatttatgcgaagagaaaaatgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaa 344  Q
    |||||||||||||| ||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| || |||||||    
T  34061817 aaaagggtaaaacggatggtttatgcgaagaaaaaaatgattgttgtgattctttcaatgaaatagctttccaaattgactgattaagtaatcatacaaa 34061916  T
Q  345 ttaagggtg 353  Q
    ||| |||||    
T  34061917 ttatgggtg 34061925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 195 - 353
Target Start/End: Complemental strand, 45042543 - 45042384
Alignment:
Q  195 gtgaaatttatctaacagtgtggtttgcatt-gtcactactctgttgtggaaaaagggtaaaacgaatgatttatgcgaagagaaaaatgattgttgtga 293  Q
    |||||||||||| |||| ||| ||||| ||| |||||| ||||||||||||||| ||||||  |||||| |||||||||||| |||||||||||||||||    
T  45042543 gtgaaatttatccaacaatgtcgtttgaatttgtcactcctctgttgtggaaaa-gggtaa--cgaatggtttatgcgaagaaaaaaatgattgttgtga 45042447  T
Q  294 ttctttcaatgaaatag-cttt--ccaaattgagtaattaagtgattatacaaattaagggtg 353  Q
    ||||||||||||||||| ||||  ||||||||| | ||||||||||||||||||||| |||||    
T  45042446 ttctttcaatgaaatagactttcaccaaattgactgattaagtgattatacaaattaggggtg 45042384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 199 - 323
Target Start/End: Original strand, 42759671 - 42759795
Alignment:
Q  199 aatttatctaacagtgtggtttgcatt-gtcactactctgttgtggaaaaagggtaaaacgaatgatttatgcgaagagaaaaatgattgttgtgattct 297  Q
    |||||||||||| |||| ||||| ||| |||||  |||| |||||||||| |||||||||||||| |||||||||||| |||||||||||||||||||||    
T  42759671 aatttatctaacggtgtcgtttgaatttgtcacccctctattgtggaaaa-gggtaaaacgaatggtttatgcgaagaaaaaaatgattgttgtgattct 42759769  T
Q  298 ttcaatgaaatagctttccaaattga 323  Q
    |||||||||||| |||||||||||||    
T  42759770 ttcaatgaaataactttccaaattga 42759795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 183 - 353
Target Start/End: Complemental strand, 12269589 - 12269420
Alignment:
Q  183 taagtaaaagatgtgaaatttatctaacagtgtggtttgcatt-gtcactactctgttgtggaaaaagggtaaaacgaatgatttatgcgaagagaaaaa 281  Q
    ||||| ||||| |||||||||||||||| |||| ||||| ||| |||| | ||||| |||||||||||  ||||||||||| |||||| ||||| |||||    
T  12269589 taagtgaaagaggtgaaatttatctaacggtgtcgtttgaatttgtcattcctctgctgtggaaaaaga-taaaacgaatggtttatgtgaagaaaaaaa 12269491  T
Q  282 tgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaattaagggtg 353  Q
    ||||||| |||||| ||| ||||||||||||||||||| | | | ||||||||||||||||||||| |||||    
T  12269490 tgattgtggtgatttttttaatgaaatagctttccaaa-tcactgattaagtgattatacaaattaggggtg 12269420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 246 - 353
Target Start/End: Original strand, 18172903 - 18173009
Alignment:
Q  246 aaagggtaaaacgaatgatttatgcgaagagaaaaatgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaat 345  Q
    |||||| |||||||||| |||||| ||| | | |||||||||||||||||||||| ||||||||||||| |||||||||| |||||||||||||||||||    
T  18172903 aaaggggaaaacgaatggtttatgtgaaaa-agaaatgattgttgtgattctttcgatgaaatagcttttcaaattgagtgattaagtgattatacaaat 18173001  T
Q  346 taagggtg 353  Q
    || |||||    
T  18173002 taggggtg 18173009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 246 - 346
Target Start/End: Complemental strand, 15457602 - 15457502
Alignment:
Q  246 aaagggtaaaacgaatgatttatgcgaagagaaaaatgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaat 345  Q
    |||||| |||||||||| ||| || ||| | |||||| |||||||||||||||||||| |||||||||| |||||||| | |||||||||||||||||||    
T  15457602 aaaggggaaaacgaatggtttgtgtgaaaaaaaaaattattgttgtgattctttcaataaaatagcttttcaaattgactgattaagtgattatacaaat 15457503  T
Q  346 t 346  Q
    |    
T  15457502 t 15457502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 224 - 346
Target Start/End: Original strand, 38985651 - 38985771
Alignment:
Q  224 ttgtcactactctgttgtggaaaaagggtaaaacgaatgatttatgcgaagagaaaaatgattgttgtgattctttcaatgaaatagctttccaaattga 323  Q
    ||||||||  || ||||||||||| ||| ||||| |||| |||||| ||| | | |||||||||||||||||||||||||||||||||||| ||||||||    
T  38985651 ttgtcacttatccgttgtggaaaagggg-aaaacaaatgttttatgtgaaaa-agaaatgattgttgtgattctttcaatgaaatagcttttcaaattga 38985748  T
Q  324 gtaattaagtgattatacaaatt 346  Q
     | ||||| ||||||||||||||    
T  38985749 ttgattaaatgattatacaaatt 38985771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 279 - 346
Target Start/End: Complemental strand, 1418978 - 1418911
Alignment:
Q  279 aaatgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaatt 346  Q
    |||| ||||||||||||||||||||||||||||||| |||||||| | ||||||||||||||||||||    
T  1418978 aaataattgttgtgattctttcaatgaaatagctttacaaattgactgattaagtgattatacaaatt 1418911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 253 - 355
Target Start/End: Original strand, 27302498 - 27302599
Alignment:
Q  253 aaaacgaatgatttatgcgaagagaaaaatgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaattaagggt 352  Q
    |||| ||||| |||||||||| | | ||||||||||||||||||||| ||||| |||||||| ||||||||   |||||||||||||||||||| |||||    
T  27302498 aaaatgaatggtttatgcgaaaa-ataaatgattgttgtgattcttttaatgatatagcttttcaaattgaccgattaagtgattatacaaattgagggt 27302596  T
Q  353 gat 355  Q
    |||    
T  27302597 gat 27302599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 253 - 346
Target Start/End: Complemental strand, 13997408 - 13997316
Alignment:
Q  253 aaaacgaatgatttatgcgaagagaaaaatgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaatt 346  Q
    |||||||||| |||||||||| | | |||| ||||||||||||||||||||||||||| ||| |||||||| | ||||||||||||| ||||||    
T  13997408 aaaacgaatggtttatgcgaaaa-agaaataattgttgtgattctttcaatgaaatagtttttcaaattgactcattaagtgattattcaaatt 13997316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 279 - 346
Target Start/End: Original strand, 18916049 - 18916116
Alignment:
Q  279 aaatgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaatt 346  Q
    ||||||||| ||||||||||||| |||||||||||| |||||||| | ||||||||||||||||||||    
T  18916049 aaatgattgctgtgattctttcagtgaaatagcttttcaaattgattgattaagtgattatacaaatt 18916116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 279 - 346
Target Start/End: Complemental strand, 39081467 - 39081400
Alignment:
Q  279 aaatgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaatt 346  Q
    |||| |||||||| |||||||||||||||||||||| |||||||| | ||||||||||||||||||||    
T  39081467 aaataattgttgtaattctttcaatgaaatagcttttcaaattgactgattaagtgattatacaaatt 39081400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 240 - 346
Target Start/End: Original strand, 36059863 - 36059967
Alignment:
Q  240 gtggaaaaagggtaaaacgaatgatttatgcgaagagaaaaatgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattat 339  Q
    |||| ||||||| |||||||||| ||||||| || | | |||||||||||||| |||||||||||||||||||||  ||||| | | |||||||||||||    
T  36059863 gtgggaaaaggg-aaaacgaatggtttatgcaaaaa-agaaatgattgttgtggttctttcaatgaaatagctttttaaattaactgattaagtgattat 36059960  T
Q  340 acaaatt 346  Q
    |||||||    
T  36059961 acaaatt 36059967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 246 - 346
Target Start/End: Complemental strand, 38599502 - 38599404
Alignment:
Q  246 aaagggtaaaacgaatgatttatgcgaagagaaaaatgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaat 345  Q
    |||||| |||||||||| ||||||  || | | |||| |||||| |||||||||||||||||||| ||| |||||||| | |||||||||||||||||||    
T  38599502 aaaggggaaaacgaatggtttatg--aaaaaataaataattgttttgattctttcaatgaaatagtttttcaaattgattgattaagtgattatacaaat 38599405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 195 - 346
Target Start/End: Original strand, 31273078 - 31273228
Alignment:
Q  195 gtgaaatttatctaacagtgtggtttgcatt-gtcactactctgttgtggaaaaagggtaaaacgaatgatttatgcgaagagaaaaatgattgttgtga 293  Q
    |||||||||| ||||| |||| ||||| ||| ||||||  |||||||||| ||| | | ||||| |||| |||||||||| | | |||||| |||| |||    
T  31273078 gtgaaatttacctaactgtgtcgtttggatttgtcacttttctgttgtgggaaa-gagaaaaacaaatggtttatgcgaaaa-agaaatgaatgttatga 31273175  T
Q  294 ttctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaatt 346  Q
    |||||| ||||||||||  ||||||||||| | ||||| ||||||||||||||    
T  31273176 ttcttttaatgaaatagtattccaaattgactgattaaatgattatacaaatt 31273228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 246 - 323
Target Start/End: Original strand, 17117608 - 17117684
Alignment:
Q  246 aaagggtaaaacgaatgatttatgcgaagagaaaaatgattgttgtgattctttcaatgaaatagctttccaaattga 323  Q
    |||||| |||||||||| |||||  ||| | | |||||||||||||||||||||||||||||||||||| ||||||||    
T  17117608 aaaggggaaaacgaatggtttatatgaaaa-agaaatgattgttgtgattctttcaatgaaatagcttttcaaattga 17117684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 246 - 346
Target Start/End: Original strand, 21747193 - 21747292
Alignment:
Q  246 aaagggtaaaacgaatgatttatgcgaagagaaaaatgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaat 345  Q
    |||||| |||||||||| |||||| ||| | | |||| |||||||||||||||||||||| ||||  ||  ||||||| | |||||||||||||||||||    
T  21747193 aaagggaaaaacgaatggtttatgtgaaaa-agaaattattgttgtgattctttcaatgacatagtattttaaattgactgattaagtgattatacaaat 21747291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 277 - 330
Target Start/End: Complemental strand, 13001708 - 13001655
Alignment:
Q  277 aaaaatgattgttgtgattctttcaatgaaatagctttccaaattgagtaatta 330  Q
    |||||||||| |||||||||||| ||||||||||||||  ||||||| ||||||    
T  13001708 aaaaatgattattgtgattcttttaatgaaatagctttataaattgactaatta 13001655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 346
Target Start/End: Original strand, 29480600 - 29480699
Alignment:
Q  246 aaagggtaaaacgaatgatttatgcgaagagaaaaatgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaat 345  Q
    |||||| || || |||| |||||||||| | | |||| ||||||||||||||||||||||||||  ||| |||||||| | | |||||| |||| |||||    
T  29480600 aaaggggaagacaaatggtttatgcgaaaa-agaaataattgttgtgattctttcaatgaaataatttttcaaattgactgaataagtgtttattcaaat 29480698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 253 - 353
Target Start/End: Original strand, 1226236 - 1226336
Alignment:
Q  253 aaaacgaatgatttatgcgaagagaaaaatgattgttgtgattc-tttcaatgaaatagctttccaaattgagtaattaagtgattatacaaattaaggg 351  Q
    ||||| |||| |||||||||| | | |||||||||||||||||| ||| | ||||||| |||| |||||||  | ||| |||||||||| ||||| ||||    
T  1226236 aaaacaaatggtttatgcgaaaa-agaaatgattgttgtgattctttttattgaaataacttttcaaattgtctgattgagtgattatataaattgaggg 1226334  T
Q  352 tg 353  Q
    ||    
T  1226335 tg 1226336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 277 - 330
Target Start/End: Complemental strand, 9029675 - 9029622
Alignment:
Q  277 aaaaatgattgttgtgattctttcaatgaaatagctttccaaattgagtaatta 330  Q
    |||||||||  |||||||||||| ||||||||| ||||| ||||||| ||||||    
T  9029675 aaaaatgatacttgtgattcttttaatgaaataactttctaaattgactaatta 9029622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 106; Significance: 6e-53; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 183 - 347
Target Start/End: Complemental strand, 12661474 - 12661310
Alignment:
Q  183 taagtaaaagatgtgaaatttatctaacagtgtggtttgcatt-gtcactactctgttgtggaaaaagggtaaaacgaatgatttatgcgaagagaaaaa 281  Q
    ||||| ||||||||||||||||||||||||||| ||||| ||| |||||| ||||||||||||||| |||||||||||||| |||||||||||| |||||    
T  12661474 taagtgaaagatgtgaaatttatctaacagtgtcgtttggatttgtcactcctctgttgtggaaaa-gggtaaaacgaatggtttatgcgaagaaaaaaa 12661376  T
Q  282 tgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaatta 347  Q
      |||||||||||||||||||||||||||||||||||||||| |  ||||||||||||||||||||    
T  12661375 atattgttgtgattctttcaatgaaatagctttccaaattgactggttaagtgattatacaaatta 12661310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 183 - 347
Target Start/End: Complemental strand, 13656375 - 13656211
Alignment:
Q  183 taagtaaaagatgtgaaatttatctaacagtgtggtttgcatt-gtcactactctgttgtggaaaaagggtaaaacgaatgatttatgcgaagagaaaaa 281  Q
    ||||||||||| |||||||||||||||| |||| ||||| ||| | |||| ||||||||| ||||| |||||||||||||| |||||||||||| |||||    
T  13656375 taagtaaaagaggtgaaatttatctaacggtgtcgtttgaatttgacactcctctgttgtagaaaa-gggtaaaacgaatggtttatgcgaagaaaaaaa 13656277  T
Q  282 tgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaatta 347  Q
    |||||||||||||||||||||||||||| |||| |||||||| | |||||||||||||||||||||    
T  13656276 tgattgttgtgattctttcaatgaaataacttttcaaattgactgattaagtgattatacaaatta 13656211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 183 - 353
