View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15999_low_43 (Length: 217)

Name: NF15999_low_43
Description: NF15999
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15999_low_43
NF15999_low_43
[»] chr6 (36 HSPs)
chr6 (1-202)||(21354873-21355074)
chr6 (45-136)||(7223779-7223870)
chr6 (105-202)||(23897944-23898041)
chr6 (105-202)||(15528009-15528106)
chr6 (105-202)||(17103328-17103425)
chr6 (105-202)||(26053195-26053292)
chr6 (105-202)||(26073248-26073345)
chr6 (45-136)||(19748597-19748688)
chr6 (49-136)||(27614434-27614521)
chr6 (43-136)||(11327334-11327427)
chr6 (41-136)||(17543500-17543595)
chr6 (45-136)||(22498214-22498305)
chr6 (105-206)||(7918249-7918348)
chr6 (42-136)||(17103459-17103553)
chr6 (46-125)||(3573674-3573754)
chr6 (44-136)||(7918123-7918215)
chr6 (49-136)||(26053074-26053161)
chr6 (49-136)||(26073127-26073214)
chr6 (105-202)||(19748466-19748563)
chr6 (43-136)||(15527882-15527975)
chr6 (46-135)||(30912181-30912270)
chr6 (44-136)||(23898074-23898166)
chr6 (147-202)||(17543681-17543736)
chr6 (45-136)||(27233073-27233164)
chr6 (51-124)||(31108431-31108504)
chr6 (105-202)||(7223645-7223745)
chr6 (105-178)||(27233198-27233271)
chr6 (87-187)||(27890521-27890621)
chr6 (147-202)||(30912353-30912408)
chr6 (45-123)||(17250335-17250412)
chr6 (49-135)||(23506107-23506193)
chr6 (49-126)||(33583444-33583522)
chr6 (105-202)||(17250190-17250286)
chr6 (43-98)||(8275317-8275372)
chr6 (105-144)||(11327461-11327500)
chr6 (45-136)||(27890650-27890741)
[»] chr8 (40 HSPs)
chr8 (42-140)||(11879860-11879958)
chr8 (42-140)||(11897276-11897374)
chr8 (105-202)||(11879733-11879830)
chr8 (105-202)||(11897149-11897246)
chr8 (121-202)||(5922182-5922263)
chr8 (106-202)||(19704357-19704451)
chr8 (105-202)||(27836363-27836460)
chr8 (50-141)||(45403288-45403379)
chr8 (107-200)||(6810956-6811048)
chr8 (105-202)||(7489182-7489279)
chr8 (105-202)||(23142308-23142404)
chr8 (106-202)||(15294803-15294898)
chr8 (106-202)||(15475172-15475267)
chr8 (48-136)||(5922312-5922400)
chr8 (45-136)||(7489057-7489148)
chr8 (45-136)||(29384086-29384177)
chr8 (44-123)||(40541593-40541672)
chr8 (42-136)||(2040383-2040477)
chr8 (46-136)||(24414062-24414152)
chr8 (103-187)||(29384209-29384298)
chr8 (148-200)||(3094185-3094237)
chr8 (68-136)||(16752287-16752355)
chr8 (61-124)||(19704247-19704310)
chr8 (105-201)||(32424466-32424564)
chr8 (150-202)||(22910146-22910198)
chr8 (46-136)||(17647261-17647351)
chr8 (46-144)||(19335232-19335329)
chr8 (148-202)||(31424296-31424350)
chr8 (89-201)||(6292227-6292337)
chr8 (118-202)||(45403162-45403247)
chr8 (46-122)||(31424442-31424518)
chr8 (105-179)||(15761257-15761332)
chr8 (41-135)||(6811084-6811178)
chr8 (153-202)||(9212202-9212251)
chr8 (42-135)||(22909975-22910067)
chr8 (43-132)||(26879778-26879867)
chr8 (76-136)||(7262026-7262086)
chr8 (46-112)||(23142462-23142528)
chr8 (92-136)||(15294933-15294977)
chr8 (92-136)||(15475302-15475346)
[»] chr5 (35 HSPs)
chr5 (105-202)||(18843848-18843945)
chr5 (46-136)||(41688441-41688531)
chr5 (105-201)||(23172327-23172423)
chr5 (47-125)||(18843990-18844068)
chr5 (45-136)||(41427683-41427774)
chr5 (46-136)||(15051872-15051962)
chr5 (105-202)||(20321075-20321173)
chr5 (44-111)||(6852339-6852406)
chr5 (105-202)||(19579075-19579173)
chr5 (45-133)||(19579210-19579299)
chr5 (105-202)||(41688565-41688661)
chr5 (45-124)||(18051307-18051386)
chr5 (46-136)||(20321207-20321297)
chr5 (106-202)||(21059057-21059152)
chr5 (147-202)||(19979732-19979787)
chr5 (45-136)||(22645501-22645592)
chr5 (45-136)||(43235132-43235223)
chr5 (105-202)||(18051432-18051526)
chr5 (46-136)||(27339962-27340052)
chr5 (74-136)||(19042231-19042293)
chr5 (105-202)||(43235001-43235098)
chr5 (46-136)||(19377867-19377957)
chr5 (105-167)||(38158163-38158224)
chr5 (45-94)||(23172218-23172267)
chr5 (46-98)||(26021613-26021665)
chr5 (45-96)||(13341471-13341522)
chr5 (120-183)||(19042341-19042404)
chr5 (103-187)||(26021468-26021551)
chr5 (87-183)||(15051985-15052081)
chr5 (87-132)||(15446402-15446447)
chr5 (49-98)||(29270325-29270374)
chr5 (103-187)||(43005756-43005841)
chr5 (46-98)||(19979870-19979922)
chr5 (46-86)||(34702982-34703022)
chr5 (103-139)||(43234961-43234997)
[»] chr1 (48 HSPs)
chr1 (105-202)||(9351962-9352059)
chr1 (107-202)||(25146670-25146765)
chr1 (105-202)||(18304710-18304807)
chr1 (105-202)||(42179963-42180061)
chr1 (46-136)||(14074258-14074348)
chr1 (47-136)||(21846050-21846139)
chr1 (105-202)||(23528789-23528886)
chr1 (43-136)||(25146540-25146633)
chr1 (106-202)||(13100324-13100419)
chr1 (54-137)||(9954816-9954899)
chr1 (45-136)||(13100454-13100545)
chr1 (119-202)||(47785992-47786074)
chr1 (45-135)||(9351837-9351927)
chr1 (48-136)||(16125232-16125320)
chr1 (105-201)||(16125354-16125450)
chr1 (48-136)||(17197306-17197394)
chr1 (105-202)||(9954932-9955031)
chr1 (68-136)||(19009745-19009813)
chr1 (45-136)||(17055694-17055784)
chr1 (45-136)||(17869524-17869615)
chr1 (105-202)||(12513414-12513508)
chr1 (85-193)||(12002751-12002859)
chr1 (105-202)||(13276165-13276262)
chr1 (80-136)||(9128647-9128703)
chr1 (105-202)||(9327113-9327211)
chr1 (48-136)||(47786122-47786209)
chr1 (45-99)||(9954770-9954824)
chr1 (105-187)||(21846173-21846255)
chr1 (42-136)||(30619206-30619298)
chr1 (44-136)||(41032546-41032638)
chr1 (147-202)||(9128781-9128836)
chr1 (45-136)||(12513535-12513626)
chr1 (45-136)||(23528920-23529011)
chr1 (148-202)||(32881460-32881514)
chr1 (45-135)||(42179845-42179935)
chr1 (48-136)||(12002638-12002724)
chr1 (41-112)||(13276029-13276097)
chr1 (105-198)||(17869649-17869742)
chr1 (68-135)||(9321532-9321599)
chr1 (45-136)||(16434773-16434864)
chr1 (155-202)||(18228333-18228380)
chr1 (45-136)||(27502129-27502220)
chr1 (105-202)||(19009847-19009942)
chr1 (45-98)||(18304592-18304645)
chr1 (40-136)||(22789447-22789543)
chr1 (48-136)||(32881584-32881672)
chr1 (41-136)||(8773532-8773624)
chr1 (50-137)||(18337135-18337223)
[»] chr4 (33 HSPs)
chr4 (45-136)||(9770376-9770467)
chr4 (105-202)||(5375797-5375895)
chr4 (105-202)||(9770245-9770342)
chr4 (105-202)||(9911310-9911407)
chr4 (43-136)||(6346727-6346820)
chr4 (105-202)||(36120957-36121053)
chr4 (47-135)||(23064737-23064825)
chr4 (139-201)||(13023704-13023766)
chr4 (105-199)||(17466215-17466309)
chr4 (43-136)||(5375929-5376022)
chr4 (45-136)||(55476252-55476343)
chr4 (103-202)||(5361862-5361959)
chr4 (45-136)||(7045208-7045299)
chr4 (81-136)||(8010946-8011001)
chr4 (105-202)||(8889361-8889456)
chr4 (46-136)||(36121087-36121177)
chr4 (46-136)||(9911186-9911276)
chr4 (105-202)||(10143032-10143130)
chr4 (55-137)||(13023821-13023903)
chr4 (36-98)||(24719870-24719932)
chr4 (47-136)||(13551448-13551537)
chr4 (45-133)||(18459405-18459493)
chr4 (45-136)||(8889481-8889571)
chr4 (147-202)||(37240390-37240445)
chr4 (105-198)||(8011035-8011129)
chr4 (45-98)||(27528137-27528190)
chr4 (87-187)||(55476123-55476223)
chr4 (45-133)||(7452772-7452860)
chr4 (105-193)||(23064860-23064948)
chr4 (53-187)||(8409729-8409863)
chr4 (43-98)||(15982740-15982795)
chr4 (49-124)||(46664152-46664227)
chr4 (91-136)||(8367466-8367511)
[»] chr7 (48 HSPs)
chr7 (106-202)||(4247489-4247585)
chr7 (105-202)||(5058662-5058759)
chr7 (106-202)||(20570785-20570881)
chr7 (46-136)||(17811612-17811702)
chr7 (46-136)||(24989549-24989639)
chr7 (105-202)||(44944744-44944841)
chr7 (105-202)||(17811480-17811578)
chr7 (105-202)||(24725371-24725473)
chr7 (48-136)||(8304350-8304438)
chr7 (46-135)||(5058793-5058882)
chr7 (38-136)||(5715549-5715643)
chr7 (43-136)||(25842503-25842596)
chr7 (103-201)||(8329941-8330040)
chr7 (103-193)||(21846344-21846433)
chr7 (46-136)||(22687042-22687132)
chr7 (46-126)||(44944620-44944700)
chr7 (147-202)||(14055384-14055439)
chr7 (147-202)||(14365412-14365467)
chr7 (152-202)||(26281256-26281306)
chr7 (45-126)||(10285677-10285758)
chr7 (43-136)||(39182420-39182513)
chr7 (44-132)||(1981098-1981186)
chr7 (48-136)||(20570662-20570750)
chr7 (53-136)||(27221678-27221762)
chr7 (106-202)||(5715422-5715514)
chr7 (77-183)||(8253990-8254096)
chr7 (45-136)||(11326547-11326638)
chr7 (147-202)||(24990012-24990067)
chr7 (151-202)||(27221551-27221602)
chr7 (106-202)||(8346431-8346529)
chr7 (46-136)||(14055521-14055610)
chr7 (46-136)||(14365549-14365638)
chr7 (47-136)||(9685070-9685159)
chr7 (105-202)||(11325111-11325209)
chr7 (87-187)||(25842625-25842725)
chr7 (45-136)||(4247620-4247711)
chr7 (87-187)||(1981217-1981317)
chr7 (105-195)||(26617376-26617461)
chr7 (46-134)||(26281165-26281251)
chr7 (79-197)||(17809000-17809119)
chr7 (39-98)||(21157468-21157527)
chr7 (70-136)||(1977812-1977878)
chr7 (103-202)||(8343699-8343796)
chr7 (46-136)||(23618204-23618294)
chr7 (47-124)||(4575006-4575083)
chr7 (87-187)||(23618323-23618423)
chr7 (105-174)||(27509311-27509379)
chr7 (45-121)||(11325257-11325333)
[»] chr3 (48 HSPs)
chr3 (105-201)||(28745910-28746006)
chr3 (105-202)||(39428035-39428133)
chr3 (119-202)||(15515171-15515252)
chr3 (53-136)||(3041487-3041570)
chr3 (45-136)||(8592173-8592264)
chr3 (45-136)||(28746040-28746131)
chr3 (45-136)||(41671443-41671534)
chr3 (46-136)||(24619972-24620062)
chr3 (42-136)||(29067541-29067634)
chr3 (43-136)||(8560229-8560322)
chr3 (45-110)||(24649523-24649588)
chr3 (118-202)||(42696980-42697065)
chr3 (46-124)||(22355841-22355919)
chr3 (45-126)||(20766675-20766756)
chr3 (105-178)||(25870221-25870294)
chr3 (105-202)||(8156028-8156126)
chr3 (46-136)||(18014255-18014345)
chr3 (105-202)||(24620096-24620196)
chr3 (68-134)||(30727656-30727722)
chr3 (49-123)||(39428184-39428258)
chr3 (42-135)||(3449081-3449174)
chr3 (105-199)||(22494681-22494781)
chr3 (43-136)||(25870094-25870187)
chr3 (46-187)||(6860986-6861121)
chr3 (53-187)||(9169808-9169942)
chr3 (103-195)||(22137417-22137509)
chr3 (45-136)||(22971073-22971163)
chr3 (46-136)||(17064571-17064661)
chr3 (105-171)||(20756186-20756252)
chr3 (87-187)||(19348688-19348788)
chr3 (43-124)||(22137553-22137634)
chr3 (47-135)||(19348818-19348906)
chr3 (87-170)||(8560351-8560433)
chr3 (87-193)||(8592293-8592399)
chr3 (50-137)||(13006088-13006174)
chr3 (45-136)||(27090706-27090797)
chr3 (46-136)||(10872490-10872580)
chr3 (45-170)||(15806222-15806348)
chr3 (103-195)||(21963568-21963663)
chr3 (103-195)||(21986004-21986099)
chr3 (105-174)||(22355961-22356030)
chr3 (103-181)||(6136466-6136543)
chr3 (43-123)||(21963708-21963788)
chr3 (43-123)||(21986144-21986224)
chr3 (105-202)||(29067417-29067507)
chr3 (49-136)||(27676700-27676787)
chr3 (87-170)||(18014143-18014226)
chr3 (87-123)||(20766795-20766831)
[»] scaffold0186 (2 HSPs)
scaffold0186 (105-202)||(8576-8671)
scaffold0186 (44-136)||(8705-8797)
[»] chr2 (37 HSPs)
chr2 (118-202)||(36429981-36430065)
chr2 (106-202)||(35565857-35565950)
chr2 (43-136)||(20063987-20064080)
chr2 (56-136)||(27523881-27523961)
chr2 (121-201)||(31578138-31578217)
chr2 (45-136)||(19262090-19262181)
chr2 (45-135)||(21869095-21869185)
chr2 (43-136)||(20033994-20034087)
chr2 (106-200)||(15588754-15588844)
chr2 (103-202)||(1690625-1690724)
chr2 (45-136)||(31237750-31237841)
chr2 (46-136)||(1405047-1405137)
chr2 (46-136)||(25538920-25539010)
chr2 (46-136)||(30433079-30433169)
chr2 (105-202)||(31237875-31237973)
chr2 (44-136)||(974602-974695)
chr2 (44-136)||(7302046-7302138)
chr2 (45-136)||(19245853-19245944)
chr2 (41-187)||(19492079-19492227)
chr2 (103-198)||(34841717-34841813)
chr2 (87-193)||(21869215-21869321)
chr2 (46-134)||(8428488-8428576)
chr2 (105-169)||(30432981-30433045)
chr2 (87-193)||(974467-974573)
chr2 (85-187)||(20034114-20034216)
chr2 (45-139)||(23863264-23863357)
chr2 (103-171)||(13502570-13502639)
chr2 (118-198)||(31023438-31023519)
chr2 (79-136)||(34578153-34578210)
chr2 (91-187)||(41002160-41002256)
chr2 (48-136)||(15588632-15588720)
chr2 (162-202)||(30432552-30432592)
chr2 (87-170)||(34578041-34578124)
chr2 (105-144)||(20063914-20063953)
chr2 (152-202)||(1404916-1404966)
chr2 (105-175)||(19262215-19262285)
chr2 (105-198)||(25539044-25539138)
[»] scaffold0017 (1 HSPs)
scaffold0017 (43-111)||(38299-38367)
[»] scaffold0079 (1 HSPs)
scaffold0079 (44-135)||(14699-14790)
[»] scaffold0016 (2 HSPs)
scaffold0016 (45-136)||(56199-56290)
scaffold0016 (162-202)||(58738-58778)
[»] scaffold0417 (2 HSPs)
scaffold0417 (109-202)||(7358-7451)
scaffold0417 (84-136)||(7268-7320)
[»] scaffold2084 (1 HSPs)
scaffold2084 (44-136)||(92-184)
[»] scaffold0603 (1 HSPs)
scaffold0603 (105-198)||(8858-8952)
[»] scaffold0526 (2 HSPs)
scaffold0526 (87-187)||(8292-8391)
scaffold0526 (45-136)||(8420-8511)
[»] scaffold0061 (1 HSPs)
scaffold0061 (45-111)||(76083-76149)
[»] scaffold0042 (1 HSPs)
scaffold0042 (103-186)||(93602-93686)
[»] scaffold0182 (1 HSPs)
scaffold0182 (68-111)||(24675-24718)
[»] scaffold0027 (1 HSPs)
scaffold0027 (87-187)||(133009-133109)
[»] scaffold0510 (1 HSPs)
scaffold0510 (70-136)||(3-69)
[»] scaffold0048 (1 HSPs)
scaffold0048 (46-136)||(61089-61179)
[»] scaffold0028 (1 HSPs)
scaffold0028 (46-136)||(145852-145942)


