View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16006_low_81 (Length: 249)

Name: NF16006_low_81
Description: NF16006
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16006_low_81
NF16006_low_81
[»] chr5 (11 HSPs)
chr5 (25-239)||(36580121-36580334)
chr5 (59-120)||(6702386-6702447)
chr5 (64-127)||(19402005-19402068)
chr5 (62-111)||(17644604-17644653)
chr5 (64-127)||(1145150-1145213)
chr5 (7-57)||(17644530-17644580)
chr5 (7-49)||(1145806-1145848)
chr5 (7-53)||(7164279-7164325)
chr5 (27-85)||(17344802-17344860)
chr5 (7-53)||(40266537-40266583)
chr5 (59-111)||(30491796-30491848)
[»] chr7 (9 HSPs)
chr7 (64-127)||(38790893-38790957)
chr7 (7-57)||(149052-149102)
chr7 (59-127)||(44552703-44552771)
chr7 (81-124)||(26502454-26502497)
chr7 (81-124)||(26590217-26590260)
chr7 (64-119)||(26604179-26604234)
chr7 (73-119)||(38792063-38792109)
chr7 (51-127)||(1537239-1537315)
chr7 (7-59)||(15819786-15819838)
[»] chr3 (17 HSPs)
chr3 (64-140)||(6162688-6162764)
chr3 (7-119)||(11342907-11343019)
chr3 (59-127)||(19866742-19866810)
chr3 (64-127)||(53827667-53827730)
chr3 (58-136)||(7666962-7667040)
chr3 (59-121)||(34086841-34086903)
chr3 (64-113)||(30533884-30533933)
chr3 (90-130)||(3860252-3860292)
chr3 (59-127)||(15042007-15042075)
chr3 (64-108)||(39688758-39688802)
chr3 (64-112)||(42947399-42947447)
chr3 (64-112)||(50663899-50663947)
chr3 (72-127)||(4969884-4969939)
chr3 (52-127)||(53814555-53814630)
chr3 (64-127)||(11343803-11343867)
chr3 (64-108)||(47064892-47064936)
chr3 (64-108)||(54528962-54529006)
[»] chr2 (7 HSPs)
chr2 (64-127)||(12967279-12967343)
chr2 (64-125)||(37893014-37893075)
chr2 (64-113)||(11712981-11713030)
chr2 (64-127)||(12969270-12969332)
chr2 (72-127)||(20685015-20685070)
chr2 (32-87)||(28360074-28360129)
chr2 (59-127)||(25678281-25678349)
[»] chr4 (12 HSPs)
chr4 (64-127)||(33164511-33164574)
chr4 (64-127)||(36172174-36172237)
chr4 (64-119)||(36174585-36174640)
chr4 (64-127)||(55523734-55523797)
chr4 (58-127)||(12572819-12572888)
chr4 (7-124)||(38676951-38677068)
chr4 (64-127)||(28798151-28798214)
chr4 (64-107)||(36217899-36217942)
chr4 (64-127)||(40450940-40451003)
chr4 (64-119)||(53265809-53265864)
chr4 (51-120)||(33161646-33161715)
chr4 (59-127)||(24972399-24972467)
[»] chr1 (11 HSPs)
chr1 (64-127)||(3792569-3792632)
chr1 (64-136)||(45691054-45691126)
chr1 (64-136)||(45691196-45691268)
chr1 (64-136)||(45691338-45691410)
chr1 (64-127)||(11821169-11821232)
chr1 (64-127)||(45688317-45688380)
chr1 (27-87)||(10884458-10884518)
chr1 (59-127)||(33403127-33403195)
chr1 (51-127)||(39650205-39650281)
chr1 (27-88)||(42883723-42883784)
chr1 (9-57)||(5603112-5603160)
[»] chr8 (5 HSPs)
chr8 (76-127)||(9448715-9448766)
chr8 (64-127)||(23558989-23559052)
chr8 (64-127)||(33220793-33220856)
chr8 (7-59)||(17875313-17875365)
chr8 (35-87)||(1349196-1349248)
[»] chr6 (4 HSPs)
chr6 (59-138)||(17436034-17436113)
chr6 (7-57)||(807132-807182)
chr6 (51-127)||(14153363-14153439)
chr6 (64-120)||(806561-806617)
[»] scaffold1763 (1 HSPs)
scaffold1763 (64-120)||(370-426)
[»] scaffold0041 (1 HSPs)
scaffold0041 (59-119)||(24366-24426)


Alignment Details
Target: chr5 (Bit Score: 113; Significance: 2e-57; HSPs: 11)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 25 - 239
Target Start/End: Complemental strand, 36580334 - 36580121
Alignment:
Q  25 aacgtgggttaactcatgcaaatttaacactagtgcaaattaacatgcgtaggggtattttggatttttactttgagaatgagcgaaactatttggataa 124  Q
    |||||| ||||||||||||||||||||||||||||||| |||||||| |||||| ||||||| | ||||| |||   ||| |||| ||| ||||   |||    
T  36580334 aacgtgagttaactcatgcaaatttaacactagtgcaagttaacatgtgtagggatattttgaacttttattttagaaataagcggaaccatttaagtaa 36580235  T
Q  125 tgaacaagattcatagatttacgtgtcaaaagcaaacttacgttgagtttgattatgctttgaagattttccnnnnnnncttattgggcttgggttatat 224  Q
    ||| ||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||    
T  36580234 tgagcagaattcatagatttacgtgtcaaaagcaaacttacgttgagtttgattatgctttgaagattttcc-ttttttcttattgggcttgggttatat 36580136  T
Q  225 ccacccttgtctgtg 239  Q
    |||||||||||||||    
T  36580135 ccacccttgtctgtg 36580121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 59 - 120
