View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16010_high_5 (Length: 443)

Name: NF16010_high_5
Description: NF16010
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16010_high_5
NF16010_high_5
[»] scaffold0514 (1 HSPs)
scaffold0514 (1-432)||(1861-2295)
[»] scaffold0470 (2 HSPs)
scaffold0470 (57-430)||(9653-10013)
scaffold0470 (150-195)||(7302-7347)
[»] chr8 (53 HSPs)
chr8 (57-430)||(6620331-6620691)
chr8 (233-430)||(6794163-6794359)
chr8 (104-308)||(6594812-6595022)
chr8 (293-430)||(6594658-6594795)
chr8 (1-56)||(23708976-23709031)
chr8 (1-56)||(28713093-28713148)
chr8 (1-56)||(28720440-28720495)
chr8 (1-56)||(28728082-28728137)
chr8 (1-56)||(35701843-35701898)
chr8 (4-57)||(10591892-10591945)
chr8 (1-58)||(27300344-27300401)
chr8 (1-58)||(40459778-40459835)
chr8 (1-56)||(18549979-18550034)
chr8 (1-56)||(32674248-32674303)
chr8 (4-57)||(21649187-21649240)
chr8 (1-56)||(37784390-37784445)
chr8 (4-58)||(14531619-14531673)
chr8 (1-58)||(34838286-34838343)
chr8 (1-53)||(14228710-14228762)
chr8 (12-56)||(22203242-22203286)
chr8 (1-56)||(1646256-1646311)
chr8 (1-56)||(4148671-4148726)
chr8 (1-56)||(5742673-5742728)
chr8 (1-56)||(28156203-28156258)
chr8 (1-56)||(34641545-34641600)
chr8 (19-56)||(41776186-41776223)
chr8 (1-56)||(6440081-6440137)
chr8 (12-56)||(34578404-34578448)
chr8 (1-56)||(22836155-22836210)
chr8 (18-57)||(36675335-36675374)
chr8 (1-56)||(40380281-40380336)
chr8 (1-56)||(42688427-42688482)
chr8 (1-59)||(9985694-9985752)
chr8 (1-59)||(29509263-29509321)
chr8 (1-58)||(5924808-5924865)
chr8 (150-195)||(6592279-6592324)
chr8 (150-195)||(6617984-6618029)
chr8 (19-56)||(13924022-13924059)
chr8 (19-56)||(14233667-14233704)
chr8 (29-58)||(16881096-16881125)
chr8 (12-53)||(18411322-18411363)
chr8 (1-58)||(35937528-35937585)
chr8 (19-56)||(38939212-38939249)
chr8 (1-54)||(43186298-43186351)
chr8 (1-53)||(3893414-3893466)
chr8 (1-53)||(6105452-6105504)
chr8 (1-57)||(10344323-10344379)
chr8 (1-57)||(14548839-14548895)
chr8 (12-52)||(32234479-32234519)
chr8 (4-56)||(33635582-33635634)
chr8 (1-56)||(38675603-38675659)
chr8 (17-53)||(39031244-39031280)
chr8 (1-60)||(44061713-44061773)
[»] chr1 (44 HSPs)
chr1 (1-56)||(8577518-8577573)
chr1 (1-58)||(12990485-12990542)
chr1 (1-56)||(22674712-22674767)
chr1 (1-55)||(5574275-5574329)
chr1 (1-59)||(23400005-23400063)
chr1 (1-59)||(41425239-41425297)
chr1 (8-56)||(41564903-41564951)
chr1 (2-58)||(50796000-50796056)
chr1 (1-56)||(21854480-21854535)
chr1 (1-58)||(40118731-40118788)
chr1 (1-58)||(43105103-43105160)
chr1 (4-56)||(1100217-1100269)
chr1 (1-56)||(26585189-26585244)
chr1 (4-58)||(6396325-6396379)
