View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16008_high_12 (Length: 251)
Name: NF16008_high_12
Description: NF16008
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16008_high_12 |
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| [»] chr5 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 181; Significance: 7e-98; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 181; E-Value: 7e-98
Query Start/End: Original strand, 55 - 251
Target Start/End: Original strand, 6081754 - 6081950
Alignment:
| Q |
55 |
atatatcatttctcttctattaattttataagaagatttatgaataagtatatatattagaaaagagaacattaaataagttagttaaaatatctttata |
154 |
Q |
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| T |
6081754 |
atatatcatttctcttctattaattttataagaagatttatgaagaagtatatatattagaaaaaagaacattaaataagttagttaaaatatctttata |
6081853 |
T |
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| Q |
155 |
agatttctttattagtagtttgtataccaaatccaatcttttgaagttattataataaagagaaagcagagatagttgctagttgaggagcgtgagt |
251 |
Q |
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| T |
6081854 |
agatttctttattagtagtttgtataccaaatccaatcttttgaagttattataataaagagaaagcagagatagttgttagttgaggagtgtgagt |
6081950 |
T |
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