Target Start/End: Complemental strand, 6702447 - 6702386
Alignment:
Q  59 gcaaattaacatgcgtaggggtattttggatttttactttgagaatgagcgaaactatttgg 120  Q
    |||| |||||||||||| ||| ||||| || |||||||||||||||||||||||||||||||    
T  6702447 gcaagttaacatgcgtatgggcatttttgacttttactttgagaatgagcgaaactatttgg 6702386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 64 - 127
Target Start/End: Original strand, 19402005 - 19402068
Alignment:
Q  64 ttaacatgcgtaggggtattttggatttttactttgagaatgagcgaaactatttggataatga 127  Q
    |||||||||||| ||| |||||||| |||||||||||||||||| ||||| |||||| ||||||    
T  19402005 ttaacatgcgtatgggcattttggacttttactttgagaatgagtgaaaccatttgggtaatga 19402068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 62 - 111
Target Start/End: Original strand, 17644604 - 17644653
Alignment:
Q  62 aattaacatgcgtaggggtattttggatttttactttgagaatgagcgaa 111  Q
    |||||||||||||||||||||||||||  ||||||||| |||||||||||    
T  17644604 aattaacatgcgtaggggtattttggacatttactttgggaatgagcgaa 17644653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 64 - 127
Target Start/End: Complemental strand, 1145213 - 1145150
Alignment:
Q  64 ttaacatgcgtaggggtattttggatttttactttgagaatgagcgaaactatttggataatga 127  Q
    ||||||||||||| || |||||||   ||||||||| |||||||||||||| ||||||||||||    
T  1145213 ttaacatgcgtagaggcattttggtcatttactttgggaatgagcgaaactgtttggataatga 1145150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 7 - 57
Target Start/End: Original strand, 17644530 - 17644580
Alignment:
Q  7 gcgtgacttaagtcacgcaacgtgggttaactcatgcaaatttaacactag 57  Q
    |||||| |||||||||||| |||| ||||||||||| ||||||||||||||    
T  17644530 gcgtgatttaagtcacgcagcgtgagttaactcatgtaaatttaacactag 17644580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 49
Target Start/End: Original strand, 1145806 - 1145848
Alignment:
Q  7 gcgtgacttaagtcacgcaacgtgggttaactcatgcaaattt 49  Q
    |||||||||||| |||||| |||| ||||||||||||||||||    
T  1145806 gcgtgacttaagacacgcagcgtgagttaactcatgcaaattt 1145848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 53
Target Start/End: Complemental strand, 7164325 - 7164279
Alignment:
Q  7 gcgtgacttaagtcacgcaacgtgggttaactcatgcaaatttaaca 53  Q
    ||||||||||||||||||  ||||  |||||||||||||||||||||    
T  7164325 gcgtgacttaagtcacgcggcgtgaattaactcatgcaaatttaaca 7164279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 85
Target Start/End: Original strand, 17344802 - 17344860
Alignment:
Q  27 cgtgggttaactcatgcaaatttaacactagtgcaaattaacatgcgtaggggtatttt 85  Q
    |||| ||||||||| ||||| |||||||||| |  | ||||||||||||||||||||||    
T  17344802 cgtgagttaactcacgcaaaattaacactagcgtgagttaacatgcgtaggggtatttt 17344860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 53
Target Start/End: Original strand, 40266537 - 40266583
Alignment:
Q  7 gcgtgacttaagtcacgcaacgtgggttaactcatgcaaatttaaca 53  Q
    ||||||||||||||||| | |||| ||||||||| ||||||||||||    
T  40266537 gcgtgacttaagtcacgtagcgtgagttaactcacgcaaatttaaca 40266583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 111
Target Start/End: Original strand, 30491796 - 30491848
Alignment:
Q  59 gcaaattaacatgcgtaggggtattttggatttttactttgagaatgagcgaa 111  Q
    |||| |||||||||||||||  ||||| || |||||||||| |||||||||||    
T  30491796 gcaagttaacatgcgtagggacattttcgacttttactttgggaatgagcgaa 30491848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 45; Significance: 9e-17; HSPs: 9)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 64 - 127
Target Start/End: Complemental strand, 38790957 - 38790893
Alignment:
Q  64 ttaacatgcgtaggggtattttggatttttacttt-gagaatgagcgaaactatttggataatga 127  Q
    ||||||||||||||||||||||||| ||||||||| || |||||||||||| |||||||||||||    
T  38790957 ttaacatgcgtaggggtattttggacttttactttggaaaatgagcgaaaccatttggataatga 38790893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 7 - 57
Target Start/End: Complemental strand, 149102 - 149052
Alignment:
Q  7 gcgtgacttaagtcacgcaacgtgggttaactcatgcaaatttaacactag 57  Q
    ||||||||||||||| ||||||||  |||||||| ||||||||||||||||    
T  149102 gcgtgacttaagtcatgcaacgtgacttaactcacgcaaatttaacactag 149052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 59 - 127
