View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15997_low_11 (Length: 262)

Name: NF15997_low_11
Description: NF15997
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15997_low_11
NF15997_low_11
[»] chr8 (20 HSPs)
chr8 (1-201)||(6362055-6362255)
chr8 (1-205)||(6409061-6409265)
chr8 (16-204)||(6423102-6423290)
chr8 (7-204)||(7457917-7458114)
chr8 (1-201)||(6351170-6351370)
chr8 (7-204)||(7470319-7470516)
chr8 (16-204)||(6330737-6330925)
chr8 (1-147)||(6389812-6389958)
chr8 (5-195)||(6273385-6273575)
chr8 (38-204)||(6320297-6320463)
chr8 (19-195)||(6287650-6287826)
chr8 (20-147)||(6368849-6368976)
chr8 (191-257)||(6363250-6363316)
chr8 (191-256)||(6352312-6352377)
chr8 (62-162)||(6262233-6262333)
chr8 (40-122)||(6456125-6456207)
chr8 (41-120)||(6449659-6449738)
chr8 (209-254)||(6424158-6424203)
chr8 (191-253)||(7459150-7459212)
chr8 (191-256)||(6331959-6332024)
[»] chr2 (2 HSPs)
chr2 (77-176)||(42692174-42692273)
chr2 (71-140)||(42689611-42689680)
[»] chr5 (1 HSPs)
chr5 (56-122)||(9606276-9606342)
[»] chr1 (1 HSPs)
chr1 (62-165)||(36926312-36926415)
[»] chr7 (2 HSPs)
chr7 (66-120)||(46708215-46708269)
chr7 (71-120)||(46709185-46709234)