Alignment Details
Target: chr6 (Bit Score: 142; Significance: 1e-74; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 21355074 - 21354873
Alignment:
Q  1 aacatagtagatgttactttattatctaagctataagttctaaccaaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcggg 100  Q
    |||||| |||||||||||||||||||||||||||||||||| | ||||||||||||||| |||||| ||||||| || |||||||||||| |||||| ||    
T  21355074 aacataatagatgttactttattatctaagctataagttctgatcaaggttgtcaaaattgggattttacttcaagttgaaagggaatagaaaaatcagg 21354975  T
Q  101 actcgtaaaatcacaaccaaaatcgatggattttacctaaaaaatttaatactaaatatacgttataaatggtatatagtcataaattacttagtttata 200  Q
    |||||||||||| ||| |||||||||||||||| ||| ||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  21354974 actcgtaaaatcgcaatcaaaatcgatggatttcacccaaataatttaatactaaatatatgttataaatggtatatagtcataaattacttagtttata 21354875  T
Q  201 ag 202  Q
    ||    
T  21354874 ag 21354873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 45 - 136
Target Start/End: Complemental strand, 7223870 - 7223779
Alignment:
Q  45 caaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 136  Q
    |||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||  ||| ||||||||| |||||||||    
T  7223870 caaggttgtcaaaatcgggactttacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaattgcaatcaaaatcgaaggattttac 7223779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 105 - 202
Target Start/End: Complemental strand, 23898041 - 23897944
Alignment:
Q  105 gtaaaatcacaaccaaaatcgatggattttacctaaaaaatttaatactaaatatacgttataaatggtatatagtcataaattacttagtttataag 202  Q
    |||||||| ||| |||||||||||||||||||| ||||||   ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||    
T  23898041 gtaaaatctcaatcaaaatcgatggattttaccaaaaaaaaaaaatactaaatatatgttataaatggtatatagtcataaatgacttagtttataag 23897944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 105 - 202
Target Start/End: Original strand, 15528009 - 15528106
Alignment:
Q  105 gtaaaatcacaaccaaaatcgatggattttacctaaaaaatttaatactaaatatacgttataaatggtatatagtcataaattacttagtttataag 202  Q
    |||||||| ||| | ||||||||||||||  || |||||||||||||||||||||| ||||||||||||||||||| |||||| ||||||||||||||    
T  15528009 gtaaaatcgcaatcgaaatcgatggatttcccccaaaaaatttaatactaaatatatgttataaatggtatatagttataaatgacttagtttataag 15528106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 105 - 202
Target Start/End: Complemental strand, 17103425 - 17103328
Alignment:
Q  105 gtaaaatcacaaccaaaatcgatggattttacctaaaaaatttaatactaaatatacgttataaatggtatatagtcataaattacttagtttataag 202  Q
    |||||||| ||| ||||||||||||||||||||||||||| |||||| |||||||| || ||||||| ||||||||| ||||| ||||||||||||||    
T  17103425 gtaaaatcgcaatcaaaatcgatggattttacctaaaaaaattaataataaatatatgtcataaatgatatatagtcgtaaataacttagtttataag 17103328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 105 - 202
Target Start/End: Original strand, 26053195 - 26053292
Alignment:
Q  105 gtaaaatcacaaccaaaatcgatggattttacctaaaaaatttaatactaaatatacgttataaatggtatatagtcataaattacttagtttataag 202  Q
    |||||||| ||| |||||||||||||||||||| |||||   ||||||||| |||| |||||||||||||||||||||||||| ||||||||||||||    
T  26053195 gtaaaatcgcaatcaaaatcgatggattttaccaaaaaataataatactaactatatgttataaatggtatatagtcataaataacttagtttataag 26053292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 105 - 202
Target Start/End: Original strand, 26073248 - 26073345
Alignment:
Q  105 gtaaaatcacaaccaaaatcgatggattttacctaaaaaatttaatactaaatatacgttataaatggtatatagtcataaattacttagtttataag 202  Q
    |||||||| ||| |||||||||||||||||||| |||||   ||||||||| |||| |||||||||||||||||||||||||| ||||||||||||||    
T  26073248 gtaaaatcgcaatcaaaatcgatggattttaccaaaaaataataatactaactatatgttataaatggtatatagtcataaataacttagtttataag 26073345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 45 - 136
Target Start/End: Complemental strand, 19748688 - 19748597
Alignment:
Q  45 caaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 136  Q
    |||||||||||||||||||| | || ||||||| ||||||||||||||||||||||| |||||||||| ||| ||||||||| |||||||||    
T  19748688 caaggttgtcaaaatcgggactttaattcaggttgaaagggaatagcaaaatcgggattcgtaaaatcgcaatcaaaatcgaaggattttac 19748597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 49 - 136
Target Start/End: Original strand, 27614434 - 27614521
Alignment:
Q  49 gttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 136  Q
    |||||||||||  ||| | ||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| |||||||||    
T  27614434 gttgtcaaaattaggaatttacttcaggtcgaaagggaatagtaaaatcgggactcgtaaaatcacaatcaaaatcgaaggattttac 27614521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 43 - 136
Target Start/End: Original strand, 11327334 - 11327427
Alignment:
Q  43 accaaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 136  Q
    |||||||||||||||||||||  | |||||||||| |||||||||||||||||||| ||||||||||||| ||| ||||||||| | |||||||    
T  11327334 accaaggttgtcaaaatcggggctttacttcaggttgaaagggaatagcaaaatcgagactcgtaaaatcgcaatcaaaatcgaagaattttac 11327427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 41 - 136
Target Start/End: Original strand, 17543500 - 17543595
Alignment:
Q  41 taaccaaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 136  Q
    ||||||||||||| ||||| |||| | ||||||||||||||| ||||||||||||||||||||| |||||||  || ||||||||| |||||||||    
T  17543500 taaccaaggttgttaaaattgggactttacttcaggtcgaaaaggaatagcaaaatcgggactcataaaatcgaaatcaaaatcgaaggattttac 17543595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 45 - 136
Target Start/End: Original strand, 22498214 - 22498305
Alignment:
Q  45 caaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 136  Q
    ||||||||||||||| |||| | ||||||||||||||||||||||||||||| ||||||||||||||| ||| |||||| ||  ||||||||    
T  22498214 caaggttgtcaaaattgggactttacttcaggtcgaaagggaatagcaaaattgggactcgtaaaatcgcaatcaaaattgaacgattttac 22498305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 105 - 206
Target Start/End: Original strand, 7918249 - 7918348
Alignment:
Q  105 gtaaaatcacaaccaaaatcgatggattttacctaaaaaatttaatactaaatatacgttataaatggtatatagtcataaattacttagtttataagtg 204  Q
    |||||||| ||| |||||||||||||||||||| |||||||  |||||||||| || |||||||||| ||||||||||||||| ||||| ||||||| ||    
T  7918249 gtaaaatcgcaatcaaaatcgatggattttaccaaaaaaat--aatactaaatttatgttataaatgatatatagtcataaatgacttaatttataaatg 7918346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 42 - 136
Target Start/End: Complemental strand, 17103553 - 17103459
Alignment:
Q  42 aaccaaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 136  Q
    ||||||||||||||||||||||| | ||||||| |||||||||||||| ||||||| |||||||||||||| ||| ||| | ||| |||||||||    
T  17103553 aaccaaggttgtcaaaatcgggactttacttcaagtcgaaagggaataacaaaatcaggactcgtaaaatcgcaatcaataccgaaggattttac 17103459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 46 - 125
Target Start/End: Original strand, 3573674 - 3573754
Alignment:
Q  46 aaggttgtcaaaatcgggattatacttcaggtcgaaa-gggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcg 125  Q
    ||||||||||||||||||| | ||||||||||||||| ||||||||||||||| |||||||||||||| ||| ||||||||    
T  3573674 aaggttgtcaaaatcgggactttacttcaggtcgaaaagggaatagcaaaatcaggactcgtaaaatcgcaatcaaaatcg 3573754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 44 - 136
Target Start/End: Original strand, 7918123 - 7918215
Alignment:
Q  44 ccaaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 136  Q
    ||||||||||||||||||||  | ||||||||||||||||||||||||| |||| |||||||||||||  ||| ||||||||| | |||||||    
T  7918123 ccaaggttgtcaaaatcggggctttacttcaggtcgaaagggaatagcagaatcaggactcgtaaaattgcaatcaaaatcgaagaattttac 7918215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 49 - 136
Target Start/End: Original strand, 26053074 - 26053161
Alignment:
Q  49 gttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 136  Q
    |||||||||||| ||| | ||||||||||||||||| ||||||||||| ||||||||||||||| ||| |||||||||  ||||||||    
T  26053074 gttgtcaaaatcaggactttacttcaggtcgaaaggaaatagcaaaattgggactcgtaaaatcccaatcaaaatcgaatgattttac 26053161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 49 - 136
Target Start/End: Original strand, 26073127 - 26073214
Alignment:
Q  49 gttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 136  Q
    |||||||||||| ||| | ||||||||||||||||| ||||||||||| ||||||||||||||| ||| |||||||||  ||||||||    
T  26073127 gttgtcaaaatcaggactttacttcaggtcgaaaggaaatagcaaaattgggactcgtaaaatcccaatcaaaatcgaatgattttac 26073214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 105 - 202
Target Start/End: Complemental strand, 19748563 - 19748466
Alignment:
Q  105 gtaaaatcacaaccaaaatcgatggattttacctaaaaaatttaatactaaatatacgttataaatggtatatagtcataaattacttagtttataag 202  Q
    |||||||| ||| ||||||||||||||||||||  ||||   ||||||||||||||  ||||||||| ||||||||| ||||| ||||||||||||||    
T  19748563 gtaaaatcgcaatcaaaatcgatggattttaccagaaaataataatactaaatatattttataaatgatatatagtcttaaatgacttagtttataag 19748466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 43 - 136
Target Start/End: Original strand, 15527882 - 15527975
Alignment:
Q  43 accaaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 136  Q
    ||||||| | ||||||||  || | ||||||||||||||||| |||||||||||||| ||||| |||||| ||| ||||||||| |||||||||    
T  15527882 accaaggctatcaaaatcctgactttacttcaggtcgaaaggaaatagcaaaatcggaactcggaaaatcgcaatcaaaatcgaaggattttac 15527975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 46 - 135
Target Start/End: Original strand, 30912181 - 30912270
Alignment:
Q  46 aaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggatttta 135  Q
    ||||||||||||||||| ||| | |||||||| ||||| ||||||||||||||  | |||||||||| |||||||||| || ||||||||    
T  30912181 aaggttgtcaaaatcggaattttgcttcaggttgaaagagaatagcaaaatcgataatcgtaaaatctcaaccaaaattgaaggatttta 30912270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 44 - 136
Target Start/End: Complemental strand, 23898166 - 23898074
Alignment:
Q  44 ccaaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 136  Q
    ||||| ||||||||||||||||| | |||||||||||| | ||| ||||||||||  | ||||||||||  |||||||||||| |||||||||    
T  23898166 ccaagattgtcaaaatcgggattttgcttcaggtcgaatgagaagagcaaaatcgacaatcgtaaaatcgaaaccaaaatcgaaggattttac 23898074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 147 - 202
Target Start/End: Original strand, 17543681 - 17543736
Alignment:
Q  147 taatactaaatatacgttataaatggtatatagtcataaattacttagtttataag 202  Q
    |||||||||||||| |||||||||||||||||||| ||||| ||||||||||||||    
T  17543681 taatactaaatatatgttataaatggtatatagtcgtaaatgacttagtttataag 17543736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 45 - 136
Target Start/End: Original strand, 27233073 - 27233164
Alignment:
Q  45 caaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 136  Q
    ||||||||||||||||| |  | ||||||||||| |||||||||  |||||||||||||| ||||||| ||| |||||| || |||||||||    
T  27233073 caaggttgtcaaaatcgagcctttacttcaggtcaaaagggaatgacaaaatcgggactcataaaatcgcaatcaaaattgaaggattttac 27233164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 51 - 124
Target Start/End: Complemental strand, 31108504 - 31108431
Alignment:
Q  51 tgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatc 124  Q
    |||||||||| ||| | ||||||||||||||||||||||||||||||| || |||||||| | ||| |||||||    
T  31108504 tgtcaaaatcaggactttacttcaggtcgaaagggaatagcaaaatcgagattcgtaaaaccgcaatcaaaatc 31108431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 105 - 202
Target Start/End: Complemental strand, 7223745 - 7223645
Alignment:
Q  105 gtaaaatcacaaccaaaatcgatggattttacctaaaaaatttaatacta----aatatacgttataaatggtatatagtcataaattacttagtttata 200  Q
    |||||||| ||| || |||| |||||||||||| ||| ||  ||||||||    |||||| |||||||||||||||||||||||||| ||||||||||||    
T  7223745 gtaaaatcgcaatcagaatcaatggattttacc-aaacaaaataatactaaattaatatatgttataaatggtatatagtcataaatgacttagtttata 7223647  T
Q  201 ag 202  Q
    ||    
T  7223646 ag 7223645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 105 - 178
Target Start/End: Original strand, 27233198 - 27233271
Alignment:
Q  105 gtaaaatcacaaccaaaatcgatggattttacctaaaaaatttaatactaaatatacgttataaatggtatata 178  Q
    |||||||| ||| |||||||||| |||||||||  ||||   |||||||||||||| |||||||||||||||||    
T  27233198 gtaaaatcgcaatcaaaatcgatagattttaccataaaacaataatactaaatatatgttataaatggtatata 27233271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 87 - 187
Target Start/End: Complemental strand, 27890621 - 27890521
Alignment:
Q  87 atagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttacctaaa-aaatttaatactaaatatacgttataaatggtatatagtcataa 185  Q
    ||||||||||| |||||||||||||| ||| ||||||||| | ||| |||| ||| |||  |||| ||||||||| ||||||||| | ||||||||||||    
T  27890621 atagcaaaatcaggactcgtaaaatcgcaatcaaaatcga-gaattctaccaaaacaaaaataatgctaaatatatgttataaattgcatatagtcataa 27890523  T
Q  186 at 187  Q
    ||    
T  27890522 at 27890521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 147 - 202
Target Start/End: Original strand, 30912353 - 30912408
Alignment:
Q  147 taatactaaatatacgttataaatggtatatagtcataaattacttagtttataag 202  Q
    |||||||||||||| || ||||||| |||||| |||||||| ||||||||||||||    
T  30912353 taatactaaatatatgtgataaatgatatataatcataaatgacttagtttataag 30912408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 45 - 123
Target Start/End: Complemental strand, 17250412 - 17250335
Alignment:
Q  45 caaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaat 123  Q
    ||||||| |||||||||||| | ||||||||||||||||| ||| ||  ||| ||||||||||||||| ||| ||||||    
T  17250412 caaggttatcaaaatcgggactttacttcaggtcgaaaggaaatggc-gaattgggactcgtaaaatcgcaatcaaaat 17250335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 49 - 135
Target Start/End: Complemental strand, 23506193 - 23506107
Alignment:
Q  49 gttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggatttta 135  Q
    |||||| |||| |||||| ||||| | |||||||| ||||||||||||||  | | ||||||||||||  |||||||| ||||||||    
T  23506193 gttgtcgaaatggggattttactttaagtcgaaagagaatagcaaaatcgaaaattgtaaaatcacaattaaaatcgaaggatttta 23506107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 49 - 126
Target Start/End: Original strand, 33583444 - 33583522
Alignment:
Q  49 gttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaa-aatcgggactcgtaaaatcacaaccaaaatcga 126  Q
    |||||||||||||||||| |||||| |||||||||||  |||||| |||||  | ||||||||||| || |||||||||    
T  33583444 gttgtcaaaatcgggattttacttccggtcgaaaggggttagcaataatcgtaaatcgtaaaatcaaaatcaaaatcga 33583522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 202
Target Start/End: Complemental strand, 17250286 - 17250190
Alignment:
Q  105 gtaaaatcacaaccaaaatcgatggattttacctaaaaaatttaatactaaatatacgttataaatggtatatagtcataaattacttagtttataag 202  Q
    ||||| || ||| ||||||| |||||||||||| |||||   || || ||||||||  ||||||||  ||||||||||||||| ||||||||||||||    
T  17250286 gtaaattcgcaatcaaaatcaatggattttaccaaaaaacaatagtaataaatatatattataaatt-tatatagtcataaatgacttagtttataag 17250190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 98
Target Start/End: Original strand, 8275317 - 8275372
Alignment:
Q  43 accaaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcg 98  Q
    ||||||| |||||||||||| ||| | |||| ||| ||||||||||||||||||||    
T  8275317 accaaggctgtcaaaatcggaattttgcttctggttgaaagggaatagcaaaatcg 8275372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 105 - 144
Target Start/End: Original strand, 11327461 - 11327500
Alignment:
Q  105 gtaaaatcacaaccaaaatcgatggattttacctaaaaaa 144  Q
    |||||||| |||||||||||||||||||||||| ||||||    
T  11327461 gtaaaatcgcaaccaaaatcgatggattttaccaaaaaaa 11327500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 136
Target Start/End: Complemental strand, 27890741 - 27890650
Alignment:
Q  45 caaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 136  Q
    ||||||||||||| ||| || | ||||||| || |||||||| ||| ||||| || ||||||||||||  || |||||| || |||||||||    
T  27890741 caaggttgtcaaattcgagactttacttcaagttgaaagggagtagtaaaattggaactcgtaaaatcgtaatcaaaattgaaggattttac 27890650  T

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Target: chr8 (Bit Score: 71; Significance: 2e-32; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 42 - 140
Target Start/End: Complemental strand, 11879958 - 11879860
Alignment:
Q  42 aaccaaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttacctaa 140  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||||| |||||||| |||||||||||| ||| ||||||||| |||||||||||||    
T  11879958 aaccaaggttgtcaaaatcgggattttacttcaggtcaaaagggaatagtaaaatcggaactcgtaaaatcgcaatcaaaatcgaaggattttacctaa 11879860  T

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Target: chr8; HSP #2
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 42 - 140
Target Start/End: Complemental strand, 11897374 - 11897276
Alignment:
Q  42 aaccaaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttacctaa 140  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||||| |||||||| |||||||||||| ||| ||||||||| |||||||||||||    
T  11897374 aaccaaggttgtcaaaatcgggattttacttcaggtcaaaagggaatagtaaaatcggaactcgtaaaatcgcaatcaaaatcgaaggattttacctaa 11897276  T

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Target: chr8; HSP #3
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 105 - 202
Target Start/End: Complemental strand, 11879830 - 11879733
Alignment:
Q  105 gtaaaatcacaaccaaaatcgatggattttacctaaaaaatttaatactaaatatacgttataaatggtatatagtcataaattacttagtttataag 202  Q
    |||||||| ||  |||||||||||||||||||| |||||   |||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  11879830 gtaaaatcgcattcaaaatcgatggattttaccaaaaaataataatactaaatatatgttataaatggtatatagtcataaattacttagtttataag 11879733  T

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Target: chr8; HSP #4
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 105 - 202
Target Start/End: Complemental strand, 11897246 - 11897149
Alignment:
Q  105 gtaaaatcacaaccaaaatcgatggattttacctaaaaaatttaatactaaatatacgttataaatggtatatagtcataaattacttagtttataag 202  Q
    |||||||| ||  |||||||||||||||||||| |||||   |||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  11897246 gtaaaatcgcattcaaaatcgatggattttaccaaaaaataataatactaaatatatgttataaatggtatatagtcataaattacttagtttataag 11897149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 121 - 202
Target Start/End: Complemental strand, 5922263 - 5922182
Alignment:
Q  121 aatcgatggattttacctaaaaaatttaatactaaatatacgttataaatggtatatagtcataaattacttagtttataag 202  Q
    ||||||||||||||||| |||||||||||||||||||||| ||||| |||||||||||||||||||| || || ||||||||    
T  5922263 aatcgatggattttacccaaaaaatttaatactaaatatatgttatgaatggtatatagtcataaatgacctaatttataag 5922182  T

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Target: chr8; HSP #6
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 106 - 202
Target Start/End: Original strand, 19704357 - 19704451
Alignment:
Q  106 taaaatcacaaccaaaatcgatggattttacctaaaaaatttaatactaaatatacgttataaatggtatatagtcataaattacttagtttataag 202  Q
    ||||||||||| |||||||||||||||||||||||||||   || |||||||||| |||| ||||||||||||||||||||| |||| |||||||||    
T  19704357 taaaatcacaatcaaaatcgatggattttacctaaaaaaa--aaaactaaatatatgttacaaatggtatatagtcataaataacttggtttataag 19704451  T

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Target: chr8; HSP #7
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 105 - 202
Target Start/End: Original strand, 27836363 - 27836460
Alignment:
Q  105 gtaaaatcacaaccaaaatcgatggattttacctaaaaaatttaatactaaatatacgttataaatggtatatagtcataaattacttagtttataag 202  Q
    |||||||||||| ||||||||||||||||||||   ||||   ||||||||||| | |||||||||||||||||||||||||| ||||||||||||||    
T  27836363 gtaaaatcacaatcaaaatcgatggattttaccagcaaaaaaaaatactaaatacatgttataaatggtatatagtcataaatgacttagtttataag 27836460  T

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Target: chr8; HSP #8
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 50 - 141
Target Start/End: Complemental strand, 45403379 - 45403288
Alignment:
Q  50 ttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttacctaaa 141  Q
    ||||||||||||||| | || |||| ||||||||||||||||||||||| ||||||||||||| ||| ||||||||| ||||||||| ||||    
T  45403379 ttgtcaaaatcgggactttatttcacgtcgaaagggaatagcaaaatcgagactcgtaaaatcgcaatcaaaatcgaaggattttacttaaa 45403288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 107 - 200
Target Start/End: Complemental strand, 6811048 - 6810956
Alignment:
Q  107 aaaatcacaaccaaaatcgatggattttacctaaaaaatttaatactaaatatacgttataaatggtatatagtcataaattacttagtttata 200  Q
    |||||| ||| |||||||||||||||||||| |||||| | ||||||||||||| |||||||||| |||||||| |||||| ||||||||||||    
T  6811048 aaaatcgcaatcaaaatcgatggattttaccaaaaaaaat-aatactaaatatatgttataaatgatatatagttataaatgacttagtttata 6810956  T