Target Start/End: Complemental strand, 13474795 - 13474625
Alignment:
Q  183 taagtaaaagatgtgaaatttatctaacagtgtggtttgcatt-gtcactactctgttgtggaaaaagggtaaaacgaatgatttatgcgaagagaaaaa 281  Q
    ||||| ||||| || ||||||||||||| |||| ||||| ||| |||||| ||||||||||||||| |||||||||||||| |||||||||||| |||||    
T  13474795 taagtgaaagaggtaaaatttatctaacggtgtcgtttggatttgtcactcctctgttgtggaaaa-gggtaaaacgaatggtttatgcgaagaaaaaaa 13474697  T
Q  282 tgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaattaagggtg 353  Q
    |||||||||||||||||||||||||| | |||| |||||||| | ||||||||||||||||||||| |||||    
T  13474696 tgattgttgtgattctttcaatgaaacaacttttcaaattgactgattaagtgattatacaaattaggggtg 13474625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 183 - 347
Target Start/End: Complemental strand, 13424029 - 13423865
Alignment:
Q  183 taagtaaaagatgtgaaatttatctaacagtgtggtttgcatt-gtcactactctgttgtggaaaaagggtaaaacgaatgatttatgcgaagagaaaaa 281  Q
    ||||| ||||| |||||||||||| ||| |||| ||||  ||| |||||| |||| |||||||||| |||||||||||||| |||||||||||| |||||    
T  13424029 taagtgaaagaggtgaaatttatcgaacggtgtcgtttagatttgtcactcctctattgtggaaaa-gggtaaaacgaatggtttatgcgaagaaaaaaa 13423931  T
Q  282 tgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaatta 347  Q
    |||||||||||||||||||||||||||||||||| ||||||| | |||||||||||||||||||||    
T  13423930 tgattgttgtgattctttcaatgaaatagctttctaaattgattgattaagtgattatacaaatta 13423865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 183 - 347
Target Start/End: Original strand, 19099213 - 19099377
Alignment:
Q  183 taagtaaaagatgtgaaatttatctaacagtgtggtttgcatt-gtcactactctgttgtggaaaaagggtaaaacgaatgatttatgcgaagagaaaaa 281  Q
    ||||| ||||| |||||||||||||||| |||| ||||| ||| |||||| ||| ||||||||||  |  ||||||||||| |||||||||||| |||||    
T  19099213 taagtgaaagaggtgaaatttatctaacggtgtcgtttggatttgtcacttctcggttgtggaaagtga-taaaacgaatggtttatgcgaagaaaaaaa 19099311  T
Q  282 tgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaatta 347  Q
    |||||||||||||||||||||||||||||||||  ||||||| | |||||||||||||||||||||    
T  19099312 tgattgttgtgattctttcaatgaaatagctttttaaattgactgattaagtgattatacaaatta 19099377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 183 - 353
Target Start/End: Original strand, 26377672 - 26377843
Alignment:
Q  183 taagtaaaagatgtgaaatttatctaacagtgtggtttgcatt-gtcactactctgttgtggaaaaagggtaaaacgaatgatttatgcgaag-agaaaa 280  Q
    ||||| |||||  ||||||||||||||| |||| ||||| ||| |||||| ||| |||||| ||||||| ||||||||||| ||||||||||| | ||||    
T  26377672 taagtgaaagagatgaaatttatctaacggtgtcgtttggatttgtcactcctcagttgtgaaaaaagg-taaaacgaatggtttatgcgaaggaaaaaa 26377770  T
Q  281 atgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaattaagggtg 353  Q
    |||||||||||||||||||||||||||||||||  || ||||| | | ||||||||||||||||||| |||||    
T  26377771 atgattgttgtgattctttcaatgaaatagcttctcacattgactgaataagtgattatacaaattaggggtg 26377843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 183 - 305
Target Start/End: Complemental strand, 26312153 - 26312027
Alignment:
Q  183 taagtaaaagatgtgaaatttatctaacagtgtggtttgcatt-gtcactact---ctgttgtggaaaaagggtaaaacgaatgatttatgcgaagagaa 278  Q
    ||||| ||||| |||||||||||||||| |||| ||||| ||| |||||| ||   ||||||||||||| |||||||||||||| ||||| |||||| ||    
T  26312153 taagtgaaagaggtgaaatttatctaacggtgtcgtttggatttgtcactcctgatctgttgtggaaaaggggtaaaacgaatggtttatacgaagaaaa 26312054  T
Q  279 aaatgattgttgtgattctttcaatga 305  Q
    |||||||||||||||||||||||||||    
T  26312053 aaatgattgttgtgattctttcaatga 26312027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 246 - 346
Target Start/End: Complemental strand, 138245 - 138146
Alignment:
Q  246 aaagggtaaaacgaatgatttatgcgaagagaaaaatgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaat 345  Q
    |||||| |||||||||| |||||||| | | |||||| |||||||||||| |||||||||||||||||| |||||||| | |||||||||||||||||||    
T  138245 aaaggggaaaacgaatggtttatgcggaaa-aaaaataattgttgtgattatttcaatgaaatagcttttcaaattgactgattaagtgattatacaaat 138147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 246 - 346
Target Start/End: Original strand, 42291844 - 42291943
Alignment:
Q  246 aaagggtaaaacgaatgatttatgcgaagagaaaaatgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaat 345  Q
    |||||| |||||||||| |||||| ||| | | |||||||||||||||||||||||||||||||| ||| |||||||| | |||||||||||||||||||    
T  42291844 aaaggggaaaacgaatggtttatgtgaaaa-agaaatgattgttgtgattctttcaatgaaatagattttcaaattgactgattaagtgattatacaaat 42291942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 244 - 353
Target Start/End: Original strand, 36718526 - 36718636
Alignment:
Q  244 aaaaagggtaaaacgaatgatttatgcgaagagaaaaa-tgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattataca 342  Q
    ||||| ||||||||||||| |||||||||||| ||||| | || ||||||||||||||||| ||||| |||| |||||||| | ||||| ||||||||||    
T  36718526 aaaaatggtaaaacgaatggtttatgcgaagaaaaaaaattatggttgtgattctttcaataaaataactttacaaattgactgattaaatgattataca 36718625  T
Q  343 aattaagggtg 353  Q
    ||||| |||||    
T  36718626 aattaggggtg 36718636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 246 - 346
Target Start/End: Original strand, 17513899 - 17513998
Alignment:
Q  246 aaagggtaaaacgaatgatttatgcgaagagaaaaatgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaat 345  Q
    |||||| |||||||||| |||||| ||| | | ||||||||||||||||||||||| ||||||| |||| |||||||| | |||||||||||||||||||    
T  17513899 aaagggaaaaacgaatggtttatgtgaaaa-agaaatgattgttgtgattctttcagtgaaataacttttcaaattgactgattaagtgattatacaaat 17513997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 246 - 346
Target Start/End: Complemental strand, 43511719 - 43511620
Alignment:
Q  246 aaagggtaaaacgaatgatttatgcgaagagaaaaatgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaat 345  Q
    |||||| |||||||||| |||||  ||| | | |||||||||||||||||||||| ||||||||||||| |||||||| | |||||||||||||||||||    
T  43511719 aaagggaaaaacgaatggtttatatgaaaa-agaaatgattgttgtgattctttccatgaaatagcttttcaaattgactgattaagtgattatacaaat 43511621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 279 - 346
Target Start/End: Complemental strand, 20976054 - 20975987
Alignment:
Q  279 aaatgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaatt 346  Q
    |||||||||||||||||||||||||||||||||||| |||||||| | ||||| ||||||||||||||    
T  20976054 aaatgattgttgtgattctttcaatgaaatagcttttcaaattgactgattaaatgattatacaaatt 20975987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 246 - 353
Target Start/End: Complemental strand, 29156291 - 29156185
Alignment:
Q  246 aaagggtaaaacgaatgatttatgcgaagagaaaaatgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaat 345  Q
    |||||| |||||||||| |||||  ||| | | ||||||||||||||||||||||||||||||| ||||  ||||||| | |||||||||||||||||||    
T  29156291 aaaggggaaaacgaatggtttatatgaaaa-agaaatgattgttgtgattctttcaatgaaataactttttaaattgactgattaagtgattatacaaat 29156193  T
Q  346 taagggtg 353  Q
    || |||||    
T  29156192 taggggtg 29156185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 253 - 346
Target Start/End: Original strand, 4734552 - 4734644
Alignment:
Q  253 aaaacgaatgatttatgcgaagagaaaaatgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaatt 346  Q
    |||||||||| |||||| ||| | | |||||||||||||||||||||||||||||||| ||| |||||||||| || ||| |||||||||||||    
T  4734552 aaaacgaatggtttatgtgaaaa-agaaatgattgttgtgattctttcaatgaaatagattttcaaattgagtgatcaagggattatacaaatt 4734644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 246 - 346
Target Start/End: Complemental strand, 5829484 - 5829387
Alignment:
Q  246 aaagggtaaaacgaatgatttatgcgaagagaaaaatgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaat 345  Q
    |||||| |||||||||| |||||| ||| | | ||||||||||||||||||||| ||||||||||||||  ||||||| | |||||||||||||||||||    
T  5829484 aaagggaaaaacgaatggtttatgtgaaaa-agaaatgattgttgtgattcttttaatgaaatagcttt--aaattgactgattaagtgattatacaaat 5829388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 246 - 346
Target Start/End: Original strand, 10591236 - 10591335
Alignment:
Q  246 aaagggtaaaacgaatgatttatgcgaagagaaaaatgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaat 345  Q
    |||||| | |||||||||||| || ||| | | ||||||||||||||||||||||||||||||| |||| |||||| | | |||||||||||||||||||    
T  10591236 aaaggggataacgaatgatttttgtgaaaa-ataaatgattgttgtgattctttcaatgaaataacttttcaaattaactgattaagtgattatacaaat 10591334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 279 - 348
Target Start/End: Complemental strand, 18873526 - 18873457
Alignment:
Q  279 aaatgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaattaa 348  Q
    |||| ||||||||||||||||||||||||||||||| |||||||  | |||||||| |||||||||||||    
T  18873526 aaataattgttgtgattctttcaatgaaatagcttttcaaattggctgattaagtggttatacaaattaa 18873457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 195 - 346
Target Start/End: Complemental strand, 40956465 - 40956315
Alignment:
Q  195 gtgaaatttatctaacagtgtggtttgca-ttgtcactactctgttgtggaaaaagggtaaaacgaatgatttatgcgaagagaaaaatgattgttgtga 293  Q
    |||||||||||||||| | || ||||| | ||||||||  ||  ||||||  |||||| |||||||||| | ||||| || | | |||||||||||||||    
T  40956465 gtgaaatttatctaacggcgtcgtttggatttgtcactcttccattgtgg-gaaaggggaaaacgaatggtgtatgc-aaaaaagaaatgattgttgtga 40956368  T
Q  294 ttctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaatt 346  Q
    |||||| |||||||||| ||| |||||| | | ||||||||||||||||||||    
T  40956367 ttcttttaatgaaatagtttttcaaattaaatgattaagtgattatacaaatt 40956315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 246 - 344
Target Start/End: Original strand, 7390363 - 7390460
Alignment:
Q  246 aaagggtaaaacgaatgatttatgcgaagagaaaaatgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaa 344  Q
    |||||| |||||||||| |||||||||| | | |||| ||||| ||||||||||| |||||||| ||||  ||||||| | ||||||||||||||||||    
T  7390363 aaaggggaaaacgaatggtttatgcgaaaa-agaaataattgtcgtgattctttcgatgaaataactttttaaattgactgattaagtgattatacaaa 7390460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 279 - 345
Target Start/End: Complemental strand, 33281743 - 33281677
Alignment:
Q  279 aaatgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaat 345  Q
    |||||||| ||| |||||||||||||||||| ||||  ||||||| |||||||||||||||||||||    
T  33281743 aaatgattattgggattctttcaatgaaataactttttaaattgactaattaagtgattatacaaat 33281677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 246 - 339
Target Start/End: Original strand, 3349692 - 3349784
Alignment:
Q  246 aaagggtaaaacgaatgatttatgcgaagagaaaaatgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattat 339  Q
    |||||| |||||||| | |||||| ||| | | |||||||||||||||||||||| ||||||||||||| |||||||| | ||||||| |||||    
T  3349692 aaaggggaaaacgaacggtttatgtgaaaa-agaaatgattgttgtgattctttctatgaaatagcttttcaaattgactgattaagtcattat 3349784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 246 - 345
Target Start/End: Complemental strand, 17325946 - 17325847
Alignment:
Q  246 aaagggtaaaacgaatgatttatgcgaagagaaaaatgattgttgtgattctttcaatgaaatag-ctttccaaattgagtaattaagtgattatacaaa 344  Q
    |||||| ||| |||||| |||||||||| | | |||| |||||||||||||||||||||||||||  ||| |||||||| | ||||||||||||| ||||    
T  17325946 aaaggggaaagcgaatggtttatgcgaaaa-agaaataattgttgtgattctttcaatgaaatagttttttcaaattgactgattaagtgattattcaaa 17325848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 253 - 346
Target Start/End: Complemental strand, 931469 - 931382
Alignment:
Q  253 aaaacgaatgatttatgcgaagagaaaaatgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaatt 346  Q
    |||||||||| |||||||||| | | |||||||| ||||||||||||||||     ||||||| ||||||| | ||||||||||||||||||||    
T  931469 aaaacgaatggtttatgcgaaaa-agaaatgattattgtgattctttcaat-----agctttctaaattgactgattaagtgattatacaaatt 931382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 293 - 346
Target Start/End: Complemental strand, 27351404 - 27351351
Alignment:
Q  293 attctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaatt 346  Q
    ||||||||||||||||| ||||||||||||| | |||||||| |||||||||||    
T  27351404 attctttcaatgaaataactttccaaattgactgattaagtggttatacaaatt 27351351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 253 - 323
Target Start/End: Complemental strand, 10033641 - 10033572
Alignment:
