View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16002_low_1 (Length: 725)

Name: NF16002_low_1
Description: NF16002
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16002_low_1
NF16002_low_1
[»] chr2 (13 HSPs)
chr2 (443-719)||(9909450-9909742)
chr2 (18-257)||(9896913-9897152)
chr2 (253-440)||(9909013-9909200)
chr2 (342-435)||(33174968-33175061)
chr2 (341-435)||(8073901-8073995)
chr2 (370-435)||(1707079-1707144)
chr2 (342-435)||(29259663-29259756)
chr2 (342-435)||(30966244-30966337)
chr2 (342-435)||(30966700-30966793)
chr2 (343-435)||(83028-83120)
chr2 (342-435)||(1912535-1912628)
chr2 (342-435)||(5399860-5399953)
chr2 (342-435)||(18098921-18099014)
[»] chr1 (8 HSPs)
chr1 (255-432)||(46337884-46338061)
chr1 (338-432)||(31822709-31822803)
chr1 (342-435)||(43057566-43057659)
chr1 (338-435)||(20061234-20061331)
chr1 (342-435)||(50002328-50002421)
chr1 (343-435)||(7548102-7548194)
chr1 (342-435)||(35760957-35761050)
chr1 (342-435)||(52250216-52250309)
[»] chr5 (12 HSPs)
chr5 (341-435)||(24182288-24182382)
chr5 (338-435)||(10926989-10927086)
chr5 (342-435)||(10927446-10927539)
chr5 (342-435)||(189078-189171)
chr5 (342-435)||(2193826-2193919)
chr5 (338-435)||(8642077-8642174)
chr5 (342-435)||(11160724-11160817)
chr5 (342-435)||(20039517-20039610)
chr5 (343-435)||(17445498-17445590)
chr5 (370-435)||(1821944-1822009)
chr5 (342-435)||(2473969-2474062)
chr5 (342-435)||(3886644-3886737)
[»] chr7 (11 HSPs)
chr7 (338-435)||(42515550-42515647)
chr7 (342-435)||(6747641-6747734)
chr7 (338-435)||(679823-679919)
chr7 (342-435)||(2611695-2611788)
chr7 (338-435)||(2941800-2941897)
chr7 (342-435)||(42515102-42515195)
chr7 (368-432)||(30572661-30572724)
chr7 (342-435)||(2193266-2193359)
chr7 (342-435)||(6719117-6719210)
chr7 (342-435)||(25182371-25182464)
chr7 (342-435)||(28495864-28495957)
[»] chr4 (16 HSPs)
chr4 (338-435)||(21220368-21220465)
chr4 (347-432)||(31817438-31817523)
chr4 (342-435)||(4127926-4128019)
chr4 (338-435)||(8467837-8467934)
chr4 (342-431)||(50399034-50399123)
chr4 (343-435)||(29628704-29628796)
chr4 (342-435)||(3169216-3169309)
chr4 (342-435)||(9423895-9423988)
chr4 (342-435)||(44471362-44471455)
chr4 (342-435)||(50398575-50398668)
chr4 (342-435)||(51331318-51331411)
chr4 (371-435)||(45682242-45682306)
chr4 (338-435)||(1464153-1464250)
chr4 (342-435)||(14572187-14572280)
chr4 (342-435)||(21067292-21067385)
chr4 (342-435)||(44470911-44471004)
[»] chr3 (13 HSPs)
chr3 (346-435)||(25230291-25230380)
chr3 (342-435)||(25230748-25230841)
chr3 (346-435)||(25237878-25237967)
chr3 (342-435)||(25238335-25238428)
chr3 (344-435)||(25239120-25239211)
chr3 (342-435)||(30529697-30529790)
chr3 (342-435)||(31284319-31284412)
chr3 (343-435)||(20885160-20885252)
chr3 (342-435)||(11180077-11180170)
chr3 (342-435)||(14813959-14814052)
chr3 (338-435)||(39640943-39641040)
chr3 (342-435)||(41472311-41472403)
chr3 (342-435)||(50347756-50347849)
[»] scaffold1138 (1 HSPs)
scaffold1138 (271-435)||(740-904)
[»] chr8 (7 HSPs)
chr8 (342-435)||(34308522-34308615)
chr8 (342-425)||(34308992-34309075)
chr8 (338-432)||(27819292-27819386)
chr8 (342-435)||(2044068-2044161)
chr8 (342-435)||(6464953-6465046)
chr8 (342-435)||(22705182-22705275)
chr8 (343-435)||(28375097-28375189)
[»] chr6 (5 HSPs)
chr6 (342-435)||(20896731-20896824)
chr6 (342-435)||(31821735-31821828)
chr6 (370-435)||(13492827-13492892)
chr6 (342-432)||(6330958-6331048)
chr6 (338-435)||(20735701-20735798)
[»] scaffold0047 (1 HSPs)
scaffold0047 (338-431)||(17645-17738)
[»] scaffold0168 (1 HSPs)
scaffold0168 (343-435)||(2753-2845)
[»] scaffold0499 (1 HSPs)
scaffold0499 (370-435)||(2094-2159)
[»] scaffold0040 (1 HSPs)
scaffold0040 (370-435)||(2253-2318)
[»] scaffold0007 (1 HSPs)
scaffold0007 (342-435)||(142317-142410)
[»] scaffold0005 (1 HSPs)
scaffold0005 (342-435)||(245096-245189)