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Target: chr8; HSP #10
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 105 - 202
Target Start/End: Original strand, 7489182 - 7489279
Alignment:
Q  105 gtaaaatcacaaccaaaatcgatggattttacctaaaaaatttaatactaaatatacgttataaatggtatatagtcataaattacttagtttataag 202  Q
    |||||||| ||| ||||||||||| |||||||  |||||  ||||||||||||||| |||||||||| ||||||||||||||| ||||| ||||||||    
T  7489182 gtaaaatcgcaatcaaaatcgatgaattttactcaaaaatattaatactaaatatatgttataaatgatatatagtcataaatgacttaatttataag 7489279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 105 - 202
Target Start/End: Complemental strand, 23142404 - 23142308
Alignment:
Q  105 gtaaaatcacaaccaaaatcgatggattttacctaaaaaatttaatactaaatatacgttataaatggtatatagtcataaattacttagtttataag 202  Q
    |||||||| ||| ||||||||||||| |||||| |||| | | ||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||    
T  23142404 gtaaaatcgcaatcaaaatcgatggactttaccaaaaataat-aatactaaatatatgttataaatggtatatagtcataaatgacttaatttataag 23142308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 106 - 202
Target Start/End: Complemental strand, 15294898 - 15294803
Alignment:
Q  106 taaaatcacaaccaaaatcgatggattttacctaaaaaatttaatactaaatatacgttataaatggtatatagtcataaattacttagtttataag 202  Q
    ||||||| ||| ||||||| ||||||||||||||||||| | ||||||||||||| |||| |||| || ||||||||||||| ||||||||||||||    
T  15294898 taaaatcgcaagcaaaatccatggattttacctaaaaaaat-aatactaaatatatgttacaaatagtgtatagtcataaatgacttagtttataag 15294803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 106 - 202
Target Start/End: Complemental strand, 15475267 - 15475172
Alignment:
Q  106 taaaatcacaaccaaaatcgatggattttacctaaaaaatttaatactaaatatacgttataaatggtatatagtcataaattacttagtttataag 202  Q
    ||||||| ||| ||||||| ||||||||||||||||||| | ||||||||||||| |||| |||| || ||||||||||||| ||||||||||||||    
T  15475267 taaaatcgcaagcaaaatccatggattttacctaaaaaaat-aatactaaatatatgttacaaatagtgtatagtcataaatgacttagtttataag 15475172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 48 - 136
Target Start/End: Complemental strand, 5922400 - 5922312
Alignment:
Q  48 ggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 136  Q
    ||||||||||||||||| | |||||||||||||||||||||||||||||| | ||  ||| |||| ||| ||||||||| |||||||||    
T  5922400 ggttgtcaaaatcgggactttacttcaggtcgaaagggaatagcaaaatcagaacatgtacaatcgcaatcaaaatcgaaggattttac 5922312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 45 - 136
Target Start/End: Original strand, 7489057 - 7489148
Alignment:
Q  45 caaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 136  Q
    |||||||||||||||| ||| | ||||||| ||||||||| |||||||||||  |||||||||||||| ||| ||||||||  |||||||||    
T  7489057 caaggttgtcaaaatcaggactttacttcaagtcgaaaggaaatagcaaaattaggactcgtaaaatcgcaatcaaaatcggaggattttac 7489148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 45 - 136
Target Start/End: Original strand, 29384086 - 29384177
Alignment:
Q  45 caaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 136  Q
    |||||||||||||||||||||| | ||||||||||||||  || || |||||||  | |||||||||| ||||||||||||| |||||||||    
T  29384086 caaggttgtcaaaatcgggattttgcttcaggtcgaaagaaaagagaaaaatcgacaatcgtaaaatcgcaaccaaaatcgaaggattttac 29384177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 44 - 123
Target Start/End: Original strand, 40541593 - 40541672
Alignment:
Q  44 ccaaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaat 123  Q
    |||||||| |||||||||||| | ||||||| ||||||||| | ||||||||||||||||||||||||| ||| ||||||    
T  40541593 ccaaggttatcaaaatcgggactttacttcaagtcgaaaggaagtagcaaaatcgggactcgtaaaatcgcaatcaaaat 40541672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 42 - 136
Target Start/End: Complemental strand, 2040477 - 2040383
Alignment:
Q  42 aaccaaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 136  Q
    |||||| ||| | |||||||||| | ||||||| |||||||| || |||||||||||| |||||||||||| ||| ||||||||| |||||||||    
T  2040477 aaccaaagttatgaaaatcgggactttacttcaagtcgaaagagagtagcaaaatcggaactcgtaaaatcgcaatcaaaatcgaaggattttac 2040383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 46 - 136
Target Start/End: Original strand, 24414062 - 24414152
Alignment:
Q  46 aaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 136  Q
    |||||||||||||| || | | ||||||| |||||||||||||||||||||   ||||||||||||| ||| ||||||||| |||||||||    
T  24414062 aaggttgtcaaaattggaactttacttcatgtcgaaagggaatagcaaaatttagactcgtaaaatcgcaatcaaaatcgaaggattttac 24414152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 103 - 187
Target Start/End: Original strand, 29384209 - 29384298
Alignment:
Q  103 tcgtaaaatcacaaccaaaatcgatggattttacctaaaaaatt-----taatactaaatatacgttataaatggtatatagtcataaat 187  Q
    |||||||||| ||| |||||||||||||||||||| ||||||       |||||||||||||| ||||||||||||||||||||||||||    
T  29384209 tcgtaaaatcgcaatcaaaatcgatggattttaccaaaaaaaaaaatactaatactaaatatatgttataaatggtatatagtcataaat 29384298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 148 - 200
Target Start/End: Original strand, 3094185 - 3094237
Alignment:
Q  148 aatactaaatatacgttataaatggtatatagtcataaattacttagtttata 200  Q
    ||||||||||||| |||||||||||||||||||||||||| ||||||||||||    
T  3094185 aatactaaatatatgttataaatggtatatagtcataaatgacttagtttata 3094237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 68 - 136
Target Start/End: Complemental strand, 16752355 - 16752287
Alignment:
Q  68 tacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 136  Q
    ||||||| ||||||||||| ||||||||| ||||||||||||||| ||| ||||||||| |||||||||    
T  16752355 tacttcaagtcgaaagggagtagcaaaattgggactcgtaaaatcgcaaacaaaatcgaaggattttac 16752287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 61 - 124
Target Start/End: Original strand, 19704247 - 19704310
Alignment:
Q  61 gggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatc 124  Q
    |||||| ||||||| ||| ||||||||||||||||||||||||||||||||| ||| |||||||    
T  19704247 gggattttacttcaagtccaaagggaatagcaaaatcgggactcgtaaaatcgcaatcaaaatc 19704310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 105 - 201
Target Start/End: Complemental strand, 32424564 - 32424466
Alignment:
Q  105 gtaaaatcacaaccaaaatcgatggattttacctaaaaaatttaatactaaatatac--gttataaatggtatatagtcataaattacttagtttataa 201  Q
    |||||||| |||  ||||||||| ||||||| | | |||| |||||||||||||||   |||||||||||||||||||||||||| ||||||| |||||    
T  32424564 gtaaaatcgcaataaaaatcgatagattttatccagaaaaattaatactaaatatatatgttataaatggtatatagtcataaatgacttagtatataa 32424466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 150 - 202
Target Start/End: Original strand, 22910146 - 22910198
Alignment:
Q  150 tactaaatatacgttataaatggtatatagtcataaattacttagtttataag 202  Q
    |||||| |||| |||||||||||||||||||||||||||||||| ||||||||    
T  22910146 tactaagtatatgttataaatggtatatagtcataaattacttaatttataag 22910198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 46 - 136
Target Start/End: Complemental strand, 17647351 - 17647261
Alignment:
Q  46 aaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 136  Q
    |||||||| |||||||||||| | |||||||||||||| ||  ||||||||||  | || ||||||| ||| ||||||||| |||||||||    
T  17647351 aaggttgttaaaatcgggattttgcttcaggtcgaaagagatgagcaaaatcgacaatcataaaatcgcaatcaaaatcgaaggattttac 17647261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 46 - 144
Target Start/End: Complemental strand, 19335329 - 19335232
Alignment:
Q  46 aaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttacctaaaaaa 144  Q
    ||||||||||||||||||| | ||||| ||||| ||| | ||||| ||||| || |||| || |||||||| |||||||||||||||||| | ||||||    
T  19335329 aaggttgtcaaaatcgggactttactttaggtcaaaaagaaatagtaaaattggaactc-tacaatcacaatcaaaatcgatggattttatcaaaaaaa 19335232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 148 - 202
Target Start/End: Complemental strand, 31424350 - 31424296
Alignment:
Q  148 aatactaaatatacgttataaatggtatatagtcataaattacttagtttataag 202  Q
    ||||||||||||| ||||||| |||||||||||||||||  ||||||||||||||    
T  31424350 aatactaaatatatgttataattggtatatagtcataaacgacttagtttataag 31424296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 89 - 201
Target Start/End: Original strand, 6292227 - 6292337
Alignment:
Q  89 agcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttacctaaaaaatttaatactaaatatacgttataaatggtatatagtcataaatt 188  Q
    ||||||||||  | |||| ||||| |||  ||||| ||||||||||| |  |||||| ||||| ||||||||  |||||||||||||||||| ||||||     
T  6292227 agcaaaatcgacaatcgttaaatcgcaattaaaattgatggattttatc--aaaaatataatattaaatatattttataaatggtatatagtgataaatg 6292324  T
Q  189 acttagtttataa 201  Q
    |||||| ||||||    
T  6292325 acttagattataa 6292337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 118 - 202
Target Start/End: Complemental strand, 45403247 - 45403162
Alignment:
Q  118 caaaatcgatggattttacctaaaaaatt-taatactaaatatacgttataaatggtatatagtcataaattacttagtttataag 202  Q
    |||||||||| ||||||||| |||||||  ||||| |||||||| ||||||||||||||||  |||||||| |||| ||| |||||    
T  45403247 caaaatcgatagattttaccaaaaaaataataatattaaatatatgttataaatggtatattatcataaatgacttggttgataag 45403162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 46 - 122
Target Start/End: Complemental strand, 31424518 - 31424442
Alignment:
Q  46 aaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaa 122  Q
    |||||||||||||||| |||| |||||||||||||||| ||  ||||||||||  | |||||||||| ||| |||||    
T  31424518 aaggttgtcaaaatcgagattttacttcaggtcgaaagagatgagcaaaatcgacaatcgtaaaatcgcaatcaaaa 31424442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 105 - 179
Target Start/End: Original strand, 15761257 - 15761332
Alignment:
Q  105 gtaaaatcacaaccaaaatcgatggattttacctaaa-aaatttaatactaaatatacgttataaatggtatatag 179  Q
    |||||||| ||| |||||||||||||||||||| ||| |||  |||| ||||||||| ||||||||| ||||||||    
T  15761257 gtaaaatcgcaatcaaaatcgatggattttaccaaaacaaaaataatgctaaatatatgttataaattgtatatag 15761332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 41 - 135
Target Start/End: Complemental strand, 6811178 - 6811084
Alignment:
Q  41 taaccaaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggatttta 135  Q
    |||||||||||||||||||||| | | |  ||||  ||||||| ||| ||||||||||  | |||||||||| ||||||||||||| | ||||||    
T  6811178 taaccaaggttgtcaaaatcggaactttgtttcaaatcgaaagagaagagcaaaatcgacaatcgtaaaatcgcaaccaaaatcgaagaatttta 6811084  T

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Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 153 - 202
Target Start/End: Original strand, 9212202 - 9212251
Alignment:
Q  153 taaatatacgttataaatggtatatagtcataaattacttagtttataag 202  Q
    |||||||| |||||||||||||||| ||||||||| | ||||||||||||    
T  9212202 taaatataggttataaatggtatatggtcataaatgatttagtttataag 9212251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 42 - 135
Target Start/End: Original strand, 22909975 - 22910067
Alignment:
Q  42 aaccaaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggatttta 135  Q
    ||||||||||||||||||| ||||| ||| ||| |||||||| ||| || |||||||  | |||||||||| ||||| |||| || ||||||||    
T  22909975 aaccaaggttgtcaaaatc-ggattttacatcatgtcgaaagagaagagaaaaatcgacaatcgtaaaatcgcaaccgaaattgaaggatttta 22910067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 43 - 132
Target Start/End: Complemental strand, 26879867 - 26879778
Alignment:
Q  43 accaaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggatt 132  Q
    ||||||||||||||| ||| |||| || ||||||| ||||||||  |||||||||   | |||||||||| ||| |||||| ||||||||    
T  26879867 accaaggttgtcaaagtcgtgattttagttcaggttgaaagggatcagcaaaatcaaaaatcgtaaaatcgcaatcaaaattgatggatt 26879778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 136
Target Start/End: Complemental strand, 7262086 - 7262026
Alignment:
Q  76 gtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 136  Q
    ||||||||| | ||||||||||||||||||||||||| ||| ||||||  | |||||||||    
T  7262086 gtcgaaaggaagtagcaaaatcgggactcgtaaaatcgcaatcaaaattaaaggattttac 7262026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 112
Target Start/End: Complemental strand, 23142528 - 23142462
Alignment:
Q  46 aaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatc 112  Q
    ||||||||||||||| ||| | || ||||  ||||||||||||||||||| ||| | ||||||||||    
T  23142528 aaggttgtcaaaatcaggactttatttcaattcgaaagggaatagcaaaaccggtaatcgtaaaatc 23142462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 136
Target Start/End: Complemental strand, 15294977 - 15294933
Alignment:
Q  92 aaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 136  Q
    ||||||||||||| ||||||| ||| ||||||||| |||||||||    
T  15294977 aaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttac 15294933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 136
Target Start/End: Complemental strand, 15475346 - 15475302
Alignment:
Q  92 aaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 136  Q
    ||||||||||||| ||||||| ||| ||||||||| |||||||||    
T  15475346 aaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttac 15475302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 70; Significance: 1e-31; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 105 - 202
Target Start/End: Complemental strand, 18843945 - 18843848
Alignment:
Q  105 gtaaaatcacaaccaaaatcgatggattttacctaaaaaatttaatactaaatatacgttataaatggtatatagtcataaattacttagtttataag 202  Q
    |||||||| ||| |||||||||||||||||||| |||||| ||||||||||||||| ||||||||||||||||| |||||||| ||||||||||||||    
T  18843945 gtaaaatcgcaatcaaaatcgatggattttacccaaaaaaattaatactaaatatatgttataaatggtatataatcataaatgacttagtttataag 18843848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 46 - 136
Target Start/End: Original strand, 41688441 - 41688531
Alignment:
Q  46 aaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 136  Q
    ||||||||||||||||||| | ||||| ||| ||||||||||||||||||||||||||| ||||||| ||||||||||||| |||||||||    
T  41688441 aaggttgtcaaaatcgggactttactttaggacgaaagggaatagcaaaatcgggactcctaaaatcgcaaccaaaatcgaaggattttac 41688531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 105 - 201
Target Start/End: Original strand, 23172327 - 23172423
Alignment:
Q  105 gtaaaatcacaaccaaaatcgatggattttacctaaaaaatttaatactaaatatacgttataaatggtatatagtcataaattacttagtttataa 201  Q
    |||||||| ||| ||||||||||| |||||||| |||||| |||||| |||||||| |||| ||||||||||||||||||||| |||||||||||||    
T  23172327 gtaaaatcgcaatcaaaatcgatgaattttacccaaaaaaattaatattaaatatatgttacaaatggtatatagtcataaatgacttagtttataa 23172423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 47 - 125
Target Start/End: Complemental strand, 18844068 - 18843990
Alignment:
Q  47 aggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcg 125  Q
    |||||||||||||||| | | ||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||    
T  18844068 aggttgtcaaaatcggaactttacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcgcaatcaaaatcg 18843990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 45 - 136
Target Start/End: Complemental strand, 41427774 - 41427683
Alignment:
Q  45 caaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 136  Q
    ||||||||||||||||| || | ||||||  ||||||||||| ||||||||||||||||||||||||| ||| ||||||||| |||||||||    
T  41427774 caaggttgtcaaaatcgagactttacttcgagtcgaaagggagtagcaaaatcgggactcgtaaaatcgcaatcaaaatcgaaggattttac 41427683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 46 - 136
Target Start/End: Original strand, 15051872 - 15051962
Alignment:
Q  46 aaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 136  Q
    |||||| |||||||||||| | ||||||| ||||||| ||| ||||||||||||||||||||||||| ||| ||||||||| |||||||||    
T  15051872 aaggttatcaaaatcgggactttacttcaagtcgaaaaggagtagcaaaatcgggactcgtaaaatcgcaatcaaaatcgaaggattttac 15051962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 105 - 202
Target Start/End: Complemental strand, 20321173 - 20321075
Alignment:
Q  105 gtaaaatcacaaccaaaatcgatggattttaccta-aaaaatttaatactaaatatacgttataaatggtatatagtcataaattacttagtttataag 202  Q
    |||||||| ||| |||||||||||||||||||| | ||||| |||||| |||||||| |||||||||| ||||| ||||||||| ||||||||||||||    
T  20321173 gtaaaatcgcaatcaaaatcgatggattttacccagaaaaaattaatattaaatatatgttataaatgatatatggtcataaatgacttagtttataag 20321075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 44 - 111
Target Start/End: Original strand, 6852339 - 6852406
Alignment:
Q  44 ccaaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaat 111  Q
    ||||||||||||||||||||| |  |||||||||||||||||||||||||||||||||||| ||||||    
T  6852339 ccaaggttgtcaaaatcgggacttcacttcaggtcgaaagggaatagcaaaatcgggactcataaaat 6852406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 105 - 202
Target Start/End: Complemental strand, 19579173 - 19579075
Alignment:
Q  105 gtaaaatcacaaccaaaatcgatggattttacctaaaaaatt-taatactaaatatacgttataaatggtatatagtcataaattacttagtttataag 202  Q
    |||||||| ||| |||||||||||||||||||| ||||||   |||||| ||||||| ||||| ||||||| |||||||||||| ||||||||||||||    
T  19579173 gtaaaatcgcaatcaaaatcgatggattttaccaaaaaaaaaataataccaaatatatgttatgaatggtaaatagtcataaatgacttagtttataag 19579075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 45 - 133
Target Start/End: Complemental strand, 19579299 - 19579210
Alignment:
Q  45 caaggttgtcaaaatcgggattatacttcaggtcgaaagggaat-agcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattt 133  Q
    |||||| ||||||||||||||| ||||||||||||||||||| | |||||||| ||||||| ||||||| ||| ||||||||| ||||||    
T  19579299 caaggtagtcaaaatcgggattttacttcaggtcgaaagggagtaagcaaaattgggactcataaaatcgcaatcaaaatcgaaggattt 19579210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 105 - 202
Target Start/End: Original strand, 41688565 - 41688661
Alignment:
Q  105 gtaaaatcacaaccaaaatcgatggattttacctaaaaaatttaatactaaatatacgttataaatggtatatagtcataaattacttagtttataag 202  Q
    |||||||| ||| ||||||||||| |||||||| |||||| | ||||||||||||| ||||| ||||||||||||| |||||| | ||||||||||||    
T  41688565 gtaaaatcgcaatcaaaatcgatgaattttaccaaaaaaaat-aatactaaatatatgttatgaatggtatatagttataaatgatttagtttataag 41688661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 45 - 124
Target Start/End: Original strand, 18051307 - 18051386
Alignment:
Q  45 caaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatc 124  Q
    |||||| ||||||||||||||| ||||| ||||||||||||||||| |||||||||||| ||| |||| ||| |||||||    
T  18051307 caaggtagtcaaaatcgggattttactttaggtcgaaagggaatagaaaaatcgggacttgtagaatcgcaatcaaaatc 18051386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 46 - 136
Target Start/End: Complemental strand, 20321297 - 20321207
Alignment:
Q  46 aaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 136  Q
    |||||||||||||| |||| | ||||||||||| ||| ||||||| ||||||||||||| ||||||| ||| |||||| || |||||||||    
T  20321297 aaggttgtcaaaattgggactttacttcaggtcaaaaaggaatagtaaaatcgggactcataaaatcgcaatcaaaattgaaggattttac 20321207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 106 - 202
Target Start/End: Original strand, 21059057 - 21059152
Alignment:
Q  106 taaaatcacaaccaaaatcgatggattttac--ctaaaaaatttaatactaaatatacgttataaatggtatatagtcataaattacttagtttataag 202  Q
    ||||||| ||| |||||||||||||||||||  | ||||||   ||||||||||||| |||||||||||| ||||||||||||| |||| |||||||||    
T  21059057 taaaatcgcaatcaaaatcgatggattttacaacaaaaaaa---aatactaaatatatgttataaatggtttatagtcataaatgacttcgtttataag 21059152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 147 - 202
Target Start/End: Complemental strand, 19979787 - 19979732
Alignment:
Q  147 taatactaaatatacgttataaatggtatatagtcataaattacttagtttataag 202  Q
    ||||| |||||||| |||||||||||||||||||||||||| ||||||||||||||    
T  19979787 taataataaatatatgttataaatggtatatagtcataaatgacttagtttataag 19979732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 45 - 136
Target Start/End: Original strand, 22645501 - 22645592
Alignment:
Q  45 caaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 136  Q
    ||||||||||||| |||| | | |||||| |||| ||||||||||||||||| | ||||||||||||  ||| ||||||||| |||||||||    
T  22645501 caaggttgtcaaagtcggaactttacttctggtctaaagggaatagcaaaattgagactcgtaaaattgcaatcaaaatcgaaggattttac 22645592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 45 - 136
Target Start/End: Complemental strand, 43235223 - 43235132
Alignment:
Q  45 caaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 136  Q
    ||||||||||||||| |||| | ||||||  | |||||||||||||||||||| | |||| ||||||| ||| ||||||||| |||||||||    
T  43235223 caaggttgtcaaaattgggactttacttcgagacgaaagggaatagcaaaatcagtactcataaaatcgcaatcaaaatcgaaggattttac 43235132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 105 - 202
Target Start/End: Original strand, 18051432 - 18051526
Alignment:
Q  105 gtaaaatcacaaccaaaatcgatggattttacctaaaaaatttaatactaaatatacgttataaatggtatatagtcataaattacttagtttataag 202  Q
    |||||||| ||| |||||||||||||||| ||| |||||   |||||||||||||| |||||||||  ||||| ||||||||| ||||||||||||||    
T  18051432 gtaaaatcgcaagcaaaatcgatggatttaaccaaaaaataataatactaaatatatgttataaat--tatat-gtcataaatgacttagtttataag 18051526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 46 - 136
Target Start/End: Original strand, 27339962 - 27340052
Alignment:
Q  46 aaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 136  Q
    ||||||||||||||||| | | ||||||| || ||||||||||||||||||||  | |||| ||||| ||| ||||||||| |||||||||    
T  27339962 aaggttgtcaaaatcggaactttacttcaagttgaaagggaatagcaaaatcgaaaatcgtgaaatcgcaatcaaaatcgaaggattttac 27340052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 74 - 136
Target Start/End: Original strand, 19042231 - 19042293
Alignment:
Q  74 aggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 136  Q
    ||||||||||| ||||||||||| |||||||||||||||||||  |||||||| | |||||||    
T  19042231 aggtcgaaaggaaatagcaaaatagggactcgtaaaatcacaattaaaatcgaagaattttac 19042293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 105 - 202
Target Start/End: Complemental strand, 43235098 - 43235001
Alignment:
Q  105 gtaaaatcacaaccaaaatcgatggattttacctaaaaaatttaatactaaatatacgttataaatggtatatagtcataaattacttagtttataag 202  Q
    |||||||| ||| |||||||||| ||||||||| ||| |   ||||| ||| |||| |||||||||||| ||||| ||||||| |||||||| |||||    
T  43235098 gtaaaatcgcaatcaaaatcgattgattttaccaaaagataataatagtaagtatatgttataaatggtttatagacataaatgacttagttgataag 43235001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 46 - 136
Target Start/End: Complemental strand, 19377957 - 19377867
Alignment:
Q  46 aaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 136  Q
    |||||||||||| || | | | ||||| | || |||||||||||||||||||| || ||||||| | |||| ||||||||| |||||||||    
T  19377957 aaggttgtcaaagtcagtactttactttaagtggaaagggaatagcaaaatcgagaatcgtaaatttacaatcaaaatcgaaggattttac 19377867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 105 - 167
Target Start/End: Original strand, 38158163 - 38158224
Alignment:
Q  105 gtaaaatcacaaccaaaatcgatggattttacctaaaaaatttaatactaaatatacgttata 167  Q
    |||||||||||| |||||| ||||||||||||| ||||||  |||||||||||||| ||||||    
T  38158163 gtaaaatcacaatcaaaattgatggattttacc-aaaaaaaataatactaaatatatgttata 38158224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 45 - 94
Target Start/End: Original strand, 23172218 - 23172267
Alignment:
Q  45 caaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaa 94  Q
    |||||||||||||||||| | | |||||||||| ||||||||||||||||    
T  23172218 caaggttgtcaaaatcggaactttacttcaggttgaaagggaatagcaaa 23172267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 46 - 98
Target Start/End: Complemental strand, 26021665 - 26021613
Alignment:
Q  46 aaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcg 98  Q
    ||||||||||||||||||||| | ||||||| | |||||||| ||||||||||    
T  26021665 aaggttgtcaaaatcgggattttgcttcaggccaaaagggaagagcaaaatcg 26021613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 96
Target Start/End: Original strand, 13341471 - 13341522
Alignment:
Q  45 caaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaat 96  Q
    |||||||||||||||||||||| | |||||  |||||||||||||| |||||    
T  13341471 caaggttgtcaaaatcgggattttgcttcaaatcgaaagggaatagaaaaat 13341522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 120 - 183
Target Start/End: Original strand, 19042341 - 19042404
Alignment:
Q  120 aaatcgatggattttacctaaaaaatttaatactaaatatacgttataaatggtatatagtcat 183  Q
    |||| ||||||||||| | |||||  ||||||||||||||| |||| |||| ||||||||||||    
T  19042341 aaattgatggattttatccaaaaagattaatactaaatatatgttagaaattgtatatagtcat 19042404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 187
Target Start/End: Complemental strand, 26021551 - 26021468
Alignment:
Q  103 tcgtaaaatcacaaccaaaatcgatggattttacctaaaaaatt-taatactaaatatacgttataaatggtatatagtcataaat 187  Q
    ||||||||||||||  |||  ||||| |||||||| ||| |||  |||| ||||||||| ||||||||| ||||||||||||||||    
T  26021551 tcgtaaaatcacaattaaa--cgatgcattttaccaaaacaataataatgctaaatatatgttataaattgtatatagtcataaat 26021468  T

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Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 87 - 183
Target Start/End: Original strand, 15051985 - 15052081
Alignment:
Q  87 atagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttacctaaa-aaatttaatactaaatatacgttataaatggtatatagtcat 183  Q
    |||||||| |||| |||||||||||| ||| ||||||||| ||||| |||| ||| |||  ||||  |||||||| ||||||||| | ||||||||||    
T  15051985 atagcaaagtcggaactcgtaaaatcgcaatcaaaatcga-ggattctaccaaaacaaaaataatgttaaatatatgttataaattgcatatagtcat 15052081  T

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Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 87 - 132
Target Start/End: Complemental strand, 15446447 - 15446402
Alignment:
Q  87 atagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggatt 132  Q
    ||||||||||||  |||||||||||| ||| |||||||||||||||    
T  15446447 atagcaaaatcgaaactcgtaaaatcgcaatcaaaatcgatggatt 15446402  T

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Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 49 - 98
Target Start/End: Complemental strand, 29270374 - 29270325
Alignment:
Q  49 gttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcg 98  Q
    |||||||||||||||||| || |||||||| |||| ||||| ||||||||    
T  29270374 gttgtcaaaatcgggattttatttcaggtcaaaagagaatatcaaaatcg 29270325  T

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Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 103 - 187
Target Start/End: Original strand, 43005756 - 43005841
Alignment:
Q  103 tcgtaaaatcacaaccaaaatcgatggattttacctaaa-aaatttaatactaaatatacgttataaatggtatatagtcataaat 187  Q
    |||||||||| |||  |||||||||||||| |||| ||| |||  |||| ||||||||| ||||||||| ||||| | ||||||||    
T  43005756 tcgtaaaatcgcaattaaaatcgatggattgtaccaaaacaaaaataatgctaaatatatgttataaattgtatacactcataaat 43005841  T