Alignment Details
Target: chr8 (Bit Score: 193; Significance: 1e-105; HSPs: 20)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 6362055 - 6362255
Alignment:
Q  1 ctcaggggatccctgctcaggcatgaatcttctgcttttagttggtcggttaacgatatatcctccatacggatattgtccaaaattaactgctgcatga 100  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6362055 ctcaggggatccctgctcaggcatgaatcttctacttttagttggtcggttaacgatatatcctccatacggatattgtccaaaattaactgctgcatga 6362154  T
Q  101 agtgctgaagcaatccatatgagggtggtgcaagcttcaatcaactcctcacgagtttgcatcttaaaccaccatgtagcattcttcaagtcaccacgac 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  6362155 agtgctgaagcaatccatatgagggtggtgcaagcttcaatcaactcctcacgagtttgcatcttaaaccaccatgtagcattcttcaagtcaccatgac 6362254  T
Q  201 c 201  Q
    |    
T  6362255 c 6362255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 6409061 - 6409265
Alignment:
Q  1 ctcaggggatccctgctcaggcatgaatcttctgcttttagttggtcggttaacgatatatcctccatacggatattgtccaaaattaactgctgcatga 100  Q
    |||||||| ||| | |||||||||||||||||| |||||||||||||||||||| || ||||| || || |||||||||||||||||||| |||||||||    
T  6409061 ctcaggggttcctttctcaggcatgaatcttctacttttagttggtcggttaacaatgtatccaccgtaaggatattgtccaaaattaacagctgcatga 6409160  T
Q  101 agtgctgaagcaatccatatgagggtggtgcaagcttcaatcaactcctcacgagtttgcatcttaaaccaccatgtagcattcttcaagtcaccacgac 200  Q
    ||||||||||| ||||| |||||||||||||||| ||||||||||||  ||||||||| |||||||||||||||||| |||| ||||||||||||| | |    
T  6409161 agtgctgaagccatccaaatgagggtggtgcaagtttcaatcaactctgcacgagttttcatcttaaaccaccatgttgcatccttcaagtcaccatggc 6409260  T
Q  201 ccact 205  Q
    |||||    
T  6409261 ccact 6409265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 16 - 204
Target Start/End: Original strand, 6423102 - 6423290
Alignment:
Q  16 ctcaggcatgaatcttctgcttttagttggtcggttaacgatatatcctccatacggatattgtccaaaattaactgctgcatgaagtgctgaagcaatc 115  Q
    ||||||||||||||| ||||| |||||||||||||||| ||| ||||||||||| || ||||||||||||||||| ||||||||||||||||||||||||    
T  6423102 ctcaggcatgaatctcctgctcttagttggtcggttaaggatgtatcctccatatgggtattgtccaaaattaacagctgcatgaagtgctgaagcaatc 6423201  T
Q  116 catatgagggtggtgcaagcttcaatcaactcctcacgagtttgcatcttaaaccaccatgtagcattcttcaagtcaccacgacccac 204  Q
    ||||| ||| ||||| ||||||| ||||||||| |||||||||||||||||||||||||||| ||| |||| ||||||||| |||||||    
T  6423202 catataaggatggtggaagcttcgatcaactccgcacgagtttgcatcttaaaccaccatgtggcactctttaagtcaccatgacccac 6423290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 7 - 204
Target Start/End: Original strand, 7457917 - 7458114
Alignment:
Q  7 ggatccctgctcaggcatgaatcttctgcttttagttggtcggttaacgatatatcctccatacggatattgtccaaaattaactgctgcatgaagtgct 106  Q
    |||||| | |||||||||||||||||| ||||| ||||||||||||| ||||||||||||||||| |||||||||||||||||| |||||||||||||||    
T  7457917 ggatcctttctcaggcatgaatcttctactttttgttggtcggttaaggatatatcctccatacgcatattgtccaaaattaacagctgcatgaagtgct 7458016  T
Q  107 gaagcaatccatatgagggtggtgcaagcttcaatcaactcctcacgagtttgcatcttaaaccaccatgtagcattcttcaagtcaccacgacccac 204  Q
    |||||||||||||||||  |||||||||||||  ||||||||  |||  |||||||||||||||||||||| |||||| | ||||||||| |||||||    
T  7458017 gaagcaatccatatgagaatggtgcaagcttctttcaactccgtacggttttgcatcttaaaccaccatgttgcattcctaaagtcaccatgacccac 7458114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 6351170 - 6351370
Alignment:
Q  1 ctcaggggatccctgctcaggcatgaatcttctgcttttagttggtcggttaacgatatatcctccatacggatattgtccaaaattaactgctgcatga 100  Q
    |||||| ||||| | |||||||||||||||||| || || ||||| ||||||| ||||||||||||||| ||||||||||| |||||||| |||||||||    
T  6351170 ctcaggtgatcctttctcaggcatgaatcttctactctttgttggccggttaaggatatatcctccatatggatattgtccgaaattaacagctgcatga 6351269  T
Q  101 agtgctgaagcaatccatatgagggtggtgcaagcttcaatcaactcctcacgagtttgcatcttaaaccaccatgtagcattcttcaagtcaccacgac 200  Q
    |||||||||||||||||||| ||| ||||| ||||||| |||||||| ||||| ||||||||||||||||||||||| |||||||||| ||||||| |||    