Alignment Details
Target: chr2 (Bit Score: 224; Significance: 1e-123; HSPs: 13)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 443 - 719
Target Start/End: Original strand, 9909450 - 9909742
Alignment:
Q  443 cctagaaattttggtactcccttcttcatgcagataatattatggtgttttgtaaagggtaaaaagacagcctttgagtcacctatccagttcattcgtg 542  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  9909450 cctagaaattttggtactcccttcttcatgcagataatattatggtgttttgtaaagggtaaaaagacagcctttgagtcacttatccagctcattcgtg 9909549  T
Q  543 aatatagtgatgttttgtttagaagacatggatttctacaactcataatatttttcacgac----------------ttgagatcctttgctttctataa 626  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||                |||||||||||||||||||||||    
T  9909550 aatatagtgatgttttgtttagaagacatggatttctacaactcataatatttttcacgacatggtttaaaaatattttgagatcctttgctttctataa 9909649  T
Q  627 atgagttatagtattttatcttttaaagatgcttatattactcttcatacactaggttcgtagattaagggcaagaagattttcttcgacatc 719  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||    
T  9909650 atgagttatagtattttatcttttaaagatgcttatattactcttcatacactaggttcgtagattaagggcaagaagattttgtttgacatc 9909742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 18 - 257
Target Start/End: Original strand, 9896913 - 9897152
Alignment:
Q  18 taatattgctctcaaacttgacatccataaagtttttgacaccgttgattggaattttcttcttagtgttttgacaacttttggtttcaaccctgggttt 117  Q
    |||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9896913 taatattgctctcaaacttgacatccataacgtttttgacacccttgattggaattttcttcttagtgttttgacaacttttggtttcaaccctgggttt 9897012  T
Q  118 tgtaattgggttcatgtgattcttaaatctgacatgttttctatcttggttacctggtaactaacaaatcattttgcaagtatgcgttgagtgtttcaag 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||| ||||||||||||||||||||||||||||||||||||||    
T  9897013 tgtaattgggttcatgtgattcttaaatctgacatgttttctatcttggttacatggcaaccaacaaatcattttgcaagtatgcgttgagtgtttcaag 9897112  T
Q  218 gtgatcctctaacgccaaaggctgatgagaacgtggagtg 257  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  9897113 gtgatcctctaacgccaaaggctgacgagaacgtggagtg 9897152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 160; E-Value: 7e-85
Query Start/End: Original strand, 253 - 440
Target Start/End: Original strand, 9909013 - 9909200
Alignment:
Q  253 gagtgaccgtcgatgaacatggcacatgcaatgagctgctcctgacatgcttctaggaaattgacaaatgaatgaaccaatttatatcagaatgagaggg 352  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||    
T  9909013 gagtgatcgtcgatgaacatggcacatgcaatgagctgctcctgacatgcttttaggaaattgacaaatgaatgaaccaattcatatcagaatgagaggg 9909112  T
Q  353 atcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagattcaac 440  Q
    ||| ||| |||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  9909113 atcctgaaatcgtataagtatgagactatatggttgaaggagggtttataatgattaattggtactacctataccaacaagattcaac 9909200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 342 - 435
Target Start/End: Original strand, 33174968 - 33175061
Alignment:
Q  342 gaatgagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 435  Q
    |||||||||||||| ||||  ||| || ||||| ||||| ||| ||||||||||| ||||||  |||  ||||||||||||||| |||||||||    
T  33174968 gaatgagagggatcctgaggccgtgtaggtatgggactacatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagat 33175061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 341 - 435
Target Start/End: Original strand, 8073901 - 8073995
Alignment:
Q  341 agaatgagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 435  Q
    |||||||||||||||||||||| ||  | ||||| | ||||| | ||||||| ||  ||||||  |||  |||||||||||||||||||||||||    
T  8073901 agaatgagagggatcatgagattgtgcaggtatgggtctataaggttgaagggagacttataagaattgtttggtactacctataccaacaagat 8073995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 370 - 435
Target Start/End: Original strand, 1707079 - 1707144
Alignment:
Q  370 gtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 435  Q
    ||||||||||| ||||||||||||||  ||||||  |||  ||||||||||||||| |||||||||    
T  1707079 gtatgagactacatgattgaaggaagacttataagaattgtttggtactacctatatcaacaagat 1707144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 342 - 435
Target Start/End: Complemental strand, 29259756 - 29259663
Alignment:
Q  342 gaatgagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 435  Q
    |||||||||||||| ||||| |||| ||||||| ||||  ||| ||||||||||| |||| |  |||  |||||||||| |||| |||||||||    
T  29259756 gaatgagagggatcctgagaccgtacaagtatgggactgcatggttgaaggaaggcttattaaaattgtttggtactacatatatcaacaagat 29259663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 342 - 435
Target Start/End: Original strand, 30966244 - 30966337
Alignment:
Q  342 gaatgagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 435  Q
    |||||||||||||| ||||  |||| | ||||| ||||  ||| ||||||||||| ||||||  |||  ||||||||||||||| |||||||||    
T  30966244 gaatgagagggatcctgaggccgtacaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagat 30966337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 342 - 435
Target Start/End: Original strand, 30966700 - 30966793
Alignment:
Q  342 gaatgagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 435  Q
    |||||||||||||| ||||  |||| | ||||| ||||  ||| ||||||||||| ||||||  |||  ||||||||||||||| |||||||||    
T  30966700 gaatgagagggatcctgaggccgtacatgtatgggactgcatggttgaaggaaggattataagaattgtttggtactacctatatcaacaagat 30966793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 343 - 435
Target Start/End: Original strand, 83028 - 83120
Alignment:
Q  343 aatgagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 435  Q
    ||||||||||||| |||||| ||  | ||||||||||| ||| ||||||| | | ||||||  ||   |||||||||||||||||||||||||    
T  83028 aatgagagggatcctgagattgtgcaggtatgagactacatggttgaaggtatgcttataagaatcgtttggtactacctataccaacaagat 83120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 342 - 435
Target Start/End: Original strand, 1912535 - 1912628
Alignment:
Q  342 gaatgagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 435  Q
    |||||||||||||| |||| |  | || ||||||||||| ||| ||||| | || |||||||  |||  ||||||||||||||| |||||||||    
T  1912535 gaatgagagggatcctgaggttatgtaggtatgagactacatggttgaaagtagatttataagaattgtttggtactacctatatcaacaagat 1912628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 342 - 435
Target Start/End: Complemental strand, 5399953 - 5399860
Alignment:
Q  342 gaatgagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 435  Q
    |||||||||||||| |||| ||||  ||||||| || | |||| || |||| ||| ||||||  |||  ||||||||||||||| |||||||||    
T  5399953 gaatgagagggatcttgaggtcgtgcaagtatgggagtgtatggtttaagggaggcttataagaattgtttggtactacctatatcaacaagat 5399860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 342 - 435
Target Start/End: Complemental strand, 18099014 - 18098921
Alignment:
Q  342 gaatgagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 435  Q
    |||||||||| ||| ||||  ||| || ||||||||||| ||| ||||||| | | ||||||  |||  ||||||||||||||| |||||||||    
T  18099014 gaatgagaggaatcctgaggccgtgtaggtatgagactacatggttgaagggatgcttataagaattgtttggtactacctatatcaacaagat 18098921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 54; Significance: 1e-21; HSPs: 8)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 255 - 432
Target Start/End: Complemental strand, 46338061 - 46337884
Alignment:
Q  255 gtgaccgtcgatgaacatggcacatgcaatgagctgctcctgacatgcttctaggaaattgacaaatgaatgaaccaatttatatcagaatgagagggat 354  Q
    |||| ||||||||  |||||||| |||||||||| |||||||| || ||| |||| ||  |||| ||||||||||||| | ||||||||||||||| |||    
T  46338061 gtgatcgtcgatgggcatggcacgtgcaatgagcggctcctgatatacttttaggcaaacgacacatgaatgaaccaaatcatatcagaatgagagagat 46337962  T
Q  355 catgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaa 432  Q
    | |||| |||| |||||||  |||||||   || |||||  | | |||| ||||||||| |||||| |||||||||||    
T  46337961 cttgaggtcgtgtaagtattggactatacagtttaaggagagctcataaggattaattgatactacatataccaacaa 46337884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 338 - 432
Target Start/End: Complemental strand, 31822803 - 31822709
Alignment:
Q  338 atcagaatgagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaa 432  Q
    |||||||||||||||||||||||  ||| || ||||||||||| ||| |||||||||| |||||||  |||| |||||||||| |||| ||||||    
T  31822803 atcagaatgagagggatcatgaggccgtgtaggtatgagactacatggttgaaggaagatttataagaattatttggtactacatatatcaacaa 31822709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 342 - 435
Target Start/End: Complemental strand, 43057659 - 43057566