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Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 98
Target Start/End: Complemental strand, 19979922 - 19979870
Alignment:
Q  46 aaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcg 98  Q
    ||||| ||||||||||||||| | ||||||||| |||| ||| ||||||||||    
T  19979922 aaggtggtcaaaatcgggattttgcttcaggtcaaaagagaagagcaaaatcg 19979870  T

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Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 86
Target Start/End: Complemental strand, 34703022 - 34702982
Alignment:
Q  46 aaggttgtcaaaatcgggattatacttcaggtcgaaaggga 86  Q
    |||||||||||||||| |||| ||||||| |||||||||||    
T  34703022 aaggttgtcaaaatcgagattttacttcaagtcgaaaggga 34702982  T

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Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 103 - 139
Target Start/End: Complemental strand, 43234997 - 43234961
Alignment:
Q  103 tcgtaaaatcacaaccaaaatcgatggattttaccta 139  Q
    |||||||||||||| ||||||||||||||||| ||||    
T  43234997 tcgtaaaatcacaatcaaaatcgatggatttttccta 43234961  T

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Target: chr1 (Bit Score: 70; Significance: 1e-31; HSPs: 48)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 105 - 202
Target Start/End: Original strand, 9351962 - 9352059
Alignment:
Q  105 gtaaaatcacaaccaaaatcgatggattttacctaaaaaatttaatactaaatatacgttataaatggtatatagtcataaattacttagtttataag 202  Q
    |||||||||||| ||||||||||| |||||||| |||||| ||||||||||||||| ||||||||||||||||||||| |||| ||||||||||||||    
T  9351962 gtaaaatcacaatcaaaatcgatgaattttacccaaaaaaattaatactaaatatatgttataaatggtatatagtcaaaaatgacttagtttataag 9352059  T

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Target: chr1; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 107 - 202
Target Start/End: Original strand, 25146670 - 25146765
Alignment:
Q  107 aaaatcacaaccaaaatcgatggattttacctaaaaaatttaatactaaatatacgttataaatggtatatagtcataaattacttagtttataag 202  Q
    |||||| ||| |||||||||||||||||||| |||||| || |||||||||||||||||||||| |||||||||||||||| ||||||||||||||    
T  25146670 aaaatcgcaatcaaaatcgatggattttacccaaaaaaattgatactaaatatacgttataaattgtatatagtcataaataacttagtttataag 25146765  T

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Target: chr1; HSP #3
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 105 - 202
Target Start/End: Original strand, 18304710 - 18304807
Alignment:
Q  105 gtaaaatcacaaccaaaatcgatggattttacctaaaaaatttaatactaaatatacgttataaatggtatatagtcataaattacttagtttataag 202  Q
    |||||||| ||| |||||||||||||||||| | |||||| ||||||||||||||||||||| |||||||||||||||||||| |||||| |||||||    
T  18304710 gtaaaatcgcaatcaaaatcgatggattttatcaaaaaaaattaatactaaatatacgttatgaatggtatatagtcataaatgacttagcttataag 18304807  T

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Target: chr1; HSP #4
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 105 - 202
Target Start/End: Original strand, 42179963 - 42180061
Alignment:
Q  105 gtaaaatcacaaccaaaatcgatggattttacctaaaaaatt-taatactaaatatacgttataaatggtatatagtcataaattacttagtttataag 202  Q
    |||||| ||||| |||||||||||||||||||| |||||| | |||||||| ||||| |||||||||||||||||||||||||| ||||||||||||||    
T  42179963 gtaaaaccacaatcaaaatcgatggattttaccaaaaaaaatataatactatatatatgttataaatggtatatagtcataaatgacttagtttataag 42180061  T

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Target: chr1; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 46 - 136
Target Start/End: Original strand, 14074258 - 14074348
Alignment:
Q  46 aaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 136  Q
    ||||||||||||||| ||| | ||||||||||||||||||||||||||||| || |||| ||||||||||| ||||||||| |||||||||    
T  14074258 aaggttgtcaaaatcaggactttacttcaggtcgaaagggaatagcaaaattggaactcataaaatcacaatcaaaatcgaaggattttac 14074348  T

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Target: chr1; HSP #6
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 47 - 136
Target Start/End: Original strand, 21846050 - 21846139
Alignment:
Q  47 aggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 136  Q
    |||||||||||||| ||| | |||| |||||||||||||||||||||||||||||||| ||||||| ||| ||||||||| |||||||||    
T  21846050 aggttgtcaaaatcaggactttactccaggtcgaaagggaatagcaaaatcgggactcttaaaatcgcaatcaaaatcgaaggattttac 21846139  T

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Target: chr1; HSP #7
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 105 - 202
Target Start/End: Complemental strand, 23528886 - 23528789
Alignment:
Q  105 gtaaaatcacaaccaaaatcgatggattttacctaaaaaatttaatactaaatatacgttataaatggtatatagtcataaattacttagtttataag 202  Q
    |||||||| ||| |||||||||||||||||||| || ||   ||||| ||||||||||||||||||||||||||||||||||| |||| |||||||||    
T  23528886 gtaaaatcgcaatcaaaatcgatggattttacccaataataataataataaatatacgttataaatggtatatagtcataaatgacttcgtttataag 23528789  T

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Target: chr1; HSP #8
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 43 - 136
Target Start/End: Original strand, 25146540 - 25146633
Alignment:
Q  43 accaaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 136  Q
    |||||||||||||||||| ||| | |||||||||| ||||||||||||||||||||| | |||||||||| ||| ||||||||| |||||||||    
T  25146540 accaaggttgtcaaaatcaggactttacttcaggttgaaagggaatagcaaaatcggaaatcgtaaaatcgcaatcaaaatcgaaggattttac 25146633  T

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Target: chr1; HSP #9
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 106 - 202
Target Start/End: Complemental strand, 13100419 - 13100324
Alignment:
Q  106 taaaatcacaaccaaaatcgatggattttacctaaaaaatttaatactaaatatacgttataaatggtatatagtcataaattacttagtttataag 202  Q
    ||||||| ||| |||||||||||||||||||| |||||||  ||||||||||||| |||| ||||||||||||||||||||| |||| |||||||||    
T  13100419 taaaatcgcaatcaaaatcgatggattttacccaaaaaata-aatactaaatatatgttacaaatggtatatagtcataaatgacttggtttataag 13100324  T

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Target: chr1; HSP #10
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 54 - 137
Target Start/End: Original strand, 9954816 - 9954899
Alignment:
Q  54 caaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttacc 137  Q
    ||||||||| | | ||||| ||||||||||||||||||||||||||||||||||||||| ||| ||||||||| ||||||||||    
T  9954816 caaaatcggaactttacttaaggtcgaaagggaatagcaaaatcgggactcgtaaaatcgcaatcaaaatcgaaggattttacc 9954899  T

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Target: chr1; HSP #11
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 45 - 136
Target Start/End: Complemental strand, 13100545 - 13100454
Alignment:
Q  45 caaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 136  Q
    |||||||||||||||||||| | ||||||| ||||||||||||| |||||||||| |||||||||||| ||| ||||||| | |||||||||    
T  13100545 caaggttgtcaaaatcgggactttacttcaagtcgaaagggaatggcaaaatcggaactcgtaaaatcgcaatcaaaatcaaaggattttac 13100454  T

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Target: chr1; HSP #12
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 119 - 202
Target Start/End: Complemental strand, 47786074 - 47785992
Alignment:
Q  119 aaaatcgatggattttacctaaaaaatttaatactaaatatacgttataaatggtatatagtcataaattacttagtttataag 202  Q
    |||||||||||||||||||  ||||| | ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||    
T  47786074 aaaatcgatggattttaccacaaaaaat-aatactaaatatatgttataaatggtatatagtcataaatgacttagtttataag 47785992  T

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Target: chr1; HSP #13
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 45 - 135
Target Start/End: Original strand, 9351837 - 9351927
Alignment:
Q  45 caaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggatttta 135  Q
    ||||||||||||||||  || | |||||||||||||||| |||||||||||||||||||||||||||| ||| ||||||||  ||||||||    
T  9351837 caaggttgtcaaaatcaagactttacttcaggtcgaaagcgaatagcaaaatcgggactcgtaaaatcgcaatcaaaatcgtaggatttta 9351927  T

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Target: chr1; HSP #14
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 48 - 136
Target Start/End: Original strand, 16125232 - 16125320
Alignment:
Q  48 ggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 136  Q
    |||||| |||||||| | | ||||||||||||||||||||||| ||||| ||||||||||||||| ||| ||||||||| |||||||||    
T  16125232 ggttgttaaaatcggaactttacttcaggtcgaaagggaatagtaaaattgggactcgtaaaatcgcaatcaaaatcgaaggattttac 16125320  T

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Target: chr1; HSP #15
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 105 - 201
Target Start/End: Original strand, 16125354 - 16125450
Alignment:
Q  105 gtaaaatcacaaccaaaatcgatggattttacctaaaaaatttaatactaaatatacgttataaatggtatatagtcataaattacttagtttataa 201  Q
    |||||||| ||| |||||||||||||  ||||| |||||   |||||||||||||| ||||||||||||||||| |||||||| |||||||||||||    
T  16125354 gtaaaatcgcaatcaaaatcgatggacgttacccaaaaataataatactaaatatatgttataaatggtatatattcataaatgacttagtttataa 16125450  T

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Target: chr1; HSP #16
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 48 - 136
Target Start/End: Original strand, 17197306 - 17197394
Alignment:
Q  48 ggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 136  Q
    |||| |||||||||||| | ||||||| ||||||||||| |||||||||||| |||||||||||| |||| |||||||| |||||||||    
T  17197306 ggttatcaaaatcgggactttacttcaagtcgaaagggagtagcaaaatcggaactcgtaaaatcgcaactaaaatcgaaggattttac 17197394  T

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Target: chr1; HSP #17
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 105 - 202
Target Start/End: Original strand, 9954932 - 9955031
Alignment:
Q  105 gtaaaatcacaaccaaaatcgatggattttacctaaaaaatt--taatactaaatatacgttataaatggtatatagtcataaattacttagtttataag 202  Q
    |||||||| ||| ||| |||||||||||||||  |||||| |  ||||||| |||||| |||||||||||||||||||||||||| || |||||||||||    
T  9954932 gtaaaatcgcaatcaagatcgatggattttacacaaaaaaataataatactgaatatatgttataaatggtatatagtcataaatgacctagtttataag 9955031  T

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Target: chr1; HSP #18
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 68 - 136
Target Start/End: Original strand, 19009745 - 19009813
Alignment:
Q  68 tacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 136  Q
    |||||||| |||||||||||||||||||||||||||||||||||| ||| ||||||| | |||||||||    
T  19009745 tacttcagatcgaaagggaatagcaaaatcgggactcgtaaaatcgcaatcaaaatcaaaggattttac 19009813  T

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Target: chr1; HSP #19
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 45 - 136
Target Start/End: Original strand, 17055694 - 17055784
Alignment:
Q  45 caaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 136  Q
    |||||||||||||||||||  | ||||| |||||||||||| || | ||||||||||||||||||||| ||| ||||||||| |||||||||    
T  17055694 caaggttgtcaaaatcgggtctttactt-aggtcgaaaggggattgtaaaatcgggactcgtaaaatcgcaatcaaaatcgaaggattttac 17055784  T

