View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15996_high_8 (Length: 282)

Name: NF15996_high_8
Description: NF15996
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15996_high_8
NF15996_high_8
[»] chr2 (1 HSPs)
chr2 (1-282)||(37135779-37136060)


Alignment Details
Target: chr2 (Bit Score: 274; Significance: 1e-153; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 1 - 282
Target Start/End: Original strand, 37135779 - 37136060
Alignment:
Q  1 tggttttataacaatccaatatgcagaacctgtagcatgaaacaaggggaaaggaaggaaacttcatttacgtttctgttattccaactttattcaatcg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37135779 tggttttataacaatccaatatgcagaacctgtagcatgaaacaaggggaaaggaaggaaacttcatttacgtttctgttattccaactttattcaatcg 37135878  T
Q  101 tataaaagttaaaatattaaagattgtatactttttgttgttataaacataaagagagaaagttgtgttttcaattttaccttttgagcatcaattgagt 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  37135879 tataaaagttaaaatattaaagattgtatactttttgttgttataaacataaagagagaaagttgtgttttcaattttaccctttgagcatcaattgagt 37135978  T
Q  201 ttcttatcgctctaacatttttaataaataattttgtacctagtgaatttatgataaccatcatcaagaagctgacctcaat 282  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37135979 ttcttttcgctctaacatttttaataaataattttgtacctagtgaatttatgataaccatcatcaagaagctgacctcaat 37136060  T

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