chr1 (1-58)||(26760560-26760617)
chr1 (1-57)||(3919299-3919355)
chr1 (4-56)||(11038262-11038314)
chr1 (1-57)||(31244749-31244805)
chr1 (1-57)||(48390093-48390148)
chr1 (1-56)||(12999838-12999893)
chr1 (19-58)||(16252782-16252821)
chr1 (1-56)||(18610773-18610828)
chr1 (2-57)||(25239252-25239307)
chr1 (1-56)||(26501295-26501350)
chr1 (1-56)||(27352630-27352685)
chr1 (2-57)||(27578181-27578236)
chr1 (1-56)||(29489375-29489430)
chr1 (1-56)||(43457835-43457890)
chr1 (16-58)||(11121623-11121665)
chr1 (11-57)||(11796316-11796362)
chr1 (1-47)||(11897183-11897229)
chr1 (1-58)||(46281434-46281492)
chr1 (1-50)||(7645567-7645616)
chr1 (1-57)||(47642622-47642679)
chr1 (1-56)||(649768-649824)
chr1 (1-56)||(4213072-4213128)
chr1 (3-55)||(26839383-26839435)
chr1 (1-56)||(29706718-29706774)
chr1 (1-56)||(30631859-30631915)
chr1 (1-56)||(37619544-37619599)
chr1 (1-53)||(44161788-44161840)
chr1 (1-53)||(48336455-48336506)
chr1 (1-56)||(49615293-49615346)
chr1 (19-55)||(50460735-50460771)
[»] chr2 (50 HSPs)
chr2 (1-58)||(18749379-18749436)
chr2 (1-57)||(5852473-5852529)
chr2 (1-56)||(12256901-12256956)
chr2 (1-59)||(44897623-44897681)
chr2 (4-56)||(19637229-19637281)
chr2 (4-56)||(19835822-19835874)
chr2 (1-56)||(30339993-30340048)
chr2 (1-56)||(34141442-34141497)
chr2 (1-59)||(6328664-6328722)
chr2 (1-56)||(11152715-11152770)
chr2 (1-56)||(26387875-26387930)
chr2 (1-55)||(9384376-9384430)
chr2 (1-55)||(34373006-34373060)
chr2 (12-57)||(11126462-11126507)
chr2 (4-61)||(35705936-35705992)
chr2 (4-56)||(12208442-12208494)
chr2 (1-53)||(17999749-17999801)
chr2 (4-56)||(27529529-27529581)
chr2 (1-53)||(28679131-28679183)
chr2 (1-53)||(38027631-38027683)
chr2 (2-53)||(3366414-3366465)
chr2 (4-59)||(33559636-33559691)
chr2 (6-57)||(35203770-35203821)
chr2 (4-59)||(36763543-36763597)
chr2 (1-56)||(40721771-40721826)
chr2 (2-56)||(29893610-29893664)
chr2 (15-56)||(3839410-3839451)
chr2 (4-57)||(11728140-11728193)
chr2 (23-56)||(40115526-40115559)
chr2 (1-57)||(25094351-25094407)
chr2 (19-59)||(27538939-27538979)
chr2 (1-56)||(36719153-36719209)
chr2 (1-57)||(38021355-38021411)
chr2 (18-57)||(305991-306030)
chr2 (1-56)||(4114437-4114492)
chr2 (1-56)||(6884910-6884965)
chr2 (1-56)||(8352835-8352890)
chr2 (1-56)||(20247883-20247938)
chr2 (1-56)||(29168725-29168780)
chr2 (11-57)||(22303202-22303248)
chr2 (1-58)||(40210083-40210141)
chr2 (1-59)||(43621964-43622022)
chr2 (1-58)||(13850200-13850257)
chr2 (4-56)||(4858113-4858165)
chr2 (1-60)||(12784414-12784474)
chr2 (16-56)||(24766152-24766192)
chr2 (1-57)||(36376865-36376921)
chr2 (15-55)||(37076658-37076698)
chr2 (15-55)||(39147766-39147806)