Q  253 aaaacgaatgatttatgcgaagagaaaaatgattgttgtgattctttcaatgaaatagctttccaaattga 323  Q
    |||||||||| |||||||||| | | |||| ||| |||||||||||||||| |||||||||| ||||||||    
T  10033641 aaaacgaatggtttatgcgaaaa-agaaataattattgtgattctttcaataaaatagcttttcaaattga 10033572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 253 - 346
Target Start/End: Complemental strand, 40779286 - 40779194
Alignment:
Q  253 aaaacgaatgatttatgcgaagagaaaaatgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaatt 346  Q
    |||||||||| ||||| |||| | | ||||||||||||||||||  |||||| ||||| ||| |||||||| | |||||  |||||||||||||    
T  40779286 aaaacgaatggtttatacgaaaaaagaaatgattgttgtgattc-ctcaatggaatagtttttcaaattgacttattaaacgattatacaaatt 40779194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 279 - 339
Target Start/End: Complemental strand, 16515593 - 16515533
Alignment:
Q  279 aaatgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattat 339  Q
    |||| |||||||||||||||||||| |||||  ||| |||||||| | |||||||||||||    
T  16515593 aaataattgttgtgattctttcaataaaataatttttcaaattgattgattaagtgattat 16515533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 291 - 346
Target Start/End: Complemental strand, 23069277 - 23069222
Alignment:
Q  291 tgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaatt 346  Q
    ||||||||  |||||||||||||||||||| || | |||||| |||||||||||||    
T  23069277 tgattcttgtaatgaaatagctttccaaatcgaatgattaagggattatacaaatt 23069222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 106; Significance: 6e-53; HSPs: 34)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 183 - 355
Target Start/End: Original strand, 28132635 - 28132806
Alignment:
Q  183 taagtaaaagatgtgaaatttatctaacagtgtggtttgca-ttgtcactactctgttgtggaaaaagggtaaaacgaatgatttatgcgaagagaaaaa 281  Q
    ||||| ||||| |||||||||||||||| | || ||||| | |||||||| ||||||||||||||| || ||||||||||| |||||||||||| |||||    
T  28132635 taagtgaaagaggtgaaatttatctaacggcgtcgtttgaacttgtcactcctctgttgtggaaaatgg-taaaacgaatggtttatgcgaaga-aaaaa 28132732  T
Q  282 tgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaattaagggtgat 355  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||    
T  28132733 tgattgttgtgattctttcaatgaaatagctttccaaattgactgattaagtgattatacaaattaagggtgat 28132806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 183 - 347
Target Start/End: Original strand, 52655022 - 52655186
Alignment:
Q  183 taagtaaaagatgtgaaatttatctaacagtgtggtttgcatt-gtcactactctgttgtggaaaaagggtaaaacgaatgatttatgcgaagagaaaaa 281  Q
    ||||| ||||| |||||||||||||||| || | ||||| ||| |||||| || |||||||||||| |||||||||||||| ||||||||| || |||||    
T  52655022 taagtgaaagaggtgaaatttatctaacggtatcgtttgaatttgtcactcctatgttgtggaaaa-gggtaaaacgaatggtttatgcgaggaaaaaaa 52655120  T
Q  282 tgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaatta 347  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||    
T  52655121 tgattgttgtgattctttcaatgaaatagctttccaaattgactgattaagtgattatacaaatta 52655186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 183 - 353
Target Start/End: Original strand, 21784682 - 21784853
Alignment:
Q  183 taagtaaaagatgtgaaatttatctaacagtgtggtttgcatt-gtcactactctgttgtggaaaaagggtaaaacgaatgatttatgcgaagagaaaa- 280  Q
    ||||| ||||| |||||||||||||||| | || ||||| ||| |||||| ||||||||||||||| |||||||||||||| |||||||||||| ||||     
T  21784682 taagtgaaagaggtgaaatttatctaacggcgtcgtttggatttgtcactcctctgttgtggaaaa-gggtaaaacgaatggtttatgcgaagaaaaaaa 21784780  T
Q  281 atgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaattaagggtg 353  Q
    ||||||||||||||||||||||||||||||||||||||||| | | ||||||||||||||||||||| |||||    
T  21784781 atgattgttgtgattctttcaatgaaatagctttccaaattaactgattaagtgattatacaaattaggggtg 21784853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 183 - 353
Target Start/End: Original strand, 23164471 - 23164641
Alignment:
Q  183 taagtaaaagatgtgaaatttatctaacagtgtggtttgcatt-gtcactactctgttgtggaaaaagggtaaaacgaatgatttatgcgaagagaaaaa 281  Q
    ||||| ||||| |||||||||||| ||| |||| ||||| ||| |||||| |||||||||||||||||| ||||||||||| |||||||||||| |||||    
T  23164471 taagtgaaagaggtgaaatttatccaacggtgtcgtttggatttgtcactcctctgttgtggaaaaagg-taaaacgaatggtttatgcgaagaaaaaaa 23164569  T
Q  282 tgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaattaagggtg 353  Q
    | |||||||||||||||||||||||||||  ||||||||||| | ||||||||||||||||||||| |||||    
T  23164570 ttattgttgtgattctttcaatgaaatagacttccaaattgattgattaagtgattatacaaattaggggtg 23164641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 183 - 353
Target Start/End: Complemental strand, 24252785 - 24252615
Alignment:
Q  183 taagtaaaagatgtgaaatttatctaacagtgtggtttgcatt-gtcactactctgttgtggaaaaagggtaaaacgaatgatttatgcgaagagaaaaa 281  Q
    ||||| ||||| |||||||||||||||| | || ||||| ||| ||||||  |||||||||||||| |||||||||||||| |||||||||||| |||||    
T  24252785 taagtgaaagaggtgaaatttatctaacggggtcgtttggatttgtcactcatctgttgtggaaaa-gggtaaaacgaatggtttatgcgaagaaaaaaa 24252687  T
Q  282 tgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaattaagggtg 353  Q
    ||||||||||||||||| || ||||||| ||||||||||||| | |||||||||||||||||||||||||||    
T  24252686 tgattgttgtgattcttgcactgaaataactttccaaattgactgattaagtgattatacaaattaagggtg 24252615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 183 - 353
Target Start/End: Original strand, 29387653 - 29387823
Alignment:
Q  183 taagtaaaagatgtgaaatttatctaacagtgtggtttgcatt-gtcactactctgttgtggaaaaagggtaaaacgaatgatttatgcgaagagaaaaa 281  Q
    ||||| ||||| |||||||||||||||| |||| ||||| ||| |||||| |||| |||| ||||| |||||||||||||| |||||||||||| |||||    
T  29387653 taagtgaaagaggtgaaatttatctaacggtgttgtttggatttgtcactcctctattgtagaaaa-gggtaaaacgaatggtttatgcgaagaaaaaaa 29387751  T
Q  282 tgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaattaagggtg 353  Q
    |||||||||||||||||||||||||||| |||| |||||||| | ||||||||||||||||||||| |||||    
T  29387752 tgattgttgtgattctttcaatgaaataacttttcaaattgattgattaagtgattatacaaattaggggtg 29387823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 183 - 353
Target Start/End: Original strand, 27729668 - 27729838
Alignment:
Q  183 taagtaaaagatgtgaaatttatctaacagtgtggtttgcatt-gtcactactctgttgtggaaaaagggtaaaacgaatgatttatgcgaagagaaaaa 281  Q
    ||||| ||||| ||||||||||||||||||||| ||||| ||| |||||| || ||||||| ||||||||||||||||||| |||||||||||| || ||    
T  27729668 taagtgaaagaggtgaaatttatctaacagtgtcgtttggatttgtcacttctatgttgtg-aaaaagggtaaaacgaatggtttatgcgaagaaaataa 27729766  T
Q  282 tgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaattaagggtg 353  Q
    ||||||||||||||||||| || |||| |||||||||||||| | |||| |||||||||||||||| |||||    
T  27729767 tgattgttgtgattctttcgatcaaattgctttccaaattgattgattatgtgattatacaaattaggggtg 27729838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 183 - 347
Target Start/End: Original strand, 25598986 - 25599149
Alignment:
Q  183 taagtaaaagatgtgaaatttatctaacagtgtggtttgcatt-gtcactactctgttgtggaaaaagggtaaaacgaatgatttatgcgaagagaaaaa 281  Q
    ||||| ||||| |||||||||||||||| |||| ||||| ||| |||||| ||||||||||||||| |||||||||||||| |||||||||||| ||| |    
T  25598986 taagtgaaagaggtgaaatttatctaacggtgtcgtttgaatttgtcactcctctgttgtggaaaa-gggtaaaacgaatggtttatgcgaaga-aaaca 25599083  T
Q  282 tgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaatta 347  Q
    ||||||||||||||||||||||||||||| ||| |||||||| | |||||||||||||| ||||||    
T  25599084 tgattgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattatataaatta 25599149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 183 - 347
Target Start/End: Original strand, 46791596 - 46791760
Alignment:
Q  183 taagtaaaagatgtgaaatttatctaacagtgtggtttgcatt-gtcactactctgttgtggaaaaagggtaaaacgaatgatttatgcgaagagaaaaa 281  Q
    ||||| ||||| |||||||||||||||| |||| ||||| ||| |||||| ||||||||||||||| |||| ||  ||||| |||||||||||| |||||    
T  46791596 taagtgaaagaggtgaaatttatctaacggtgtcgtttggatttgtcactcctctgttgtggaaaa-gggtcaagtgaatggtttatgcgaagaaaaaaa 46791694  T
Q  282 tgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaatta 347  Q
    ||||||||||||||||| ||||||||||| |||||||||||| | |||||||||||||||||||||    
T  46791695 tgattgttgtgattcttgcaatgaaatagttttccaaattgactgattaagtgattatacaaatta 46791760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 183 - 353
Target Start/End: Complemental strand, 8364338 - 8364167
Alignment:
Q  183 taagtaaaagatgtgaaatttatctaacagtgtggtttgcatt-gtcactactctgttgtggaaaaagggtaaaacgaatgatttatgcgaagagaaaaa 281  Q
    ||||| ||||| |||||||||||||||| |||| ||||| ||| ||| || ||||||||||||||| ||||||||| |||| ||| |||||||| |||||    
T  8364338 taagtgaaagaggtgaaatttatctaacggtgtcgtttggatttgtctctcctctgttgtggaaaa-gggtaaaacaaatggtttgtgcgaagaaaaaaa 8364240  T
Q  282 -tgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaattaagggtg 353  Q
     |||||||||||||||||||||||||||| ||||||||||||| | ||||||||||||||||||||| |||||    
T  8364239 atgattgttgtgattctttcaatgaaataactttccaaattgactgattaagtgattatacaaattaggggtg 8364167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 183 - 353
Target Start/End: Complemental strand, 18408356 - 18408186
Alignment:
Q  183 taagtaaaagatgtgaaatttatctaacagtgtggtttgcatt-gtcactactctgttgtggaaaaagggtaaaacgaatgatttatgcgaagagaaaaa 281  Q
    ||||| ||||| |||||||||||| ||| |||| ||||| ||| |||||| ||||||||||||||| |||||||||||||  |||||||||| | |||||    
T  18408356 taagtgaaagaggtgaaatttatcaaacggtgtcgtttggatttgtcactgctctgttgtggaaaa-gggtaaaacgaattgtttatgcgaaaaaaaaaa 18408258  T
Q  282 tgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaattaagggtg 353  Q
    ||||||||||||||||||||||| | ||||||| |||||||| | ||||||||||||||||||||| |||||    
T  18408257 tgattgttgtgattctttcaatggattagcttttcaaattgactgattaagtgattatacaaattaggggtg 18408186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 183 - 353
Target Start/End: Original strand, 51939454 - 51939625
Alignment:
Q  183 taagtaaaagatgtgaaatttatctaacagtgtggtttgcatt-gtcactactctgttgtggaaaaagggtaaaacgaatgatttatgcgaagagaaaa- 280  Q
    ||||| ||||| |||||||||| | ||| |||| ||||| ||| |||||| || |||||||||||| |||||||||||||| |||||| ||||| ||||     
T  51939454 taagtgaaagaggtgaaatttaaccaactgtgtcgtttggatttgtcacttctatgttgtggaaaa-gggtaaaacgaatggtttatgtgaagaaaaaaa 51939552  T
Q  281 atgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaattaagggtg 353  Q
    |||||||||||||||||||||||||||||||||| |||||||| | ||||||||||||||||||||| |||||    
T  51939553 atgattgttgtgattctttcaatgaaatagcttttcaaattgactgattaagtgattatacaaattaggggtg 51939625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 195 - 353
Target Start/End: Original strand, 41706963 - 41707124
Alignment:
Q  195 gtgaaatttatctaacagtgtggtttgcatt-gtcactactctgttgtggaaaaagggtaaaacgaatgatttatgcgaagagaaaa---atgattgttg 290  Q
    ||||||||||||||||  ||| ||||| ||| |||||| ||||| |||| |||||||||||| |||||| |||||||||||| ||||   ||||||||||    
T  41706963 gtgaaatttatctaacgttgtcgtttggatttgtcactcctctggtgtg-aaaaagggtaaagcgaatggtttatgcgaagaaaaaaaaaatgattgttg 41707061  T
Q  291 tgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaattaagggtg 353  Q
    |||||||||||||||||||||||| |||||||| | ||||||||||||| ||||||| |||||    
T  41707062 tgattctttcaatgaaatagcttttcaaattgactgattaagtgattatgcaaattaggggtg 41707124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 189 - 349
Target Start/End: Complemental strand, 13401619 - 13401458
Alignment:
Q  189 aaagatgtgaaatttatctaacagtgtggtttgcatt-gtcactactctgttgtggaaaaagggtaaaacgaatgatttatgcga-agagaaaaatgatt 286  Q
    ||||| ||||||||||||| || |||| ||||| ||| | |||| ||||||||||||||| ||||||||| |||| ||||||||  | | ||||||||||    
T  13401619 aaagaggtgaaatttatcttacggtgtcgtttgaatttggcactcctctgttgtggaaaa-gggtaaaacaaatggtttatgcgggaaaaaaaaatgatt 13401521  T
Q  287 gttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaattaag 349  Q
    |||||||||||| ||||||||||||||| |||||||| | |||||||||||||||||||||||    
T  13401520 gttgtgattcttccaatgaaatagcttttcaaattgactgattaagtgattatacaaattaag 13401458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 183 - 323
Target Start/End: Complemental strand, 6715604 - 6715464
Alignment:
Q  183 taagtaaaagatgtgaaatttatctaacagtgtggtttgcatt-gtcactactctgttgtggaaaaagggtaaaacgaatgatttatgcgaagagaaaaa 281  Q
    ||||| ||||| ||||||||||| |||  |||| ||||| ||| |||||| |||||||||||||||||||||||||||||| |||||||||| | |||||    