Alignment:
Q  342 gaatgagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 435  Q
    |||||||||||||| ||||  ||| || ||||||||||| ||| ||||||||||| ||||||  |||  |||||||||||||||  ||||||||    
T  43057659 gaatgagagggatcctgaggccgtgtaggtatgagactacatggttgaaggaaggcttataagaattgtttggtactacctatattaacaagat 43057566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 338 - 435
Target Start/End: Complemental strand, 20061331 - 20061234
Alignment:
Q  338 atcagaatgagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 435  Q
    |||||||||||||||||| |||| ||||  | ||||| ||||  ||| ||||||||| | ||||||  |||  ||||||||||||||| |||||||||    
T  20061331 atcagaatgagagggatcctgaggtcgtgcaggtatgggactgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagat 20061234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 342 - 435
Target Start/End: Complemental strand, 50002421 - 50002328
Alignment:
Q  342 gaatgagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 435  Q
    |||||||||||||||||||  ||| || | ||| ||||| ||| ||||||||||| ||||||  |||  |||||||||||| || |||||||||    
T  50002421 gaatgagagggatcatgaggccgtgtaggcatgggactacatggttgaaggaaggcttataagaattgtttggtactacctttatcaacaagat 50002328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 343 - 435
Target Start/End: Original strand, 7548102 - 7548194
Alignment:
Q  343 aatgagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 435  Q
    ||||||||||||||||||  ||| || ||||||||||| |||||| |||||||  ||||||  |||  |||||| || ||||| |||||||||    
T  7548102 aatgagagggatcatgaggccgtgtaggtatgagactacatgattaaaggaagacttataaaaattgtttggtattaactatatcaacaagat 7548194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 342 - 435
Target Start/End: Complemental strand, 35761050 - 35760957
Alignment:
Q  342 gaatgagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 435  Q
    |||||||||||||| ||||  |||  | ||||||||||  ||| ||||||||| | ||||||  |||  ||||||||||||||| |||||||||    
T  35761050 gaatgagagggatcctgaggccgtgcaggtatgagactgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagat 35760957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 342 - 435
Target Start/End: Original strand, 52250216 - 52250309
Alignment:
Q  342 gaatgagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 435  Q
    |||||||||||||||||||  | | || ||||| ||||| ||| | ||||||||| ||||||  |||  | ||||||||||||| |||||||||    
T  52250216 gaatgagagggatcatgaggccttgtaggtatgggactacatggtcgaaggaaggcttataagaattgttgggtactacctatatcaacaagat 52250309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 47; Significance: 2e-17; HSPs: 12)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 341 - 435
Target Start/End: Complemental strand, 24182382 - 24182288
Alignment:
Q  341 agaatgagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 435  Q
    ||||||||||||||| ||||| |||  ||||||||||| | ||| ||||||||||| ||||||  |||| ||||||||| |||||||||||||||    
T  24182382 agaatgagagggatcttgagaacgtgcaagtatgagacgaaatggttgaaggaaggcttataagaattatttggtactatctataccaacaagat 24182288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 338 - 435
Target Start/End: Complemental strand, 10927086 - 10926989
Alignment:
Q  338 atcagaatgagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 435  Q
    |||||||||||||||||| |||| |||| || ||||| ||||| ||| ||||||||||| ||||||  |||  ||||||||||||||| |||||||||    
T  10927086 atcagaatgagagggatcctgaggtcgtgtaggtatgggactacatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagat 10926989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 342 - 435
Target Start/End: Complemental strand, 10927539 - 10927446
Alignment:
Q  342 gaatgagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 435  Q
    |||||||||||||| ||||  ||| || ||||||||||| ||| ||||||||||| ||||||  |||  ||||||||||||||| |||||||||    
T  10927539 gaatgagagggatcttgaggccgtgtaggtatgagactacatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagat 10927446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 342 - 435
Target Start/End: Original strand, 189078 - 189171
Alignment:
Q  342 gaatgagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 435  Q
    |||||||||||||| ||||  |||| | ||||| ||||  ||| ||||||||||| ||||||  |||  ||||||||||||||| |||||||||    
T  189078 gaatgagagggatcctgaggccgtacatgtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagat 189171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 342 - 435
Target Start/End: Original strand, 2193826 - 2193919
Alignment:
Q  342 gaatgagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 435  Q
    |||||||||||||||||||  | | || ||||| ||||| ||| ||||||||||| ||||||  |||  | ||||||||||||| |||||||||    
T  2193826 gaatgagagggatcatgaggccttgtaggtatgggactacatggttgaaggaaggcttataagaattgttgggtactacctatatcaacaagat 2193919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 338 - 435
Target Start/End: Complemental strand, 8642174 - 8642077
Alignment:
Q  338 atcagaatgagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 435  Q
    |||||||||||||||||| | ||  |||  | ||||| ||||  ||| ||||||||||| ||||||  |||| ||||||||||||||| |||||||||    
T  8642174 atcagaatgagagggatcctaaggccgtgcaggtatgggactgcatggttgaaggaaggcttataagaattatttggtactacctatatcaacaagat 8642077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 342 - 435
Target Start/End: Complemental strand, 11160817 - 11160724
Alignment:
Q  342 gaatgagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 435  Q
    ||||||||||||||||||  |||| || |||||| |||| ||  ||||||||||| ||||||| |||  ||||||||| ||||  |||||||||    
T  11160817 gaatgagagggatcatgaagtcgtgtaggtatgacactacatagttgaaggaaggcttataataattgtttggtactatctatgtcaacaagat 11160724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 342 - 435
Target Start/End: Complemental strand, 20039610 - 20039517
Alignment:
Q  342 gaatgagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 435  Q
    |||||||||||||||||||  ||| || ||||  ||||| ||  ||||||||||| ||||||  |||  ||||||||||||||| |||||||||    
T  20039610 gaatgagagggatcatgaggccgtgtaggtataggactacatagttgaaggaaggcttataagaattgtttggtactacctatatcaacaagat 20039517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 343 - 435
Target Start/End: Complemental strand, 17445590 - 17445498
Alignment:
Q  343 aatgagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 435  Q
    ||||||||||||| ||||  ||| || | ||| ||||| ||| ||||||||||| ||||||  |||  ||||||||||||||| |||||||||    
T  17445590 aatgagagggatcctgaggccgtgtaggcatgggactacatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagat 17445498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 370 - 435
Target Start/End: Original strand, 1821944 - 1822009
Alignment:
Q  370 gtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 435  Q
    ||||||||||  ||| ||||||||||| ||||||  |||  ||||||||||||||| |||||||||    
T  1821944 gtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagat 1822009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 342 - 435
Target Start/End: Original strand, 2473969 - 2474062
Alignment:
Q  342 gaatgagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 435  Q
    |||||||||||||| | || ||||| | | ||||||||  ||| ||||||||||| ||||||  |||  |||||||| |||||| |||||||||    
T  2473969 gaatgagagggatcctaaggtcgtacaggcatgagactgcatggttgaaggaaggcttataagaattgtttggtactgcctatatcaacaagat 2474062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 342 - 435
Target Start/End: Complemental strand, 3886737 - 3886644
Alignment:
Q  342 gaatgagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 435  Q
    |||||||||||||| |||| ||||| ||||||| ||||  ||| | ||||||| | |||||   |||  ||||||||||||||| |||||||||    
T  3886737 gaatgagagggatcctgaggtcgtacaagtatgggactgcatggtagaaggaatgcttatatgaattgtttggtactacctatatcaacaagat 3886644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 11)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 338 - 435
Target Start/End: Original strand, 42515550 - 42515647
Alignment:
Q  338 atcagaatgagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 435  Q
    |||||||||||||||||| ||||  ||| || ||||||||||| ||| ||||||||||| ||||||  | |  ||||||||||||||| |||||||||    
T  42515550 atcagaatgagagggatcctgaggccgtgtaggtatgagactacatggttgaaggaaggcttataagaagtgtttggtactacctatatcaacaagat 42515647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 342 - 435
Target Start/End: Complemental strand, 6747734 - 6747641
Alignment:
Q  342 gaatgagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 435  Q
    |||||||||||||| ||||  ||| || |||||| |||| ||| ||||||||||| ||||||  |||  ||||||||||||||| |||||||||    
T  6747734 gaatgagagggatcctgaggccgtgtaggtatgatactacatggttgaaggaaggattataagaattgtttggtactacctatatcaacaagat 6747641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 338 - 435
Target Start/End: Original strand, 679823 - 679919
Alignment:
Q  338 atcagaatgagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 435  Q
    |||||||||||||||||| |||| |||| || ||||| || || |||  |||||||||| |||||| || |  ||||||||||||||| |||||||||    
T  679823 atcagaatgagagggatcctgaggtcgtgtaggtatgggagtacatggctgaaggaaggcttataa-gaattgttggtactacctatatcaacaagat 679919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 342 - 435
Target Start/End: Complemental strand, 2611788 - 2611695
Alignment:
Q  342 gaatgagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 435  Q
    ||||||||||| || |||| || | || ||||||||||||||| | ||||||||| ||||||  |||  ||||||||| ||||| |||||||||    
T  2611788 gaatgagaggggtcctgaggtcatgtaggtatgagactatatggtggaaggaaggcttataagaattgtttggtactatctataacaacaagat 2611695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 338 - 435
Target Start/End: Complemental strand, 2941897 - 2941800
Alignment:
Q  338 atcagaatgagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 435  Q
    |||||||||||||||||| ||||  |||| | ||||| ||||  ||| ||||||||||| | ||||  |||  ||||||||||||||| |||||||||    
T  2941897 atcagaatgagagggatcctgaggccgtacaggtatgggactgcatggttgaaggaaggctgataagaattgtttggtactacctatatcaacaagat 2941800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 342 - 435
Target Start/End: Original strand, 42515102 - 42515195
Alignment:
Q  342 gaatgagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 435  Q
    |||||||||||||| ||||  |||  | ||||||||||  ||||||||||||||  ||||||  |||  ||||||||||||||| |||||||||    
T  42515102 gaatgagagggatcctgaggccgtgcaggtatgagactgcatgattgaaggaagacttataagaattgtttggtactacctatatcaacaagat 42515195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 368 - 432
Target Start/End: Complemental strand, 30572724 - 30572661
Alignment:
Q  368 aagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaa 432  Q
    ||||| ||||||||||||||||||||||| | |||| |||| || | ||||||||||||||||||    
T  30572724 aagtacgagactatatgattgaaggaagg-tcataaggattgatcgatactacctataccaacaa 30572661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 342 - 435
Target Start/End: Original strand, 2193266 - 2193359
Alignment:
Q  342 gaatgagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 435  Q
    ||||||||||| || ||||| |||  | ||||| ||||  ||| ||||||||||| ||||||  |||  ||||||||||||||| |||||||||    
T  2193266 gaatgagagggttcctgagaccgtgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagat 2193359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 342 - 435
Target Start/End: Complemental strand, 6719210 - 6719117
Alignment:
Q  342 gaatgagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 435  Q
    |||||||||||||| ||||   || || ||||| ||||| ||| ||||||||| | ||||||  |||  ||||||||||||||| |||||||||    
T  6719210 gaatgagagggatcctgaggctgtgtaggtatgggactacatggttgaaggaatgcttataagaattgtttggtactacctatatcaacaagat 6719117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 342 - 435
Target Start/End: Original strand, 25182371 - 25182464
Alignment:
Q  342 gaatgagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 435  Q
    ||||||||| |||| |||||  ||  ||||||||||||  ||| ||||||||||  ||||||  |||  ||||||||||||||| |||||||||    
T  25182371 gaatgagagagatcctgagactgtgcaagtatgagactgcatggttgaaggaagacttataagaattgtttggtactacctatatcaacaagat 25182464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 342 - 435
Target Start/End: Original strand, 28495864 - 28495957
Alignment:
Q  342 gaatgagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 435  Q
    |||||||||||||| ||||  ||| || ||||| ||||| ||| ||||||||||| ||||||  | |  | ||||||||||||| |||||||||    
T  28495864 gaatgagagggatcttgaggccgtgtaggtatgggactacatggttgaaggaaggcttataagaactgttgggtactacctatatcaacaagat 28495957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 16)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 338 - 435
Target Start/End: Complemental strand, 21220465 - 21220368
Alignment:
Q  338 atcagaatgagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 435  Q
    |||||||||||||||||||||||  | | || |||||| |||||||| ||||||||| | ||||||  |||  ||||||||||||||| |||||||||    
T  21220465 atcagaatgagagggatcatgaggccatgtaggtatgaaactatatggttgaaggaatgcttataagaattgtttggtactacctatatcaacaagat 21220368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 347 - 432
Target Start/End: Complemental strand, 31817523 - 31817438
Alignment:
Q  347 agagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaa 432  Q
    |||||||||||||| ||||  | ||||||||||  ||| ||||||||| ||||||||| |||  ||||||||||||||||||||||    
T  31817523 agagggatcatgaggtcgtgcatgtatgagacttcatggttgaaggaacgtttataataattgtttggtactacctataccaacaa 31817438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 342 - 435
Target Start/End: Complemental strand, 4128019 - 4127926
Alignment:
Q  342 gaatgagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 435  Q
    |||||||||||||| ||||  | | || | ||||||||||||| ||||||||||| ||||||  |||  ||||||||||||||| |||||||||    
T  4128019 gaatgagagggatcctgaggccatgtaggcatgagactatatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagat 4127926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 338 - 435
Target Start/End: Complemental strand, 8467934 - 8467837
Alignment:
Q  338 atcagaatgagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 435  Q
    |||||||||| ||||||| |||||  ||  | ||||||||||| ||| ||||||||||  ||||||  |||  |||||||||||||||||||||||||    
T  8467934 atcagaatgaaagggatcctgagactgtgcaggtatgagactacatggttgaaggaagacttataagaattgtttggtactacctataccaacaagat 8467837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 342 - 431
Target Start/End: Complemental strand, 50399123 - 50399034
Alignment:
Q  342 gaatgagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaaca 431  Q
    |||||||||||||| ||||| ||| || |||||||| || ||| ||||||||||| ||||||  |||  ||||||||||||||| |||||    
T  50399123 gaatgagagggatcctgagaccgtgtaggtatgagattacatggttgaaggaaggcttataagaattgtttggtactacctatatcaaca 50399034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 343 - 435
Target Start/End: Complemental strand, 29628796 - 29628704
Alignment:
Q  343 aatgagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 435  Q
    ||||||||||||| ||||  ||| || ||||||||||| ||| ||||||||||  ||||||  |||  ||||||||||||||| |||||||||    
T  29628796 aatgagagggatcctgaggccgtgtaggtatgagactacatggttgaaggaagacttataagaattgtttggtactacctatatcaacaagat 29628704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 342 - 435
Target Start/End: Original strand, 3169216 - 3169309
Alignment:
Q  342 gaatgagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 435  Q
    |||||||||| ||||||||  ||| || ||||| ||||| ||| ||||||||||  ||||||  |||  ||||||||||||||| |||||||||    
T  3169216 gaatgagaggaatcatgaggccgtgtaggtatgggactacatggttgaaggaagacttataaaaattgtttggtactacctatatcaacaagat 3169309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 342 - 435
Target Start/End: Complemental strand, 9423988 - 9423895
Alignment:
Q  342 gaatgagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 435  Q
    |||||||||||||| |||| ||||  | ||||| ||||  ||| ||||| ||||| ||||||| |||  ||||||||||||||| |||||||||    
T  9423988 gaatgagagggatcctgaggtcgtgcatgtatgggactgcatggttgaaagaaggcttataataattgtttggtactacctatatcaacaagat 9423895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 342 - 435
Target Start/End: Complemental strand, 44471455 - 44471362
Alignment:
Q  342 gaatgagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 435  Q
    ||||||||| |||| ||||  |||| | ||||||||||| ||| ||||||||||  ||||||  |||  ||||||||||||||| |||||||||    
T  44471455 gaatgagagagatcttgaggccgtacaggtatgagactacatggttgaaggaagacttataagaattgtttggtactacctatatcaacaagat 44471362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 342 - 435
Target Start/End: Complemental strand, 50398668 - 50398575
Alignment:
Q  342 gaatgagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 435  Q
    |||||||||||||| ||||  ||| || ||||  ||||| ||| ||||||||||| ||||||  |||  ||||||||||||||| |||||||||    