chr2 (1-53)||(41157017-41157069)
[»] chr7 (44 HSPs)
chr7 (1-56)||(27704435-27704490)
chr7 (1-56)||(48639399-48639454)
chr7 (1-55)||(17039158-17039212)
chr7 (1-56)||(28548237-28548292)
chr7 (1-56)||(41538482-41538537)
chr7 (1-52)||(41910201-41910252)
chr7 (1-59)||(45335859-45335917)
chr7 (1-57)||(47944981-47945038)
chr7 (1-57)||(47950411-47950468)
chr7 (4-56)||(11070228-11070280)
chr7 (1-57)||(30538625-30538681)
chr7 (1-57)||(37969930-37969986)
chr7 (15-58)||(40207830-40207873)
chr7 (1-58)||(2600550-2600607)
chr7 (1-53)||(640395-640447)
chr7 (1-57)||(11789707-11789763)
chr7 (12-56)||(33341152-33341196)
chr7 (1-53)||(37385249-37385301)
chr7 (1-56)||(39415418-39415473)
chr7 (9-55)||(23034337-23034383)
chr7 (1-58)||(33050181-33050238)
chr7 (19-59)||(25272599-25272639)
chr7 (1-57)||(29763829-29763885)
chr7 (1-57)||(41458916-41458972)
chr7 (1-56)||(5378627-5378682)
chr7 (19-58)||(27866560-27866599)
chr7 (1-56)||(35491427-35491482)
chr7 (1-56)||(40693544-40693599)
chr7 (1-56)||(42060656-42060711)
chr7 (1-56)||(48522156-48522211)
chr7 (1-55)||(34349043-34349097)
chr7 (1-55)||(35212971-35213025)
chr7 (30-59)||(1814352-1814381)
chr7 (1-58)||(2347075-2347132)
chr7 (4-57)||(25614840-25614893)
chr7 (30-59)||(26153643-26153672)
chr7 (1-53)||(32529870-32529922)
chr7 (26-59)||(33465069-33465102)
chr7 (29-58)||(42598252-42598281)
chr7 (31-59)||(36580737-36580765)
chr7 (19-59)||(37848643-37848683)
chr7 (16-56)||(41018663-41018703)
chr7 (1-57)||(44175544-44175600)
chr7 (28-56)||(45154582-45154610)
[»] chr5 (43 HSPs)
chr5 (1-56)||(39032620-39032675)
chr5 (4-56)||(18729308-18729360)
chr5 (1-56)||(20985545-20985600)
chr5 (4-56)||(3031834-3031886)
chr5 (1-56)||(12891112-12891167)
chr5 (1-56)||(24329998-24330053)
chr5 (1-56)||(25585472-25585527)
chr5 (1-56)||(29765830-29765885)
chr5 (1-56)||(34693232-34693287)
chr5 (1-55)||(35616815-35616869)
chr5 (2-55)||(37821142-37821195)
chr5 (1-52)||(3154659-3154710)
chr5 (1-56)||(14522980-14523035)
chr5 (1-59)||(1107978-1108036)
chr5 (1-55)||(30103467-30103521)
chr5 (2-56)||(35578860-35578914)
chr5 (16-57)||(31748335-31748376)
chr5 (1-58)||(36899497-36899553)
chr5 (19-56)||(38919863-38919900)
chr5 (19-59)||(8442167-8442207)
chr5 (16-56)||(19844340-19844380)
chr5 (1-56)||(27005495-27005550)
chr5 (1-56)||(29803225-29803280)
chr5 (2-56)||(2863550-2863604)
chr5 (1-59)||(4820152-4820210)
chr5 (29-59)||(26627327-26627357)
chr5 (1-55)||(33893587-33893641)
chr5 (19-57)||(38387609-38387647)
chr5 (1-58)||(41175721-41175779)
chr5 (19-56)||(9957224-9957261)
chr5 (19-56)||(12203158-12203195)
chr5 (1-58)||(30420624-30420681)
chr5 (1-58)||(30574393-30574450)