T  6715604 taagtgaaagaggtgaaatttatataatggtgtcgtttggatttgtcactcctctgttgtggaaaaagggtaaaacgaatggtttatgcgaa-aaaaaaa 6715506  T
Q  282 tgattgttgtgattctttcaatgaaatagctttccaaattga 323  Q
    |||||||| ||||||||||||||||||| ||||| |||||||    
T  6715505 tgattgttatgattctttcaatgaaataactttcaaaattga 6715464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 236 - 353
Target Start/End: Complemental strand, 54430663 - 54430547
Alignment:
Q  236 tgttgtggaaaaagggtaaaacgaatgatttatgcgaagagaaaaatgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtga 335  Q
    |||||||||||| |||||||||||||| |||||||||||| ||||||||||||||  ||||||| ||||||||| |||| |||||||| | |||||||||    
T  54430663 tgttgtggaaaa-gggtaaaacgaatggtttatgcgaagaaaaaaatgattgttgcaattcttttaatgaaataacttttcaaattgactgattaagtga 54430565  T
Q  336 ttatacaaattaagggtg 353  Q
    |||||||||||| |||||    
T  54430564 ttatacaaattaggggtg 54430547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 183 - 345
Target Start/End: Complemental strand, 20762214 - 20762052
Alignment:
Q  183 taagtaaaagatgtgaaatttatctaacagtgtggtttgcatt-gtcactactctgttgtggaaaaagggtaaaacgaatgatttatgcgaagagaaaaa 281  Q
    ||||| ||||| |||||||||||  ||| || | ||||| ||| |||||| |||| |||||||||| |||||||||||||| ||||||||| || |||||    
T  20762214 taagtgaaagaggtgaaatttattcaacggtatcgtttgtatttgtcactcctctattgtggaaaa-gggtaaaacgaatggtttatgcgacgaaaaaaa 20762116  T
Q  282 tgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaat 345  Q
    |||||||| ||||||||||||||||||||  ||||||||| | | || ||||||||||||||||    
T  20762115 tgattgttatgattctttcaatgaaatagacttccaaattaactgatcaagtgattatacaaat 20762052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 183 - 353
Target Start/End: Original strand, 23067623 - 23067794
Alignment:
Q  183 taagtaaaagatgtgaaatttatctaacagtgtggtttgcattgt-cactactctgttgtggaaaaagggtaaaacgaatgatttatgcgaagagaaaaa 281  Q
    ||||| ||||| |||||||||||||||| ||||  |||| ||| | |||| ||||||||||||||| ||||||||| |||| ||||||||||   |||||    
T  23067623 taagtgaaagaggtgaaatttatctaacggtgtcatttggatttttcactcctctgttgtggaaaa-gggtaaaacaaatggtttatgcgaattaaaaaa 23067721  T
Q  282 tgattgt-tgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaattaagggtg 353  Q
    ||||||| ||||||||||| ||||||||| |||| |||||||| |  | |||||||||||||||||| |||||    
T  23067722 tgattgtgtgtgattctttaaatgaaataacttttcaaattgactggtgaagtgattatacaaattaggggtg 23067794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 183 - 291
Target Start/End: Original strand, 27110771 - 27110879
Alignment:
Q  183 taagtaaaagatgtgaaatttatctaacagtgtggtttgcatt-gtcactactctgttgtggaaaaagggtaaaacgaatgatttatgcgaagagaaaaa 281  Q
    ||||| ||||| |||||||||||||||| |||| ||||| ||| |||||| ||||||||||||||| |||||||||||||| |||||||||||  |||||    
T  27110771 taagtgaaagaggtgaaatttatctaacggtgtcgtttgaatttgtcactcctctgttgtggaaaa-gggtaaaacgaatggtttatgcgaaggaaaaaa 27110869  T
Q  282 tgattgttgt 291  Q
    ||||||||||    
T  27110870 tgattgttgt 27110879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 246 - 346
Target Start/End: Original strand, 36538149 - 36538248
Alignment:
Q  246 aaagggtaaaacgaatgatttatgcgaagagaaaaatgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaat 345  Q
    |||||| |||||||||| |||||||||| | | |||| ||||||||||||||||||||||||||| ||| |||||||| | |||||||||||||||||||    
T  36538149 aaaggggaaaacgaatggtttatgcgaaaa-agaaataattgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattatacaaat 36538247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 277 - 346
Target Start/End: Complemental strand, 7767134 - 7767065
Alignment:
Q  277 aaaaatgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaatt 346  Q
    |||||| ||||||||||||||||||||||||||||||| |||||||| | ||||||||||||||||||||    
T  7767134 aaaaataattgttgtgattctttcaatgaaatagcttttcaaattgactgattaagtgattatacaaatt 7767065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 279 - 346
Target Start/End: Complemental strand, 27303256 - 27303189
Alignment:
Q  279 aaatgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaatt 346  Q
    |||| ||||||||||||||||||||||||||||||| |||||||| | ||||||||||||||||||||    
T  27303256 aaataattgttgtgattctttcaatgaaatagcttttcaaattgattgattaagtgattatacaaatt 27303189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 253 - 346
Target Start/End: Original strand, 48626999 - 48627091
Alignment:
Q  253 aaaacgaatgatttatgcgaagagaaaaatgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaatt 346  Q
    |||||||||| |||||| ||| | | |||||||||||||||||||||||||||||||| ||| |||||||| | || |||||||||||||||||    
T  48626999 aaaacgaatggtttatgtgaaaa-ataaatgattgttgtgattctttcaatgaaatagattttcaaattgactgatcaagtgattatacaaatt 48627091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 246 - 346
Target Start/End: Original strand, 42009225 - 42009324
Alignment:
Q  246 aaagggtaaaacgaatgatttatgcgaagagaaaaatgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaat 345  Q
    |||||| |||||||||| |||||| ||| | | |||| |||||||||||||||||||||||||| ||||  ||||||| | |||||||||||||||||||    
T  42009225 aaaggggaaaacgaatggtttatgtgaaaa-agaaataattgttgtgattctttcaatgaaataactttttaaattgactgattaagtgattatacaaat 42009323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 246 - 346
Target Start/End: Original strand, 50677277 - 50677376
Alignment:
Q  246 aaagggtaaaacgaatgatttatgcgaagagaaaaatgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaat 345  Q
    |||||| |||||||||  |||||||||| | | |||| |||||||||||| |||||||||||||| ||| |||||||| | |||||||||||||||||||    
T  50677277 aaaggggaaaacgaattgtttatgcgaaaa-agaaataattgttgtgattgtttcaatgaaatagtttttcaaattgactgattaagtgattatacaaat 50677375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 279 - 346
Target Start/End: Complemental strand, 21596404 - 21596337
Alignment:
Q  279 aaatgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaatt 346  Q
    ||||||||||||||||||||  |||||||||||||||||||| || | ||||||||||||||||||||    
T  21596404 aaatgattgttgtgattcttgtaatgaaatagctttccaaatcgactgattaagtgattatacaaatt 21596337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 224 - 341
Target Start/End: Complemental strand, 15987322 - 15987207
Alignment:
Q  224 ttgtcactactctgttgtggaaaaagggtaaaacgaatgatttatgcgaagagaaaaatgattgttgtgattctttcaatgaaatagctttccaaattga 323  Q
    |||||||| ||| ||||||| ||| ||| |||||||||| |||||||||| | | ||||||| ||||| ||||||| ||||||||| ||||| |||||||    
T  15987322 ttgtcactcctccgttgtgggaaa-gggaaaaacgaatggtttatgcgaaaa-ataaatgatagttgtaattcttttaatgaaataactttcgaaattga 15987225  T
Q  324 gtaattaagtgattatac 341  Q
     | |||||||||||||||    
T  15987224 atgattaagtgattatac 15987207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 253 - 346
Target Start/End: Original strand, 19965850 - 19965942
Alignment:
Q  253 aaaacgaatgatttatgcgaagagaaaaatgattgtt-gtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaatt 346  Q
    |||||||||| ||||||||  |  ||||||||||||| |||||||||| |||||||||||||| ||| || | ||||||||||||||||||||||    
T  19965850 aaaacgaatggtttatgcg--ggaaaaaatgattgtttgtgattcttttaatgaaatagcttttcaatttaactaattaagtgattatacaaatt 19965942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 279 - 346
Target Start/End: Complemental strand, 46904811 - 46904744
Alignment:
Q  279 aaatgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaatt 346  Q
    |||| ||||||||||||||||||||||||||| |||  ||||||| | ||||||||||||||||||||    
T  46904811 aaataattgttgtgattctttcaatgaaatagttttttaaattgactgattaagtgattatacaaatt 46904744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 198 - 336
Target Start/End: Complemental strand, 51147085 - 51146949
Alignment:
Q  198 aaatttatctaacagtgtggtttgcattgtcactactctgttgtggaaaaagggtaaaacgaatgatttatgcgaagagaaaaa-tgattgttgtgattc 296  Q
    ||||||| ||||| |||| ||||| | ||||||| || ||| || ||||| ||  |||||||||| ||||||||| |||||||| | |||||||||||||    
T  51147085 aaatttacctaacggtgtcgtttggaatgtcacttctatgtcgtagaaaaggg--aaaacgaatggtttatgcga-gagaaaaaataattgttgtgattc 51146989  T
Q  297 tttcaatgaaatagctttccaaattgagtaattaagtgat 336  Q
    ||||||| |||||| |||  ||||||| | ||||||||||    
T  51146988 tttcaataaaatagttttttaaattgactgattaagtgat 51146949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 246 - 348
Target Start/End: Original strand, 1255015 - 1255114
Alignment:
Q  246 aaagggtaaaacgaatgatttatgcgaagagaaaaatgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaat 345  Q
    |||||| |||||||||| |||||||||| | | |||| |||||||  ||||||||||||||||| ||||| |||||||   ||||||| |||||||||||    
T  1255015 aaaggggaaaacgaatggtttatgcgaaaa-acaaattattgttg--attctttcaatgaaataactttctaaattgaccgattaagtcattatacaaat 1255111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 279 - 346
Target Start/End: Original strand, 40152124 - 40152192
Alignment:
Q  279 aaatgattgttgtgattc-tttcaatgaaatagctttccaaattgagtaattaagtgattatacaaatt 346  Q
    |||||||||||||||||| ||| |||||||||| ||| ||||||||   ||||||||||||||||||||    
T  40152124 aaatgattgttgtgattcgttttaatgaaatagtttttcaaattgaccgattaagtgattatacaaatt 40152192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 283 - 346
Target Start/End: Original strand, 4207357 - 4207416
Alignment:
Q  283 gattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaatt 346  Q
    |||||||||||||||||    |||||| ||||||||||||| | ||||||||||||||||||||    
T  4207357 gattgttgtgattcttt----gaaatatctttccaaattgaatgattaagtgattatacaaatt 4207416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 282 - 355
Target Start/End: Original strand, 1649829 - 1649902
Alignment:
Q  282 tgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaattaagggtgat 355  Q
    ||||||||| ||  |||||| |||||||| ||| |||||||| | ||||||||||||||||||||  |||||||    
T  1649829 tgattgttgcgaagctttcagtgaaatagattttcaaattgaatgattaagtgattatacaaattgggggtgat 1649902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 100; Significance: 2e-49; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 195 - 353
Target Start/End: Complemental strand, 13585452 - 13585294
Alignment:
Q  195 gtgaaatttatctaacagtgtggtttgca-ttgtcactactctgttgtggaaaaagggtaaaacgaatgatttatgcgaagagaaaaatgattgttgtga 293  Q
    |||||||||||||||| | || ||||| | |||||||| ||||||||||||||| |||||||||||||| |||||||||||| |||||||||||||||||    
T  13585452 gtgaaatttatctaacggcgtcgtttggacttgtcactcctctgttgtggaaaa-gggtaaaacgaatggtttatgcgaagaaaaaaatgattgttgtga 13585354  T
Q  294 ttctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaattaagggtg 353  Q
    |||||||||||||||||||||||||||||| | ||||| ||||||||||||||| |||||    
T  13585353 ttctttcaatgaaatagctttccaaattgactgattaattgattatacaaattaggggtg 13585294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 195 - 349
Target Start/End: Original strand, 18420520 - 18420674
Alignment:
Q  195 gtgaaatttatctaacagtgtggtttgcatt-gtcactactctgttgtggaaaaagggtaaaacgaatgatttatgcgaagagaaaaatgattgttgtga 293  Q
    |||||||||||||||| |||| ||||| ||| |||||| |||||||||| ||||||| ||||||||||| |||||||||||| |||||||||||||||||    
T  18420520 gtgaaatttatctaacggtgtcgtttggatttgtcactcctctgttgtgaaaaaagg-taaaacgaatggtttatgcgaagaaaaaaatgattgttgtga 18420618  T
Q  294 ttctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaattaag 349  Q
    |||||||||||||| |||||| |||||||| | |||||||||||||||||||||||    
T  18420619 ttctttcaatgaaacagcttttcaaattgactgattaagtgattatacaaattaag 18420674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 184 - 355
Target Start/End: Complemental strand, 7858249 - 7858078
Alignment:
Q  184 aagtaaaagatgtgaaatttatctaacagtgtggtttgcattgt-cactactctgttgtggaaaaagggtaaaacgaatgatttatgcgaagagaaaaat 282  Q
    |||| ||||| |||||||||||||||| ||||  |||| ||| | |||| ||||||||||||||| |||||||||||||| |||||||||||| ||||||    
T  7858249 aagtgaaagaggtgaaatttatctaacggtgtcatttggatttttcactcctctgttgtggaaaa-gggtaaaacgaatggtttatgcgaagaaaaaaat 7858151  T
Q  283 gattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaattaagggtgat 355  Q
    ||||||||||||||||| |||||| || ||||||||||||| | ||||||||||||||||||||| |||||||    
T  7858150 gattgttgtgattctttaaatgaattaactttccaaattgactgattaagtgattatacaaattaggggtgat 7858078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 195 - 353
Target Start/End: Complemental strand, 3471753 - 3471595
Alignment:
Q  195 gtgaaatttatctaacagtgtggtttgcat-tgtcactactctgttgtggaaaaagggtaaaacgaatgatttatgcgaagagaaaaatgattgttgtga 293  Q