T  6351270 agtgctgaagcaatccatataaggatggtggaagcttcgatcaactcttcacgggtttgcatcttaaaccaccatgtggcattcttcaggtcaccatgac 6351369  T
Q  201 c 201  Q
    |    
T  6351370 c 6351370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 7 - 204
Target Start/End: Original strand, 7470319 - 7470516
Alignment:
Q  7 ggatccctgctcaggcatgaatcttctgcttttagttggtcggttaacgatatatcctccatacggatattgtccaaaattaactgctgcatgaagtgct 106  Q
    |||||| | |||||||||||||||||| ||||| ||||||||||||| ||||||||||||||||| |||||||||||||||||| |||||||||||||||    
T  7470319 ggatcctttctcaggcatgaatcttctactttttgttggtcggttaaggatatatcctccatacgcatattgtccaaaattaacagctgcatgaagtgct 7470418  T
Q  107 gaagcaatccatatgagggtggtgcaagcttcaatcaactcctcacgagtttgcatcttaaaccaccatgtagcattcttcaagtcaccacgacccac 204  Q
    |||||||||||||||||  |||||||||||||  ||||||||  |||  || ||||||||||||||||||| |||||| | ||||||||| |||||||    
T  7470419 gaagcaatccatatgagaatggtgcaagcttctttcaactccgtacggtttggcatcttaaaccaccatgttgcattcctaaagtcaccatgacccac 7470516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 16 - 204
Target Start/End: Original strand, 6330737 - 6330925
Alignment:
Q  16 ctcaggcatgaatcttctgcttttagttggtcggttaacgatatatcctccatacggatattgtccaaaattaactgctgcatgaagtgctgaagcaatc 115  Q
    ||||||||||  ||| | ||||||||||||||||||||  |||||||||||||| |||||||| ||||||||||| ||||||||| ||||||||||||||    
T  6330737 ctcaggcatgtgtctccggcttttagttggtcggttaagtatatatcctccatatggatattgaccaaaattaacagctgcatgatgtgctgaagcaatc 6330836  T
Q  116 catatgagggtggtgcaagcttcaatcaactcctcacgagtttgcatcttaaaccaccatgtagcattcttcaagtcaccacgacccac 204  Q
    ||||||||| | ||||||||||||||||||||   || |||||||||||||||||||||||||||||||||||| |||||| |||||||    
T  6330837 catatgaggatagtgcaagcttcaatcaactctgtacaagtttgcatcttaaaccaccatgtagcattcttcaaatcaccatgacccac 6330925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 6389812 - 6389958
Alignment:
Q  1 ctcaggggatccctgctcaggcatgaatcttctgcttttagttggtcggttaacgatatatcctccatacggatattgtccaaaattaactgctgcatga 100  Q
    |||||||| ||| | ||||||||||||||||||||||||||||||||||||||| || ||||| || ||||||||||||||||||||||| |||||||||    
T  6389812 ctcaggggttcctttctcaggcatgaatcttctgcttttagttggtcggttaacaatgtatccaccgtacggatattgtccaaaattaacagctgcatga 6389911  T
Q  101 agtgctgaagcaatccatatgagggtggtgcaagcttcaatcaactc 147  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||    
T  6389912 agtgctgaagcaatccatatgagggtggtgcaagtttcaatcaactc 6389958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 5 - 195
Target Start/End: Original strand, 6273385 - 6273575
Alignment:
Q  5 ggggatccctgctcaggcatgaatcttctgcttttagttggtcggttaacgatatatcctccatacggatattgtccaaaattaactgctgcatgaagtg 104  Q
    |||||||| | || |||||| ||||||||||||||||||||||||||||  || || || || ||||||||||||||||||||||| |||||||||||||    
T  6273385 ggggatcctttcttaggcattaatcttctgcttttagttggtcggttaagaatgtaaccaccgtacggatattgtccaaaattaacagctgcatgaagtg 6273484  T
Q  105 ctgaagcaatccatatgagggtggtgcaagcttcaatcaactcctcacgagtttgcatcttaaaccaccatgtagcattcttcaagtcacc 195  Q
    |||||||||||||||||||||| |||||||  |||||||||||    |||||||||||||||| ||||||| ||||||| |||||||||||    
T  6273485 ctgaagcaatccatatgagggtagtgcaagagtcaatcaactctgtgcgagtttgcatcttaacccaccatttagcatttttcaagtcacc 6273575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 38 - 204
Target Start/End: Original strand, 6320297 - 6320463
Alignment:
Q  38 ttagttggtcggttaacgatatatcctccatacggatattgtccaaaattaactgctgcatgaagtgctgaagcaatccatatgagggtggtgcaagctt 137  Q
    ||||||||||||||||  |||||||||||||| || ||||| ||||||||||| ||||||||| ||||||||||||||||||||||| | ||||||||||    
T  6320297 ttagttggtcggttaagtatatatcctccatatgggtattgaccaaaattaacagctgcatgatgtgctgaagcaatccatatgaggatagtgcaagctt 6320396  T
Q  138 caatcaactcctcacgagtttgcatcttaaaccaccatgtagcattcttcaagtcaccacgacccac 204  Q
    ||||||||||   || |||||||||||||||||||||||||||||||||||| |||||| |||||||    
T  6320397 caatcaactctgtacaagtttgcatcttaaaccaccatgtagcattcttcaaatcaccatgacccac 6320463  T

