View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15999_low_25 (Length: 328)
Name: NF15999_low_25
Description: NF15999
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15999_low_25 |
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Alignment Details
Target: chr7 (Bit Score: 250; Significance: 1e-139; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 250; E-Value: 1e-139
Query Start/End: Original strand, 18 - 312
Target Start/End: Original strand, 44730212 - 44730522
Alignment:
| Q |
18 |
gatcaaattcttgaactgaaccatcatagtaaatgattttggttgtggcatgaaatgagatatggtttcccataagaggatattgttatgagtcaataca |
117 |
Q |
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| T |
44730212 |
gatcaaattcttgaactgaaccatcatagtaaatgattttggttgtggcatgaaatgagatatggtttcccataagaggatattgttatgagccaataca |
44730311 |
T |
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| Q |
118 |
aggtgttgatgt----------------aaaacaaggtaatgtatgcaatgagaagtgatgtttgttaaaccgctccatcttgtgaagaatataatggtg |
201 |
Q |
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|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44730312 |
aggtgttgatgtgagacaaaaggtgtgtaaaacaaggtaatgtatgcaatgagaagtgatgtttgttaaaccgctccatcttgtgaagaatataatggtg |
44730411 |
T |
|
| Q |
202 |
gacttggtagttttgatttggctcggttgttggctatgacatgagttacaactacgacaagtacactacttaaccaatttttgactttataattggatca |
301 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44730412 |
gacttggtagttttgatttggctcggttgttggctatgacatgagttacaactacaacaagtacactacttaaccaatttttgactttataattggatca |
44730511 |
T |
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| Q |
302 |
gtatccttcat |
312 |
Q |
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||||||||||| |
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| T |
44730512 |
gtatccttcat |
44730522 |
T |
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