    |||||||||||||||| |||| ||||| || | ||||| ||||||||||||||| |||||||| ||||| || ||||||||| |||||||||||||||||    
T  3471753 gtgaaatttatctaacggtgtcgtttggatctatcactcctctgttgtggaaaa-gggtaaaatgaatggttcatgcgaagaaaaaaatgattgttgtga 3471655  T
Q  294 ttctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaattaagggtg 353  Q
    ||||||||||||||||||||| |||||||| | ||||||||||||||||||||| |||||    
T  3471654 ttctttcaatgaaatagcttttcaaattgactgattaagtgattatacaaattaggggtg 3471595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 189 - 353
Target Start/End: Original strand, 43926228 - 43926392
Alignment:
Q  189 aaagatgtgaaatttatctaacagtgtggtttgcatt-gtcactactctgttgtggaaaaagggtaaaacgaatgatttatgcgaagagaaaaatgattg 287  Q
    ||||| ||||||||||| |||| |||| ||||| ||| |||||| |||| |||||||||| ||||||| |||||| |||||||||||| |||||||||||    
T  43926228 aaagaggtgaaatttatgtaacggtgtcgtttggatttgtcactcctctattgtggaaaa-gggtaaagcgaatggtttatgcgaagaaaaaaatgattg 43926326  T
Q  288 ttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaattaagggtg 353  Q
    ||||||||||||||||||||||||||| |||||||| | ||||||| ||||||||||||| |||||    
T  43926327 ttgtgattctttcaatgaaatagcttttcaaattgactgattaagtaattatacaaattatgggtg 43926392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 183 - 347
Target Start/End: Original strand, 43967969 - 43968133
Alignment:
Q  183 taagtaaaagatgtgaaatttatctaacagtgtggtttgcatt-gtcactactctgttgtggaaaaagggtaaaacgaatgatttatgcgaagagaaaaa 281  Q
    ||||| ||||| |||||||||||||||   ||| ||||| ||| |||||| ||||||||||||||| | |||||||||||| |||||||||||| |||||    
T  43967969 taagtgaaagaggtgaaatttatctaaggatgtcgtttggatttgtcactcctctgttgtggaaaa-gagtaaaacgaatggtttatgcgaagaaaaaaa 43968067  T
Q  282 tgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaatta 347  Q
    |||||||||||||||||||||||||||| |||| |||||||| | |||||||||||||||||||||    
T  43968068 tgattgttgtgattctttcaatgaaataacttttcaaattgattgattaagtgattatacaaatta 43968133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 183 - 347
Target Start/End: Complemental strand, 18112282 - 18112117
Alignment:
Q  183 taagtaaaagatgtgaaatttatctaacagtgtggtttgcatt-gtcactactctgttgtggaaaaagggtaaaacgaatgatttatgcgaagagaaaaa 281  Q
    ||||| ||||| || ||||||||||||| |||| ||||| ||| |||||| |||| |||||||||| |||||||||||||| |||||||||||| |||||    
T  18112282 taagtgaaagaggttaaatttatctaacggtgtcgtttggatttgtcactcctctattgtggaaaa-gggtaaaacgaatggtttatgcgaagaaaaaaa 18112184  T
Q  282 -tgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaatta 347  Q
     |||||||||||||||||||||| |||||| |||||||||||| | |||||||||||||||||||||    
T  18112183 atgattgttgtgattctttcaataaaatagttttccaaattgactgattaagtgattatacaaatta 18112117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 195 - 347
Target Start/End: Original strand, 44664957 - 44665109
Alignment:
Q  195 gtgaaatttatctaacagtgtggtttgcatt-gtcactactctgttgtggaaaaagggtaaaacgaatgatttatgcgaagagaaaaatgattgttgtga 293  Q
    |||||||||||||||  || | ||||| ||| |||||| ||||||||||||||| |||||||||||||| |||||||||||| |||||||||||||||||    
T  44664957 gtgaaatttatctaatggtatcgtttggatttgtcactcctctgttgtggaaaa-gggtaaaacgaatggtttatgcgaagaaaaaaatgattgttgtga 44665055  T
Q  294 ttctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaatta 347  Q
    |||||||||||||||| |||||||||| || | |||||||||| ||||||||||    
T  44665056 ttctttcaatgaaataactttccaaatagactgattaagtgatgatacaaatta 44665109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 183 - 347
Target Start/End: Complemental strand, 1004222 - 1004059
Alignment:
Q  183 taagtaaaagatgtgaaatttatctaacagtgtggtttgcattgtcactactctgttgtggaaaaagggtaaaacgaatgatttatgcgaagagaaaaa- 281  Q
    ||||| ||||| |||||||||||||||| |||| |||||  |||||||| ||||||||||||||| |||||||||||||| ||||||||| || |||||     
T  1004222 taagtgaaagaggtgaaatttatctaacggtgtcgtttg--ttgtcactcctctgttgtggaaaa-gggtaaaacgaatggtttatgcgatgaaaaaaaa 1004126  T
Q  282 tgattgttgtgattctttcaatgaaat-agctttccaaattgagtaattaagtgattatacaaatta 347  Q
    ||||||||||||||||||||||||||| |  ||| |||||||| | |||||||||||||||||||||    
T  1004125 tgattgttgtgattctttcaatgaaataattttttcaaattgactgattaagtgattatacaaatta 1004059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 233 - 353
Target Start/End: Complemental strand, 27074688 - 27074569
Alignment:
Q  233 ctctgttgtggaaaaagggtaaaacgaatgatttatgcgaagagaaaaatgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaag 332  Q
    |||||||||||||||||| |||||| |||| |||||||||||| ||||||||||||||||||| ||||||||||||||  ||  ||||||| | ||||||    
T  27074688 ctctgttgtggaaaaagg-taaaacaaatggtttatgcgaagaaaaaaatgattgttgtgattttttcaatgaaatagacttttaaattgactgattaag 27074590  T
Q  333 tgattatacaaattaagggtg 353  Q
    ||||||||||||||| |||||    
T  27074589 tgattatacaaattaggggtg 27074569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 245 - 347
Target Start/End: Original strand, 42951726 - 42951832
Alignment:
Q  245 aaaagggtaaaacgaatgatttatgcgaagagaaaaatgattgt----tgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattata 340  Q
    |||||||||||||||||| |||||||||||| ||||||||||||    ||||||||||||||| ||||| |||| |||||||| | ||||||||||||||    
T  42951726 aaaagggtaaaacgaatggtttatgcgaagaaaaaaatgattgttgtgtgtgattctttcaataaaataacttttcaaattgactgattaagtgattata 42951825  T
Q  341 caaatta 347  Q
    |||||||    
T  42951826 caaatta 42951832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 195 - 349
Target Start/End: Original strand, 32098090 - 32098243
Alignment:
Q  195 gtgaaatttatctaacagtgtggtttgcatt-gtcactactctgttgtggaaaaagggtaaaacgaatgatttatgcgaagagaaaaatgattgttgtga 293  Q
    ||||||||||  |||| |||| ||||| ||| |||||| ||||||||||| ||  ||| |||||||||| ||||||| || | | |||| ||||||||||    
T  32098090 gtgaaatttacgtaacggtgtcgtttggattcgtcactcctctgttgtgggaatgggg-aaaacgaatggtttatgcaaaaa-agaaataattgttgtga 32098187  T
Q  294 ttctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaattaag 349  Q
    ||||||||||||||||| |||||||||||| | |||||||||| ||||||||||||    
T  32098188 ttctttcaatgaaatagttttccaaattgactgattaagtgatcatacaaattaag 32098243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 246 - 346
Target Start/End: Original strand, 34523914 - 34524013
Alignment:
Q  246 aaagggtaaaacgaatgatttatgcgaagagaaaaatgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaat 345  Q
    |||||| |||||||||| |||||  ||| | | |||||||||||||||||||||||||||||||||||| |||||||| | |||||||||||||||||||    
T  34523914 aaaggggaaaacgaatggtttatatgaaaa-agaaatgattgttgtgattctttcaatgaaatagcttttcaaattgactgattaagtgattatacaaat 34524012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 253 - 353
Target Start/End: Original strand, 3628717 - 3628816
Alignment:
Q  253 aaaacgaatgatttatgcgaagagaaaaatgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaattaagggt 352  Q
    |||||||||| |||||||||| | | |||| |||||||||||||||||||||||||| |||| |||||||| | |||| ||||||||||||||||| |||    
T  3628717 aaaacgaatggtttatgcgaaaa-agaaataattgttgtgattctttcaatgaaataacttttcaaattgactgattatgtgattatacaaattaatggt 3628815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 196 - 310
Target Start/End: Original strand, 36515069 - 36515182
Alignment:
Q  196 tgaaatttatctaacagtgtggtttgcattgtcactactctgttgtggaaaaagggtaaaacgaatgatttatgcgaagagaaaaatgattgttgtgatt 295  Q
    ||||||||||||||| |||| ||||| | ||||||| ||  || || | ||| ||| ||||| ||||||||||||||||| |||||| ||||||||||||    
T  36515069 tgaaatttatctaacggtgtcgtttggaatgtcactcctacgtcgtaggaaatggg-aaaacaaatgatttatgcgaagaaaaaaataattgttgtgatt 36515167  T
Q  296 ctttcaatgaaatag 310  Q
    |||||||||||||||    
T  36515168 ctttcaatgaaatag 36515182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 277 - 346
Target Start/End: Original strand, 5869315 - 5869384
Alignment:
Q  277 aaaaatgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaatt 346  Q
    |||||||||||||||||||||||||||||||||||||| |||||||| | ||||||||||| || |||||    
T  5869315 aaaaatgattgttgtgattctttcaatgaaatagcttttcaaattgactgattaagtgattttaaaaatt 5869384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 246 - 346
Target Start/End: Complemental strand, 12531660 - 12531561
Alignment:
Q  246 aaagggtaaaacgaatgatttatgcgaagagaaaaatgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaat 345  Q
    |||||| ||||| |||| |||||| ||| | | |||||||||||||||||||||||||||||||| |||  ||||||| | |||||||||||||||||||    
T  12531660 aaaggggaaaacaaatggtttatgtgaaaa-agaaatgattgttgtgattctttcaatgaaatagatttttaaattgactgattaagtgattatacaaat 12531562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 279 - 346
Target Start/End: Original strand, 39697933 - 39698000
Alignment:
Q  279 aaatgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaatt 346  Q
    |||| ||||||||||||||||||||||||||||||| |||||||| ||||||| |||| |||||||||    
T  39697933 aaataattgttgtgattctttcaatgaaatagcttttcaaattgactaattaaatgatcatacaaatt 39698000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 193 - 346
Target Start/End: Complemental strand, 29372510 - 29372359
Alignment:
Q  193 atgtgaaatttatctaacagtgtggtttgcattgtcactactctgttgtggaaaaagggtaaaacgaatgatttatgcgaagagaaaaatgattgttgtg 292  Q
    |||||||||||| ||||  |||| ||||| ||||||||| ||   | ||||  |||||| |||| ||||| |||||||||| | | |||||||||||||     
T  29372510 atgtgaaatttacctaatggtgtcgtttggattgtcactccttcatcgtgg-caaaggggaaaatgaatggtttatgcgaa-aaataaatgattgttgtc 29372413  T
Q  293 attctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaatt 346  Q
    |||||||||||  |||| ||||||||||||| | ||||| ||||||||||||||    
T  29372412 attctttcaattgaataactttccaaattgactgattaaatgattatacaaatt 29372359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 253 - 346
Target Start/End: Original strand, 23567244 - 23567336
Alignment:
Q  253 aaaacgaatgatttatgcgaagagaaaaatgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaatt 346  Q
    |||||||||| |||||| ||| | | |||| ||||||||||| |||||||||||||||  || |||||||| | ||||||||||||||||||||    
T  23567244 aaaacgaatggtttatgtgaaaa-agaaatcattgttgtgatactttcaatgaaatagtatttcaaattgactgattaagtgattatacaaatt 23567336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 254 - 342
Target Start/End: Original strand, 30915258 - 30915346
Alignment:
Q  254 aaacgaatgatttatgcgaagagaaaaatgattgttgtgattctttc-aatgaaatagctttccaaattgagtaattaagtgattataca 342  Q
    |||| ||| ||||||||||| | | |||||||||||||||||||||  |||||||||||||| |||||||| | ||||||||||||||||    
T  30915258 aaacaaattatttatgcgaaaa-agaaatgattgttgtgattctttttaatgaaatagcttttcaaattgactgattaagtgattataca 30915346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 224 - 330
Target Start/End: Complemental strand, 42777867 - 42777763
Alignment:
Q  224 ttgtcactactctgttgtggaaaaagggtaaaacgaatgatttatgcgaagagaaaaatgattgttgtgattctttcaatgaaatagctttccaaattga 323  Q
    |||||||| ||| ||||||| ||| | | |||||||||| | |||||| | | ||||||||||||||||||||||| ||| ||||||||||| |||||||    
T  42777867 ttgtcactcctccgttgtgggaaatgag-aaaacgaatggtatatgcggaaa-aaaaatgattgttgtgattcttttaattaaatagctttctaaattga 42777770  T
Q  324 gtaatta 330  Q
     ||||||    
T  42777769 ctaatta 42777763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 245 - 346
Target Start/End: Complemental strand, 42076212 - 42076110
Alignment:
Q  245 aaaagggtaaaacgaatgatttatgcgaagagaaa-aatgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaa 343  Q
    ||||||| |||||||||  |||||||| | | ||| ||| ||| || ||||||||||||||  |||||||| |||||||| | ||||||| |||||||||    
T  42076212 aaaaggggaaaacgaatagtttatgcggaaaaaaataattattattatgattctttcaatgttatagcttttcaaattgattgattaagttattatacaa 42076113  T
Q  344 att 346  Q
    |||    
T  42076112 att 42076110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 254 - 346
Target Start/End: Complemental strand, 33452885 - 33452793
Alignment:
Q  254 aaacgaatgatttatgcgaagagaaaaatgattgttgtgattc-tttcaatgaaatagctttccaaattgagtaattaagtgattatacaaatt 346  Q
    |||| ||||||||||||||| | | |||||||||||||||||| ||| | | ||||| |||| |||||||| ||||| |||||||||| |||||    
T  33452885 aaacaaatgatttatgcgaaaa-agaaatgattgttgtgattctttttattaaaataacttttcaaattgattaattgagtgattatataaatt 33452793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 279 - 346
Target Start/End: Complemental strand, 35874995 - 35874928
Alignment:
Q  279 aaatgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaatt 346  Q