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Target: chr8; HSP #11
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 19 - 195
Target Start/End: Original strand, 6287650 - 6287826
Alignment:
Q  19 aggcatgaatcttctgcttttagttggtcggttaacgatatatcctccatacggatattgtccaaaattaactgctgcatgaagtgctgaagcaatccat 118  Q
    |||||| |||||||||||||| |||||||||||||  || || || || ||||||||||||||||||||||| || ||||||||||| ||||||||||||    
T  6287650 aggcattaatcttctgctttttgttggtcggttaagaatgtaaccaccgtacggatattgtccaaaattaacagccgcatgaagtgccgaagcaatccat 6287749  T
Q  119 atgagggtggtgcaagcttcaatcaactcctcacgagtttgcatcttaaaccaccatgtagcattcttcaagtcacc 195  Q
    |||||| |||||||||| ||||||||||||| ||| ||||||||||||||||||||| ||||||  |||||||||||    
T  6287750 atgaggatggtgcaagcctcaatcaactccttacgggtttgcatcttaaaccaccatttagcatctttcaagtcacc 6287826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 20 - 147
Target Start/End: Original strand, 6368849 - 6368976
Alignment:
Q  20 ggcatgaatcttctgcttttagttggtcggttaacgatatatcctccatacggatattgtccaaaattaactgctgcatgaagtgctgaagcaatccata 119  Q
    |||||||||||| || |||||||||||||||||| ||| || ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  6368849 ggcatgaatcttatggttttagttggtcggttaaggatgtaccctccatactgatattgtccaaaattaacagctgcatgaagtgctgaagcaatccata 6368948  T
Q  120 tgagggtggtgcaagcttcaatcaactc 147  Q
    ||||||||||||||| ||||||||||||    
T  6368949 tgagggtggtgcaagtttcaatcaactc 6368976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 191 - 257
Target Start/End: Complemental strand, 6363316 - 6363250
Alignment:
Q  191 tcaccacgacccactctttccatatttgaggaaaataaatgcaaccgagactaaggcctatgctact 257  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6363316 tcaccacgacccactctttccatatttgaggaaaataaatgcaaccgagactaaggcctatgctact 6363250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 191 - 256
Target Start/End: Complemental strand, 6352377 - 6352312
Alignment:
Q  191 tcaccacgacccactctttccatatttgaggaaaataaatgcaaccgagactaaggcctatgctac 256  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  6352377 tcaccacgacccactctttccatatttgaggaaaataaatgcaaccgagacaaaggcctatgctac 6352312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 62 - 162
Target Start/End: Original strand, 6262233 - 6262333
Alignment:
Q  62 cctccatacggatattgtccaaaattaactgctgcatgaagtgctgaagcaatccatatgagggtggtgcaagcttcaatcaactcctcacgagtttgca 161  Q
    ||||||||||||||||||||||||||||| ||||||||||| ||||||||| |||||||||   |  ||||| ||| ||||||||| || ||||||||||    
T  6262233 cctccatacggatattgtccaaaattaacagctgcatgaagagctgaagcagtccatatgataatactgcaaacttgaatcaactcttcgcgagtttgca 6262332  T
Q  162 t 162  Q
    |    
T  6262333 t 6262333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 40 - 122
Target Start/End: Original strand, 6456125 - 6456207
Alignment:
Q  40 agttggtcggttaacgatatatcctccatacggatattgtccaaaattaactgctgcatgaagtgctgaagcaatccatatga 122  Q
    |||||| ||||| | ||||||||||||||| ||||| |||||||| ||||||||||||||||| ||||||||| |||||||||    
T  6456125 agttggacggttcaggatatatcctccataaggatactgtccaaagttaactgctgcatgaagagctgaagcagtccatatga 6456207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 41 - 120
Target Start/End: Original strand, 6449659 - 6449738
Alignment:
Q  41 gttggtcggttaacgatatatcctccatacggatattgtccaaaattaactgctgcatgaagtgctgaagcaatccatat 120  Q
    ||||| ||||| | |||||||||||| || ||||||||||| |||||||| ||||||||||| || |||||| |||||||    
T  6449659 gttggacggttcaggatatatcctccgtaaggatattgtccgaaattaacagctgcatgaagagcagaagcagtccatat 6449738  T