Target Start/End: Original strand, 44552703 - 44552771
Alignment:
Q  59 gcaaattaacatgcgtaggggtattttggatttttactttgagaatgagcgaaactatttggataatga 127  Q
    |||| |||||||||||||| | ||||| || ||||||||||||||||||||| | | ||||| ||||||    
T  44552703 gcaagttaacatgcgtaggagcattttcgacttttactttgagaatgagcgatattgtttgggtaatga 44552771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 81 - 124
Target Start/End: Original strand, 26502454 - 26502497
Alignment:
Q  81 attttggatttttactttgagaatgagcgaaactatttggataa 124  Q
    |||||||| |||||||||||||||||||||||| |||| |||||    
T  26502454 attttggacttttactttgagaatgagcgaaaccatttagataa 26502497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 81 - 124
Target Start/End: Complemental strand, 26590260 - 26590217
Alignment:
Q  81 attttggatttttactttgagaatgagcgaaactatttggataa 124  Q
    |||||||| |||||||||||||||||||||||| |||| |||||    
T  26590260 attttggacttttactttgagaatgagcgaaaccatttagataa 26590217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 64 - 119
Target Start/End: Original strand, 26604179 - 26604234
Alignment:
Q  64 ttaacatgcgtaggggtattttggatttttactttgagaatgagcgaaactatttg 119  Q
    |||||||||||||||| |||||  | |||||||||||||||||||| ||| |||||    
T  26604179 ttaacatgcgtaggggcattttaaacttttactttgagaatgagcggaaccatttg 26604234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 73 - 119
Target Start/End: Original strand, 38792063 - 38792109
Alignment:
Q  73 gtaggggtattttggatttttactttgagaatgagcgaaactatttg 119  Q
    ||||||||||||| || |||||||||||||||||| ||||| |||||    
T  38792063 gtaggggtattttagacttttactttgagaatgagtgaaaccatttg 38792109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 127
Target Start/End: Original strand, 1537239 - 1537315
Alignment:
Q  51 acactagtgcaaattaacatgcgtaggggtattttggatttttactttgagaatgagcgaaactatttggataatga 127  Q
    ||||||| |||  |||||||||| ||||| |||||| |  |||||||||||||||| ||| ||| ||||| ||||||    
T  1537239 acactagcgcatgttaacatgcgcaggggcattttgaacatttactttgagaatgaacgatactgtttgggtaatga 1537315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 59
Target Start/End: Complemental strand, 15819838 - 15819786
Alignment:
Q  7 gcgtgacttaagtcacgcaacgtgggttaactcatgcaaatttaacactagtg 59  Q
    ||||||||||| ||||||| |||| |||||||||  |||| ||||||||||||    
T  15819838 gcgtgacttaactcacgcagcgtgtgttaactcagacaaaattaacactagtg 15819786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 17)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 64 - 140
Target Start/End: Original strand, 6162688 - 6162764
Alignment:
Q  64 ttaacatgcgtaggggtattttggatttttactttgagaatgagcgaaactatttggataatgaacaagattcatag 140  Q
    |||||||||||||||| |||||||| |||||||||| ||||||||| ||| |||||| |||||| ||  ||||||||    
T  6162688 ttaacatgcgtaggggcattttggacttttactttgggaatgagcggaaccatttgggtaatgagcagaattcatag 6162764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 7 - 119
Target Start/End: Complemental strand, 11343019 - 11342907
Alignment:
Q  7 gcgtgacttaagtcacgcaacgtgggttaactcatgcaaatttaacactagtgcaaattaacatgcgtaggggtattttggatttttactttgagaatga 106  Q
    ||||||||||| ||||||  | || ||||| ||  ||||| ||| |||||| | |||||||||||||||||||  ||||||| |||||||||| ||||||    
T  11343019 gcgtgacttaactcacgctgcatgagttaaatcgcgcaaaattagcactagcgtaaattaacatgcgtaggggctttttggacttttactttgggaatga 11342920  T
Q  107 gcgaaactatttg 119  Q
     || ||| |||||    
T  11342919 acggaaccatttg 11342907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 59 - 127
Target Start/End: Complemental strand, 19866810 - 19866742
Alignment:
Q  59 gcaaattaacatgcgtaggggtattttggatttttactttgagaatgagcgaaactatttggataatga 127  Q
    |||| |||||||||||||||| ||||| || |||||||||| |||||||||| ||| ||||| ||||||    
T  19866810 gcaagttaacatgcgtaggggcatttttgacttttactttgggaatgagcgatactgtttgggtaatga 19866742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 64 - 127
Target Start/End: Original strand, 53827667 - 53827730
Alignment:
Q  64 ttaacatgcgtaggggtattttggatttttactttgagaatgagcgaaactatttggataatga 127  Q
    |||||||||||||||| ||||||||  ||||||||| |||||||||| ||||||| | ||||||    
T  53827667 ttaacatgcgtaggggcattttggacatttactttgggaatgagcgatactatttaggtaatga 53827730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 58 - 136