    |||| ||||||||| ||||||| | ||||||| ||| ||||||||   ||||||||||||||||||||    
T  35874995 aaataattgttgtggttctttctaagaaatagtttttcaaattgaccgattaagtgattatacaaatt 35874928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 100; Significance: 2e-49; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 183 - 353
Target Start/End: Original strand, 12251187 - 12251357
Alignment:
Q  183 taagtaaaagatgtgaaatttatctaacagtgtggtttgcatt-gtcactactctgttgtggaaaaagggtaaaacgaatgatttatgcgaagagaaaaa 281  Q
    ||||| ||||| |||||||||||||||| |||  ||||| ||| |||||| ||||||||||||||| |||||||||||||| |||||||||||| |||||    
T  12251187 taagtgaaagaggtgaaatttatctaacggtgacgtttggatttgtcactcctctgttgtggaaaa-gggtaaaacgaatggtttatgcgaagaaaaaaa 12251285  T
Q  282 tgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaattaagggtg 353  Q
    |||||||||||||||||||||||||||||||||||||||||| | ||||| |||||||| |||||| |||||    
T  12251286 tgattgttgtgattctttcaatgaaatagctttccaaattgactgattaaatgattatagaaattaggggtg 12251357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 183 - 355
Target Start/End: Complemental strand, 33910229 - 33910057
Alignment:
Q  183 taagtaaaagatgtgaaatttatctaacagtgtggtttgcatt-gtcactactctgttgtggaaaaagggtaaaacgaatgatttatgcgaagagaaaaa 281  Q
    ||||| ||||| |||||||||||||||| |||| ||||| ||| || | | ||||||||||||||| |||||||||||||| |||||||||||| |||||    
T  33910229 taagtgaaagaggtgaaatttatctaacggtgtcgtttggatttgtaattcctctgttgtggaaaa-gggtaaaacgaatggtttatgcgaagaaaaaaa 33910131  T
Q  282 tgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaattaagggtgat 355  Q
    ||||||||||||||||||||||||||||||||| |||||||| | |||||| |||||||||||||| |||||||    
T  33910130 tgattgttgtgattctttcaatgaaatagcttttcaaattgactgattaagcgattatacaaattaggggtgat 33910057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 183 - 353
Target Start/End: Original strand, 6379983 - 6380153
Alignment:
Q  183 taagtaaaagatgtgaaatttatctaacagtgtggtttgcatt-gtcactactctgttgtggaaaaagggtaaaacgaatgatttatgcgaagagaaaaa 281  Q
    ||||| ||||| |||||||||||| |||| ||| ||||| ||| |||||| ||||||||||||||| |||||||||||||| |||||||||||| ||| |    
T  6379983 taagtgaaagaggtgaaatttatccaacaatgtcgtttggatttgtcactcctctgttgtggaaaa-gggtaaaacgaatggtttatgcgaagaaaaata 6380081  T
Q  282 tgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaattaagggtg 353  Q
    |||||||||||||||||||||||||||||  ||||||||||| | ||||||||||||||||||||| |||||    
T  6380082 tgattgttgtgattctttcaatgaaatagacttccaaattgattgattaagtgattatacaaattaggggtg 6380153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 183 - 352
Target Start/End: Original strand, 36796270 - 36796440
Alignment:
Q  183 taagtaaaagatgtgaaatttatctaacagtgtggtttgcatt-gtcactactctgttgtggaaaaagggtaaaacgaatgatttatgcgaagagaaaa- 280  Q
    ||||| ||||| |||||||||||||||| |||| ||||  ||| |||||| ||||||||||||||| |||||||||||||| |||||||||||| ||||     
T  36796270 taagtgaaagaggtgaaatttatctaacggtgtcgttttgatttgtcactcctctgttgtggaaaa-gggtaaaacgaatggtttatgcgaagaaaaaaa 36796368  T
Q  281 atgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaattaagggt 352  Q
    |||||||||||||||||||||||||||||  |||||||||||| | ||||||| ||||||||||||||||||    
T  36796369 atgattgttgtgattctttcaatgaaataattttccaaattgactgattaagttattatacaaattaagggt 36796440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 183 - 347
Target Start/End: Complemental strand, 11672751 - 11672587
Alignment:
Q  183 taagtaaaagatgtgaaatttatctaacagtgtggtttgcatt-gtcactactctgttgtggaaaaagggtaaaacgaatgatttatgcgaagagaaaaa 281  Q
    ||||| ||||| |||||||||||| |||  ||| ||||  ||| |||||| ||||||||||||||| | ||||||||||||||||||||||||| |||||    
T  11672751 taagtgaaagaggtgaaatttatcaaacgatgtcgtttagatttgtcactcctctgttgtggaaaa-gagtaaaacgaatgatttatgcgaagaaaaaaa 11672653  T
Q  282 tgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaatta 347  Q
    |||||||||||||||||||| ||||||| ||||||||||||| | |||||||||||||||||||||    
T  11672652 tgattgttgtgattctttcattgaaataactttccaaattgactgattaagtgattatacaaatta 11672587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 183 - 352
Target Start/End: Original strand, 33419016 - 33419186
Alignment:
Q  183 taagtaaaagatgtgaaatttatctaacagtgtggtttgcatt-gtcactactctgttgtggaaaaagggtaaaacgaatgatttatgcgaagagaaaaa 281  Q
    ||||| ||||| |||||||||||||||| |||| ||||| ||| |||||| ||||||||| ||||| || ||||||||||| |||||||||||| |||||    
T  33419016 taagtgaaagaggtgaaatttatctaacggtgtcgtttggatttgtcactcctctgttgtagaaaatgg-taaaacgaatggtttatgcgaagaaaaaaa 33419114  T
Q  282 tgattgttgtgattctttcaatgaaatagctttccaaattga-gtaattaagtgattatacaaattaagggt 352  Q
    ||||| |||||||||||||||||||||| |||| ||||||||  ||||||||||||||||||||||| ||||    
T  33419115 tgattattgtgattctttcaatgaaataacttttcaaattgacttaattaagtgattatacaaattaggggt 33419186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 183 - 353
Target Start/End: Original strand, 44893928 - 44894098
Alignment:
Q  183 taagtaaaagatgtgaaatttatctaacagtgtggtttgcatt-gtcactactctgttgtggaaaaagggtaaaacgaatgatttatgcgaagagaaaaa 281  Q
    ||||| ||||| ||||||||||| |||| |||| ||||| ||| || ||| || || ||||||||| |||||||||||||| |||||| ||||| |||||    
T  44893928 taagtgaaagaggtgaaatttatgtaacggtgtcgtttgaatttgtaactcctttgctgtggaaaa-gggtaaaacgaatggtttatgtgaagaaaaaaa 44894026  T
Q  282 tgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaattaagggtg 353  Q
    |||||||||||||||||||||| ||||||||||||||||||| | ||||||||||||||||||||| |||||    
T  44894027 tgattgttgtgattctttcaataaaatagctttccaaattgattgattaagtgattatacaaattaggggtg 44894098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 183 - 353
Target Start/End: Original strand, 42161021 - 42161189
Alignment:
Q  183 taagtaaaagatgtgaaatttatctaacagtgtggtttgcatt-gtcactactctgttgtggaaaaagggtaaaacgaatgatttatgcgaagagaaaaa 281  Q
    ||||| ||||| |||||||||||||||| |||| ||||| ||| |||||| |||||||||||||||||| ||||||||||| ||||||||||||  ||||    
T  42161021 taagtgaaagaggtgaaatttatctaacggtgtcgtttggatttgtcactcctctgttgtggaaaaagg-taaaacgaatggtttatgcgaaga--aaaa 42161117  T
Q  282 tgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaattaagggtg 353  Q
    |  ||| ||||||||||||||||||||||||||||||||| | | || |||||||||||||||||| |||||    
T  42161118 ttgttgctgtgattctttcaatgaaatagctttccaaattaactgatcaagtgattatacaaattaggggtg 42161189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 183 - 353
Target Start/End: Original strand, 18015479 - 18015651
Alignment:
Q  183 taagtaaaagatgtgaaatttatctaacagtgtggtttgcatt-gtcactactctgttgtggaaaaagggtaaaacgaatgatttatgcgaagagaaaaa 281  Q
    ||||| ||||| |||||||||||| ||| |||| ||||| ||| ||||||  ||||||||| |||| |||||||||||||| || ||||||||| |||||    
T  18015479 taagtgaaagaggtgaaatttatcaaacggtgtcgtttgaatttgtcacttttctgttgtgtaaaa-gggtaaaacgaatggttaatgcgaagaaaaaaa 18015577  T
Q  282 --tgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaattaagggtg 353  Q
      | |||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||| |||||    
T  18015578 aataattgttgtgattctttcaatgaaatagctttccaaattgattgattaagtgattatacaaattaggggtg 18015651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 224 - 353
Target Start/End: Complemental strand, 4100092 - 4099963
Alignment:
Q  224 ttgtcactactctgttgtggaaaaagggtaaaacgaatgatttatgcgaagagaaaaatgattgttgtgattctttcaatgaaatagctttccaaattga 323  Q
    |||||||| ||||||||||||||| ||  |||||||||| ||| |||||||| ||||||||||||||| |||||||||||||||||||||| ||||||||    
T  4100092 ttgtcactcctctgttgtggaaaagggtaaaaacgaatggtttttgcgaagaaaaaaatgattgttgtaattctttcaatgaaatagcttttcaaattga 4099993  T
Q  324 gtaattaagtgattatacaaattaagggtg 353  Q
     | ||||||||||||||||||||| |||||    
T  4099992 ttgattaagtgattatacaaattaggggtg 4099963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 234 - 352
Target Start/End: Original strand, 46221654 - 46221771
Alignment:
Q  234 tctgttgtggaaaaagggtaaaacgaatgatttatgcgaagagaaaaatgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagt 333  Q
    |||||||||||||| || ||||||||||| |||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||    
T  46221654 tctgttgtggaaaatgg-taaaacgaatggtttatgcgaataaaaaaatgattgttgtgattctttcaatgaaatagctttccaaattgactgattaagt 46221752  T
Q  334 gattatacaaattaagggt 352  Q
    |||| ||||||||| ||||    
T  46221753 gattctacaaattaggggt 46221771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 195 - 353
Target Start/End: Original strand, 7636236 - 7636395
Alignment:
Q  195 gtgaaatttatctaacagtgtggtttgcatt-gtcactactctgttgtggaaaaagggtaaaacgaatgatttatgcgaagagaaaa-atgattgttgtg 292  Q
    |||||||||||||||| || | ||||| ||| ||||||  |||||||||||||| ||||||||||||||  ||||| ||||| |||| |||||||||| |    
T  7636236 gtgaaatttatctaacggtatcgtttgaatttgtcactcttctgttgtggaaaa-gggtaaaacgaatggcttatgggaagaaaaaaaatgattgttgcg 7636334  T
Q  293 attctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaattaagggtg 353  Q
    |||||||||||||||||||||| |||||||| | ||||||| ||||||||||||| |||||    
T  7636335 attctttcaatgaaatagcttttcaaattgactgattaagtaattatacaaattaggggtg 7636395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 246 - 346
Target Start/End: Complemental strand, 26633464 - 26633365
Alignment:
Q  246 aaagggtaaaacgaatgatttatgcgaagagaaaaatgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaat 345  Q
    |||||| |||| ||||| |||||||||| | | |||||||||||||||||||||||||||||||||||| |||||||| | |||||||||||||||||||    
T  26633464 aaagggaaaaatgaatggtttatgcgaaaa-agaaatgattgttgtgattctttcaatgaaatagcttttcaaattgactgattaagtgattatacaaat 26633366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 253 - 346
Target Start/End: Original strand, 26282510 - 26282604
Alignment:
Q  253 aaaacgaatgatttatgcgaagagaaaa-atgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaatt 346  Q
    |||| |||||||||||  ||||| |||| |||||||||||||||||||||||||||||||||| |||||||| | ||||||||||||||||||||    
T  26282510 aaaatgaatgatttatatgaagaaaaaaaatgattgttgtgattctttcaatgaaatagcttttcaaattgactgattaagtgattatacaaatt 26282604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 195 - 346
Target Start/End: Complemental strand, 32956927 - 32956777
Alignment:
Q  195 gtgaaatttatctaacagtgtggtttgcatt-gtcactactctgttgtggaaaaagggtaaaacgaatgatttatgcgaagagaaaaatgattgttgtga 293  Q
    |||||||||| |||||||||| ||||| ||| ||||||  || ||||||| ||| ||| |||||||||| |||||||||| | | |||| ||||||||||    
T  32956927 gtgaaatttacctaacagtgtcgtttggatttgtcactcatccgttgtgggaaagggg-aaaacgaatggtttatgcgaaaa-agaaatcattgttgtga 32956830  T
Q  294 ttctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaatt 346  Q
    |||||||||||||||| ||||  ||||||| | ||||| |||||||| |||||    
T  32956829 ttctttcaatgaaataactttataaattgactgattaaatgattataaaaatt 32956777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 282 - 346
Target Start/End: Original strand, 40001694 - 40001758
Alignment:
Q  282 tgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaatt 346  Q
    ||||||||||||||||||||||||||||||||| |||||||| | ||||||||||||||||||||    
T  40001694 tgattgttgtgattctttcaatgaaatagcttttcaaattgactgattaagtgattatacaaatt 40001758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 253 - 355
Target Start/End: Original strand, 773852 - 773955
Alignment:
Q  253 aaaacgaatgatttatgcg-aagagaaaaatgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaattaaggg 351  Q
    |||||||||| |||||||  || | ||||||||||||||||||||||||||| |||||||||| |||||||| | || |||| ||||||||||||| |||    
T  773852 aaaacgaatggtttatgcacaaaaaaaaaatgattgttgtgattctttcaataaaatagcttttcaaattgactgataaagtaattatacaaattagggg 773951  T
Q  352 tgat 355  Q
    ||||    
T  773952 tgat 773955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 246 - 345
Target Start/End: Complemental strand, 42312110 - 42312012
Alignment:
Q  246 aaagggtaaaacgaatgatttatgcgaagagaaaaatgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaat 345  Q
    |||||| ||||||||| ||||| ||||| | | |||||| |||||||||||||| |||||||||||||| |||||||| |||| ||||||||||||||||    
T  42312110 aaaggggaaaacgaattatttaagcgaaaa-ataaatgactgttgtgattcttttaatgaaatagcttttcaaattgactaatcaagtgattatacaaat 42312012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 252 - 343
Target Start/End: Original strand, 3799730 - 3799819
Alignment:
Q  252 taaaacgaatgatttatgcgaagagaaaaatgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaa 343  Q
    ||||||||||| ||||||||  || ||||||||||||||||||||||||||||||||||||| | ||||||  | ||||| |||||||||||    