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Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 209 - 254
Target Start/End: Complemental strand, 6424203 - 6424158
Alignment:
Q  209 tccatatttgaggaaaataaatgcaaccgagactaaggcctatgct 254  Q
    ||||||||||||||||||||||||||| ||||| ||||||||||||    
T  6424203 tccatatttgaggaaaataaatgcaactgagacaaaggcctatgct 6424158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 253
Target Start/End: Complemental strand, 7459212 - 7459150
Alignment:
Q  191 tcaccacgacccactctttccatatttgaggaaaataaatgcaaccgagactaaggcctatgc 253  Q
    ||||||||| | |||  ||||||||||||||| |||||||||||| ||||| ||| |||||||    
T  7459212 tcaccacgatctactaattccatatttgaggagaataaatgcaactgagacaaagtcctatgc 7459150  T

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Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 191 - 256
Target Start/End: Complemental strand, 6332024 - 6331959
Alignment:
Q  191 tcaccacgacccactctttccatatttgaggaaaataaatgcaaccgagactaaggcctatgctac 256  Q
    |||||| |||||| | |||||||||||||||||||||||  |||| || || ||||| ||||||||    
T  6332024 tcaccatgacccaatatttccatatttgaggaaaataaactcaactgatacaaaggcatatgctac 6331959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 44; Significance: 4e-16; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 77 - 176
Target Start/End: Original strand, 42692174 - 42692273
Alignment:
Q  77 tgtccaaaattaactgctgcatgaagtgctgaagcaatccatatgagggtggtgcaagcttcaatcaactcctcacgagtttgcatcttaaaccaccatg 176  Q
    |||||||||||||| ||||||||||| |||||||||||||||||||  || |||||| |||| |  | ||| ||||||| ||||||||||  ||||||||    
T  42692174 tgtccaaaattaacagctgcatgaagagctgaagcaatccatatgacagtagtgcaaacttcgactagctcttcacgagcttgcatcttaggccaccatg 42692273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 71 - 140
Target Start/End: Complemental strand, 42689680 - 42689611
Alignment:
Q  71 ggatattgtccaaaattaactgctgcatgaagtgctgaagcaatccatatgagggtggtgcaagcttcaa 140  Q
    |||||||||||||||||||| ||||| || || ||||||||  ||||||||| | | |||||||||||||    
T  42689680 ggatattgtccaaaattaacagctgcgtggagggctgaagccgtccatatgatgatagtgcaagcttcaa 42689611  T

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Target: chr5 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 56 - 122
Target Start/End: Complemental strand, 9606342 - 9606276
Alignment:
Q  56 atatatcctccatacggatattgtccaaaattaactgctgcatgaagtgctgaagcaatccatatga 122  Q
    ||||| |||||||| |||||||||||||||||||| ||||||||||| || |||||| |||||||||    
T  9606342 atataacctccataaggatattgtccaaaattaacagctgcatgaagagcagaagcagtccatatga 9606276  T

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Target: chr1 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 62 - 165
Target Start/End: Complemental strand, 36926415 - 36926312
Alignment:
Q  62 cctccatacggatattgtccaaaattaactgctgcatgaagtgctgaagcaatccatatgagggtggtgcaagcttcaatcaactcctcacgagtttgca 161  Q
    |||||||| ||||| |||||||| || ||||| ||||| || ||||||||||||||||| |   | ||||||| |||||||| ||| ||  |||| ||||    
T  36926415 cctccatatggatactgtccaaagttgactgcagcatggagagctgaagcaatccatataataatagtgcaagtttcaatcagctcttcgagagtatgca 36926316  T
Q  162 tctt 165  Q
    ||||    
T  36926315 tctt 36926312  T

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Target: chr7 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 120
Target Start/End: Original strand, 46708215 - 46708269
Alignment:
Q  66 catacggatattgtccaaaattaactgctgcatgaagtgctgaagcaatccatat 120  Q
    |||| |||||||||||||| || || |||||||| || |||||||||||||||||    
T  46708215 cataaggatattgtccaaattttacagctgcatgtagggctgaagcaatccatat 46708269  T

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Target: chr7; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 71 - 120
Target Start/End: Original strand, 46709185 - 46709234
Alignment:
Q  71 ggatattgtccaaaattaactgctgcatgaagtgctgaagcaatccatat 120  Q
    |||||||||||||| || || |||||||| || |||||||||||||||||    
T  46709185 ggatattgtccaaagtttacagctgcatgtagagctgaagcaatccatat 46709234  T

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