Target Start/End: Original strand, 7666962 - 7667040
Alignment:
Q  58 tgcaaattaacatgcgtaggggtattttggatttttactttgagaatgagcgaaactatttggataatgaacaagattc 136  Q
    ||||| |||||||||||||||| ||||| || ||||| |||| |||||||||| ||| ||||| |||||| ||| ||||    
T  7666962 tgcaagttaacatgcgtaggggcatttttgacttttattttgggaatgagcgatactgtttgggtaatgagcaaaattc 7667040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 59 - 121
Target Start/End: Original strand, 34086841 - 34086903
Alignment:
Q  59 gcaaattaacatgcgtaggggtattttggatttttactttgagaatgagcgaaactatttgga 121  Q
    |||| |||||||||||||||| ||||| || |||||||||| |||||||||| ||| ||||||    
T  34086841 gcaagttaacatgcgtaggggcattttcgacttttactttgggaatgagcgatactgtttgga 34086903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 64 - 113
Target Start/End: Original strand, 30533884 - 30533933
Alignment:
Q  64 ttaacatgcgtaggggtattttggatttttactttgagaatgagcgaaac 113  Q
    |||||||| ||||||||||||||||| |||||||||| ||||||| ||||    
T  30533884 ttaacatgtgtaggggtattttggatatttactttgaaaatgagcaaaac 30533933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 90 - 130
Target Start/End: Complemental strand, 3860292 - 3860252
Alignment:
Q  90 ttttactttgagaatgagcgaaactatttggataatgaaca 130  Q
    ||||| |||||||||||||||||| ||||||||||||||||    
T  3860292 ttttattttgagaatgagcgaaaccatttggataatgaaca 3860252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 59 - 127
Target Start/End: Original strand, 15042007 - 15042075
Alignment:
Q  59 gcaaattaacatgcgtaggggtattttggatttttactttgagaatgagcgaaactatttggataatga 127  Q
    |||| |||||||||||||||| ||||| || |||||||||| |||||||||| | | ||||| ||||||    
T  15042007 gcaagttaacatgcgtaggggcattttcgacttttactttgggaatgagcgatattgtttgggtaatga 15042075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 108
Target Start/End: Original strand, 39688758 - 39688802
Alignment:
Q  64 ttaacatgcgtaggggtattttggatttttactttgagaatgagc 108  Q
    |||||||| ||||||||||||| || |||||||||||||||||||    
T  39688758 ttaacatgtgtaggggtattttcgacttttactttgagaatgagc 39688802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 112
Target Start/End: Complemental strand, 42947447 - 42947399
Alignment:
Q  64 ttaacatgcgtaggggtattttggatttttactttgagaatgagcgaaa 112  Q
    |||||||||||||| | |||||||| |||||||||||||||||| ||||    
T  42947447 ttaacatgcgtaggagcattttggacttttactttgagaatgagtgaaa 42947399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 112
Target Start/End: Complemental strand, 50663947 - 50663899
Alignment:
Q  64 ttaacatgcgtaggggtattttggatttttactttgagaatgagcgaaa 112  Q
    |||||||||||||||| ||||||| | ||||||||| ||||||||||||    
T  50663947 ttaacatgcgtaggggcattttggttatttactttgggaatgagcgaaa 50663899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 72 - 127
Target Start/End: Complemental strand, 4969939 - 4969884
Alignment:
Q  72 cgtaggggtattttggatttttactttgagaatgagcgaaactatttggataatga 127  Q
    |||||||||||||| || |||||||||| ||||||||| ||| |||||| ||||||    
T  4969939 cgtaggggtattttcgacttttactttgggaatgagcggaaccatttgggtaatga 4969884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 127
Target Start/End: Original strand, 53814555 - 53814630
Alignment:
Q  52 cactagtgcaaattaacatgcgtaggggtattttggatttttactttgagaatgagcgaaactatttggataatga 127  Q
    |||||| ||| ||||||||||||||||| ||||||    ||||||||| ||||||||||| | |||||| ||||||    
T  53814555 cactagcgcatattaacatgcgtaggggcattttgatcatttactttgggaatgagcgaatccatttgggtaatga 53814630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 127
Target Start/End: Original strand, 11343803 - 11343867
Alignment:
Q  64 ttaacatgcgta-ggggtattttggatttttactttgagaatgagcgaaactatttggataatga 127  Q
    |||||||||||| |||| ||||| || ||||||||||||| |||||| ||| ||||| |||||||    
T  11343803 ttaacatgcgtatggggcatttttgacttttactttgagagtgagcggaaccatttgaataatga 11343867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 108
Target Start/End: Complemental strand, 47064936 - 47064892
Alignment:
Q  64 ttaacatgcgtaggggtattttggatttttactttgagaatgagc 108  Q
    |||||||||||||| | |||||||| |||||||||| ||||||||    
T  47064936 ttaacatgcgtaggagcattttggacttttactttgggaatgagc 47064892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 108
