View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16005_high_5 (Length: 325)
Name: NF16005_high_5
Description: NF16005
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16005_high_5 |
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Alignment Details
Target: chr8 (Bit Score: 272; Significance: 1e-152; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 272; E-Value: 1e-152
Query Start/End: Original strand, 18 - 314
Target Start/End: Original strand, 11536312 - 11536610
Alignment:
| Q |
18 |
tgctccattggtat--taattcaaaagacctgaaaaataaaaatgtatatctcagaaaagctgacgccaaatcatcatttcaattcatttgtgtacactg |
115 |
Q |
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| T |
11536312 |
tgctccattggtatattaattcaaaagacctgaaaaataaaaatgtacatctcagaaaagctgatgccaaatcatcatttcaattcatttgtgtacattg |
11536411 |
T |
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| Q |
116 |
tatgtcaaggatctaagccattatgttcccaaactgaaattctaacacgtaatcaacaaactcacgatagatccagctcttaaagtcaaaagaacaagct |
215 |
Q |
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| T |
11536412 |
tatgtcaaggatctaagccattatgttcccaaactgaaattctaacacgtaatcaacaaactcacgatagatccagctcttaaagtcaaaagaacaagct |
11536511 |
T |
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| Q |
216 |
caaggcatgacaaggttcacacatttaacatttttaaggtttgatattctcatcaagacatagcataatcatatgacttggtgtttttattatattcat |
314 |
Q |
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| T |
11536512 |
caaagcatgacaaggttcacacatttaacatttttaaggtttgatattctcatcaagacatagcataatcatatgacttggtgtttttattatattcat |
11536610 |
T |
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