View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16002_high_10 (Length: 202)
Name: NF16002_high_10
Description: NF16002
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16002_high_10 |
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Alignment Details
Target: chr5 (Bit Score: 151; Significance: 4e-80; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 151; E-Value: 4e-80
Query Start/End: Original strand, 11 - 185
Target Start/End: Complemental strand, 37942222 - 37942049
Alignment:
| Q |
11 |
gtagcataggacctctctgtgtgtggaatgtgattaatggaagcccctttgaaatatgttggatccccatcttatctaaacctatattcagttggttgca |
110 |
Q |
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| T |
37942222 |
gtagcataagacctctctgtgtgtggaatgtgattaatggaagaccctttgaaatatggtggatccccat-ttatctaaacctatattcagttggttgca |
37942124 |
T |
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| Q |
111 |
catggaagattcttgttgatttgattaacgataatcacatgtttagtggtactactcccacactggtgagatatg |
185 |
Q |
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| T |
37942123 |
catggaagattcttgttgatttgattaacgataatcacatgtttagtggtactactcccacactgatgagatatg |
37942049 |
T |
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