Target Start/End: Original strand, 54528962 - 54529006
Alignment:
Q  64 ttaacatgcgtaggggtattttggatttttactttgagaatgagc 108  Q
    |||||||| ||||||||||||||||  ||||| ||||||||||||    
T  54528962 ttaacatgtgtaggggtattttggacatttacattgagaatgagc 54529006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 7)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 64 - 127
Target Start/End: Complemental strand, 12967343 - 12967279
Alignment:
Q  64 ttaacatgcgtaggggtattttgga-tttttactttgagaatgagcgaaactatttggataatga 127  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||| ||| |||| | ||||||    
T  12967343 ttaacatgcgtaggggtattttggactttttactttgagaatgagcggaaccatttaggtaatga 12967279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 64 - 125
Target Start/End: Original strand, 37893014 - 37893075
Alignment:
Q  64 ttaacatgcgtaggggtattttggatttttactttgagaatgagcgaaactatttggataat 125  Q
    ||||||||| |||||| |||||||| |||||||||| ||||||||||||| |||||| ||||    
T  37893014 ttaacatgcataggggcattttggacttttactttgggaatgagcgaaaccatttgggtaat 37893075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 64 - 113
Target Start/End: Complemental strand, 11713030 - 11712981
Alignment:
Q  64 ttaacatgcgtaggggtattttggatttttactttgagaatgagcgaaac 113  Q
    ||||||| |||||||| |||||||| |||||||||| |||||||||||||    
T  11713030 ttaacatacgtaggggcattttggacttttactttgggaatgagcgaaac 11712981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 64 - 127
Target Start/End: Original strand, 12969270 - 12969332
Alignment:
Q  64 ttaacatgcgtaggggtattttggatttttactttgagaatgagcgaaactatttggataatga 127  Q
    |||||||||||||||| |||||| | |||||||||| ||||||||| ||| |||| ||||||||    
T  12969270 ttaacatgcgtaggggcattttgaacttttactttg-gaatgagcggaaccatttagataatga 12969332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 72 - 127
Target Start/End: Complemental strand, 20685070 - 20685015
Alignment:
Q  72 cgtaggggtattttggatttttactttgagaatgagcgaaactatttggataatga 127  Q
    |||| ||||||||| || |||||||||||||||||||| ||| |||||| ||||||    
T  20685070 cgtaagggtattttagacttttactttgagaatgagcggaaccatttgggtaatga 20685015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 32 - 87
Target Start/End: Complemental strand, 28360129 - 28360074
Alignment:
Q  32 gttaactcatgcaaatttaacactagtgcaaattaacatgcgtaggggtattttgg 87  Q
    ||||||||| |||||||||||||||| |  | ||||||||||||| ||||||||||    
T  28360129 gttaactcacgcaaatttaacactagcgtgagttaacatgcgtagaggtattttgg 28360074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 127
Target Start/End: Complemental strand, 25678349 - 25678281
Alignment:
Q  59 gcaaattaacatgcgtaggggtattttggatttttactttgagaatgagcgaaactatttggataatga 127  Q
    |||| ||||||||  |||| | ||||| || ||||||||||| ||||||||| ||| ||||||||||||    
T  25678349 gcaagttaacatgtttaggagcatttttgacttttactttgaaaatgagcgatactgtttggataatga 25678281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 12)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 64 - 127
Target Start/End: Original strand, 33164511 - 33164574
Alignment:
Q  64 ttaacatgcgtaggggtattttggatttttactttgagaatgagcgaaactatttggataatga 127  Q
    |||||||||||||||| ||||||||  ||||||||||||||||||| ||| |||||| ||||||    
T  33164511 ttaacatgcgtaggggcattttggacatttactttgagaatgagcggaaccatttgggtaatga 33164574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 64 - 127
Target Start/End: Complemental strand, 36172237 - 36172174
Alignment:
Q  64 ttaacatgcgtaggggtattttggatttttactttgagaatgagcgaaactatttggataatga 127  Q
    ||||||| | ||||||||||||||| |||||||||| ||||||| | |||||||||| ||||||    
T  36172237 ttaacatacataggggtattttggacttttactttgggaatgagtggaactatttgggtaatga 36172174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 64 - 119
Target Start/End: Original strand, 36174585 - 36174640
Alignment:
Q  64 ttaacatgcgtaggggtattttggatttttactttgagaatgagcgaaactatttg 119  Q
    ||||||||||||| || ||||||||||||||||||| ||||||| ||||| |||||    
T  36174585 ttaacatgcgtagtggcattttggatttttactttgggaatgagtgaaaccatttg 36174640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 64 - 127
Target Start/End: Complemental strand, 55523797 - 55523734