T  3799730 taaaacgaatggtttatgcg--gaaaaaaatgattgttgtgattctttcaatgaaatagcttccaaaattggcttattaaatgattatacaa 3799819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 195 - 346
Target Start/End: Original strand, 36438264 - 36438413
Alignment:
Q  195 gtgaaatttatctaacagtgtggtttgcattgtcactactctgttgtggaaaaagggtaaaacgaatgatttatgcgaagagaaaaatgattgttgtgat 294  Q
    |||||||||| ||||| ||||  |||| | ||||||| ||  || || | ||||||| |||||||||| |||||| ||| | | |||| |||||||||||    
T  36438264 gtgaaatttacctaacggtgtcatttggaatgtcactcctacgtcgtaggaaaaggg-aaaacgaatggtttatgtgaaaa-ataaattattgttgtgat 36438361  T
Q  295 tctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaatt 346  Q
    |||||||||||||| | ||| |||||||| | ||||||||||||||||||||    
T  36438362 tctttcaatgaaatggtttttcaaattgactgattaagtgattatacaaatt 36438413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 191 - 340
Target Start/End: Original strand, 41852208 - 41852356
Alignment:
Q  191 agatgtgaaatttatctaacagtgtggtttgcatt-gtcactactctgttgtggaaaaagggtaaaacgaatgatttatgcgaagagaaaaatgattgtt 289  Q
    |||||||||||||||||||| |||| ||||| ||| |||||| ||| ||||||||||| ||| |||| |||| |||||||| || | | |||||| ||||    
T  41852208 agatgtgaaatttatctaacggtgtcgtttgaatttgtcactcctccgttgtggaaaagggg-aaaatgaattatttatgcaaaaa-agaaatgagtgtt 41852305  T
Q  290 gtgattctttcaatgaaatagctttccaaattgagtaattaagtgattata 340  Q
    | |||||||||||||||||| || |  ||||||| | | ||||||||||||    
T  41852306 gcgattctttcaatgaaataactctttaaattgactgagtaagtgattata 41852356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 253 - 346
Target Start/End: Original strand, 44876126 - 44876217
Alignment:
Q  253 aaaacgaatgatttatgcgaagagaaaaatgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaatt 346  Q
    |||||||||| ||||||||  || ||||||||||||||||||||||| ||||||||||||||| ||||||| | ||||| ||||| || |||||    
T  44876126 aaaacgaatggtttatgcg--gaaaaaaatgattgttgtgattcttttaatgaaatagctttctaaattgactgattaaatgattttaaaaatt 44876217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 247 - 348
Target Start/End: Original strand, 18895361 - 18895461
Alignment:
Q  247 aagggtaaaacgaatgatttatgcgaagagaaaaatgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaatt 346  Q
    ||||| |||||||||  |||||||||| || ||| | |||||||||||||||||||||||||| ||||  ||||||| | ||||| ||||||||||||||    
T  18895361 aaggggaaaacgaattgtttatgcgaaaaggaaa-taattgttgtgattctttcaatgaaataactttttaaattgactgattaattgattatacaaatt 18895459  T
Q  347 aa 348  Q
    ||    
T  18895460 aa 18895461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 246 - 346
Target Start/End: Complemental strand, 1366110 - 1366011
Alignment:
Q  246 aaagggtaaaacgaatgatttatgcgaagagaaaaatgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaat 345  Q
    |||||| |||||||||| |||||| ||| | | |||||||||||||||||||||| |||||||| |||| |||||||| | ||||||| ||||||| |||    
T  1366110 aaaggggaaaacgaatggtttatgtgaaaa-agaaatgattgttgtgattctttctatgaaataacttttcaaattgactgattaagtcattataccaat 1366012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 243 - 346
Target Start/End: Complemental strand, 30739227 - 30739125
Alignment:
Q  243 gaaaaagggtaaaacgaatgatttatgcgaagagaaaaatgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattataca 342  Q
    ||||||||| ||||| |||  |||||||||| || ||| |||| ||||||||||||| ||||||||| |||| |||||||| | |||||||||||||| |    
T  30739227 gaaaaaggggaaaactaattgtttatgcgaaaaggaaa-tgatcgttgtgattcttttaatgaaataacttttcaaattgactgattaagtgattataaa 30739129  T
Q  343 aatt 346  Q
    ||||    
T  30739128 aatt 30739125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 279 - 346
Target Start/End: Complemental strand, 41908247 - 41908180
Alignment:
Q  279 aaatgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaatt 346  Q
    ||||||||||||||||||||||||||||| |||||| | |||||| | ||||||||||| ||||||||    
T  41908247 aaatgattgttgtgattctttcaatgaaacagcttttctaattgactgattaagtgattgtacaaatt 41908180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 246 - 346
Target Start/End: Complemental strand, 7366788 - 7366689
Alignment:
Q  246 aaagggtaaaacgaatgatttatgcgaagagaaaaatgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaat 345  Q
    |||||| |||| ||||| |||||||||| | | |||| |||||||||||||||||||| |||||| ||| ||||||||  |||||||| ||||| |||||    
T  7366788 aaaggggaaaatgaatggtttatgcgaaaa-agaaataattgttgtgattctttcaataaaatagtttttcaaattgacaaattaagtaattattcaaat 7366690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 281 - 353
Target Start/End: Original strand, 8358291 - 8358363
Alignment:
Q  281 atgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaattaagggtg 353  Q
    ||||||||||||||||||||||||| ||| ||||  ||||||| | |||||||||||||| |||||| |||||    
T  8358291 atgattgttgtgattctttcaatgagataactttttaaattgactgattaagtgattatataaattaggggtg 8358363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 279 - 346
Target Start/End: Complemental strand, 9479196 - 9479129
Alignment:
Q  279 aaatgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaatt 346  Q
    |||| ||||||||||||||||||| ||||||| |||  ||||||| | ||||||| ||||||||||||    
T  9479196 aaataattgttgtgattctttcaacgaaatagttttttaaattgactgattaagtaattatacaaatt 9479129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 287 - 346
Target Start/End: Original strand, 40737994 - 40738053
Alignment:
Q  287 gttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaatt 346  Q
    ||||||||||||||||| ||||||||||  ||||||| | ||||||| ||||||||||||    
T  40737994 gttgtgattctttcaataaaatagctttttaaattgactgattaagtaattatacaaatt 40738053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 279 - 324
Target Start/End: Complemental strand, 25610135 - 25610090
Alignment:
Q  279 aaatgattgttgtgattctttcaatgaaatagctttccaaattgag 324  Q
    ||||||||||||||||||||||||||||||  |||| |||||||||    
T  25610135 aaatgattgttgtgattctttcaatgaaatgacttttcaaattgag 25610090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 246 - 347
Target Start/End: Original strand, 40841208 - 40841308
Alignment:
Q  246 aaagggtaaaacgaatgatttatgcgaagagaaaaatgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaat 345  Q
    |||||| |||||||||| |||||||||| | | |||||| |||||| ||||||| |||  |||| ||||  ||||||| || |||||| |||||||||||    
T  40841208 aaaggggaaaacgaatggtttatgcgaaaa-agaaatgagtgttgtaattcttttaatagaataactttataaattgattagttaagtaattatacaaat 40841306  T
Q  346 ta 347  Q
    ||    
T  40841307 ta 40841308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 294 - 346
Target Start/End: Complemental strand, 25061957 - 25061905
Alignment:
Q  294 ttctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaatt 346  Q
    ||||||||||||||||||||| |||||| | | || |||||||| ||||||||    
T  25061957 ttctttcaatgaaatagcttttcaaattaactgataaagtgattgtacaaatt 25061905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 100; Significance: 2e-49; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 183 - 353
Target Start/End: Complemental strand, 57853 - 57683
Alignment:
Q  183 taagtaaaagatgtgaaatttatctaacagtgtggtttgcatt-gtcactactctgttgtggaaaaagggtaaaacgaatgatttatgcgaagagaaaaa 281  Q
    ||||| ||||| |||||||||||||||| |||| ||||| ||| |||||| |||| |||||||||| |||||||||||||| |||||||||||| |||||    
T  57853 taagtgaaagaggtgaaatttatctaacggtgtcgtttggatttgtcactcctctattgtggaaaa-gggtaaaacgaatggtttatgcgaagaaaaaaa 57755  T
Q  282 tgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaattaagggtg 353  Q
    |||||||||||||||||| ||||||||||||||| ||||||| | ||||||||||||||||||||| |||||    
T  57754 tgattgttgtgattctttgaatgaaatagctttctaaattgactgattaagtgattatacaaattatgggtg 57683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 183 - 353
Target Start/End: Complemental strand, 2618520 - 2618350
Alignment:
Q  183 taagtaaaagatgtgaaatttatctaacagtgtggtttgcatt-gtcactactctgttgtggaaaaagggtaaaacgaatgatttatgcgaagagaaaaa 281  Q
    ||||| ||||| |||||||||||| ||| |||| ||||| ||| |||||| ||||||||||||||| |||||||||||||| |||||||||||| |||||    
T  2618520 taagtgaaagaggtgaaatttatccaacggtgtcgtttggatttgtcactcctctgttgtggaaaa-gggtaaaacgaatggtttatgcgaagaaaaaaa 2618422  T
Q  282 tgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaattaagggtg 353  Q
    | ||||||||||||||||||||||||||||||| |||||||| | ||||||||||||||||||||| |||||    
T  2618421 taattgttgtgattctttcaatgaaatagcttttcaaattgactgattaagtgattatacaaattaggggtg 2618350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 183 - 353
Target Start/End: Original strand, 3514749 - 3514919
Alignment:
Q  183 taagtaaaagatgtgaaatttatctaacagtgtggtttgcattgt-cactactctgttgtggaaaaagggtaaaacgaatgatttatgcgaagagaaaaa 281  Q
    ||||| ||||| |||||||||||||||  |||| ||||| ||| | |||| ||||||||||||||| |||||||||||||| |||||||||||| |||||    
T  3514749 taagtgaaagaggtgaaatttatctaatggtgtcgtttggatttttcactcctctgttgtggaaaa-gggtaaaacgaatggtttatgcgaagaaaaaaa 3514847  T
Q  282 tgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaattaagggtg 353  Q
    |||||||||||||||||||||||| ||||||||||||||||| | |||| |||||||||||||||| |||||    
T  3514848 tgattgttgtgattctttcaatgatatagctttccaaattgaatgattacgtgattatacaaattaggggtg 3514919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 183 - 347
Target Start/End: Complemental strand, 6754371 - 6754207
Alignment:
Q  183 taagtaaaagatgtgaaatttatctaacagtgtggtttgcatt-gtcactactctgttgtggaaaaagggtaaaacgaatgatttatgcgaagagaaaaa 281  Q
    ||||| ||||| |||||||||||  ||| ||||  |||| ||| |||||| ||||||||||||||| |||||||||||||| |||||||||||| |||||    
T  6754371 taagtgaaagaggtgaaatttattcaacggtgtcatttggatttgtcactcctctgttgtggaaaa-gggtaaaacgaatggtttatgcgaagaaaaaaa 6754273  T
Q  282 tgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaatta 347  Q
    |||||||||||||||||||||||||||||||||||||||||| | ||||||||| |||||||||||    
T  6754272 tgattgttgtgattctttcaatgaaatagctttccaaattgactgattaagtgactatacaaatta 6754207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 183 - 353
Target Start/End: Complemental strand, 6360924 - 6360755
Alignment:
Q  183 taagtaaaagatgtgaaatttatctaacagtgtggtttgcatt-gtcactactctgttgtggaaaaagggtaaaacgaatgatttatgcgaagagaaaaa 281  Q
    ||||| |||||  ||||||||||||||| |||| ||||| ||| |||||| ||||||||||||||| |||||||||||||| ||||| |||||| |||||    
T  6360924 taagtgaaagagatgaaatttatctaacggtgtcgtttgaatttgtcactcctctgttgtggaaaa-gggtaaaacgaatggtttatacgaagaaaaaaa 6360826  T
Q  282 tgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaattaagggtg 353  Q
    ||||||||||||||||||||||| |||| |||| |||||||| | |||||||||||||||||||||||||||    
T  6360825 tgattgttgtgattctttcaatg-aataacttttcaaattgactgattaagtgattatacaaattaagggtg 6360755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 195 - 353
Target Start/End: Original strand, 628007 - 628164
Alignment:
Q  195 gtgaaatttatctaacagtgtggtttgcattg-tcactactctgttgtggaaaaagggtaaaacgaatgatttatgcgaagagaaaaatgattgttgtga 293  Q
    ||||||||||||||||  ||| ||||| |||  ||||| ||||||||||||||| ||  |||||||||| |||||||||||| |||||||||||||||||    
T  628007 gtgaaatttatctaacgatgtcgtttggatttatcacttctctgttgtggaaaaggg--aaaacgaatggtttatgcgaagaaaaaaatgattgttgtga 628104  T
Q  294 ttctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaattaagggtg 353  Q
    ||||||||||||||||||||| |||||||| | ||||||||||||||||||||| |||||    
T  628105 ttctttcaatgaaatagcttttcaaattgactgattaagtgattatacaaattaggggtg 628164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 183 - 353
Target Start/End: Original strand, 12614617 - 12614785
Alignment:
Q  183 taagtaaaagatgtgaaatttatctaacagtgtggtttgcatt-gtcactactctgttgtggaaaaagggtaaaacgaatgatttatgcgaagagaaaaa 281  Q
    ||||| ||||| |||||||||||||||| ||   ||||| ||| || ||| ||||||||||||||| |||||||||| ||| |||||||||||| |||||    
T  12614617 taagtgaaagaggtgaaatttatctaacggtc--gtttgaatttgttactcctctgttgtggaaaa-gggtaaaacggatggtttatgcgaagaaaaaaa 12614713  T
Q  282 tgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaattaagggtg 353  Q
    ||||||||||||||||||||||||||||||||| |||||||| | ||||||||||||||||||||| |||||    
T  12614714 tgattgttgtgattctttcaatgaaatagcttttcaaattgactgattaagtgattatacaaattaggggtg 12614785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 224 - 347
Target Start/End: Complemental strand, 29149526 - 29149404
Alignment:
Q  224 ttgtcactactctgttgtggaaaaagggtaaaacgaatgatttatgcgaagagaaaaatgattgttgtgattctttcaatgaaatagctttccaaattga 323  Q
