View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1600_low_8 (Length: 284)
Name: NF1600_low_8
Description: NF1600
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1600_low_8 |
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Alignment Details
Target: chr5 (Bit Score: 257; Significance: 1e-143; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 1 - 268
Target Start/End: Complemental strand, 12266421 - 12266153
Alignment:
| Q |
1 |
tagctaaaggtcaaggtttgttgttgggtcaaatatgtcaagttgtgtagctttcaaaaggatttttt-agttcattttaaaacaaggacttcatagtat |
99 |
Q |
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| T |
12266421 |
tagctaaagttcaaggtttgttgttgggtcaaatatgtcaagttgtgtagctttcaaaaggatttttttagttcattttaaaacaaggacttcatagtat |
12266322 |
T |
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| Q |
100 |
gtggttgaagatggagtagatagataatagatgcaaaaaagggcacacattgtataatgtgattaagtagaaattgtcaagcatttaggggtattaatta |
199 |
Q |
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| T |
12266321 |
gtggttgaagatggagtagatagataatagatgcaaaaaagggcacacattgtataatgtgattaagtagaaattgtcaagcatttaggggtattaatta |
12266222 |
T |
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| Q |
200 |
agagttgttttttgggggtaatgtttctgtttgggggataattctccaagggagagtgatagtacaata |
268 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
12266221 |
agagttgttttttgggggtaatgtttctgtttgggggataattctccaagggagagtgatagtacaata |
12266153 |
T |
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