View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15997_low_14 (Length: 204)
Name: NF15997_low_14
Description: NF15997
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15997_low_14 |
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Alignment Details
Target: chr3 (Bit Score: 187; Significance: 1e-101; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 34899924 - 34899738
Alignment:
| Q |
1 |
acatctctctttagttcttctctcgctatttgatgtcaacaaaagctaaattgtgtcttcccctgcgtgtatgcaaccttatagtctcaaaattttcctt |
100 |
Q |
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| T |
34899924 |
acatctctctttagttcttctctcgctatttgatgtcaacaaaagctaaattgtgtcttcccctgcgtgtatgcaaccttatagtctcaaaattttcctt |
34899825 |
T |
|
| Q |
101 |
ccattctcaccaaacatgaaaggtatgtatcttccaactacaaaattttatgtgaatttgtgcagatgatatcactgacaatatgat |
187 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34899824 |
ccattctcaccaaacatgaaaggtatgtatcttccaactacaaaattttatgtgaatttgtgcagatgatatcactgacaatatgat |
34899738 |
T |
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