View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16006_high_86 (Length: 213)
Name: NF16006_high_86
Description: NF16006
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16006_high_86 |
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Alignment Details
Target: chr7 (Bit Score: 149; Significance: 7e-79; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 149; E-Value: 7e-79
Query Start/End: Original strand, 24 - 197
Target Start/End: Original strand, 27429096 - 27429277
Alignment:
| Q |
24 |
acatttatgctgaaaagatgatacctcatttcaatgtatcgactcaaataacactttcaaacatttacaacccaaaaag--------agatgctttattt |
115 |
Q |
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| T |
27429096 |
acatttatgctgaaaagatgatacctcatttcaatgtatcgactcaaataacactttcaaacattgacaacccaaaaagttaaatagagatgctttattt |
27429195 |
T |
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| Q |
116 |
tctctctttatatataaaggtaagtaatcattattcatgaggatcaggagtgtgtggccattgtattttgaatgctgtaaat |
197 |
Q |
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| T |
27429196 |
tctctctttatatataaaggtaagtaatcattattcatgaggatcaggagtgtgtggccattgtattttgaatgctgtaaat |
27429277 |
T |
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