View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16005_high_10 (Length: 227)
Name: NF16005_high_10
Description: NF16005
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16005_high_10 |
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Alignment Details
Target: chr2 (Bit Score: 137; Significance: 1e-71; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 14 - 213
Target Start/End: Original strand, 40452664 - 40452861
Alignment:
| Q |
14 |
atcataccttgctgttgctgctgatttccatctttttctttttaaacatagttatatgttcttaatttgnnnnnnnnnnnnnnnnnntcagaacaacact |
113 |
Q |
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| T |
40452664 |
atcataccttgctgttgctgctgatttccatctttttctttttaaacatagttatatgttcttaatttgaaaaagaaaaaaaaaa--tcagaacaacact |
40452761 |
T |
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| Q |
114 |
tataaataattaaataattaggcgattggttgattgtaaatgaaaatgaatcataccttgctgcctgagtgagagctgcgcagtgtgttgacttggtatt |
213 |
Q |
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| T |
40452762 |
tataaataattaaataattaggcgattggttgattgtaaatgaaaatgaatcataccttgctgcctgagtgagagctgcgcagtgtgttgactttgtatt |
40452861 |
T |
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