Alignment:
Q  64 ttaacatgcgtaggggtattttggatttttactttgagaatgagcgaaactatttggataatga 127  Q
    |||||||||||||||| ||||| || ||||||||||| ||||||||| | | ||||||||||||    
T  55523797 ttaacatgcgtaggggcattttcgacttttactttgaaaatgagcgataatgtttggataatga 55523734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 58 - 127
Target Start/End: Original strand, 12572819 - 12572888
Alignment:
Q  58 tgcaaattaacatgcgtaggggtattttggatttttactttgagaatgagcgaaactatttggataatga 127  Q
    |||| ||||||||||| ||||| ||||||||  |||||||||||||||| ||| ||| ||||||| ||||    
T  12572819 tgcatattaacatgcgcaggggcattttggacatttactttgagaatgaacgatactgtttggatgatga 12572888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 124
Target Start/End: Complemental strand, 38677068 - 38676951
Alignment:
Q  7 gcgtgacttaagtcacgcaacgtgggttaactcatgcaaatttaacactagtgcaaattaacatgcgtaggggtattttggatttttactttgagaatga 106  Q
    ||||| ||||| ||||||  |||| ||||| || |||||| ||||||| |  | || ||||||||||||| |||||||||||  |||| |||| ||||||    
T  38677068 gcgtgccttaactcacgctgcgtgagttaagtcgtgcaaaattaacaccaacgtaagttaacatgcgtagaggtattttggacatttattttgggaatga 38676969  T
Q  107 gcgaaactatttggataa 124  Q
    || ||||  |||||||||    
T  38676968 gcaaaaccgtttggataa 38676951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 64 - 127
Target Start/End: Original strand, 28798151 - 28798214
Alignment:
Q  64 ttaacatgcgtaggggtattttggatttttactttgagaatgagcgaaactatttggataatga 127  Q
    |||||||| | ||||| ||||||||  |||||||||||||||||||| ||| ||||| ||||||    
T  28798151 ttaacatgtgcaggggcattttggacatttactttgagaatgagcgatactgtttgggtaatga 28798214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 64 - 107
Target Start/End: Complemental strand, 36217942 - 36217899
Alignment:
Q  64 ttaacatgcgtaggggtattttggatttttactttgagaatgag 107  Q
    |||||||||||||||| |||||||| |||||||||| |||||||    
T  36217942 ttaacatgcgtaggggcattttggacttttactttgggaatgag 36217899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 64 - 127
Target Start/End: Complemental strand, 40451003 - 40450940
Alignment:
Q  64 ttaacatgcgtaggggtattttggatttttactttgagaatgagcgaaactatttggataatga 127  Q
    |||||||||||||||| ||||| || |||||||||| |||||||||| ||| ||| | ||||||    
T  40451003 ttaacatgcgtaggggcattttcgacttttactttgggaatgagcgatactgtttaggtaatga 40450940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 64 - 119
Target Start/End: Complemental strand, 53265864 - 53265809
Alignment:
Q  64 ttaacatgcgtaggggtattttggatttttactttgagaatgagcgaaactatttg 119  Q
    |||||||||||||| | |||||||| |||||||||  ||||||||||||| |||||    
T  53265864 ttaacatgcgtaggagcattttggaattttactttaggaatgagcgaaaccatttg 53265809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 120
Target Start/End: Complemental strand, 33161715 - 33161646
Alignment:
Q  51 acactagtgcaaattaacatgcgtaggggtattttggatttttactttgagaatgagcgaaactatttgg 120  Q
    |||||||||||  |||||||  | ||||||||||||||| ||||||||| |||||| ||| ||| |||||    
T  33161715 acactagtgcatgttaacatatgcaggggtattttggatatttactttgggaatgaacgatactctttgg 33161646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 127
Target Start/End: Complemental strand, 24972467 - 24972399
Alignment:
Q  59 gcaaattaacatgcgtaggggtattttggatttttactttgagaatgagcgaaactatttggataatga 127  Q
    |||| ||||||||||||||||| |||| || |||||||||  |||||||||| ||| ||| | ||||||    
T  24972467 gcaagttaacatgcgtaggggtgtttttgacttttactttaggaatgagcgatactgtttaggtaatga 24972399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 11)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 64 - 127
Target Start/End: Complemental strand, 3792632 - 3792569
Alignment:
Q  64 ttaacatgcgtaggggtattttggatttttactttgagaatgagcgaaactatttggataatga 127  Q
    |||||||||||| ||| |||||||| ||||||||||  ||||||||||||||||||| ||||||    
T  3792632 ttaacatgcgtaagggcattttggacttttactttggaaatgagcgaaactatttgggtaatga 3792569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 64 - 136
Target Start/End: Original strand, 45691054 - 45691126
Alignment:
Q  64 ttaacatgcgtaggggtattttggatttttactttgagaatgagcgaaactatttggataatgaacaagattc 136  Q
    |||||||| ||||||| |||||||| |||||||||| ||||||||||||| |||||  |||||| ||| ||||    