T  50398668 gaatgagagggatcctgaggccgtgtaggtataggactacatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagat 50398575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 342 - 435
Target Start/End: Complemental strand, 51331411 - 51331318
Alignment:
Q  342 gaatgagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 435  Q
    |||||||||| ||||||||  ||| || ||||| ||||| ||| ||||||||||| ||||||  |||  ||||||||| ||||| |||||||||    
T  51331411 gaatgagaggaatcatgaggccgtgtaggtatgggactacatggttgaaggaaggcttataagaattgtttggtactatctatatcaacaagat 51331318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 371 - 435
Target Start/End: Original strand, 45682242 - 45682306
Alignment:
Q  371 tatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 435  Q
    |||| ||||| ||||||||| ||||||||||||  |||| |||||| || |||||||||||||||    
T  45682242 tatgggactacatgattgaatgaaggtttataagaattatttggtattatctataccaacaagat 45682306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 338 - 435
Target Start/End: Original strand, 1464153 - 1464250
Alignment:
Q  338 atcagaatgagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 435  Q
    ||||||||||||||||||||| || ||| || |||||||| || ||  ||||| |||   ||||||  |||  ||||||||||||||| |||||||||    
T  1464153 atcagaatgagagggatcatgcgaccgtgtaggtatgagaatacatagttgaaagaaaacttataagaattgtttggtactacctatatcaacaagat 1464250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 342 - 435
Target Start/End: Complemental strand, 14572280 - 14572187
Alignment:
Q  342 gaatgagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 435  Q
    |||||||||||||| ||||  | | || ||||| ||||| ||| ||||||| ||| ||||||  |||  ||||||||||||||| |||||||||    
T  14572280 gaatgagagggatcctgaggccatgtaggtatgggactacatggttgaagggaggcttataagaattgtttggtactacctatatcaacaagat 14572187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 342 - 435
Target Start/End: Original strand, 21067292 - 21067385
Alignment:
Q  342 gaatgagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 435  Q
    ||||||||||||||  ||| ||||  | ||||||||||  ||| ||||||||||  | ||||| |||| |||||||||| |||| |||||||||    
T  21067292 gaatgagagggatcccgaggtcgtgcatgtatgagactgcatggttgaaggaagactaataataattatttggtactacatatatcaacaagat 21067385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 342 - 435
Target Start/End: Complemental strand, 44471004 - 44470911
Alignment:
Q  342 gaatgagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 435  Q
    ||||||||| ||||||||    ||| ||||||| |||| |||| ||||| ||||| ||||||  |||  ||||||||||||||| |||||||||    
T  44471004 gaatgagagagatcatgacgctgtacaagtatgtgactgtatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagat 44470911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 13)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 346 - 435
Target Start/End: Complemental strand, 25230380 - 25230291
Alignment:
Q  346 gagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 435  Q
    |||||||||| |||| |||| || ||||| ||||| ||| ||||||||||| ||||||  |||| ||||||||||||||| |||||||||    
T  25230380 gagagggatcctgaggtcgtgtaggtatgggactacatggttgaaggaaggcttataagaattatttggtactacctatatcaacaagat 25230291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 342 - 435
Target Start/End: Complemental strand, 25230841 - 25230748
Alignment:
Q  342 gaatgagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 435  Q
    |||||||||||||| ||||  | | || ||||||||||| ||| ||||||||||||||||||  |||  ||||||||||||||| |||||||||    
T  25230841 gaatgagagggatcctgaggccatgtaggtatgagactacatggttgaaggaaggtttataagaattgtttggtactacctatatcaacaagat 25230748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 346 - 435
Target Start/End: Complemental strand, 25237967 - 25237878
Alignment:
Q  346 gagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 435  Q
    |||||||||| |||| |||| || ||||| ||||| ||| ||||||||||| ||||||  |||| ||||||||||||||| |||||||||    
T  25237967 gagagggatcctgaggtcgtgtaggtatgggactacatggttgaaggaaggcttataagaattatttggtactacctatatcaacaagat 25237878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 342 - 435
Target Start/End: Complemental strand, 25238428 - 25238335
Alignment:
Q  342 gaatgagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 435  Q
    |||||||||||||| ||||  | | || ||||||||||| ||| ||||||||||||||||||  |||  ||||||||||||||| |||||||||    
T  25238428 gaatgagagggatcctgaggccatgtaggtatgagactacatggttgaaggaaggtttataagaattgtttggtactacctatatcaacaagat 25238335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 344 - 435
Target Start/End: Complemental strand, 25239211 - 25239120
Alignment:
Q  344 atgagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 435  Q
    |||||||||||  |||| |||| || ||||| ||||||||| ||||||||| | ||||||  |||  ||||||||||||||| |||||||||    
T  25239211 atgagagggattctgaggtcgtgtaggtatgggactatatggttgaaggaacgcttataagaattttttggtactacctatatcaacaagat 25239120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 342 - 435
Target Start/End: Original strand, 30529697 - 30529790
Alignment:
Q  342 gaatgagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 435  Q
    |||||||||||||| ||||   || || ||||||||||| ||| |||||| |||| ||||||  |||  ||||||||||||||| |||||||||    
T  30529697 gaatgagagggatcctgaggctgtgtaggtatgagactacatggttgaagtaaggcttataagaattttttggtactacctatatcaacaagat 30529790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 342 - 435
Target Start/End: Complemental strand, 31284412 - 31284319
Alignment:
Q  342 gaatgagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 435  Q
    |||||||||||||| |||| ||||  | ||||| ||||  ||| ||||||||||| ||||||  |||  ||||||||||||||| |||||||||    
T  31284412 gaatgagagggatcttgaggtcgtgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagat 31284319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 343 - 435
Target Start/End: Complemental strand, 20885252 - 20885160
Alignment:
Q  343 aatgagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 435  Q
    ||||||||||||| |||| |||| || ||||| ||||| ||| ||||||||||  ||||||  |||  ||| ||||||||||| |||||||||    
T  20885252 aatgagagggatcttgaggtcgtgtaggtatgtgactacatggttgaaggaagacttataagaattgtttgatactacctatatcaacaagat 20885160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 342 - 435
Target Start/End: Complemental strand, 11180170 - 11180077
Alignment:
Q  342 gaatgagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 435  Q
    |||||||||||||| ||||  | | || ||||| ||||| ||| ||||||||||| ||||||  |||  | ||||||||||||| |||||||||    
T  11180170 gaatgagagggatcctgaggccttgtaggtatgggactacatggttgaaggaaggcttataagaattgttgggtactacctatatcaacaagat 11180077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 342 - 435
Target Start/End: Original strand, 14813959 - 14814052
Alignment:
Q  342 gaatgagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 435  Q
    ||||||||||| || ||||  ||| || ||||||||||  ||| || |||||||| ||||||| |||  ||||||||||||||| ||| |||||    
T  14813959 gaatgagagggttcctgaggccgtgtaggtatgagactgcatggttaaaggaaggcttataataattgtttggtactacctatatcaataagat 14814052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 338 - 435
Target Start/End: Original strand, 39640943 - 39641040
Alignment:
Q  338 atcagaatgagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 435  Q
    ||||||||||||| |||| ||||  ||| || ||||||||||| ||| ||||||||||  ||||||   ||  ||||||||||||||| ||| |||||    
T  39640943 atcagaatgagagagatcctgaggccgtgtaggtatgagactacatggttgaaggaagacttataagagttgtttggtactacctatatcaataagat 39641040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 342 - 435
Target Start/End: Original strand, 41472311 - 41472403
Alignment:
Q  342 gaatgagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 435  Q
    |||||||||||||| |||| ||||| | ||||||||||  ||| ||||||||| | ||||||  |||  |||||||||| |||| |||||||||    
T  41472311 gaatgagagggatcctgaggtcgtacaggtatgagactgcatggttgaaggaa-gcttataagaattgtttggtactacatatatcaacaagat 41472403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 342 - 435
Target Start/End: Original strand, 50347756 - 50347849
Alignment:
Q  342 gaatgagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 435  Q
    |||||||||||||| ||||  | | || |||||||||||  || ||||||||||| ||||||  |||  | ||||||||||||| |||||||||    
T  50347756 gaatgagagggatcctgaggccttgtatgtatgagactacttggttgaaggaaggcttataagaattgttgggtactacctatatcaacaagat 50347849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1138 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 1)
Name: scaffold1138
Description:

Target: scaffold1138; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 271 - 435
Target Start/End: Complemental strand, 904 - 740
Alignment:
Q  271 atggcacatgcaatgagctgctcctgacatgcttctaggaaattgacaaatgaatgaaccaatttatatcagaatgagagggatcatgagatcgtataag 370  Q
    ||||||| | |||||||| |||| ||||||||||||||  |    ||| ||| ||||| ||| | | |||||||||||||||  ||| |||||||||| |    
T  904 atggcacgtacaatgagcggctcttgacatgcttctagacacggaacatatggatgaatcaaatcacatcagaatgagagggtgcataagatcgtatagg 805  T
Q  371 tatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 435  Q
    ||||||| |||||| |||||||| |  |||||  ||||||| |||||||| || | |||||||||    
T  804 tatgagattatatggttgaaggaggacttatatggattaatcggtactacatacatcaacaagat 740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 38; Significance: 0.000000000004; HSPs: 7)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 342 - 435
Target Start/End: Complemental strand, 34308615 - 34308522
Alignment:
Q  342 gaatgagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 435  Q
    |||||| ||||||| ||||  |||| |||||||||||| |||| ||||||||||| ||||||  | |  ||||||||||||||| |||||||||    
T  34308615 gaatgaaagggatcctgaggccgtacaagtatgagactgtatggttgaaggaaggcttataagaactgtttggtactacctatatcaacaagat 34308522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 342 - 425
Target Start/End: Complemental strand, 34309075 - 34308992
Alignment:
Q  342 gaatgagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctata 425  Q
    |||||||||||||| ||||  |||| |||||||||||| |||| ||||||||||| ||||||  | |  |||||||||||||||    
T  34309075 gaatgagagggatcctgaggccgtacaagtatgagactgtatggttgaaggaaggcttataagaactgtttggtactacctata 34308992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 338 - 432
Target Start/End: Complemental strand, 27819386 - 27819292
Alignment:
Q  338 atcagaatgagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaa 432  Q
    ||||||||||||||||||||||  || |  ||||||||||||  ||| ||||||||||| | ||||  |||  ||||||||||||||| ||||||    
T  27819386 atcagaatgagagggatcatgaagtcatgcaagtatgagacttcatggttgaaggaaggctaataagaattgtttggtactacctatatcaacaa 27819292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 342 - 435
Target Start/End: Original strand, 2044068 - 2044161
Alignment:
Q  342 gaatgagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 435  Q
    |||||||||||||| ||||   || || ||||||||||| ||| ||||||||||| ||||||  |||  ||| ||||||||||| |||||||||    
T  2044068 gaatgagagggatcctgaggctgtgtaggtatgagactacatggttgaaggaaggcttataagaattgtttgatactacctatatcaacaagat 2044161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 342 - 435
Target Start/End: Complemental strand, 6465046 - 6464953
Alignment:
Q  342 gaatgagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 435  Q
    |||||||||| ||||||||  ||| || |||||  |||| ||| ||||||||||| ||||||  |||  ||||||||||||||| |||||||||    
T  6465046 gaatgagaggaatcatgaggccgtgtaggtatggaactacatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagat 6464953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 342 - 435
Target Start/End: Original strand, 22705182 - 22705275
Alignment:
Q  342 gaatgagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 435  Q
    |||||||||||||| |||   ||| || ||||| ||||  ||||||||||||||| ||||||  |||  ||||||||||||||| |||||||||    
T  22705182 gaatgagagggatcctgaagccgtgtaggtatgggactggatgattgaaggaagggttataagaattgtttggtactacctatatcaacaagat 22705275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 343 - 435
Target Start/End: Complemental strand, 28375189 - 28375097
Alignment:
Q  343 aatgagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 435  Q
    ||||||||||||| ||||  |||  | ||||||||||  ||||||||||||||| ||||||  |||  ||||||||||||| | |||||||||    
T  28375189 aatgagagggatcctgaggccgtgcaggtatgagactgcatgattgaaggaaggcttataagaattgtttggtactacctacatcaacaagat 28375097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 38; Significance: 0.000000000004; HSPs: 5)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 342 - 435
Target Start/End: Complemental strand, 20896824 - 20896731
Alignment:
Q  342 gaatgagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 435  Q
    |||||||||||||| | ||  ||| || ||||||||||| ||| ||||||||||| ||||||  |||  ||||||||||||||| |||||||||    
T  20896824 gaatgagagggatccttaggccgtgtaggtatgagactacatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagat 20896731  T