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Target: chr1; HSP #20
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 45 - 136
Target Start/End: Original strand, 17869524 - 17869615
Alignment:
Q  45 caaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 136  Q
    |||| ||||||||||||||| | || |||||||| |||||||| |||||||||||||| ||||||||| ||| ||||||| | |||||||||    
T  17869524 caagattgtcaaaatcgggactctaattcaggtcaaaagggaagagcaaaatcgggacacgtaaaatcgcaatcaaaatcaaaggattttac 17869615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 105 - 202
Target Start/End: Complemental strand, 12513508 - 12513414
Alignment:
Q  105 gtaaaatcacaaccaaaatcgatggattttacctaaaaaatttaatactaaatatacgttataaatggtatatagtcataaattacttagtttataag 202  Q
    |||||||| ||| |||||||||| ||||||||| ||||||| ||||| |||||||  |||||| ||||||||||||| ||||| ||||||||||||||    
T  12513508 gtaaaatcgcaatcaaaatcgatagattttacc-aaaaaatataatattaaatat--gttatatatggtatatagtcgtaaatgacttagtttataag 12513414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 85 - 193
Target Start/End: Original strand, 12002751 - 12002859
Alignment:
Q  85 gaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttacctaaa-aaatttaatactaaatatacgttataaatggtatatagtcat 183  Q
    |||||||||||||||||||||||||||| ||| ||||||| | ||||| |||| ||| |||  |||| ||||||||| ||||||||| | ||||||||||    
T  12002751 gaatagcaaaatcgggactcgtaaaatcgcaatcaaaatc-aaggattctaccaaaacaaaaataatgctaaatatatgttataaattgcatatagtcat 12002849  T
Q  184 aaattactta 193  Q
    |||| |||||    
T  12002850 aaatgactta 12002859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 105 - 202
Target Start/End: Original strand, 13276165 - 13276262
Alignment:
Q  105 gtaaaatcacaaccaaaatcgatggattttacctaaaaaatttaatactaaatatacgttataaatggtatatagtcataaattacttagtttataag 202  Q
    |||||||  ||| ||||||||||||| | |||| |||||   |||||||||||||| |||||||||| ||||||||||||||| ||||| ||||||||    
T  13276165 gtaaaattgcaatcaaaatcgatggactataccaaaaaataataatactaaatatatgttataaatgatatatagtcataaatgacttaatttataag 13276262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 80 - 136
Target Start/End: Original strand, 9128647 - 9128703
Alignment:
Q  80 aaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 136  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||| |||||||||    
T  9128647 aaagggaatagcaaaatcgggactcgtaaaatcacgatcaaaatcgaaggattttac 9128703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 105 - 202
Target Start/End: Original strand, 9327113 - 9327211
Alignment:
Q  105 gtaaaatcacaaccaaaatcgatggattttacctaaaaaatttaatactaaatatacgttataaatggtatatagtc--ataaattacttagtttataag 202  Q
    |||||||| ||| ||||||||||| |||||||| |||||| | |||||||||||||  |||||||||||||||||||  | |||| ||||||||||||||    
T  9327113 gtaaaatcgcaatcaaaatcgatgaattttacccaaaaaaat-aatactaaatatatattataaatggtatatagtcaaaaaaatgacttagtttataag 9327211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 48 - 136
Target Start/End: Complemental strand, 47786209 - 47786122
Alignment:
Q  48 ggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 136  Q
    ||||||||||||||||||| | ||| |||| ||||| ||| ||||||||||  | |||||||||||||||||||||||| |||||||||    
T  47786209 ggttgtcaaaatcgggatttt-ctttaggttgaaagagaagagcaaaatcgacaatcgtaaaatcacaaccaaaatcgaaggattttac 47786122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 45 - 99
Target Start/End: Original strand, 9954770 - 9954824
Alignment:
Q  45 caaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgg 99  Q
    |||||||||||||||||||| | ||||| ||||||||||||||||||||||||||    
T  9954770 caaggttgtcaaaatcgggactttacttaaggtcgaaagggaatagcaaaatcgg 9954824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 105 - 187
Target Start/End: Original strand, 21846173 - 21846255
Alignment:
Q  105 gtaaaatcacaaccaaaatcgatggattttacctaaaaaatttaatactaaatatacgttataaatggtatatagtcataaat 187  Q
    |||||||| ||| |||||| |||| |||||||| |||||| ||||||||||||||| |||||||||  |||||||| ||||||    
T  21846173 gtaaaatcgcaatcaaaatagatgaattttacccaaaaaaattaatactaaatatatgttataaattatatatagttataaat 21846255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 42 - 136
Target Start/End: Complemental strand, 30619298 - 30619206
Alignment:
Q  42 aaccaaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 136  Q
    ||||||||||||||||||||||||| | |||||||||||||| ||| ||||||||||  | |||| ||||| |||| |||||||| |||||||||    
T  30619298 aaccaaggttgtcaaaatcgggatt-ttcttcaggtcgaaagagaagagcaaaatcgacaatcgt-aaatcgcaacaaaaatcgaaggattttac 30619206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 44 - 136
Target Start/End: Original strand, 41032546 - 41032638
Alignment:
Q  44 ccaaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 136  Q
    |||||||||||||||| |||||| |||||||||| ||||| ||| |||||||| |  | |||||||||| |||| |||||||| | |||||||    
T  41032546 ccaaggttgtcaaaatagggattttacttcaggttgaaagagaagagcaaaattgataatcgtaaaatcgcaactaaaatcgaagaattttac 41032638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 147 - 202
Target Start/End: Original strand, 9128781 - 9128836
Alignment:
Q  147 taatactaaatatacgttataaatggtatatagtcataaattacttagtttataag 202  Q
    |||||||||| ||| ||||||||||||||||||||| |||| ||||||||||||||    
T  9128781 taatactaaagatatgttataaatggtatatagtcaaaaataacttagtttataag 9128836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 45 - 136
Target Start/End: Complemental strand, 12513626 - 12513535
Alignment:
Q  45 caaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 136  Q
    ||||||||||||||| |||||| | ||||||||| |||| ||| ||||||||||  | | |||||||| ||||||||||| | |||||||||    
T  12513626 caaggttgtcaaaattgggattttgcttcaggtcaaaagagaagagcaaaatcgacaattgtaaaatcgcaaccaaaatcaaaggattttac 12513535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 45 - 136
Target Start/End: Complemental strand, 23529011 - 23528920
Alignment:
Q  45 caaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 136  Q
    |||||||||||||||||| | | || |||||||  ||| |||| || || |||||||||||||||||| ||| ||||||||| |||||||||    
T  23529011 caaggttgtcaaaatcggaactttatttcaggttaaaaaggaacagtaagatcgggactcgtaaaatcgcaatcaaaatcgaaggattttac 23528920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 148 - 202
Target Start/End: Complemental strand, 32881514 - 32881460
Alignment:
Q  148 aatactaaatatacgttataaatggtatatagtcataaattacttagtttataag 202  Q
    ||||||||||||| |||||||||||||||||||||| ||| ||||| ||||||||    
T  32881514 aatactaaatatatgttataaatggtatatagtcatgaatgacttaatttataag 32881460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 45 - 135
Target Start/End: Original strand, 42179845 - 42179935
Alignment:
Q  45 caaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggatttta 135  Q
    |||||||||||||||| | | | |||||| |||  ||||||||||||| |||||  |||||||||||| ||| ||||||||| ||||||||    
T  42179845 caaggttgtcaaaatcagaaatttacttcgggttaaaagggaatagcataatcgaaactcgtaaaatcgcaatcaaaatcgaaggatttta 42179935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 48 - 136
Target Start/End: Original strand, 12002638 - 12002724
Alignment:
Q  48 ggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 136  Q
    ||||||||||||||||| | || || | ||||||||||| ||||||||| |||||||  ||||||||||  |||||||| |||||||||    
T  12002638 ggttgtcaaaatcgggactttaatttaagtcgaaagggagtagcaaaattgggactc--aaaatcacaataaaaatcgaaggattttac 12002724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 41 - 112
Target Start/End: Original strand, 13276029 - 13276097
Alignment:
Q  41 taaccaaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatc 112  Q
    |||||||| ||||||||||||||| | ||||   ||||||||| ||||||||||||| ||||||||||||||    
T  13276029 taaccaagattgtcaaaatcgggactttact---ggtcgaaagagaatagcaaaatcaggactcgtaaaatc 13276097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 105 - 198
Target Start/End: Original strand, 17869649 - 17869742
Alignment:
Q  105 gtaaaatcacaaccaaaatcgatggattttacctaaaaaatttaatactaaatatacgttataaatggtatatagtcataaattacttagttta 198  Q
    |||||||| ||| ||||||||||| |||||||| |||||   |||||||||||||| ||| ||||| |||||| || |||||  ||||||||||    
T  17869649 gtaaaatcgcaatcaaaatcgatgaattttaccaaaaaataataatactaaatatatgttgtaaatagtatatggttataaaagacttagttta 17869742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 68 - 135
Target Start/End: Original strand, 9321532 - 9321599
Alignment:
Q  68 tacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggatttta 135  Q
    |||||||||| ||||   |||||||||||||| |||||||||||| ||| ||||||||| ||||||||    
T  9321532 tacttcaggtagaaaaaaaatagcaaaatcggaactcgtaaaatcgcaatcaaaatcgaaggatttta 9321599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 136
Target Start/End: Complemental strand, 16434864 - 16434773
Alignment:
Q  45 caaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 136  Q
    |||| ||||||||||| ||||| | ||  ||||| |||||||||||||||||||  | |||||||||  ||| ||||||||| |||||||||    
T  16434864 caagattgtcaaaatcaggatttttctctaggtcaaaagggaatagcaaaatcgaaaatcgtaaaattgcaatcaaaatcgaaggattttac 16434773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 202
Target Start/End: Complemental strand, 18228380 - 18228333
Alignment:
Q  155 aatatacgttataaatggtatatagtcataaattacttagtttataag 202  Q
    |||||| |||||||||||||||||||||||||| ||||| ||||||||    
T  18228380 aatatatgttataaatggtatatagtcataaataacttaatttataag 18228333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 136
Target Start/End: Original strand, 27502129 - 27502220
Alignment:
Q  45 caaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 136  Q
    |||||||||||||||||||| | ||||||| ||| | |  ||||||||||| || ||||| ||||||  ||| ||||||||| |||||||||    
T  27502129 caaggttgtcaaaatcgggaatttacttcaagtcaacatagaatagcaaaaccgagactcataaaattgcaatcaaaatcgaaggattttac 27502220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 105 - 202
Target Start/End: Original strand, 19009847 - 19009942
Alignment:
Q  105 gtaaaatcacaaccaaaatcgatggattttacctaaaaaatttaatactaaatatacgttataaatggtatatagtcataaattacttagtttataag 202  Q
    |||||||| ||| |||||||  |||||||||||  |||||   |||| |||||||  ||||||||||||||||||| |||||| ||||| ||||||||    
T  19009847 gtaaaatcgcaatcaaaatcattggattttaccccaaaaaaaaaatattaaatat--gttataaatggtatatagttataaatgacttaatttataag 19009942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 45 - 98
Target Start/End: Original strand, 18304592 - 18304645
Alignment:
Q  45 caaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcg 98  Q
    |||||||||||||||||||| |  |||||||||||||||| || ||||||||||    
T  18304592 caaggttgtcaaaatcgggacttcacttcaggtcgaaaggaaaaagcaaaatcg 18304645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 136
Target Start/End: Complemental strand, 22789543 - 22789447
Alignment:
Q  40 ctaaccaaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 136  Q
    |||| ||||| ||| || ||| |||||  |||||||||| ||||||| ||| |||||||  | |||||||||||||| ||||||| | |||||||||    
T  22789543 ctaagcaaggatgttaatatcaggatttgacttcaggtcaaaagggattagaaaaatcgcaaatcgtaaaatcacaatcaaaatcaaaggattttac 22789447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 136
Target Start/End: Complemental strand, 32881672 - 32881584
Alignment:
Q  48 ggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 136  Q
    |||| |||||||||||||| | |||||| | ||||| ||| ||||||||||  | |||||||||| ||||  ||||||| |||||||||    
T  32881672 ggttttcaaaatcgggattttgcttcagattgaaagagaaaagcaaaatcgacaatcgtaaaatcgcaactgaaatcgaaggattttac 32881584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 41 - 136
Target Start/End: Complemental strand, 8773624 - 8773532
Alignment:
Q  41 taaccaaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 136  Q
    |||||||||  |||||||||| || | ||||| | ||||||||||||||||| |||   ||||||||||||| |||  ||||| || |||||||||    
T  8773624 taaccaaggaggtcaaaatcgagactttacttaaagtcgaaagggaatagcagaat---gactcgtaaaatcgcaattaaaattgaaggattttac 8773532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 137
Target Start/End: Original strand, 18337135 - 18337223
Alignment:
Q  50 ttgtcaaaatcgggattatacttcaggtcg-aaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttacc 137  Q
    |||| |||||||||||| | |||||||||| |||||||| |||||||| |  | | |||||||  |||  |||||||||||||||||||    
T  18337135 ttgtaaaaatcgggattttgcttcaggtcgaaaagggaaaagcaaaattgaaaatagtaaaattgcaattaaaatcgatggattttacc 18337223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 68; Significance: 2e-30; HSPs: 33)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 45 - 136
Target Start/End: Complemental strand, 9770467 - 9770376
Alignment:
Q  45 caaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 136  Q
    |||||||||||||||||||| | ||||| ||||||||||||||||||||||||||||||||||||||| ||| ||||||||| |||||||||    
T  9770467 caaggttgtcaaaatcgggactttactttaggtcgaaagggaatagcaaaatcgggactcgtaaaatcgcaatcaaaatcgaaggattttac 9770376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 105 - 202
Target Start/End: Complemental strand, 5375895 - 5375797
Alignment:
Q  105 gtaaaatcacaaccaaaatcgatggattttacctaaaaaat-ttaatactaaatatacgttataaatggtatatagtcataaattacttagtttataag 202  Q
    |||||||||||| |||||||||||||||||||| ||||||  ||||||||||||||| |||||||||| ||||| ||||||||| ||||||||||||||    
T  5375895 gtaaaatcacaatcaaaatcgatggattttacccaaaaaaaattaatactaaatatatgttataaatgatatatggtcataaatgacttagtttataag 5375797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 105 - 202
Target Start/End: Complemental strand, 9770342 - 9770245
Alignment:
Q  105 gtaaaatcacaaccaaaatcgatggattttacctaaaaaatttaatactaaatatacgttataaatggtatatagtcataaattacttagtttataag 202  Q
    |||||||| ||| ||||||||||| |||||||| |||||| ||||||||||||||| ||||| |||||||||||||||||| | ||||||||||||||    
T  9770342 gtaaaatcgcaatcaaaatcgatgaattttacccaaaaaaattaatactaaatatatgttatgaatggtatatagtcataagtaacttagtttataag 9770245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 105 - 202
Target Start/End: Original strand, 9911310 - 9911407
Alignment:
Q  105 gtaaaatcacaaccaaaatcgatggattttacctaaaaaatttaatactaaatatacgttataaatggtatatagtcataaattacttagtttataag 202  Q
    |||||||| ||| ||||||||||||| |||||| |||||   ||||||| |||||| |||||||||||||||||||||||||| ||||||||||||||    
T  9911310 gtaaaatcgcaatcaaaatcgatggactttaccaaaaaataataatacttaatatatgttataaatggtatatagtcataaatgacttagtttataag 9911407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 43 - 136
Target Start/End: Original strand, 6346727 - 6346820
Alignment:
Q  43 accaaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 136  Q
    |||||||||||||||||||| | | | |||||||||||||||||| ||||||||||  | |||||||||||||| ||||||||| |||||||||    
T  6346727 accaaggttgtcaaaatcggaaatttgcttcaggtcgaaagggaagagcaaaatcgaaaatcgtaaaatcacaatcaaaatcgaaggattttac 6346820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 105 - 202
Target Start/End: Complemental strand, 36121053 - 36120957
Alignment:
Q  105 gtaaaatcacaaccaaaatcgatggattttacctaaaaaatttaatactaaatatacgttataaatggtatatagtcataaattacttagtttataag 202  Q
    |||||||| ||| |||||||||||||||||||| |||| | | |||||||||||||  ||||||||||||||||||||||||| ||||||| ||||||    
T  36121053 gtaaaatcgcaatcaaaatcgatggattttaccaaaaataat-aatactaaatatattttataaatggtatatagtcataaatgacttagtatataag 36120957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 47 - 135
Target Start/End: Original strand, 23064737 - 23064825
Alignment:
Q  47 aggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggatttta 135  Q
    |||||||||||||||||| | |||||||||||||||||||||| | ||||||| |||||||||||| ||| |||||| || ||||||||    
T  23064737 aggttgtcaaaatcgggactttacttcaggtcgaaagggaataacgaaatcggaactcgtaaaatcgcaatcaaaattgaaggatttta 23064825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 139 - 201
Target Start/End: Complemental strand, 13023766 - 13023704
Alignment:
Q  139 aaaaaatttaatactaaatatacgttataaatggtatatagtcataaattacttagtttataa 201  Q
    |||||| ||||||||||||||| |||||||||||||||||||||||||| |||||||||||||    
T  13023766 aaaaaaattaatactaaatatatgttataaatggtatatagtcataaatgacttagtttataa 13023704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 105 - 199
Target Start/End: Complemental strand, 17466309 - 17466215
Alignment:
Q  105 gtaaaatcacaaccaaaatcgatggattttacctaaaaaatttaatactaaatatacgttataaatggtatatagtcataaattacttagtttat 199  Q
    |||||||  ||| |||||||||||||||||||   |||||  ||||| |||||||| |||||||||||||||||||||||||| |||||||||||    
T  17466309 gtaaaattgcaatcaaaatcgatggattttacaacaaaaaaataatattaaatatatgttataaatggtatatagtcataaatgacttagtttat 17466215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 43 - 136
Target Start/End: Complemental strand, 5376022 - 5375929
Alignment:
Q  43 accaaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 136  Q
    ||||||||||||||||| |||| | ||||||||||| |||   ||||| ||||||||||||||||||||| ||| ||||||||| |||||||||    
T  5376022 accaaggttgtcaaaattgggactttacttcaggtcaaaaataaatagtaaaatcgggactcgtaaaatcgcaatcaaaatcgaaggattttac 5375929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 45 - 136
Target Start/End: Complemental strand, 55476343 - 55476252
Alignment:
Q  45 caaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 136  Q
    ||||||| |||||||||||| | ||||||| ||||||||||| ||  |||||||| |||||||||||| ||| ||||||||| |||||||||    
T  55476343 caaggttatcaaaatcgggactttacttcaagtcgaaagggagtaataaaatcggtactcgtaaaatcgcaatcaaaatcgaaggattttac 55476252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 103 - 202
Target Start/End: Original strand, 5361862 - 5361959
Alignment:
Q  103 tcgtaaaatcacaaccaaaatcgatggattttacctaaaaaatttaatactaaatatacgttataaatggtatatagtcataaattacttagtttataag 202  Q
    |||||||||| ||| |||| ||||||||||| ||| ||| ||   ||||||||||||| |||| |||||||||||| |||||||| ||||||||||||||    
T  5361862 tcgtaaaatcgcaatcaaagtcgatggatttgaccaaaagaaa--aatactaaatatatgttaaaaatggtatataatcataaatgacttagtttataag 5361959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 45 - 136
Target Start/End: Complemental strand, 7045299 - 7045208
Alignment:
Q  45 caaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 136  Q
    ||||||||||||||| || ||| |||||||||||||||||||| |||||||||   | || ||||||| ||| ||||||||| |||||||||    
T  7045299 caaggttgtcaaaataggaattttacttcaggtcgaaagggaagagcaaaatcaaaaatcataaaatcgcaatcaaaatcgaaggattttac 7045208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 81 - 136
Target Start/End: Original strand, 8010946 - 8011001
Alignment:
Q  81 aagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 136  Q
    |||||||||||||||||||||||||||||||| ||| ||||||||| |||||||||    
T  8010946 aagggaatagcaaaatcgggactcgtaaaatcgcaatcaaaatcgaaggattttac 8011001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 105 - 202
Target Start/End: Complemental strand, 8889456 - 8889361
Alignment:
Q  105 gtaaaatcacaaccaaaatcgatggattttacctaaaaaatttaatactaaatatacgttataaatggtatatagtcataaattacttagtttataag 202  Q
    |||||||| ||| ||||||||||| |||||||| | ||||   |||||||||||||  ||||||||||||||||||||||||  |||| |||||||||    
T  8889456 gtaaaatcgcaatcaaaatcgatgaattttaccaacaaaaa--aatactaaatatatattataaatggtatatagtcataaacgacttggtttataag 8889361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 46 - 136
Target Start/End: Complemental strand, 36121177 - 36121087
Alignment:
Q  46 aaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 136  Q
    ||||||||||||||||||  | ||||||| || |||||||||||||  |||||||||||||||||||  || |||||||||  ||||||||    
T  36121177 aaggttgtcaaaatcgggtctttacttcaagttgaaagggaatagcttaatcgggactcgtaaaatcggaatcaaaatcgaaagattttac 36121087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 46 - 136
Target Start/End: Original strand, 9911186 - 9911276
Alignment:
Q  46 aaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 136  Q
    |||| |||||||||  ||| | |||||||  |||||||||||||| ||||||||||||||||||||| |||  |||| ||| |||||||||    
T  9911186 aagggtgtcaaaattaggactttacttcatatcgaaagggaatagtaaaatcgggactcgtaaaatcgcaataaaaaacgaaggattttac 9911276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 105 - 202
Target Start/End: Complemental strand, 10143130 - 10143032
Alignment:
Q  105 gtaaaatcacaaccaaaatcgatggattttacctaaaaaatt-taatactaaatatacgttataaatggtatatagtcataaattacttagtttataag 202  Q
    |||||||| ||| |||||| ||||||||||| | ||||||   ||||||||||||||  |||||| |||||||||||||||||| ||||  ||||||||    
T  10143130 gtaaaatcgcaatcaaaattgatggattttatcaaaaaaaaaataatactaaatatatattataattggtatatagtcataaatgacttgatttataag 10143032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 55 - 137
Target Start/End: Complemental strand, 13023903 - 13023821
Alignment:
Q  55 aaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttacc 137  Q
    ||||| |||| | ||||||| |||||||| ||||||||||||||| |||||||||||||||| ||| || ||  |||||||||    
T  13023903 aaaattgggactttacttcaagtcgaaagagaatagcaaaatcggaactcgtaaaatcacaatcaagatagaatgattttacc 13023821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 36 - 98
Target Start/End: Complemental strand, 24719932 - 24719870
Alignment:
Q  36 agttctaaccaaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcg 98  Q
    ||||| || ||||||||||||||||| |||| | |||||||||||||||||| ||||||||||    
T  24719932 agttcaaatcaaggttgtcaaaatcgagattttgcttcaggtcgaaagggaagagcaaaatcg 24719870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 47 - 136
Target Start/End: Original strand, 13551448 - 13551537
Alignment:
Q  47 aggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 136  Q
    ||||||| || ||| ||| | |||||| |||||||| ||||||||||||||  ||||||||||||| |||  |||||||| |||||||||    
T  13551448 aggttgtaaagatccggactttacttctggtcgaaaaggaatagcaaaatcaagactcgtaaaatcgcaattaaaatcgaaggattttac 13551537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 45 - 133
Target Start/End: Original strand, 18459405 - 18459493
Alignment:
Q  45 caaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattt 133  Q
    ||||||||||||||||| |||| | |||||||| |||||| || ||||||||||  | |||||||||| |||  |||||||| ||||||    
T  18459405 caaggttgtcaaaatcgagattttgcttcaggttgaaaggaaagagcaaaatcgacaatcgtaaaatcgcaattaaaatcgaaggattt 18459493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 136
Target Start/End: Complemental strand, 8889571 - 8889481
Alignment:
Q  45 caaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 136  Q
    |||||||||||||||||||||| | |||||||||||||| | | |||||||| |  | | |||||||| ||||||||||||| |||| ||||    
T  8889571 caaggttgtcaaaatcgggattttgcttcaggtcgaaagag-agagcaaaattgacaattgtaaaatcgcaaccaaaatcgaaggatcttac 8889481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 147 - 202
Target Start/End: Complemental strand, 37240445 - 37240390
Alignment:
Q  147 taatactaaatatacgttataaatggtatatagtcataaattacttagtttataag 202  Q
    |||||||||||||| | ||||||||||||| |||||||||| ||||| ||||||||    
T  37240445 taatactaaatatatgatataaatggtatagagtcataaatgacttaatttataag 37240390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 105 - 198
Target Start/End: Original strand, 8011035 - 8011129
Alignment:
Q  105 gtaaaatcacaaccaaaatcgatggattttacctaaa-aaatttaatactaaatatacgttataaatggtatatagtcataaattacttagttta 198  Q
    |||||||| ||| ||||||||||| |||||||| ||| |||  |||| ||||||||| ||||||||| ||||||| | |||||| | ||||||||    
T  8011035 gtaaaatcgcaatcaaaatcgatgtattttaccaaaacaaaaataatgctaaatatatgttataaattgtatataattataaatgaattagttta 8011129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 45 - 98
Target Start/End: Complemental strand, 27528190 - 27528137
Alignment:
Q  45 caaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcg 98  Q
    ||||||||||||||||| |||| |||||||  ||||||||||||| ||||||||    
T  27528190 caaggttgtcaaaatcgagattttacttcatatcgaaagggaataacaaaatcg 27528137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 87 - 187
Target Start/End: Complemental strand, 55476223 - 55476123
Alignment:
Q  87 atagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttacctaaa-aaatttaatactaaatatacgttataaatggtatatagtcataa 185  Q
    |||||||| |||| |||||||||||| ||| ||||||||| ||||| |||| ||| |||  |||| | ||||||| ||||||||| | ||||||||||||    
T  55476223 atagcaaagtcggaactcgtaaaatcgcaatcaaaatcga-ggattctaccaaaacaaaaataatgcaaaatatatgttataaattgcatatagtcataa 55476125  T
Q  186 at 187  Q
    ||    
T  55476124 at 55476123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 133
Target Start/End: Complemental strand, 7452860 - 7452772
Alignment:
Q  45 caaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattt 133  Q
    |||||||||||||||  ||||| | |||||||||||||||||| || ||| | |  | |||||||||| ||| ||||||||| ||||||    
T  7452860 caaggttgtcaaaattaggattttgcttcaggtcgaaagggaagagaaaagttgaaaatcgtaaaatcgcaatcaaaatcgaaggattt 7452772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 193
Target Start/End: Original strand, 23064860 - 23064948
Alignment:
Q  105 gtaaaatcacaaccaaaatcgatggattttacctaaaaaatttaatactaaatatacgttataaatggtatatagtcataaattactta 193  Q
    |||||||  ||| |||||||||  ||||||||| |||||   |||||||||||||| |||||||||| ||||  ||||||||| |||||    
T  23064860 gtaaaattgcaatcaaaatcgaatgattttaccaaaaaataataatactaaatatatgttataaatgatatagggtcataaatgactta 23064948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 187
Target Start/End: Complemental strand, 8409863 - 8409729
Alignment:
Q  53 tcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttacctaaa-aaatttaata 151  Q
    |||||||||||| | ||||||| || |||||||| ||||||||| | || |  |||||||  || ||||||||| ||||| |||| ||| |||  ||||     
T  8409863 tcaaaatcgggactttacttcaagttgaaagggagtagcaaaattgagatttataaaatcgtaatcaaaatcga-ggattctaccaaaacaaaaataatg 8409765  T
Q  152 ctaaatatacgttataaatggtatatagtcataaat 187  Q
    ||||||||| |||||||||   ||||||||||||||    
T  8409764 ctaaatatatgttataaattacatatagtcataaat 8409729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 98
Target Start/End: Original strand, 15982740 - 15982795
Alignment:
Q  43 accaaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcg 98  Q
    ||||||||||||||||| |||||| | |||||| ||||||||| ||||||| ||||    
T  15982740 accaaggttgtcaaaattgggattttgcttcagatcgaaaggggatagcaagatcg 15982795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 49 - 124
Target Start/End: Original strand, 46664152 - 46664227
Alignment:
Q  49 gttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatc 124  Q
    ||||||||||| |||||| | ||||||||||||| | |||||||||||||  | ||| |||||| ||| |||||||    
T  46664152 gttgtcaaaattgggattttgcttcaggtcgaaaagaaatagcaaaatcgaaaatcggaaaatcgcaatcaaaatc 46664227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 91 - 136
Target Start/End: Complemental strand, 8367511 - 8367466
Alignment:
Q  91 caaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 136  Q
    |||||||||||||||||||||  ||| ||||||||| |||||||||    
T  8367511 caaaatcgggactcgtaaaattgcaatcaaaatcgaaggattttac 8367466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 65; Significance: 9e-29; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 106 - 202
Target Start/End: Complemental strand, 4247585 - 4247489
Alignment:
Q  106 taaaatcacaaccaaaatcgatggattttacctaaaaaatttaatactaaatatacgttataaatggtatatagtcataaattacttagtttataag 202  Q
    ||||||| ||| |||||||||||||||||||||||||||  |||||||||||||| |||| ||||| ||||||||||||||| ||||||||||||||    
T  4247585 taaaatcgcaatcaaaatcgatggattttacctaaaaaaaataatactaaatatatgttacaaatgatatatagtcataaatgacttagtttataag 4247489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 105 - 202
Target Start/End: Complemental strand, 5058759 - 5058662
Alignment:
Q  105 gtaaaatcacaaccaaaatcgatggattttacctaaaaaatttaatactaaatatacgttataaatggtatatagtcataaattacttagtttataag 202  Q
    |||||||| ||| ||||||||||||| |||||| |||||   |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||    
T  5058759 gtaaaatcgcaatcaaaatcgatggactttaccaaaaaataataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataag 5058662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 106 - 202
Target Start/End: Original strand, 20570785 - 20570881
Alignment:
Q  106 taaaatcacaaccaaaatcgatggattttacctaaaaaatttaatactaaatatacgttataaatggtatatagtcataaattacttagtttataag 202  Q
    ||||||||||| ||||||||||||| |||||| |||||   |||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||    
T  20570785 taaaatcacaatcaaaatcgatggactttaccaaaaaagaataatactaaatatatgttataaatggtatatagtcataaatgacttattttataag 20570881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 46 - 136
Target Start/End: Complemental strand, 17811702 - 17811612
Alignment:
Q  46 aaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 136  Q
    ||||||||||||||||||| | ||||||||||| |||||||||||||||||||||| |||||||||| ||| |||||||||  ||||||||    
T  17811702 aaggttgtcaaaatcgggactttacttcaggtcaaaagggaatagcaaaatcgggattcgtaaaatcgcaatcaaaatcgaaagattttac 17811612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 46 - 136
Target Start/End: Original strand, 24989549 - 24989639
Alignment:
Q  46 aaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 136  Q
    ||||||||||||||||||| | ||||| |||||||||||||||| |||||||||||||||||||||  ||| ||||||||| |||||||||    
T  24989549 aaggttgtcaaaatcgggactttactttaggtcgaaagggaataacaaaatcgggactcgtaaaatggcaatcaaaatcgaaggattttac 24989639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 105 - 202
Target Start/End: Original strand, 44944744 - 44944841
Alignment:
Q  105 gtaaaatcacaaccaaaatcgatggattttacctaaaaaatttaatactaaatatacgttataaatggtatatagtcataaattacttagtttataag 202  Q
    |||||||| ||| |||||||||| || |||||| |||||   |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||    
T  44944744 gtaaaatcgcaatcaaaatcgatagactttaccaaaaaataataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataag 44944841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 105 - 202
Target Start/End: Complemental strand, 17811578 - 17811480
Alignment:
Q  105 gtaaaatcacaaccaaaatcgatggattttacctaaaaaat-ttaatactaaatatacgttataaatggtatatagtcataaattacttagtttataag 202  Q
    |||||||| ||| |||||||||||||||||||| ||||||| |||||| ||||||||  |||||||||||||||| | |||||| ||||||||||||||    
T  17811578 gtaaaatcgcaatcaaaatcgatggattttacccaaaaaatattaatattaaatatattttataaatggtatataattataaatgacttagtttataag 17811480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 105 - 202
Target Start/End: Original strand, 24725371 - 24725473
Alignment:
Q  105 gtaaaatcacaaccaaaatcgatggattttacctaaaaaatttaa-----tactaaatatacgttataaatggtatatagtcataaattacttagtttat 199  Q
    |||||||| ||| |||||||||||||||||||| ||||||  |||     ||||||||||| |||||||||||||||||||||||||| |||||||||||    
T  24725371 gtaaaatcgcaatcaaaatcgatggattttacccaaaaaaaataaaataatactaaatatatgttataaatggtatatagtcataaatgacttagtttat 24725470  T
Q  200 aag 202  Q
    |||    
T  24725471 aag 24725473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 48 - 136
Target Start/End: Complemental strand, 8304438 - 8304350
Alignment:
Q  48 ggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 136  Q
    |||||||||||||| || | ||||||| |||||||| || ||||||||||| ||||||||||||||||| ||||||||| |||||||||    
T  8304438 ggttgtcaaaatcgagactttacttcaagtcgaaagagagtagcaaaatcgcgactcgtaaaatcacaatcaaaatcgaaggattttac 8304350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 46 - 135
Target Start/End: Complemental strand, 5058882 - 5058793
Alignment:
Q  46 aaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggatttta 135  Q
    ||||||||||||||||||| | |||||||| || |||||||||||||||||||| | |||||||||  ||| ||||||||| ||||||||    
T  5058882 aaggttgtcaaaatcgggactttacttcagatcaaaagggaatagcaaaatcggaattcgtaaaattgcaatcaaaatcgaaggatttta 5058793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 38 - 136
Target Start/End: Complemental strand, 5715643 - 5715549
Alignment:
Q  38 ttctaaccaaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 136  Q
    ||||||| ||||||||||||||||||| | ||||    ||||||||| ||||| ||||||||||||||||||||| ||| ||||||||| |||||||||    
T  5715643 ttctaactaaggttgtcaaaatcgggactttact----gtcgaaaggaaatagaaaaatcgggactcgtaaaatcgcaatcaaaatcgagggattttac 5715549  T

