View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16010_high_26 (Length: 209)
Name: NF16010_high_26
Description: NF16010
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16010_high_26 |
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Alignment Details
Target: chr5 (Bit Score: 113; Significance: 2e-57; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 1 - 192
Target Start/End: Original strand, 43369380 - 43369569
Alignment:
| Q |
1 |
agagatagatctttaagttctttaattatttgatttagagtttgnnnnnnntgccaactactttgaagaacttagtttttaaaattgtgaagagtatcct |
100 |
Q |
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| T |
43369380 |
agagatagatctttaagttctttaattatttgatttagagtttgaaaaaa-tgccaactactttgaagaacttagtttttaaaattgtgaagagtatcct |
43369478 |
T |
|
| Q |
101 |
ttgtatataaaaaatgtgtacatgttannnnnnnnnnnnnnnnagtgcatgttcttgatacatcctttcatttttatcgtcacgttgaaatg |
192 |
Q |
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| T |
43369479 |
ttgtatataaaaaatgtgtacatgtta-tttttttatttttttagtgcatgttcttgatacatcctttcatttttatcgtcacgttgaaatg |
43369569 |
T |
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