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Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 342 - 435
Target Start/End: Complemental strand, 31821828 - 31821735
Alignment:
Q  342 gaatgagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 435  Q
    |||||||||||||||||||  | | || ||||||||||| ||| ||||||||| | ||||||  |||| ||||||||| ||||| |||||||||    
T  31821828 gaatgagagggatcatgaggccatgtaggtatgagactacatggttgaaggaatgcttataagaattatttggtactaactatatcaacaagat 31821735  T

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Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 370 - 435
Target Start/End: Original strand, 13492827 - 13492892
Alignment:
Q  370 gtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 435  Q
    ||||||||||  ||| ||||||||||| ||||||| |||  ||||||||||||||| |||||||||    
T  13492827 gtatgagactgcatggttgaaggaaggcttataataattgtttggtactacctatatcaacaagat 13492892  T

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Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 342 - 432
Target Start/End: Complemental strand, 6331048 - 6330958
Alignment:
Q  342 gaatgagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaa 432  Q
    |||||||| ||||| ||||  ||| || ||||||||||| ||| ||||||||||  ||||||  |||  ||||||||||||||| ||||||    
T  6331048 gaatgagatggatcctgaggccgtgtaggtatgagactacatggttgaaggaagacttataagaattgtttggtactacctatatcaacaa 6330958  T