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Target: chr7; HSP #12
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 43 - 136
Target Start/End: Original strand, 25842503 - 25842596
Alignment:
Q  43 accaaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 136  Q
    ||||||||| ||||||| |||| | ||||||| ||||||||||| ||||||||||||||||||||||||| ||| |||||| |  |||||||||    
T  25842503 accaaggttatcaaaattgggactttacttcaagtcgaaagggagtagcaaaatcgggactcgtaaaatcgcaatcaaaattggaggattttac 25842596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 103 - 201
Target Start/End: Original strand, 8329941 - 8330040
Alignment:
Q  103 tcgtaaaatcacaaccaaaatcgatggattttacctaaaaaatttaatactaaatatacgttataaa-tggtatatagtcataaattacttagtttataa 201  Q
    |||||||||  ||| ||||||| |||||||||||| |||||| | |||| ||| |||| |||||||| |||||||||||||||||| |||||||||||||    
T  8329941 tcgtaaaattgcaatcaaaatcaatggattttaccaaaaaaaataaataataagtatatgttataaaatggtatatagtcataaatgacttagtttataa 8330040  T

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Target: chr7; HSP #14
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 103 - 193
Target Start/End: Original strand, 21846344 - 21846433
Alignment:
Q  103 tcgtaaaatcacaaccaaaatcgatggattttacctaaaaaatttaatactaaatatacgttataaatggtatatagtcataaattactta 193  Q
    |||||||||||||| |||||| ||||||||||||| ||| || | |||| |||||||| |||||||||| ||||||||||||||| |||||    
T  21846344 tcgtaaaatcacaatcaaaattgatggattttacccaaataaat-aatattaaatatatgttataaatgatatatagtcataaatgactta 21846433  T

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Target: chr7; HSP #15
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 46 - 136
Target Start/End: Original strand, 22687042 - 22687132
Alignment:
Q  46 aaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 136  Q
    |||||||| |||||||||||| | |||||| ||||||| ||| |||||||||| || ||||||||||||||||||||| || | |||||||    
T  22687042 aaggttgttaaaatcgggattttgcttcagatcgaaagagaagagcaaaatcgagaatcgtaaaatcacaaccaaaattgaagaattttac 22687132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 46 - 126
Target Start/End: Original strand, 44944620 - 44944700
Alignment:
Q  46 aaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcga 126  Q
    ||||||||||||||||||| | |||||||| |||||||| |||||||||  |||||||||||||||| |||  ||||||||    
T  44944620 aaggttgtcaaaatcgggactttacttcagatcgaaaggaaatagcaaatgcgggactcgtaaaatcgcaattaaaatcga 44944700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 147 - 202
Target Start/End: Complemental strand, 14055439 - 14055384
Alignment:
Q  147 taatactaaatatacgttataaatggtatatagtcataaattacttagtttataag 202  Q
    ||||| |||||||| |||||||||||||||||||||||||| ||||||||||||||    
T  14055439 taatattaaatatatgttataaatggtatatagtcataaatgacttagtttataag 14055384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 147 - 202
Target Start/End: Complemental strand, 14365467 - 14365412
Alignment:
Q  147 taatactaaatatacgttataaatggtatatagtcataaattacttagtttataag 202  Q
    ||||| |||||||| |||||||||||||||||||||||||| ||||||||||||||    
T  14365467 taatattaaatatatgttataaatggtatatagtcataaatgacttagtttataag 14365412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 152 - 202
Target Start/End: Original strand, 26281256 - 26281306
Alignment:
Q  152 ctaaatatacgttataaatggtatatagtcataaattacttagtttataag 202  Q
    ||||||||| |||||||||||||||||||||||||| ||||||||||||||    
T  26281256 ctaaatataagttataaatggtatatagtcataaatgacttagtttataag 26281306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 45 - 126
Target Start/End: Original strand, 10285677 - 10285758
Alignment:
Q  45 caaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcga 126  Q
    |||||||||||||||||||||| |||||||||||||||| ||| || ||||||   | |||||||||| ||| |||||||||    
T  10285677 caaggttgtcaaaatcgggattttacttcaggtcgaaagagaagagaaaaatcaacaatcgtaaaatcgcaatcaaaatcga 10285758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 43 - 136
Target Start/End: Complemental strand, 39182513 - 39182420
Alignment:
Q  43 accaaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 136  Q
    ||||||||||||||||||| |||| | |||||| || |||| ||| || |||||||  | |||||||||| ||||||||||||| |||||||||    
T  39182513 accaaggttgtcaaaatcgtgattttgcttcagttccaaagagaagagaaaaatcgacaatcgtaaaatcgcaaccaaaatcgaaggattttac 39182420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 44 - 132
Target Start/End: Original strand, 1981098 - 1981186
Alignment:
Q  44 ccaaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggatt 132  Q
    |||||||| |||||||||||| | ||||||| ||||||||||| ||| ||||| || ||||||||||||  || ||||||||| |||||    
T  1981098 ccaaggttatcaaaatcgggactttacttcaagtcgaaagggattagaaaaattggaactcgtaaaatcgtaatcaaaatcgaaggatt 1981186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 48 - 136
Target Start/End: Original strand, 20570662 - 20570750
Alignment:
Q  48 ggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 136  Q
    ||||||||||||||||| | |||||||||| ||||||||||| |||||| | ||||| ||||||| ||| |||||| ||  ||||||||    
T  20570662 ggttgtcaaaatcgggactctacttcaggttgaaagggaataacaaaattgagactcataaaatcgcaatcaaaattgaaagattttac 20570750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 53 - 136
Target Start/End: Complemental strand, 27221762 - 27221678
Alignment:
Q  53 tcaaaatcgggattatacttc-aggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 136  Q
    |||||||||||| | |||||  |||||||||| | ||||||||||||||| |||||||||| ||| ||||||||| |||||||||    
T  27221762 tcaaaatcgggactttacttttaggtcgaaagagtatagcaaaatcgggattcgtaaaatcgcaatcaaaatcgaaggattttac 27221678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 106 - 202
Target Start/End: Complemental strand, 5715514 - 5715422
Alignment:
Q  106 taaaatcacaaccaaaatcgatggattttacctaaaaaatttaatactaaatatacgttataaatggtatatagtcataaattacttagtttataag 202  Q
    ||||||| ||| ||||||||||| |||||||| ||||||    | | | |||||| ||||||||||||||||| |||||||| ||||||||||||||    
T  5715514 taaaatcgcaatcaaaatcgatgaattttaccaaaaaaa----aaaatgaatatatgttataaatggtatataatcataaatgacttagtttataag 5715422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 77 - 183
Target Start/End: Original strand, 8253990 - 8254096
Alignment:
Q  77 tcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttacctaaa-aaatttaatactaaatatacgttataaatggtat 175  Q
    |||||||||| ||||||||||| ||||||||||||| ||| ||||||||| ||||| |||| ||| |||  ||||  |||||||| ||||||||| | ||    
T  8253990 tcgaaagggagtagcaaaatcgagactcgtaaaatcgcaatcaaaatcga-ggattctaccaaaacaaaaataatgttaaatatatgttataaattgcat 8254088  T
Q  176 atagtcat 183  Q
    ||||||||    
T  8254089 atagtcat 8254096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 45 - 136
Target Start/End: Complemental strand, 11326638 - 11326547
Alignment:
Q  45 caaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 136  Q
    |||||||||||||||| | | | || ||||||| ||||| |||||||||||| ||||||| ||||||||||| |||||| || | |||||||    
T  11326638 caaggttgtcaaaatcagaactttatttcaggtggaaagagaatagcaaaattgggactcttaaaatcacaatcaaaattgaagtattttac 11326547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 147 - 202
Target Start/End: Original strand, 24990012 - 24990067
Alignment:
Q  147 taatactaaatatacgttataaatggtatatagtcataaattacttagtttataag 202  Q
    |||||||||||||| ||||||||| |||||||||||||||| | ||||||||||||    
T  24990012 taatactaaatatatgttataaatagtatatagtcataaatgatttagtttataag 24990067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 151 - 202
Target Start/End: Complemental strand, 27221602 - 27221551
Alignment:
Q  151 actaaatatacgttataaatggtatatagtcataaattacttagtttataag 202  Q
    |||| ||||| |||||||||||||||||||||||||| ||||||||||||||    
T  27221602 actatatatatgttataaatggtatatagtcataaatgacttagtttataag 27221551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 106 - 202
Target Start/End: Original strand, 8346431 - 8346529
Alignment:
Q  106 taaaatcacaaccaaaatcgatggattttacctaaaaaat-ttaatactaaatatacgttat-aaatggtatatagtcataaattacttagtttataag 202  Q
    ||||||| ||| || |||| |||||||||||| |||||||  |||||||||||||| ||||| ||||| ||||||| |||| || ||||||||||||||    
T  8346431 taaaatctcaatcataatcaatggattttaccaaaaaaataataatactaaatatatgttataaaatgatatatagacatagatgacttagtttataag 8346529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 46 - 136
Target Start/End: Complemental strand, 14055610 - 14055521
Alignment:
Q  46 aaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 136  Q
    ||||||||||||||||| ||| | |||||||||||||| ||  ||||||||||  | | |||||||| ||||||||||||| |||||||||    
T  14055610 aaggttgtcaaaatcgg-attttgcttcaggtcgaaagagatgagcaaaatcgacaatggtaaaatcgcaaccaaaatcgaaggattttac 14055521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 46 - 136
Target Start/End: Complemental strand, 14365638 - 14365549
Alignment:
Q  46 aaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 136  Q
    ||||||||||||||||| ||| | |||||||||||||| ||  ||||||||||  | | |||||||| ||||||||||||| |||||||||    
T  14365638 aaggttgtcaaaatcgg-attttgcttcaggtcgaaagagatgagcaaaatcgacaatggtaaaatcgcaaccaaaatcgaaggattttac 14365549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 47 - 136
Target Start/End: Original strand, 9685070 - 9685159
Alignment:
Q  47 aggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 136  Q
    ||||||| || ||| ||| | |||||| |||||||| ||||||||||||||  ||||||||||||| |||  |||||||| |||||||||    
T  9685070 aggttgtaaagatccggactttacttctggtcgaaaaggaatagcaaaatcaagactcgtaaaatcgcaattaaaatcgaaggattttac 9685159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 105 - 202
Target Start/End: Complemental strand, 11325209 - 11325111
Alignment:
Q  105 gtaaaatcacaaccaaaatcgatggattttacctaaaaaatttaatactaaatatacgttataaat----ggtatatagtcataaattacttagtttata 200  Q
    ||||||| |||| |||||||||||||||||||| ||||||   || |||||||||  |||||||||    ||||||||||||||||| ||||||||||||    
T  11325209 gtaaaattacaatcaaaatcgatggattttaccaaaaaaaaaaaa-actaaatat--gttataaataattggtatatagtcataaatgacttagtttata 11325113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 87 - 187
Target Start/End: Original strand, 25842625 - 25842725
Alignment:
Q  87 atagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttacctaaa-aaatttaatactaaatatacgttataaatggtatatagtcataa 185  Q
    |||||||| ||||||||||||||||| ||| ||||||||| ||||| |||| ||| |||  ||||  |||||||| ||||||||| | ||||||||||||    
T  25842625 atagcaaagtcgggactcgtaaaatcgcaatcaaaatcga-ggattctaccaaaacaaaaataatgttaaatatatgttataaattgcatatagtcataa 25842723  T
Q  186 at 187  Q
    ||    
T  25842724 at 25842725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 136
Target Start/End: Complemental strand, 4247711 - 4247620
Alignment:
Q  45 caaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 136  Q
    |||| |||||||||| |||| | ||||||| ||||||||||||||  ||||| |||| |||||||||| ||| |||| || | |||||||||    
T  4247711 caagattgtcaaaattgggactttacttcaagtcgaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcaaaggattttac 4247620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 87 - 187
Target Start/End: Original strand, 1981217 - 1981317
Alignment:
Q  87 atagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttacctaaa-aaatttaatactaaatatacgttataaatggtatatagtcataa 185  Q
    |||||||| ||||||||||||||||  ||| ||||||||| ||||| || | ||| |||  |||| ||||||||| ||||||||| | ||||||||||||    
T  1981217 atagcaaagtcgggactcgtaaaattgcaatcaaaatcga-ggattctatcaaaacaaaaataatgctaaatatatgttataaattgcatatagtcataa 1981315  T
Q  186 at 187  Q
    ||    
T  1981316 at 1981317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 195
Target Start/End: Original strand, 26617376 - 26617461
Alignment:
Q  105 gtaaaatcacaaccaaaatcgatggattttacctaaaaaatttaatactaaatatacgttataaatggtatatagtcataaattacttagt 195  Q
    |||||||| ||| |||||||||| ||||||||  |||||| | ||||||||||||| ||||||||||    |||||||||||| |||||||    
T  26617376 gtaaaatcgcaatcaaaatcgattgattttacaaaaaaaaat-aatactaaatatatgttataaatg----atagtcataaatgacttagt 26617461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 46 - 134
Target Start/End: Original strand, 26281165 - 26281251
Alignment:
Q  46 aaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggatttt 134  Q
    ||||||||||||||| ||| | ||||| ||||||||| |||||||| ||||| ||| |||||||||| ||| |||||| || |||||||    
T  26281165 aaggttgtcaaaatcaggactttactttaggtcgaaaaggaatagc-aaatcagga-tcgtaaaatcgcaatcaaaattgaaggatttt 26281251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 79 - 197
Target Start/End: Original strand, 17809000 - 17809119
Alignment:
Q  79 gaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttacctaaa-aaatttaatactaaatatacgttataaatggtatat 177  Q
    |||| |||||||||||||||  | |||||||||| ||| ||||||  || |||| |||| ||| |||  |||| ||||||||| ||||||||| | ||||    
T  17809000 gaaatggaatagcaaaatcgaaaatcgtaaaatcgcaatcaaaattcatagattctaccaaaacaaaaataatgctaaatatatgttataaattgcatat 17809099  T
Q  178 agtcataaattacttagttt 197  Q
    | |||||||| ||| |||||    
T  17809100 aatcataaatgactcagttt 17809119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 39 - 98
Target Start/End: Original strand, 21157468 - 21157527
Alignment:
Q  39 tctaaccaaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcg 98  Q
    |||||| |||||||| ||||| || ||| |||||||| || |||||||||||||||||||    
T  21157468 tctaacaaaggttgttaaaattggaattttacttcagatcaaaagggaatagcaaaatcg 21157527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 136
Target Start/End: Complemental strand, 1977878 - 1977812
Alignment:
Q  70 cttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 136  Q
    |||||||||||||| ||| || |||||||  | |||||||||| ||| ||||||||| |||||||||    
T  1977878 cttcaggtcgaaagagaagagaaaaatcgacaatcgtaaaatcgcaatcaaaatcgaaggattttac 1977812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 202
Target Start/End: Original strand, 8343699 - 8343796
Alignment:
Q  103 tcgtaaaatcacaaccaaaatcgatggattttacctaaaaaatttaatactaaatatacgttataaa-tggtatatagtcataaattacttagtttataa 201  Q
    |||||||||| ||| |||| || ||||||||||   |||||   ||||||||||||||  ||||||| ||||||||| ||||| || |||||||||||||    
T  8343699 tcgtaaaatcgcaatcaaagtcaatggatttta---aaaaataataatactaaatataacttataaaatggtatataatcatagatgacttagtttataa 8343795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 136
Target Start/End: Original strand, 23618204 - 23618294
Alignment:
Q  46 aaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 136  Q
    |||||| ||||||||  || | ||||| | || |||||||| |||||||||||||||||  |||||| ||| ||||||||| | |||||||    
T  23618204 aaggttatcaaaatcaagactttactttaagttgaaagggagtagcaaaatcgggactccgaaaatcgcaatcaaaatcgaagaattttac 23618294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 47 - 124
Target Start/End: Complemental strand, 4575083 - 4575006
Alignment:
Q  47 aggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatc 124  Q
    ||||||||||||| | |||| | |||||||| |||||||||||| ||||||   | |||||||||| ||| |||||||    
T  4575083 aggttgtcaaaattgagatttttcttcaggttgaaagggaatagtaaaatcaaaaatcgtaaaatcgcaatcaaaatc 4575006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 87 - 187
Target Start/End: Original strand, 23618323 - 23618423
Alignment:
Q  87 atagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttacctaaa-aaatttaatactaaatatacgttataaatggtatatagtcataa 185  Q
    |||||||| |||||||||||||||||  || ||||||||| ||||| |||| ||| |||  ||||  ||||||||  |||||||| | ||||||||||||    
T  23618323 atagcaaagtcgggactcgtaaaatcgtaatcaaaatcga-ggattctaccaaaacaaaaataatgttaaatatatattataaattgcatatagtcataa 23618421  T
Q  186 at 187  Q
    ||    
T  23618422 at 23618423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 105 - 174
Target Start/End: Original strand, 27509311 - 27509379
Alignment:
Q  105 gtaaaatcacaaccaaaatcgatggattttacctaaaaaatttaatactaaatatacgttataaatggta 174  Q
    |||||||| |||  ||| ||||| ||||||||| |||||| | ||||||||||||| |||||||||||||    
T  27509311 gtaaaatcgcaataaaattcgattgattttaccaaaaaaaat-aatactaaatatatgttataaatggta 27509379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 121
Target Start/End: Complemental strand, 11325333 - 11325257
Alignment:
Q  45 caaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaa 121  Q
    ||||||||||||||| |||||  | ||||| ||| |||| ||| ||||||||||  | |||||||||| ||||||||    
T  11325333 caaggttgtcaaaattgggatcttgcttcacgtcaaaagagaagagcaaaatcgacaatcgtaaaatcgcaaccaaa 11325257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 65; Significance: 9e-29; HSPs: 48)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 105 - 201
Target Start/End: Complemental strand, 28746006 - 28745910
Alignment:
Q  105 gtaaaatcacaaccaaaatcgatggattttacctaaaaaatttaatactaaatatacgttataaatggtatatagtcataaattacttagtttataa 201  Q
    |||||||| ||| |||||||||||||||||||| |||||| |||||| |||||||| ||||||||| |||||||||||||||| |||||||||||||    
T  28746006 gtaaaatcgcaatcaaaatcgatggattttacccaaaaaaattaatagtaaatatatgttataaatagtatatagtcataaatgacttagtttataa 28745910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 105 - 202
Target Start/End: Complemental strand, 39428133 - 39428035
Alignment:
Q  105 gtaaaatcacaaccaaaatcgatggattttacctaaaaaat-ttaatactaaatatacgttataaatggtatatagtcataaattacttagtttataag 202  Q
    |||||||| ||| |||||||||||||||||||| ||||||  ||||||||||||||| ||||||| | |||||||||||||||| ||||||||||||||    
T  39428133 gtaaaatcgcaatcaaaatcgatggattttacccaaaaaaaattaatactaaatatatgttataagtagtatatagtcataaatgacttagtttataag 39428035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 119 - 202
Target Start/End: Original strand, 15515171 - 15515252
Alignment:
Q  119 aaaatcgatggattttacctaaaaaatttaatactaaatatacgttataaatggtatatagtcataaattacttagtttataag 202  Q
    |||||| |||||||||||| |||||||  ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||    
T  15515171 aaaatccatggattttaccaaaaaaat--aatactaaatatatgttataaatggtatatagtcataaatgacttagtttataag 15515252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 53 - 136
Target Start/End: Complemental strand, 3041570 - 3041487
Alignment:
Q  53 tcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 136  Q
    |||||||||||||| ||||||| ||||||| ||| ||||||||||||||||||||||||| ||| ||||||||| |||||||||    
T  3041570 tcaaaatcgggattttacttcaagtcgaaatggagtagcaaaatcgggactcgtaaaatcgcaatcaaaatcgaaggattttac 3041487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 45 - 136
Target Start/End: Original strand, 8592173 - 8592264
Alignment:
Q  45 caaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 136  Q
    |||||||||| ||||||||| | ||||||| ||||||||| ||||||||||||| ||||||||||||| ||| ||||||||| |||||||||    
T  8592173 caaggttgtcgaaatcgggactttacttcaagtcgaaaggaaatagcaaaatcgagactcgtaaaatcgcaatcaaaatcgaaggattttac 8592264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 45 - 136
Target Start/End: Complemental strand, 28746131 - 28746040
Alignment:
Q  45 caaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 136  Q
    ||||||||||||||| |||| | ||||||||||||||||  ||||||||||||||||||||||||||| ||| ||||||||| | |||||||    
T  28746131 caaggttgtcaaaattgggactttacttcaggtcgaaagaaaatagcaaaatcgggactcgtaaaatcgcaatcaaaatcgaagaattttac 28746040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 45 - 136
Target Start/End: Complemental strand, 41671534 - 41671443
Alignment:
Q  45 caaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 136  Q
    |||||||||||||||||||||| | |||||||||||||| ||| ||||||||||  | | |||||||| ||||||||||||| |||||||||    
T  41671534 caaggttgtcaaaatcgggattttgcttcaggtcgaaagagaagagcaaaatcgataattgtaaaatcgcaaccaaaatcgaaggattttac 41671443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 46 - 136
Target Start/End: Original strand, 24619972 - 24620062
Alignment:
Q  46 aaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 136  Q
    ||||||||||||||||| | | ||||||| ||| ||||||||||||||||| |||||| |||||||| ||| ||||||||| |||||||||    
T  24619972 aaggttgtcaaaatcggaactttacttcaagtcaaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttac 24620062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 42 - 136
Target Start/End: Complemental strand, 29067634 - 29067541
Alignment:
Q  42 aaccaaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 136  Q
    ||||||||||||||||||||| | | |||||||||||||| ||||||||||||||||| |||| ||||||| ||| | ||||||| |||||||||    
T  29067634 aaccaaggttgtcaaaatcggaactttacttcaggtcgaatgggaatagcaaaatcggaactcataaaatctcaatc-aaatcgaaggattttac 29067541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 43 - 136
Target Start/End: Original strand, 8560229 - 8560322
Alignment:
Q  43 accaaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 136  Q
    ||||||||| |||||||||||| | ||||||| ||| ||||||| ||||||||||| ||||||| ||||| ||| ||||||||| |||||||||    
T  8560229 accaaggttatcaaaatcgggactttacttcaagtcaaaagggagtagcaaaatcgagactcgtgaaatcgcaatcaaaatcgaaggattttac 8560322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 45 - 110
Target Start/End: Original strand, 24649523 - 24649588
Alignment:
Q  45 caaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaa 110  Q
    ||||||||||||||| |||| | ||||||||||||||||||||||||||||| |||||||||||||    
T  24649523 caaggttgtcaaaattgggactttacttcaggtcgaaagggaatagcaaaattgggactcgtaaaa 24649588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 118 - 202
Target Start/End: Complemental strand, 42697065 - 42696980
Alignment:
Q  118 caaaatcgatggattttacctaaaaaatttaa-tactaaatatacgttataaatggtatatagtcataaattacttagtttataag 202  Q
    |||||||||||||||||||| ||||||   || ||| ||||||| |||||||||||||||||||||||||| ||||||||||||||    
T  42697065 caaaatcgatggattttaccaaaaaaaaaaaaataccaaatatatgttataaatggtatatagtcataaatgacttagtttataag 42696980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 46 - 124
Target Start/End: Original strand, 22355841 - 22355919
Alignment:
Q  46 aaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatc 124  Q
    |||||| |||||||||| | | ||| ||||||||||| ||||||||||||||||||||||||||||| ||| |||||||    
T  22355841 aaggttctcaaaatcggaactttacatcaggtcgaaatggaatagcaaaatcgggactcgtaaaatcgcaatcaaaatc 22355919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 45 - 126
Target Start/End: Original strand, 20766675 - 20766756
Alignment:
Q  45 caaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcga 126  Q
    |||||||||||||||||||| | |||||||  ||||||| || ||||||||||| ||||||||||||| ||| |||||||||    
T  20766675 caaggttgtcaaaatcgggactttacttcaactcgaaagagagtagcaaaatcgagactcgtaaaatcgcaatcaaaatcga 20766756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 105 - 178
Target Start/End: Original strand, 25870221 - 25870294
Alignment:
Q  105 gtaaaatcacaaccaaaatcgatggattttacctaaaaaatttaatactaaatatacgttataaatggtatata 178  Q
    |||||||| ||| |||||||||||||||||||| |||||   |||||||||||||| |||||||||||||||||    
T  25870221 gtaaaatcgcaatcaaaatcgatggattttaccaaaaaacaataatactaaatatatgttataaatggtatata 25870294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 105 - 202
Target Start/End: Original strand, 8156028 - 8156126
Alignment:
Q  105 gtaaaatcacaaccaaaatcgatggattttacctaaaaaatt--taatactaaatatacgttataaatggtatatagtcataaattacttagtttataag 202  Q
    |||||||| ||| ||| |||| ||||||||||| |||| | |  |||||||||||||| ||||||||||||||||||| |||||| ||||||||||||||    
T  8156028 gtaaaatcgcaatcaatatcg-tggattttaccaaaaataataataatactaaatatatgttataaatggtatatagttataaataacttagtttataag 8156126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 46 - 136
Target Start/End: Complemental strand, 18014345 - 18014255
Alignment:
Q  46 aaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 136  Q
    |||||| |||||||||||| | ||||||| ||  ||| ||| ||||||||| ||||||||||||||| ||| ||||||||| |||||||||    
T  18014345 aaggttatcaaaatcgggactttacttcaagttaaaatggagtagcaaaattgggactcgtaaaatcgcaatcaaaatcgaaggattttac 18014255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 105 - 202
Target Start/End: Original strand, 24620096 - 24620196
Alignment:
Q  105 gtaaaatcacaaccaaaatcgatggattttacctaaaaaattt---aatactaaatatacgttataaatggtatatagtcataaattacttagtttataa 201  Q
    |||||||| ||| |||||| | ||||||||||| ||||||  |   |||||||||||||  |||||||||||||||| |||||||| |||||||||||||    
T  24620096 gtaaaatcgcaatcaaaattgttggattttaccaaaaaaaaataaaaatactaaatatattttataaatggtatataatcataaatgacttagtttataa 24620195  T
Q  202 g 202  Q
    |    
T  24620196 g 24620196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 68 - 134
Target Start/End: Original strand, 30727656 - 30727722
Alignment:
Q  68 tacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggatttt 134  Q
    |||||||||| |||||||||||||||||||| ||||| ||||||| ||| ||||||||||| |||||    
T  30727656 tacttcaggttgaaagggaatagcaaaatcgagactcctaaaatcgcaatcaaaatcgatgaatttt 30727722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 49 - 123
Target Start/End: Complemental strand, 39428258 - 39428184
Alignment:
Q  49 gttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaat 123  Q
    |||||||||||||||| | |||||  ||| |||||||||||||||||||||||||| ||||||| ||| ||||||    
T  39428258 gttgtcaaaatcgggactttacttgcggttgaaagggaatagcaaaatcgggactcataaaatcgcaatcaaaat 39428184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 42 - 135
Target Start/End: Original strand, 3449081 - 3449174
Alignment:
Q  42 aaccaaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggatttta 135  Q
    |||||||||||||||||| |||||| | ||| |||| ||||| ||| ||||||||||  | |||||||||| |||||||||||||  |||||||    
T  3449081 aaccaaggttgtcaaaattgggattttgctttaggttgaaagagaagagcaaaatcgacaatcgtaaaatcgcaaccaaaatcgaatgatttta 3449174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 105 - 199
Target Start/End: Original strand, 22494681 - 22494781
Alignment:
Q  105 gtaaaatcacaaccaaaatcgatggattttacctaaaaaat------ttaatactaaatatacgttataaatggtatatagtcataaattacttagttta 198  Q
    |||||||| ||| |||||| ||||||||||||| ||||||       || |||||||||||| |||||||||||||||||||||||| | ||||||||||    
T  22494681 gtaaaatcgcaatcaaaatagatggattttacccaaaaaaaaaaaacttgatactaaatatatgttataaatggtatatagtcataactgacttagttta 22494780  T
Q  199 t 199  Q
    |    
T  22494781 t 22494781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 43 - 136
Target Start/End: Original strand, 25870094 - 25870187
Alignment:
Q  43 accaaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 136  Q
    ||||||||||||||||||| |||| | ||| |||||||||| ||| || |||||||  | |||||||||| ||||||||||| | |||||||||    
T  25870094 accaaggttgtcaaaatcgagattttgctttaggtcgaaagagaagagtaaaatcgacaatcgtaaaatcgcaaccaaaatcaaaggattttac 25870187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 46 - 187
Target Start/End: Original strand, 6860986 - 6861121
Alignment:
Q  46 aaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttacctaaa-aaa 144  Q
    |||||||||||||| |||||| | ||||||||||||||||||||| ||||       || ||||||| ||| ||||||||||||||| |||| ||| |||    
T  6860986 aaggttgtcaaaattgggattttgcttcaggtcgaaagggaatagtaaaa-------tcataaaatcgcaatcaaaatcgatggattctaccaaaacaaa 6861078  T
Q  145 tttaatactaaatatacgttataaatggtatatagtcataaat 187  Q
      |||  |||| |||| ||||||||| || |||||||||||||    
T  6861079 aataaagctaactatatgttataaattgtctatagtcataaat 6861121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 53 - 187
Target Start/End: Complemental strand, 9169942 - 9169808
Alignment:
Q  53 tcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttacctaaa-aaatttaata 151  Q
    |||||||||| | | ||||||| ||||||||| | ||||||||| ||||| ||||||||  ||| ||||||||| ||||| |||| ||| |||  ||||     
T  9169942 tcaaaatcggaactttacttcaagtcgaaaggaagtagcaaaattgggacccgtaaaattgcaatcaaaatcga-ggattctaccaaaacaaaaataatg 9169844  T
Q  152 ctaaatatacgttataaatggtatatagtcataaat 187  Q
     |||||||| ||||||||| | ||||||||||||||    
T  9169843 ttaaatatatgttataaattgcatatagtcataaat 9169808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 103 - 195
Target Start/End: Complemental strand, 22137509 - 22137417
Alignment:
Q  103 tcgtaaaatcacaaccaaaatcgatggattttacctaaaaaatt--taatactaaatatacgttataaatggtatatagtcataaattacttagt 195  Q
    |||||||| || || |||||| ||||||||||||  ||||||||  |||||||||||||| ||||||||| |||||||||||||||| |||||||    
T  22137509 tcgtaaaaccaaaatcaaaattgatggattttaca-aaaaaattaataatactaaatata-gttataaatagtatatagtcataaatgacttagt 22137417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 45 - 136
Target Start/End: Complemental strand, 22971163 - 22971073
Alignment:
Q  45 caaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 136  Q
    ||||||| ||||||| |||| | ||||||| ||  ||||| | ||||||||||||||||||||||||| ||| ||||||||| |||||||||    
T  22971163 caaggttatcaaaattgggactttacttcaagttaaaagg-agtagcaaaatcgggactcgtaaaatcgcaatcaaaatcgaaggattttac 22971073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 46 - 136
Target Start/End: Complemental strand, 17064661 - 17064571
Alignment:
Q  46 aaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 136  Q
    |||||||||||||| |||||| | ||||||||||||||  || | ||||||||  | |||||||||| ||| ||||||||| |||||||||    
T  17064661 aaggttgtcaaaattgggattttgcttcaggtcgaaagaaaagatcaaaatcgacaatcgtaaaatcgcaatcaaaatcgaaggattttac 17064571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 105 - 171
Target Start/End: Complemental strand, 20756252 - 20756186
Alignment:
Q  105 gtaaaatcacaaccaaaatcgatggattttacctaaaaaatttaatactaaatatacgttataaatg 171  Q
    |||||||| ||| |||||||||||||||||||| |||| |  |||||||||||||| ||||||||||    
T  20756252 gtaaaatcgcaatcaaaatcgatggattttacccaaaagaaataatactaaatatatgttataaatg 20756186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 87 - 187
Target Start/End: Complemental strand, 19348788 - 19348688
Alignment:
Q  87 atagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttacctaaa-aaatttaatactaaatatacgttataaatggtatatagtcataa 185  Q
    |||||||| ||||||||||||||||| ||| ||||||||| ||||| |||| ||| |||  ||||  |||||||| ||||||||| | ||||||||||||    
T  19348788 atagcaaattcgggactcgtaaaatcgcaatcaaaatcga-ggattataccaaaacaaaaataatgttaaatatatgttataaattgcatatagtcataa 19348690  T
Q  186 at 187  Q
    ||    
T  19348689 at 19348688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 43 - 124
Target Start/End: Complemental strand, 22137634 - 22137553
Alignment:
Q  43 accaaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatc 124  Q
    ||||| ||||||||||||| |||| |  ||||||||||||| ||| ||||||||| | | | ||||||||||||||||||||    
T  22137634 accaatgttgtcaaaatcgagattttgtttcaggtcgaaagagaagagcaaaatcagcaatagtaaaatcacaaccaaaatc 22137553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 47 - 135
Target Start/End: Complemental strand, 19348906 - 19348818
Alignment:
Q  47 aggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggatttta 135  Q
    ||||| ||||||| | || | ||||||| ||| ||||||| ||||||||||| ||||||||||||| ||| |||||| || ||||||||    
T  19348906 aggttatcaaaattgagactttacttcaagtcaaaagggagtagcaaaatcgagactcgtaaaatcgcaatcaaaatggaaggatttta 19348818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 87 - 170
Target Start/End: Original strand, 8560351 - 8560433
Alignment:
Q  87 atagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttacctaaaaaatttaatactaaatatacgttataaat 170  Q
    |||||||| ||||||||||||||||| ||| |||||||||| |||| |||| ||| ||  |||| ||||||||| |||||||||    
T  8560351 atagcaaagtcgggactcgtaaaatcgcaatcaaaatcgat-gattctaccaaaataaaataatgctaaatatatgttataaat 8560433  T

