View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16006_low_104 (Length: 215)
Name: NF16006_low_104
Description: NF16006
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16006_low_104 |
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Alignment Details
Target: chr8 (Bit Score: 125; Significance: 1e-64; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 125; E-Value: 1e-64
Query Start/End: Original strand, 49 - 202
Target Start/End: Original strand, 28437151 - 28437296
Alignment:
| Q |
49 |
tactcctatcttccctttccataaagaaaaaccatctttttctctttttctctctgaaaattcattcaatggtggcaccaaatcacaaaaacacacaaga |
148 |
Q |
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| T |
28437151 |
tactcctatcttccctttccataaagaaaaaccatctt--------tttctctctgaaaattcattcaatggtggcaccaaatcacaaaaacacacaaga |
28437242 |
T |
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| Q |
149 |
tcatgaaaaccaacaaggttcttcatcagaaaccaagataacagatcaacaaaa |
202 |
Q |
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| T |
28437243 |
tcatgaaaaccaacaaggttcttcatcagaaaccaagataacagatcaacaaaa |
28437296 |
T |
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