View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16006_high_57 (Length: 255)
Name: NF16006_high_57
Description: NF16006
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16006_high_57 |
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Alignment Details
Target: chr1 (Bit Score: 207; Significance: 1e-113; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 18 - 236
Target Start/End: Complemental strand, 30305133 - 30304915
Alignment:
| Q |
18 |
tactcaaatctatgaatccatagtgaatcgttgatatgaaaaagcatgttgcaaatcaagtccttgatatcatgccgaggaacatgggtagcatggagat |
117 |
Q |
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| T |
30305133 |
tactcaaatctatgaatccatagtgaatctttgatatgaaaaagcatgttgcaaatcaagtccttgatatcatgccgaggaacatgggtagcaaggagat |
30305034 |
T |
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| Q |
118 |
cccaagaacaagggctgtttagaaaaaggtcgcaaacttcacattgagtttctttggtttggacaaaatgaaaacatgatcatataaatgcccaatgaat |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
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| T |
30305033 |
cccaagaacaagggctgtttagaaaaaggtcgcaaacttcacattgagtttctttggtttggacaaaatgaaaacatgatcatataaatgtccaatgaat |
30304934 |
T |
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| Q |
218 |
cgatcctttacaacacaag |
236 |
Q |
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||||||||||||||||||| |
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| T |
30304933 |
cgatcctttacaacacaag |
30304915 |
T |
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