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Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 338 - 435
Target Start/End: Original strand, 20735701 - 20735798
Alignment:
Q  338 atcagaatgagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 435  Q
    |||| ||||||||||||| |||||  || || ||||| ||||| ||||||| ||||||| ||||||  |||  ||| |||||| |||| |||||||||    
T  20735701 atcataatgagagggatcttgagactgtgtaggtatgtgactacatgattgtaggaaggcttataagaattgtttgatactacttatatcaacaagat 20735798  T

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Target: scaffold0047 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 338 - 431
Target Start/End: Complemental strand, 17738 - 17645
Alignment:
Q  338 atcagaatgagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaaca 431  Q
    |||||||||||||||||| ||||  ||| || ||||| ||||| ||| ||||||||| | ||||||  |||  ||||||||||||||| |||||    
T  17738 atcagaatgagagggatcctgaggccgtgtaggtatgggactacatggttgaaggaaagcttataagaattgtttggtactacctatatcaaca 17645  T

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Target: scaffold0168 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 343 - 435
Target Start/End: Original strand, 2753 - 2845
Alignment:
Q  343 aatgagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 435  Q
    ||||||||||||| ||||  ||| || ||||| ||||| ||| ||||||||||| ||||||  |||  | ||||||||||||| |||||||||    
T  2753 aatgagagggatcctgaggccgtgtaggtatgggactacatggttgaaggaaggcttataagaattgttgggtactacctatatcaacaagat 2845  T

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Target: scaffold0499 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0499
Description:

Target: scaffold0499; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 370 - 435
Target Start/End: Complemental strand, 2159 - 2094
Alignment:
Q  370 gtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 435  Q
    ||||||||||  ||| ||||||||||| ||||||  |||  ||||||||||||||| |||||||||    
T  2159 gtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagat 2094  T

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Target: scaffold0040 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 370 - 435
Target Start/End: Complemental strand, 2318 - 2253
Alignment:
Q  370 gtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 435  Q
    ||||| ||||| ||| ||||||||||| ||||||  |||  ||||||||||||||| |||||||||    
T  2318 gtatgggactacatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagat 2253  T

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Target: scaffold0007 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 342 - 435
Target Start/End: Complemental strand, 142410 - 142317
Alignment:
Q  342 gaatgagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 435  Q
    |||||||||||||| ||||  |||  | ||||| ||||  ||| ||||||||| ||||||||  |||  ||||||||||||||| |||||||||    
T  142410 gaatgagagggatcctgaggccgtgcaggtatgggacttcatggttgaaggaatgtttataagaattgtttggtactacctatatcaacaagat 142317  T

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Target: scaffold0005 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 342 - 435
Target Start/End: Original strand, 245096 - 245189
Alignment:
Q  342 gaatgagagggatcatgagatcgtataagtatgagactatatgattgaaggaaggtttataatgattaattggtactacctataccaacaagat 435  Q
    |||||||||||||| ||||  | | || ||||| ||||| ||| ||||||| ||| ||||||  |||  ||||||||||||||| |||||||||    
T  245096 gaatgagagggatcctgaggccatgtaggtatgggactacatggttgaagggaggcttataagaattgtttggtactacctatatcaacaagat 245189  T

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