View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16007_high_5 (Length: 222)
Name: NF16007_high_5
Description: NF16007
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16007_high_5 |
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Alignment Details
Target: chr5 (Bit Score: 168; Significance: 3e-90; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 168; E-Value: 3e-90
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 7033302 - 7033081
Alignment:
| Q |
1 |
gactaaccgtgtcttgtctgttaaaatatataagtaattatctatcttcatttaatttaaacatatttgcgggcttgtttgttatttcaaatcctatgtt |
100 |
Q |
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| T |
7033302 |
gactaaccgtgtcttgtctgttaaaatatataagcaattatctatcttgatttaatttaaacatatttgcgggcttgtttgttatttcaaatcctatgtt |
7033203 |
T |
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| Q |
101 |
ggcattgtttgcgcactctcttagaatttgaattggagctaattcaaatcttacaatgttggtttataatgtaacgattg-------cttagaaacacat |
193 |
Q |
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| T |
7033202 |
ggcattgtttgcgcactctcttagaatttgaattgaagctaattcaaatcttacaatgttggtttataatgtaacaattgtcatccacttacaaacaaat |
7033103 |
T |
|
| Q |
194 |
atctcatctaaagcatggtctg |
215 |
Q |
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||||||||||||||||| |||| |
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| T |
7033102 |
atctcatctaaagcatgatctg |
7033081 |
T |
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