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Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 87 - 193
Target Start/End: Original strand, 8592293 - 8592399
Alignment:
Q  87 atagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttacctaaa-aaatttaatactaaatatacgttataaatggtatatagtcataa 185  Q
    |||||||||||||| ||||||||||| ||| ||||||| | ||||| |||| ||| |||  ||||  |||||||| ||||||||| | ||||||||||||    
T  8592293 atagcaaaatcgggtctcgtaaaatcgcaatcaaaatc-aaggattctaccaaaacaaaaataatgataaatatatgttataaattgcatatagtcataa 8592391  T
Q  186 attactta 193  Q
    || |||||    
T  8592392 atgactta 8592399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 50 - 137
Target Start/End: Complemental strand, 13006174 - 13006088
Alignment:
Q  50 ttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttacc 137  Q
    ||||||||||||||||| | ||| ||||||||||||||||||||||| |  | |||||||||| ||| |||||| ||  |||||||||    
T  13006174 ttgtcaaaatcgggatt-tgctttaggtcgaaagggaatagcaaaattgaaaatcgtaaaatcgcaatcaaaattgaatgattttacc 13006088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 136
Target Start/End: Complemental strand, 27090797 - 27090706
Alignment:
Q  45 caaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 136  Q
    |||||||||| |||||| |||| ||||| ||||||||||||||||| ||||| |  | |||||| ||| |||  |||||||| |||||||||    
T  27090797 caaggttgtcgaaatcgagattttactttaggtcgaaagggaatagaaaaattgcaaatcgtaagatcgcaataaaaatcgaaggattttac 27090706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 46 - 136
Target Start/End: Original strand, 10872490 - 10872580
Alignment:
Q  46 aaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 136  Q
    ||||||||||||||| ||||| ||||||||||| |||||||| || ||||||   | || ||||||| ||| |||||| || |||||||||    
T  10872490 aaggttgtcaaaatcaggattttacttcaggtcaaaagggaagagaaaaatcaaaaatcataaaatcgcaatcaaaattgaaggattttac 10872580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 45 - 170
Target Start/End: Original strand, 15806222 - 15806348
Alignment:
Q  45 caaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttacctaaa-aa 143  Q
    ||||||||||||||||| |||| | |||||| ||||||||||| ||||||||||  | || || ||||  || || ||| |||||||| |||| ||| ||    
T  15806222 caaggttgtcaaaatcgagattttgcttcagctcgaaagggaaaagcaaaatcgaaaatcatacaatcgtaatcagaattgatggattctaccaaaacaa 15806321  T
Q  144 atttaatactaaatatacgttataaat 170  Q
    |  |||| ||||||||| |||||||||    
T  15806322 aaataatgctaaatatatgttataaat 15806348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 103 - 195
Target Start/End: Complemental strand, 21963663 - 21963568
Alignment:
Q  103 tcgtaaaatcacaaccaaaatcgatggattttacctaaaaaatt--taatactaaatatacgttataaatgg--tatatagtcataaattacttagt 195  Q
    |||||||| || || |||||| ||||||||||||  ||||||||  |||||||||||||| ||||||||| |  ||||||||||||||| |||||||    
T  21963663 tcgtaaaaccagaatcaaaattgatggattttacaaaaaaaattaataatactaaatata-gttataaatagtatatatagtcataaatgacttagt 21963568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 103 - 195
Target Start/End: Complemental strand, 21986099 - 21986004
Alignment:
Q  103 tcgtaaaatcacaaccaaaatcgatggattttacctaaaaaatt--taatactaaatatacgttataaatgg--tatatagtcataaattacttagt 195  Q
    |||||||| || || |||||| ||||||||||||  ||||||||  |||||||||||||| ||||||||| |  ||||||||||||||| |||||||    
T  21986099 tcgtaaaaccagaatcaaaattgatggattttacaaaaaaaattaataatactaaatata-gttataaatagtatatatagtcataaatgacttagt 21986004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 174
Target Start/End: Original strand, 22355961 - 22356030
Alignment:
Q  105 gtaaaatcacaaccaaaatcgatggattttacctaaaaaatttaatactaaatatacgttataaatggta 174  Q
    |||||| | ||| |||||||||||||||||||| |||||   ||||| |||||||| |||||||||||||    
T  22355961 gtaaaaccgcaaacaaaatcgatggattttaccaaaaaataataataataaatatatgttataaatggta 22356030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 103 - 181
Target Start/End: Original strand, 6136466 - 6136543
Alignment:
Q  103 tcgtaaaatcacaaccaaaatcgatggattttacctaaa-aaatttaatactaaatatacgttataaatggtatatagtc 181  Q
    |||||||||||||| |||||||||||||||||||| ||| |||  ||||||||| |||| ||  ||||| ||||||||||    
T  6136466 tcgtaaaatcacaatcaaaatcgatggattttaccaaaacaaaaataatactaactatatgt--taaattgtatatagtc 6136543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 123
Target Start/End: Complemental strand, 21963788 - 21963708
Alignment:
Q  43 accaaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaat 123  Q
    ||||| ||| ||||||||| |||| |  ||||||||||||| ||| ||||||||||  | | |||||||||||||||||||    
T  21963788 accaatgttatcaaaatcgagattttgtttcaggtcgaaagagaagagcaaaatcgacaatagtaaaatcacaaccaaaat 21963708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 123
Target Start/End: Complemental strand, 21986224 - 21986144
Alignment:
Q  43 accaaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaat 123  Q
    ||||| ||| ||||||||| |||| |  ||||||||||||| ||| ||||||||||  | | |||||||||||||||||||    
T  21986224 accaatgttatcaaaatcgagattttgtttcaggtcgaaagagaagagcaaaatcgacaatagtaaaatcacaaccaaaat 21986144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 202
Target Start/End: Complemental strand, 29067507 - 29067417
Alignment:
Q  105 gtaaaatcacaaccaaaatcgatggattttacctaaaaaat--ttaatactaaatatacgttataaatggtatatagtcataaattacttagtttataag 202  Q
    |||||||| ||| |||||||||||||||||||| ||||||   |||| ||||||||||         |||||||||||||||||| ||||||||||||||    
T  29067507 gtaaaatcgcaatcaaaatcgatggattttacccaaaaaaaaattaacactaaatata---------tggtatatagtcataaatgacttagtttataag 29067417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 49 - 136
Target Start/End: Complemental strand, 27676787 - 27676700
Alignment:
Q  49 gttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 136  Q
    ||||| |||||| ||||| | ||||| |||||||||||| ||||||||||  | || ||||||| ||| |||||||||  ||||||||    
T  27676787 gttgttaaaatcaggattttgcttcaagtcgaaagggaagagcaaaatcgaaaatcttaaaatcgcaatcaaaatcgaaagattttac 27676700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 87 - 170
Target Start/End: Complemental strand, 18014226 - 18014143
Alignment:
Q  87 atagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttacctaaa-aaatttaatactaaatatacgttataaat 170  Q
    |||||||| ||||||||||||||||| ||| ||||||||| ||||| || | ||| |||  |||| ||||||||| |||||||||    
T  18014226 atagcaaagtcgggactcgtaaaatcgcaatcaaaatcga-ggattctatcaaaacaaaaataatgctaaatatatgttataaat 18014143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 87 - 123
Target Start/End: Original strand, 20766795 - 20766831
Alignment:
Q  87 atagcaaaatcgggactcgtaaaatcacaaccaaaat 123  Q
    |||||||||||||||||| ||||||||||| ||||||    
T  20766795 atagcaaaatcgggactcataaaatcacaatcaaaat 20766831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186 (Bit Score: 63; Significance: 1e-27; HSPs: 2)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 105 - 202
Target Start/End: Complemental strand, 8671 - 8576
Alignment:
Q  105 gtaaaatcacaaccaaaatcgatggattttacctaaaaaatttaatactaaatatacgttataaatggtatatagtcataaattacttagtttataag 202  Q
    |||||||| ||| |||||||||||||||||||| |||||||  ||||||||||||| | |||||||||||||||||||||||| ||||||||||||||    
T  8671 gtaaaatcgcaatcaaaatcgatggattttaccaaaaaaat--aatactaaatatatggtataaatggtatatagtcataaatgacttagtttataag 8576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 44 - 136
Target Start/End: Complemental strand, 8797 - 8705
Alignment:
Q  44 ccaaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 136  Q
    |||||||| |||||||||||| | |||||||||||||||||||||| ||||||||| |||||||||||| ||| |||||| || |||||||||    
T  8797 ccaaggttctcaaaatcgggactttacttcaggtcgaaagggaataacaaaatcggaactcgtaaaatcgcaatcaaaattgaaggattttac 8705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 61; Significance: 2e-26; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 118 - 202
Target Start/End: Complemental strand, 36430065 - 36429981
Alignment:
Q  118 caaaatcgatggattttacctaaaaaatttaatactaaatatacgttataaatggtatatagtcataaattacttagtttataag 202  Q
    |||||||||||||||||||||||||||   ||||||||||||| |||| ||||| ||||||||||||||||||||||||||||||    
T  36430065 caaaatcgatggattttacctaaaaaaaaaaatactaaatatatgttagaaatgatatatagtcataaattacttagtttataag 36429981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 106 - 202
Target Start/End: Original strand, 35565857 - 35565950
Alignment:
Q  106 taaaatcacaaccaaaatcgatggattttacctaaaaaatttaatactaaatatacgttataaatggtatatagtcataaattacttagtttataag 202  Q
    ||||||||||| |||||||||||||||||||| ||||||   ||||||||||||| ||||||||| |||||||||||||||| |||| |||||||||    
T  35565857 taaaatcacaatcaaaatcgatggattttaccaaaaaaa---aatactaaatatatgttataaattgtatatagtcataaatgactttgtttataag 35565950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 43 - 136
Target Start/End: Complemental strand, 20064080 - 20063987
Alignment:
Q  43 accaaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 136  Q
    |||||||||||||||||||||  | |||||||||| |||||||||||||||||||| ||||||||||||| ||| ||||||||| | |||||||    
T  20064080 accaaggttgtcaaaatcggggctttacttcaggttgaaagggaatagcaaaatcgagactcgtaaaatcgcaatcaaaatcgaagaattttac 20063987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 56 - 136
Target Start/End: Original strand, 27523881 - 27523961
Alignment:
Q  56 aaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 136  Q
    ||||||||| | ||||||| ||||||||||| ||||||||||||||||||||||||| ||| ||||||||| |||||||||    
T  27523881 aaatcgggactttacttcaagtcgaaagggagtagcaaaatcgggactcgtaaaatcgcaatcaaaatcgaaggattttac 27523961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 121 - 201
Target Start/End: Complemental strand, 31578217 - 31578138
Alignment:
Q  121 aatcgatggattttacctaaaaaatttaatactaaatatacgttataaatggtatatagtcataaattacttagtttataa 201  Q
    ||||||||||||||| | |||||| | ||||||||||||| |||||||||||||||||||||||||| |||||||||||||    
T  31578217 aatcgatggattttaaccaaaaaaat-aatactaaatatatgttataaatggtatatagtcataaatgacttagtttataa 31578138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 45 - 136
Target Start/End: Original strand, 19262090 - 19262181
Alignment:
Q  45 caaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 136  Q
    |||||||||| ||||||| | | ||||||| |||||| |||||||||||||||||||||||||||||| ||| |||||||||  ||||||||    
T  19262090 caaggttgtcgaaatcggaactttacttcaagtcgaatgggaatagcaaaatcgggactcgtaaaatcgcaatcaaaatcgaaagattttac 19262181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 45 - 135
Target Start/End: Original strand, 21869095 - 21869185
Alignment:
Q  45 caaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggatttta 135  Q
    |||||| ||||||||||||| | ||||||| ||||||||||||||| ||||||||||||| ||||||| |||  |||||||| ||||||||    
T  21869095 caaggtcgtcaaaatcgggactttacttcaagtcgaaagggaatagaaaaatcgggactcttaaaatcgcaattaaaatcgaaggatttta 21869185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 43 - 136
Target Start/End: Original strand, 20033994 - 20034087
Alignment:
Q  43 accaaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 136  Q
    ||||| ||| |||||||||||| | ||||||| ||||||||||| ||||||||||| ||||||||||||| ||| |||||| || |||||||||    
T  20033994 accaaagttatcaaaatcgggactttacttcaagtcgaaagggagtagcaaaatcgagactcgtaaaatcgcaatcaaaattgaaggattttac 20034087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 106 - 200
Target Start/End: Original strand, 15588754 - 15588844
Alignment:
Q  106 taaaatcacaaccaaaatcgatggattttacctaaaaaatttaatactaaatatacgttataaatggtatatagtcataaattacttagtttata 200  Q
    ||||||| ||| |||||||||||||||||||| ||||||  ||||||||||||||  | |||||||||||||| |||||||| ||||||||||||    
T  15588754 taaaatcgcaatcaaaatcgatggattttaccaaaaaaa--taatactaaatata--tgataaatggtatataatcataaatgacttagtttata 15588844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 103 - 202
Target Start/End: Original strand, 1690625 - 1690724
Alignment:
Q  103 tcgtaaaatcacaaccaaaatcgatggattttacctaaaaaatttaatactaaatatacgttataaatggtatatagtcataaattacttagtttataag 202  Q
    |||||||||| ||| ||||||||||  |||||||| |||||   ||||| ||||||||  ||||||||||||||||||||||||  ||||||||||||||    
T  1690625 tcgtaaaatcgcaatcaaaatcgataaattttaccaaaaaataataatattaaatatattttataaatggtatatagtcataaaagacttagtttataag 1690724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 45 - 136
Target Start/End: Original strand, 31237750 - 31237841
Alignment:
Q  45 caaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 136  Q
    |||| ||||||||||| ||| | |||||||| || ||||||||||| ||||||||||||||||||||| ||| ||| ||||| |||||||||    
T  31237750 caagattgtcaaaatcaggactttacttcagttcaaaagggaatagtaaaatcgggactcgtaaaatcgcaatcaatatcgaaggattttac 31237841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 46 - 136
Target Start/End: Complemental strand, 1405137 - 1405047
Alignment:
Q  46 aaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 136  Q
    |||||||||||||||| || | || || ||||| |||||||||||||||||||| |||| ||||||| ||| ||||||||| |||||||||    
T  1405137 aaggttgtcaaaatcgagactttaatttaggtcaaaagggaatagcaaaatcggtactcataaaatcgcaatcaaaatcgaaggattttac 1405047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 46 - 136
Target Start/End: Original strand, 25538920 - 25539010
Alignment:
Q  46 aaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 136  Q
    ||||||||||||||||| | | ||| ||||||||||||||||||| ||||||||| ||||||||||| ||| ||||||  | |||||||||    
T  25538920 aaggttgtcaaaatcggtactttacatcaggtcgaaagggaatagaaaaatcgggtctcgtaaaatcgcaatcaaaattaaaggattttac 25539010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 46 - 136
Target Start/End: Complemental strand, 30433169 - 30433079
Alignment:
Q  46 aaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 136  Q
    |||||||||||||||||||   ||||||||||||||| | ||||| ||||||||||||| ||||||| ||| |||||||||  ||||||||    
T  30433169 aaggttgtcaaaatcgggacattacttcaggtcgaaaagcaatagaaaaatcgggactcataaaatcgcaatcaaaatcgaatgattttac 30433079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 105 - 202
Target Start/End: Original strand, 31237875 - 31237973
Alignment:
Q  105 gtaaaatcacaaccaaaatcgatggattttacctaaaaaatttaatac-taaatatacgttataaatggtatatagtcataaattacttagtttataag 202  Q
    |||||||  ||| |||||||||||||||||||| |||||   |||||| | |||||| ||||||||||||||||| |||||||| ||||||||||||||    
T  31237875 gtaaaattgcaatcaaaatcgatggattttaccaaaaaataataatacatgaatatatgttataaatggtatataatcataaatgacttagtttataag 31237973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 44 - 136
Target Start/End: Complemental strand, 974695 - 974602
Alignment:
Q  44 ccaaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgg-gactcgtaaaatcacaaccaaaatcgatggattttac 136  Q
    |||||||| |||| ||||||| | ||||||| ||||||||||| ||||||||||||  |||||||||||| ||| ||||||||| |||||||||    
T  974695 ccaaggttatcaatatcgggactttacttcaagtcgaaagggagtagcaaaatcggaaactcgtaaaatcgcaatcaaaatcgaaggattttac 974602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 44 - 136
Target Start/End: Complemental strand, 7302138 - 7302046
Alignment:
Q  44 ccaaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 136  Q
    |||||||| |||||||||||| | ||||||| || ||| |||  ||||||||||||||||||||||||  ||| ||||||||| |||||||||    
T  7302138 ccaaggttatcaaaatcgggactttacttcaagttgaaggggggtagcaaaatcgggactcgtaaaattgcaatcaaaatcgaaggattttac 7302046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 45 - 136
Target Start/End: Complemental strand, 19245944 - 19245853
Alignment:
Q  45 caaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 136  Q
    |||||||||||||||||||||| | ||||| || |||||||||||||||||||   | |||||||||| ||| ||||||| | |||||||||    
T  19245944 caaggttgtcaaaatcgggattttgcttcaagttgaaagggaatagcaaaatcaaaaatcgtaaaatcgcaatcaaaatctaaggattttac 19245853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 41 - 187
Target Start/End: Complemental strand, 19492227 - 19492079
Alignment:
Q  41 taaccaaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttacctaa 140  Q
    |||| ||| ||||||||||   |||| | |||||||||||||| ||| | ||||||    | |||||||| |  || |||||||||||||||||||| ||    
T  19492227 taactaagattgtcaaaattaagattttgcttcaggtcgaaagagaacaacaaaattaaaaatcgtaaaaccgtaatcaaaatcgatggattttaccaaa 19492128  T
Q  141 aaaatt--taatactaaatatacgttataaatggtatatagtcataaat 187  Q
    |||| |  |||| ||||||||| ||||||||| ||||||||||||||||    
T  19492127 aaaaataataatgctaaatatatgttataaattgtatatagtcataaat 19492079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 103 - 198
Target Start/End: Complemental strand, 34841813 - 34841717
Alignment:
Q  103 tcgtaaaatcacaaccaaaatcgatggattttacctaaa-aaatttaatactaaatatacgttataaatggtatatagtcataaattacttagttta 198  Q
    |||||||||| ||| ||||||||||||||| || | ||| |||  ||||| |||||||| ||||||||| |||||||||||||||| ||| ||||||    
T  34841813 tcgtaaaatcgcaatcaaaatcgatggattctatccaaacaaaaataataataaatatatgttataaattgtatatagtcataaataactcagttta 34841717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 87 - 193
Target Start/End: Original strand, 21869215 - 21869321
Alignment:
Q  87 atagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttacctaaa-aaatttaatactaaatatacgttataaatggtatatagtcataa 185  Q
    |||||||||||| ||||||||||||| ||| ||||||||||| ||| |||| ||| |||  | || ||||||||| ||||||||| | ||||||||||||    
T  21869215 atagcaaaatcgagactcgtaaaatcccaatcaaaatcgatg-attctaccaaaacaaaaattatgctaaatatatgttataaattgcatatagtcataa 21869313  T
Q  186 attactta 193  Q
    || |||||    
T  21869314 ataactta 21869321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 46 - 134
Target Start/End: Complemental strand, 8428576 - 8428488
Alignment:
Q  46 aaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggatttt 134  Q
    ||||||||||||||||||||| | ||| ||||||||||||||||| ||||||   | |  ||||||| ||| ||||||||| |||||||    
T  8428576 aaggttgtcaaaatcgggattttgctttaggtcgaaagggaatagaaaaatcaaaaattctaaaatcgcaatcaaaatcgaaggatttt 8428488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 105 - 169
Target Start/End: Complemental strand, 30433045 - 30432981
Alignment:
Q  105 gtaaaatcacaaccaaaatcgatggattttacctaaaaaatttaatactaaatatacgttataaa 169  Q
    |||||||| ||| |||||| |||||||||||||  ||||| ||||||||||||||| ||||||||    
T  30433045 gtaaaatcgcaatcaaaatagatggattttaccccaaaaaattaatactaaatatatgttataaa 30432981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 87 - 193
Target Start/End: Complemental strand, 974573 - 974467
Alignment:
Q  87 atagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttacctaaa-aaatttaatactaaatatacgttataaatggtatatagtcataa 185  Q
    ||||| || ||||||||||||||||| ||| ||||||||| ||||| |||| ||| |||  ||||  |||||||| ||||||||| | ||||||||||||    
T  974573 atagcgaagtcgggactcgtaaaatcgcaatcaaaatcga-ggattctaccaaaacaaaaataatgttaaatatatgttataaattgcatatagtcataa 974475  T
Q  186 attactta 193  Q
    || |||||    
T  974474 atgactta 974467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 85 - 187
Target Start/End: Original strand, 20034114 - 20034216
Alignment:
Q  85 gaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttacctaaa-aaatttaatactaaatatacgttataaatggtatatagtcat 183  Q
    |||||||||| ||||||||||||||||| ||| ||||||||| ||||| |||| ||| |||  ||||  |||||||| ||||||||| | ||||| ||||    
T  20034114 gaatagcaaagtcgggactcgtaaaatcgcaatcaaaatcga-ggattctaccaaaacaaaaataatgttaaatatatgttataaattgcatatactcat 20034212  T
Q  184 aaat 187  Q
    ||||    
T  20034213 aaat 20034216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 45 - 139
Target Start/End: Original strand, 23863264 - 23863357
Alignment:
Q  45 caaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttaccta 139  Q
    ||||||||| ||||| ||| || | ||||| |||||||| ||| |||||||||   | |||||||||| ||||||||||||||||||||| ||||    
T  23863264 caaggttgttaaaattgggttt-tgcttcaagtcgaaagagaaaagcaaaatcaacattcgtaaaatcgcaaccaaaatcgatggattttgccta 23863357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 103 - 171
Target Start/End: Original strand, 13502570 - 13502639
Alignment:
Q  103 tcgtaaaatcacaaccaaaatcgatggattttacctaaa-aaatttaatactaaatatacgttataaatg 171  Q
    |||||||||| ||| |||||||||||||||||||| ||| |||  ||||| |||||||| ||||||||||    
T  13502570 tcgtaaaatcgcaatcaaaatcgatggattttaccaaaacaaaaataatattaaatatatgttataaatg 13502639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 118 - 198
Target Start/End: Complemental strand, 31023519 - 31023438
Alignment:
Q  118 caaaatcgatggattttacctaaa-aaatttaatactaaatatacgttataaatggtatatagtcataaattacttagttta 198  Q
    |||||||||||||||||||| ||| |||  ||||  |||||||| ||||||||| ||| ||||||||||| || ||||||||    
T  31023519 caaaatcgatggattttaccaaaataaaaataatgttaaatatatgttataaatagtaaatagtcataaactaattagttta 31023438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 79 - 136
Target Start/End: Complemental strand, 34578210 - 34578153
Alignment:
Q  79 gaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 136  Q
    |||||||| ||||||||||||||||| ||||||| ||| |||||| || |||||||||    
T  34578210 gaaagggagtagcaaaatcgggactcataaaatcgcaatcaaaattgaaggattttac 34578153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 91 - 187
Target Start/End: Complemental strand, 41002256 - 41002160
Alignment:
Q  91 caaaatcgggactcgtaaaatcacaaccaaaatcgatggattttacctaaa-aaatttaatactaaatatacgttataaatggtatatagtcataaat 187  Q
    ||||||||| ||||||||||||  || ||||||||| ||||| |||| ||| |||  |||| ||||||||| ||||||||| | ||||||||||||||    
T  41002256 caaaatcggaactcgtaaaatcgtaatcaaaatcga-ggattctaccaaaacaaaaataatgctaaatatatgttataaattgcatatagtcataaat 41002160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 136
Target Start/End: Original strand, 15588632 - 15588720
Alignment:
Q  48 ggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 136  Q
    ||||||||| || | |||| | |||||||||||||| ||| || |||||||  | || ||||||| ||||||||||||| |||||||||    
T  15588632 ggttgtcaatattgagattttgcttcaggtcgaaagagaaaagaaaaatcgacaatcataaaatcgcaaccaaaatcgaaggattttac 15588720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 162 - 202
Target Start/End: Complemental strand, 30432592 - 30432552
Alignment:
Q  162 gttataaatggtatatagtcataaattacttagtttataag 202  Q
    ||||||||||||||||||| |||||| ||||||||||||||    
T  30432592 gttataaatggtatatagtaataaatgacttagtttataag 30432552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 87 - 170
Target Start/End: Complemental strand, 34578124 - 34578041
Alignment:
Q  87 atagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttacctaaa-aaatttaatactaaatatacgttataaat 170  Q
    |||||||||||||||||||||||||| ||| ||||||||| ||||| |||| ||| |||  ||||  |||||||| |||||||||    
T  34578124 atagcaaaatcgggactcgtaaaatcgcaatcaaaatcga-ggattctaccaaaacaaaaataatgttaaatatatgttataaat 34578041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 105 - 144
Target Start/End: Complemental strand, 20063953 - 20063914
Alignment:
Q  105 gtaaaatcacaaccaaaatcgatggattttacctaaaaaa 144  Q
    |||||||| |||||||||||||||||||||||| ||||||    
T  20063953 gtaaaatcgcaaccaaaatcgatggattttaccaaaaaaa 20063914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 202
Target Start/End: Complemental strand, 1404966 - 1404916
Alignment:
Q  152 ctaaatatacgttataaatggtatatagtcataaattacttagtttataag 202  Q
    |||| |||| |||||||||||| ||||||||||||| ||||||| ||||||    
T  1404966 ctaagtatatgttataaatggtgtatagtcataaatgacttagtatataag 1404916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 105 - 175
Target Start/End: Original strand, 19262215 - 19262285
Alignment:
Q  105 gtaaaatcacaaccaaaatcgatggattttacctaaaaaatttaatactaaatatacgttataaatggtat 175  Q
    |||||||| ||| ||||||||| ||| |||||| |||||   ||||||||| |||| ||||||||||||||    
T  19262215 gtaaaatcgcaatcaaaatcgacggactttaccaaaaaataataatactaactatatgttataaatggtat 19262285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 105 - 198
Target Start/End: Original strand, 25539044 - 25539138
Alignment:
Q  105 gtaaaatcacaaccaaaatcgatggattttacctaaaaa-atttaatactaaatatacgttataaatggtatatagtcataaattacttagttta 198  Q
    |||||||  ||| |||||||||| ||||||||| ||| | |  |||| ||||||||| |||||| || |||||||||||||||| ||| ||||||    
T  25539044 gtaaaattgcaatcaaaatcgatagattttaccaaaacagaaataatgctaaatatatgttatatattgtatatagtcataaatgactcagttta 25539138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 43 - 111
Target Start/End: Original strand, 38299 - 38367
Alignment:
Q  43 accaaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaat 111  Q
    |||||||||||||||||||||| | ||||||| ||||||||| ||||||||||||||||||||||||||    
T  38299 accaaggttgtcaaaatcgggactttacttcaagtcgaaaggaaatagcaaaatcgggactcgtaaaat 38367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 52; Significance: 5e-21; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 44 - 135
Target Start/End: Original strand, 14699 - 14790
Alignment:
Q  44 ccaaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggatttta 135  Q
    |||||||| |||||||||||  | ||||||| ||||||| ||| ||||||||||||||||||||||||| ||| ||||||||| ||||||||    
T  14699 ccaaggttatcaaaatcggggctttacttcaagtcgaaatggagtagcaaaatcgggactcgtaaaatcgcaatcaaaatcgaaggatttta 14790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 52; Significance: 5e-21; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 45 - 136
Target Start/End: Original strand, 56199 - 56290
Alignment:
Q  45 caaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 136  Q
    ||||||||||||||||| || | ||||||||||||||||||||||||||||||| |||   ||||||| ||| ||||||||| |||||||||    
T  56199 caaggttgtcaaaatcgagactttacttcaggtcgaaagggaatagcaaaatcgagacatctaaaatcgcaatcaaaatcgaaggattttac 56290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 202
Target Start/End: Original strand, 58738 - 58778
Alignment:
Q  162 gttataaatggtatatagtcataaattacttagtttataag 202  Q
    ||||||| |||||||||||||||||| | ||||||||||||    
T  58738 gttataagtggtatatagtcataaatgatttagtttataag 58778  T