T  45691054 ttaacatgtgtaggggcattttggacttttactttgggaatgagcgaaaccatttgagtaatgagcaaaattc 45691126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 64 - 136
Target Start/End: Original strand, 45691196 - 45691268
Alignment:
Q  64 ttaacatgcgtaggggtattttggatttttactttgagaatgagcgaaactatttggataatgaacaagattc 136  Q
    |||||||| ||||||| |||||||| |||||||||| ||||||||||||| |||||  |||||| ||| ||||    
T  45691196 ttaacatgtgtaggggcattttggacttttactttgggaatgagcgaaaccatttgagtaatgagcaaaattc 45691268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 64 - 136
Target Start/End: Original strand, 45691338 - 45691410
Alignment:
Q  64 ttaacatgcgtaggggtattttggatttttactttgagaatgagcgaaactatttggataatgaacaagattc 136  Q
    |||||||| ||||||| |||||||| |||||||||| ||||||||||||| |||||  |||||| ||| ||||    
T  45691338 ttaacatgtgtaggggcattttggacttttactttgggaatgagcgaaaccatttgagtaatgagcaaaattc 45691410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 64 - 127
Target Start/End: Complemental strand, 11821232 - 11821169
Alignment:
Q  64 ttaacatgcgtaggggtattttggatttttactttgagaatgagcgaaactatttggataatga 127  Q
    ||||||||| |||| | |||||||| |||||||||| |||||| |||||| |||||||||||||    
T  11821232 ttaacatgcataggagcattttggacttttactttgggaatgaacgaaaccatttggataatga 11821169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 64 - 127
Target Start/End: Complemental strand, 45688380 - 45688317
Alignment:
Q  64 ttaacatgcgtaggggtattttggatttttactttgagaatgagcgaaactatttggataatga 127  Q
    |||||||||||||||| |||||| | |||||||||| ||||||||  ||| |||||||||||||    
T  45688380 ttaacatgcgtaggggcattttgaacttttactttgggaatgagcagaaccatttggataatga 45688317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 87
Target Start/End: Original strand, 10884458 - 10884518
Alignment:
Q  27 cgtgggttaactcatgcaaatttaacactagtgcaaattaacatgcgtaggggtattttgg 87  Q
    |||| ||||||||| |||||||||||||||| |  | |||||||| |||||||||||||||    
T  10884458 cgtgagttaactcacgcaaatttaacactagcgtgagttaacatgtgtaggggtattttgg 10884518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 59 - 127
Target Start/End: Original strand, 33403127 - 33403195
Alignment:
Q  59 gcaaattaacatgcgtaggggtattttggatttttactttgagaatgagcgaaactatttggataatga 127  Q
    |||| |||||||||||||||| ||||| || ||||||||||  ||||||||| ||| ||||| ||||||    
T  33403127 gcaagttaacatgcgtaggggcattttcgacttttactttggaaatgagcgatactgtttgggtaatga 33403195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 127
Target Start/End: Complemental strand, 39650281 - 39650205
Alignment:
Q  51 acactagtgcaaattaacatgcgtaggggtattttggatttttactttgagaatgagcgaaactatttggataatga 127  Q
    ||||||| |||  |||||||||||||||| ||||||||  ||||||||  ||||||||||||| |||| | ||||||    
T  39650281 acactagcgcatgttaacatgcgtaggggcattttggacatttactttaggaatgagcgaaaccatttaggtaatga 39650205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 27 - 88
Target Start/End: Original strand, 42883723 - 42883784
Alignment:
Q  27 cgtgggttaactcatgcaaatttaacactagtgcaaattaacatgcgtaggggtattttgga 88  Q
    |||| |||||||||||||||||||||||| | |  | |||||||| |||||| |||||||||    
T  42883723 cgtgagttaactcatgcaaatttaacacttgcgtgagttaacatgtgtagggatattttgga 42883784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 57
Target Start/End: Original strand, 5603112 - 5603160
Alignment:
Q  9 gtgacttaagtcacgcaacgtgggttaactcatgcaaatttaacactag 57  Q
    ||||||||| || || |||||| ||||||||| ||||||||||||||||    
T  5603112 gtgacttaactcgcgtaacgtgagttaactcacgcaaatttaacactag 5603160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 36; Significance: 0.00000000002; HSPs: 5)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 76 - 127
Target Start/End: Original strand, 9448715 - 9448766
Alignment:
Q  76 ggggtattttggatttttactttgagaatgagcgaaactatttggataatga 127  Q
    |||| |||||||| |||||||||||||||||| ||||| |||||||||||||    
T  9448715 ggggcattttggacttttactttgagaatgagtgaaaccatttggataatga 9448766  T

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Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 64 - 127
Target Start/End: Original strand, 23558989 - 23559052
Alignment:
Q  64 ttaacatgcgtaggggtattttggatttttactttgagaatgagcgaaactatttggataatga 127  Q