    |||||||| ||||||||||||||| |||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| || |||||||||||||    
T  29149526 ttgtcactcctctgttgtggaaaa-gggtaaaacgaatggtttatgcgaagaaaaaaatgattgttgtgattctttcaatgaactaactttccaaattga 29149428  T
Q  324 gtaattaagtgattatacaaatta 347  Q
     | |||||||||||||||||||||    
T  29149427 ctgattaagtgattatacaaatta 29149404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 195 - 353
Target Start/End: Original strand, 7525078 - 7525235
Alignment:
Q  195 gtgaaatttatctaacagtgtggtttgcattgtcactactctgttgtggaaaaagggtaaaacgaatgatttatgcgaagagaaaaatgattgttgtgat 294  Q
    |||||||||||||||| ||||  || |  |||||||| ||||||||||||||| ||||||||  |||  |||||||||||| ||||||||||||||||||    
T  7525078 gtgaaatttatctaacggtgtctttggatttgtcactcctctgttgtggaaaa-gggtaaaataaattgtttatgcgaagaaaaaaatgattgttgtgat 7525176  T
Q  295 tctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaattaagggtg 353  Q
    ||||||||| ||||| ||||||||||||| | ||||||||||||||||||||| |||||    
T  7525177 tctttcaataaaataactttccaaattgactgattaagtgattatacaaattatgggtg 7525235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 224 - 352
Target Start/End: Complemental strand, 29401263 - 29401136
Alignment:
Q  224 ttgtcactactctgttgtggaaaaagggtaaaacgaatgatttatgcgaagagaaaaatgattgttgtgattctttcaatgaaatagctttccaaattga 323  Q
    |||||||| |||||| |||||||| |||||| ||||||| |||||||||||| ||||||||||||||||||||||||||||||||| |||| ||||||||    
T  29401263 ttgtcactcctctgtcgtggaaaa-gggtaagacgaatggtttatgcgaagaaaaaaatgattgttgtgattctttcaatgaaataacttttcaaattga 29401165  T
Q  324 gtaattaagtgattatacaaattaagggt 352  Q
     | ||||||||||||||| ||||| ||||    
T  29401164 ctgattaagtgattatactaattaggggt 29401136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 190 - 340
Target Start/End: Complemental strand, 22503901 - 22503751
Alignment:
Q  190 aagatgtgaaatttatctaacagtgtggtttgcatt-gtcactactctgttgtggaaaaagggtaaaacgaatgatttatgcgaagagaaaaatgattgt 288  Q
    |||| |||||||||||||||| ||||  |||| ||| |||||| ||||||||||||||| |||||||| ||||| ||||| |||||| ||||||||||||    
T  22503901 aagaggtgaaatttatctaacggtgtcatttgaatttgtcacttctctgttgtggaaaa-gggtaaaatgaatggtttatacgaagaaaaaaatgattgt 22503803  T
Q  289 tgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattata 340  Q
    | | |||||||||| ||||||| ||| |||||||| | ||||||||||||||    
T  22503802 tttaattctttcaacgaaatagtttttcaaattgactgattaagtgattata 22503751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 279 - 346
Target Start/End: Original strand, 3748563 - 3748630
Alignment:
Q  279 aaatgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaatt 346  Q
    |||| ||||||||||||||||||||||||||||||| |||||||| | ||||||||||||||||||||    
T  3748563 aaataattgttgtgattctttcaatgaaatagcttttcaaattgattgattaagtgattatacaaatt 3748630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 282 - 346
Target Start/End: Complemental strand, 31861067 - 31861003
Alignment:
Q  282 tgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaatt 346  Q
    ||||||||||||||||||||||||||||||||| |||||||| | ||||||| ||||||||||||    
T  31861067 tgattgttgtgattctttcaatgaaatagcttttcaaattgactgattaagtaattatacaaatt 31861003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 279 - 346
Target Start/End: Original strand, 30915361 - 30915428
Alignment:
Q  279 aaatgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaatt 346  Q
    ||||||||||||||||||||||||| |||||||||| |||||||| | ||||||| ||||||||||||    
T  30915361 aaatgattgttgtgattctttcaattaaatagcttttcaaattgactgattaagtaattatacaaatt 30915428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 195 - 323
Target Start/End: Complemental strand, 6294405 - 6294279
Alignment:
Q  195 gtgaaatttatctaacagtgtggtttgcattgtcactactctgttgtggaaaaagggtaaaacgaatgatttatgcgaagagaaaaatgattgttgtgat 294  Q
    |||||||||| ||||| |||| ||||| | ||||||| ||  || |||| ||| ||| |||||||||  |||||||||| | | ||||||||||||||||    
T  6294405 gtgaaatttacctaacggtgtcgtttggaatgtcactcctacgtcgtgggaaagggg-aaaacgaatagtttatgcgaaaa-agaaatgattgttgtgat 6294308  T
Q  295 tctttcaatgaaatagctttccaaattga 323  Q
    |||||||||||||| ||||| ||||||||    
T  6294307 tctttcaatgaaattgcttttcaaattga 6294279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 246 - 346
Target Start/End: Original strand, 29308430 - 29308529
Alignment:
Q  246 aaagggtaaaacgaatgatttatgcgaagagaaaaatgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaat 345  Q
    |||||| ||||||||||||||||| ||| | | |||||||||||||||||  ||||||||||||| ||| |||||||| | ||||||| ||||||| |||    
T  29308430 aaaggggaaaacgaatgatttatgtgaaaa-agaaatgattgttgtgattacttcaatgaaatagtttttcaaattgactgattaagtcattataccaat 29308528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 279 - 346
Target Start/End: Original strand, 1690628 - 1690695
Alignment:
Q  279 aaatgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaatt 346  Q
    |||||||||||||||||||||||||||||||  ||| |||||||| | || |||||||||||||||||    
T  1690628 aaatgattgttgtgattctttcaatgaaataaattttcaaattgattgatcaagtgattatacaaatt 1690695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 253 - 346
Target Start/End: Complemental strand, 21946201 - 21946109
Alignment:
Q  253 aaaacgaatgatttatgcgaagagaaaaatgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaatt 346  Q
    |||||||||  |||||||||| | | |||| |||||| || ||||||||||||||||||||| ||||| || | ||||||||||||||||||||    
T  21946201 aaaacgaattgtttatgcgaaaa-agaaataattgttatggttctttcaatgaaatagcttttcaaatagactgattaagtgattatacaaatt 21946109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 279 - 346
Target Start/End: Original strand, 14893412 - 14893479
Alignment:
Q  279 aaatgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaatt 346  Q
    ||||||||||||||||||||| || ||||||| ||| |||||||| | ||||||| ||||||||||||    
T  14893412 aaatgattgttgtgattcttttaacgaaatagtttttcaaattgactgattaagtaattatacaaatt 14893479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 246 - 346
Target Start/End: Original strand, 1093004 - 1093102
Alignment:
Q  246 aaagggtaaaacgaatgatttatgcgaagagaaaaatgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaat 345  Q
    |||||| |||||||||| |||||| ||| | | |||||||||||||||||||||| |||||||||||||  ||||||| | ||| ||| ||||||| |||    
T  1093004 aaaggggaaaacgaatggtttatgtgaaaa-agaaatgattgttgtgattctttc-atgaaatagctttttaaattgactgatttagtcattataccaat 1093101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 279 - 346
Target Start/End: Complemental strand, 19231681 - 19231615
Alignment:
Q  279 aaatgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaatt 346  Q
    ||||||||||||||||| ||||||||  |||||||| |||||||| | ||||||||| ||||||||||    
T  19231681 aaatgattgttgtgattttttcaatgtcatagcttttcaaattgattgattaagtga-tatacaaatt 19231615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 183 - 247
Target Start/End: Original strand, 31258471 - 31258536
Alignment:
Q  183 taagtaaaagatgtgaaatttatctaacagtgtggtttgca-ttgtcactactctgttgtggaaaa 247  Q
    ||||| ||||| |||||||||||||||| |||| ||||| | |||||||| |||||||||||||||    
T  31258471 taagtgaaagaggtgaaatttatctaacggtgttgtttggatttgtcactcctctgttgtggaaaa 31258536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 279 - 346
Target Start/End: Complemental strand, 350484 - 350416
Alignment:
Q  279 aaatgattgttgtgattctttcaat-gaaatagctttccaaattgagtaattaagtgattatacaaatt 346  Q
    |||||||||||||||||||||  || |||||||||||| ||||||| | ||| |||||||||| |||||    
T  350484 aaatgattgttgtgattctttttattgaaatagctttcgaaattgactgattgagtgattatataaatt 350416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 303 - 346
Target Start/End: Complemental strand, 31234956 - 31234913
Alignment:
Q  303 tgaaatagctttccaaattgagtaattaagtgattatacaaatt 346  Q
    |||||||||||| |||||||| | ||||||||||||||||||||    
T  31234956 tgaaatagcttttcaaattgattgattaagtgattatacaaatt 31234913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 96; Significance: 5e-47; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 183 - 353
Target Start/End: Complemental strand, 16875 - 16705
Alignment:
Q  183 taagtaaaagatgtgaaatttatctaacagtgtggtttgcatt-gtcactactctgttgtggaaaaagggtaaaacgaatgatttatgcgaagagaaaaa 281  Q
    ||||| ||||| |||||||||||||||| |||| ||||| ||| || ||| ||||||||||||||| |||||||||||||| |||||||||||| ||| |    
T  16875 taagtgaaagaggtgaaatttatctaacggtgtcgtttggatttgttactcctctgttgtggaaaa-gggtaaaacgaatggtttatgcgaagaaaaata 16777  T
Q  282 tgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaattaagggtg 353  Q
    |||| |||||||||||||||||||||||||||| |||||||| | ||||||||||||||||||||| |||||    
T  16776 tgatcgttgtgattctttcaatgaaatagcttttcaaattgactgattaagtgattatacaaattaggggtg 16705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0181 (Bit Score: 94; Significance: 8e-46; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 183 - 355
Target Start/End: Original strand, 17031 - 17203
Alignment:
Q  183 taagtaaaagatgtgaaatttatctaacagtgtggtttgcatt-gtcactactctgttgtggaaaaagggtaaaacgaatgatttatgcgaagagaaaaa 281  Q
    ||||| ||||| |||||||||||| ||| |||| ||||| ||| |||||| || |||||||||||| || ||||||||||| ||||||||||||  ||||    
T  17031 taagtgaaagaggtgaaatttatccaacggtgtcgtttgaatttgtcacttctttgttgtggaaaatgg-taaaacgaatggtttatgcgaagaagaaaa 17129  T
Q  282 tgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaattaagggtgat 355  Q
    ||||||||||||||||||||| |||||||||||||||||||| | ||||||||||||||||||||| |||||||    
T  17130 tgattgttgtgattctttcaacgaaatagctttccaaattgactgattaagtgattatacaaattaggggtgat 17203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0564 (Bit Score: 88; Significance: 3e-42; HSPs: 1)
Name: scaffold0564
Description:

Target: scaffold0564; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 189 - 323
Target Start/End: Complemental strand, 1220 - 1086
Alignment:
Q  189 aaagatgtgaaatttatctaacagtgtggtttgcatt-gtcactactctgttgtggaaaaagggtaaaacgaatgatttatgcgaagagaaaaatgattg 287  Q
    ||||| |||||||||||||||| |||| ||||| ||| |||||| || |||||||||||| |||||||||||||| |||||||||||| |||||||||||    
T  1220 aaagaggtgaaatttatctaacggtgtcgtttggatttgtcactcctatgttgtggaaaa-gggtaaaacgaatggtttatgcgaagaaaaaaatgattg 1122  T
Q  288 ttgtgattctttcaatgaaatagctttccaaattga 323  Q
    ||||||||||||||||||||||||||||||||||||    
T  1121 ttgtgattctttcaatgaaatagctttccaaattga 1086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 183 - 323
Target Start/End: Original strand, 22704 - 22844
Alignment:
Q  183 taagtaaaagatgtgaaatttatctaacagtgtggtttgcatt-gtcactactctgttgtggaaaaagggtaaaacgaatgatttatgcgaagagaaaaa 281  Q
    ||||| ||||| |||||||||||||||| |||| ||||| ||| |||||| || |||||||||||| |||||||||||||| |||||||||||| |||||    
T  22704 taagtgaaagaggtgaaatttatctaacggtgtcgtttgaatttgtcactcctatgttgtggaaaa-gggtaaaacgaatggtttatgcgaagaaaaaaa 22802  T
Q  282 tgattgttgtgattctttcaatgaaatagctttccaaattga 323  Q
    | ||| ||||||||||||||||||||||| ||| || |||||    
T  22803 taattattgtgattctttcaatgaaatagtttttcatattga 22844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 64; Significance: 7e-28; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 195 - 353
Target Start/End: Original strand, 46086 - 46242
Alignment:
Q  195 gtgaaatttatctaacagtgtggtttgcatt-gtcactactctgttgtggaaaaagggtaaaacgaatgatttatgcgaagagaaaaatgattgttgtga 293  Q
    |||||||||| | ||| |||| ||||| ||| |||||| |||| ||||| |||||| |||||||||||| |||||| ||||| |||||||||||||||||    
T  46086 gtgaaatttagccaacggtgtcgtttggatttgtcactcctct-ttgtg-aaaaagagtaaaacgaatggtttatgtgaaga-aaaaatgattgttgtga 46182  T
Q  294 ttctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaattaagggtg 353  Q
    || ||||||||||||||  ||||||||||| | ||||||||||||| ||||||| |||||    
T  46183 ttatttcaatgaaatagacttccaaattgactgattaagtgattatccaaattatgggtg 46242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0606 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0606
Description:

Target: scaffold0606; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 277 - 353
Target Start/End: Original strand, 8388 - 8464
Alignment:
Q  277 aaaaatgattgttgtgattctttcaatgaaatagctttccaaattgagtaattaagtgattatacaaattaagggtg 353  Q
    |||||| ||| ||||||||||||||||||||||| |||| ||||||| | ||||| ||||||||||||||| |||||    
T  8388 aaaaataatttttgtgattctttcaatgaaatagttttcgaaattgactgattaattgattatacaaattatgggtg 8464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University