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Target: scaffold0417 (Bit Score: 46; Significance: 2e-17; HSPs: 2)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 109 - 202
Target Start/End: Original strand, 7358 - 7451
Alignment:
Q  109 aatcacaaccaaaatcgatggattttacctaaaaaatttaatactaaatatacgttataaatggtatatagtcataaattacttagtttataag 202  Q
    |||| ||| ||||||||||| |||||||| |||||   |||||||||||||| ||| ||| ||||||||| ||||||||||||| |||||||||    
T  7358 aatcgcaatcaaaatcgatgaattttaccaaaaaacaataatactaaatatatgttctaattggtatatattcataaattacttcgtttataag 7451  T

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Target: scaffold0417; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 136
Target Start/End: Original strand, 7268 - 7320
Alignment:
Q  84 ggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 136  Q
    ||||||||||||||| |||| ||||||||  || ||||||||| |||||||||    
T  7268 ggaatagcaaaatcgagacttgtaaaatcgtaatcaaaatcgaaggattttac 7320  T

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Target: scaffold2084 (Bit Score: 45; Significance: 8e-17; HSPs: 1)
Name: scaffold2084
Description:

Target: scaffold2084; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 44 - 136
Target Start/End: Complemental strand, 184 - 92
Alignment:
Q  44 ccaaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 136  Q
    |||||||| |||||||||||| | ||||||| ||| ||||||| ||||||||||||||||||||||||   ||  |||||||| |||||||||    
T  184 ccaaggttatcaaaatcgggactttacttcaagtcaaaagggagtagcaaaatcgggactcgtaaaattgtaattaaaatcgaaggattttac 92  T

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Target: scaffold0603 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0603
Description:

Target: scaffold0603; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 105 - 198
Target Start/End: Original strand, 8858 - 8952
Alignment:
Q  105 gtaaaatcacaaccaaaatcgatggattttacctaaa-aaatttaatactaaatatacgttataaatggtatatagtcataaattacttagttta 198  Q
    |||||||| ||| |||||||||||||||||||| ||| |||  |||| ||||||||| ||||||| | |||||||||||||||| ||| ||||||    
T  8858 gtaaaatcgcaatcaaaatcgatggattttaccaaaacaaagataatgctaaatatatgttataagttgtatatagtcataaatgactcagttta 8952  T

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Target: scaffold0526 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 2)
Name: scaffold0526
Description:

Target: scaffold0526; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 87 - 187
Target Start/End: Complemental strand, 8391 - 8292
Alignment:
Q  87 atagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttacctaaa-aaatttaatactaaatatacgttataaatggtatatagtcataa 185  Q
    |||||||| ||||||||||||||||| ||| ||||||||| ||||| |||| ||| |||| |||||||||||||| | ||||||| | ||||||||||||    
T  8391 atagcaaagtcgggactcgtaaaatcgcaatcaaaatcga-ggattctaccaaaacaaatataatactaaatatatg-tataaattgcatatagtcataa 8294  T

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Target: scaffold0526; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 136
Target Start/End: Complemental strand, 8511 - 8420
Alignment:
Q  45 caaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 136  Q
    ||||||| |||||||||||| | ||||| | ||||||||||| ||| ||||| ||||||| ||||||  ||  ||||||||| |||||||||    
T  8511 caaggttatcaaaatcgggagtttactttaagtcgaaagggagtagtaaaattgggactcataaaattgcagtcaaaatcgaaggattttac 8420  T

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Target: scaffold0061 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 45 - 111
Target Start/End: Original strand, 76083 - 76149
Alignment:
Q  45 caaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaat 111  Q
    |||||||||||||||||||| | ||||||  ||||||||| |||||||||  |||||||||||||||    
T  76083 caaggttgtcaaaatcgggactttacttccagtcgaaaggaaatagcaaacccgggactcgtaaaat 76149  T

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Target: scaffold0042 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 103 - 186
Target Start/End: Original strand, 93602 - 93686
Alignment:
Q  103 tcgtaaaatcacaaccaaaatcgatggattttacctaaaaaatttaatactaaatatacgttataaatggtata-tagtcataaa 186  Q
    |||||||||| ||| |||||||||||||||||||| |||| |  || ||||||||||| ||||| ||| ||||| ||||||||||    
T  93602 tcgtaaaatcgcaatcaaaatcgatggattttaccaaaaacaaatattactaaatatatgttatgaatcgtatattagtcataaa 93686  T

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Target: scaffold0182 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 68 - 111
Target Start/End: Complemental strand, 24718 - 24675
Alignment:
Q  68 tacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaat 111  Q
    ||||||| ||||||||||| ||||||||||||||||||||||||    
T  24718 tacttcaagtcgaaagggagtagcaaaatcgggactcgtaaaat 24675  T

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Target: scaffold0027 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 87 - 187
Target Start/End: Original strand, 133009 - 133109
Alignment:
Q  87 atagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttacctaaa-aaatttaatactaaatatacgttataaatggtatatagtcataa 185  Q
    |||||||| ||||||||||||||||| ||| ||||||| | ||||| |||  ||| ||| |||||  |||||||| ||||||||| | ||||||||||||    
T  133009 atagcaaagtcgggactcgtaaaatcgcaatcaaaatc-aaggattctactaaaacaaaattaatgttaaatatatgttataaattgcatatagtcataa 133107  T
Q  186 at 187  Q
    ||    
T  133108 at 133109  T

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Target: scaffold0510 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0510
Description:

Target: scaffold0510; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 136
Target Start/End: Original strand, 3 - 69
Alignment:
Q  70 cttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 136  Q
    |||||||||||| | ||| ||||||||||  | ||||||||||  |||||||||||| |||||||||    
T  3 cttcaggtcgaatgagaagagcaaaatcgacaatcgtaaaatcgaaaccaaaatcgaaggattttac 69  T

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Target: scaffold0048 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 136
Target Start/End: Original strand, 61089 - 61179
Alignment:
Q  46 aaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 136  Q
    ||||||| ||||||||||||| | ||||||||| |||| ||| || |||||    | |||||||||||||| ||||||||| | |||||||    
T  61089 aaggttgccaaaatcgggattttgcttcaggtcaaaagagaaaagtaaaatttaaaatcgtaaaatcacaatcaaaatcgaagaattttac 61179  T

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Target: scaffold0028 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 136
Target Start/End: Complemental strand, 145942 - 145852
Alignment:
Q  46 aaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 136  Q
    |||||||||||||| | |||| | ||||||||||||||  |||||  ||||||  | |||||||||  ||| ||||||||| |||||||||    
T  145942 aaggttgtcaaaattgagattttgcttcaggtcgaaagaaaatagttaaatcgaaaatcgtaaaatagcaatcaaaatcgaaggattttac 145852  T

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