    |||||||||||||||| |||||||| |||||| |||  |||||||| ||| |||||||||||||    
T  23558989 ttaacatgcgtaggggcattttggacttttaccttggcaatgagcggaaccatttggataatga 23559052  T

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Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 64 - 127
Target Start/End: Original strand, 33220793 - 33220856
Alignment:
Q  64 ttaacatgcgtaggggtattttggatttttactttgagaatgagcgaaactatttggataatga 127  Q
    |||||||||||||||| |||||| | |||||||||| ||||||| ||||| |||||| ||||||    
T  33220793 ttaacatgcgtaggggcattttgaacttttactttgggaatgagtgaaaccatttgggtaatga 33220856  T

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Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 59
Target Start/End: Original strand, 17875313 - 17875365
Alignment:
Q  7 gcgtgacttaagtcacgcaacgtgggttaactcatgcaaatttaacactagtg 59  Q
    |||||| ||||||||||||||||| ||||| ||| ||||||| ||||||||||    
T  17875313 gcgtgagttaagtcacgcaacgtgagttaagtcacgcaaattaaacactagtg 17875365  T

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Target: chr8; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 87
Target Start/End: Original strand, 1349196 - 1349248
Alignment:
Q  35 aactcatgcaaatttaacactagtgcaaattaacatgcgtaggggtattttgg 87  Q
    |||||| |||||||||||| |||||  | |||||||||||| |||||||||||    
T  1349196 aactcacgcaaatttaacaatagtgtgagttaacatgcgtaagggtattttgg 1349248  T

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Target: chr6 (Bit Score: 36; Significance: 0.00000000002; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 59 - 138
Target Start/End: Complemental strand, 17436113 - 17436034
Alignment:
Q  59 gcaaattaacatgcgtaggggtattttggatttttactttgagaatgagcgaaactatttggataatgaacaagattcat 138  Q
    |||| ||||||||||||| || ||||| || |||||||||| ||||||||| ||| ||||| ||||||| ||| ||||||    
T  17436113 gcaagttaacatgcgtagaggcattttagacttttactttgggaatgagcggaaccatttgaataatgagcaaaattcat 17436034  T

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Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 7 - 57
Target Start/End: Original strand, 807132 - 807182
Alignment:
Q  7 gcgtgacttaagtcacgcaacgtgggttaactcatgcaaatttaacactag 57  Q
    |||||||||||||||||||  ||| ||||||||| ||||||||||||||||    
T  807132 gcgtgacttaagtcacgcagtgtgagttaactcacgcaaatttaacactag 807182  T

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Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 127
Target Start/End: Complemental strand, 14153439 - 14153363
Alignment:
Q  51 acactagtgcaaattaacatgcgtaggggtattttggatttttactttgagaatgagcgaaactatttggataatga 127  Q
    ||||||| |||  ||||||||||||||||||||||||   ||||||||| |||||||| |||  |||||| ||||||    
T  14153439 acactagcgcatgttaacatgcgtaggggtattttggtcatttactttgggaatgagcaaaatcatttgggtaatga 14153363  T

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Target: chr6; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 120
Target Start/End: Complemental strand, 806617 - 806561
Alignment:
Q  64 ttaacatgcgtaggggtattttggatttttactttgagaatgagcgaaactatttgg 120  Q
    ||||||| |||||| ||||||| ||  |||||||||||||||||| ||||| |||||    
T  806617 ttaacatacgtaggagtattttagacatttactttgagaatgagcaaaactgtttgg 806561  T

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Target: scaffold1763 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold1763
Description:

Target: scaffold1763; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 120
Target Start/End: Original strand, 370 - 426
Alignment:
Q  64 ttaacatgcgtaggggtattttggatttttactttgagaatgagcgaaactatttgg 120  Q
    ||||||||| || ||| |||| |||||||||||||| ||||||||||||| ||||||    
T  370 ttaacatgcataagggcatttgggatttttactttgggaatgagcgaaaccatttgg 426  T

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Target: scaffold0041 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 119
Target Start/End: Original strand, 24366 - 24426
Alignment:
Q  59 gcaaattaacatgcgtaggggtattttggatttttactttgagaatgagcgaaactatttg 119  Q
    |||| |||||||||||||||| |||||  | |||||||||| |||||||||| ||| ||||    
T  24366 gcaagttaacatgcgtaggggcattttaaacttttactttgggaatgagcgatactgtttg 24426  T

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