View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16006_low_74 (Length: 253)
Name: NF16006_low_74
Description: NF16006
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16006_low_74 |
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Alignment Details
Target: chr5 (Bit Score: 231; Significance: 1e-127; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 26210181 - 26210419
Alignment:
| Q |
1 |
tcatcatccgtattatggttttgttcaacccttttaagggttgaactagcaccagaggatgatgatgtcgagcttcttgcagtagcatctgaactacgct |
100 |
Q |
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| T |
26210181 |
tcatcatctgtattatggttttgttcaacccttttaagggttgaactagcaccagaggatgatgatgtcgagcttcttgcagtagcatctgaactacgct |
26210280 |
T |
|
| Q |
101 |
tccgattttcattggagattttttgtggaacctttggttctttatttggaaacaactttgcttcatttttgacatgatcaatgttgttacccttcattgg |
200 |
Q |
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|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26210281 |
tccgattttcattggaaattttttgtggaacctttggttctttatttggaaacaactttgcttcatttttgacatgatcaatgttgttacccttcattgg |
26210380 |
T |
|
| Q |
201 |
tagggaatgaactaatgagtttcttagcctaggactttt |
239 |
Q |
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||||||||||||||||||||||||||||||||||||||| |
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| T |
26210381 |
tagggaatgaactaatgagtttcttagcctaggactttt |
26210419 |
T |
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