View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16006_high_71 (Length: 244)
Name: NF16006_high_71
Description: NF16006
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16006_high_71 |
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Alignment Details
Target: chr8 (Bit Score: 199; Significance: 1e-108; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 18 - 236
Target Start/End: Complemental strand, 8418013 - 8417795
Alignment:
| Q |
18 |
aatattcgtattcggtctcaagctcaccttagctcactctctcaaggattgtaatgtcaacctactaatgtttttgtgcgaataaaatagcttggttggt |
117 |
Q |
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| T |
8418013 |
aatattcgtattcggtctcaagcttaccttagctcactctctcaaggattgtaatgtcaacctaccaaagtttttgtccgaataaaatagcttggttggt |
8417914 |
T |
|
| Q |
118 |
caaaagagtagtatgtggctggttcctgaagatggatgagttaaatttaatggagatggttttgatacaaattttggaggttgtgcttgtgcaacgtgtg |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8417913 |
caaaagagtagtatgtggctggttcctgaagatggatgagttaaatttaatggagatggttttgatacaaattttggaggttgtgcttgtgcaacgtgtg |
8417814 |
T |
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| Q |
218 |
gtggggttgtgcctttgct |
236 |
Q |
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|||||||||||| |||||| |
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| T |
8417813 |
gtggggttgtgcttttgct |
8417795 |
T |
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