chr5 (11-56)||(31626102-31626147)
chr5 (30-59)||(34698777-34698806)
chr5 (17-58)||(40584248-40584289)
chr5 (19-56)||(43153083-43153120)
chr5 (1-56)||(2629818-2629874)
chr5 (1-57)||(9599744-9599800)
chr5 (1-56)||(11954431-11954487)
chr5 (30-58)||(14070660-14070688)
chr5 (150-190)||(22796851-22796891)
chr5 (1-57)||(31006058-31006114)
[»] chr4 (57 HSPs)
chr4 (1-56)||(36110134-36110189)
chr4 (1-56)||(48650272-48650327)
chr4 (4-56)||(29863551-29863603)
chr4 (1-56)||(29577452-29577507)
chr4 (1-56)||(50291282-50291337)
chr4 (1-55)||(38960676-38960730)
chr4 (1-58)||(55960698-55960755)
chr4 (1-56)||(4877966-4878022)
chr4 (8-56)||(23133560-23133608)
chr4 (1-56)||(1987729-1987784)
chr4 (1-56)||(4577557-4577612)
chr4 (1-56)||(31318753-31318808)
chr4 (4-59)||(32901326-32901381)
chr4 (19-58)||(36871191-36871230)
chr4 (11-54)||(43307395-43307438)
chr4 (17-56)||(43511679-43511718)
chr4 (1-56)||(46355309-46355364)
chr4 (1-56)||(51107457-51107512)
chr4 (1-56)||(54803344-54803399)
chr4 (1-59)||(36947108-36947166)
chr4 (18-56)||(48791630-48791668)
chr4 (1-58)||(3475867-3475924)
chr4 (1-58)||(4949250-4949307)
chr4 (19-56)||(31413809-31413846)
chr4 (19-59)||(7795022-7795062)
chr4 (1-53)||(30250316-30250368)
chr4 (1-57)||(44539293-44539349)
chr4 (1-56)||(50890089-50890144)
chr4 (25-56)||(8485577-8485608)
chr4 (1-56)||(20056396-20056451)
chr4 (19-58)||(24310544-24310583)
chr4 (5-56)||(26442410-26442461)
chr4 (1-56)||(35037609-35037664)
chr4 (1-56)||(40629356-40629411)
chr4 (1-56)||(44272826-44272881)
chr4 (1-56)||(45521595-45521650)
chr4 (1-56)||(47105911-47105966)
chr4 (1-56)||(53662444-53662499)
chr4 (29-59)||(4974108-4974138)
chr4 (16-58)||(31995947-31995989)
chr4 (1-31)||(32294776-32294806)
chr4 (2-56)||(45418067-45418121)
chr4 (19-56)||(1868916-1868953)
chr4 (1-58)||(31240646-31240703)
chr4 (29-58)||(54251494-54251523)
chr4 (1-56)||(10250531-10250586)
chr4 (1-57)||(14090066-14090122)
chr4 (1-57)||(25523214-25523270)
chr4 (1-53)||(34114133-34114185)
chr4 (4-52)||(37775446-37775494)
chr4 (1-53)||(41170776-41170827)
chr4 (1-56)||(42815404-42815460)
chr4 (4-56)||(42853939-42853991)
chr4 (1-57)||(51224854-51224910)
chr4 (1-56)||(52669625-52669680)
chr4 (12-56)||(53781864-53781907)
chr4 (1-56)||(55609181-55609236)
[»] chr3 (54 HSPs)
chr3 (1-56)||(29555854-29555909)
chr3 (3-56)||(14839063-14839116)
chr3 (1-58)||(55264815-55264872)
chr3 (1-57)||(30664502-30664558)
chr3 (1-57)||(47141616-47141672)
chr3 (1-56)||(2280177-2280232)
chr3 (1-56)||(7351654-7351709)
chr3 (1-56)||(32151888-32151943)
chr3 (1-56)||(50025714-50025769)
chr3 (6-56)||(45517678-45517728)
chr3 (4-58)||(54233487-54233541)
chr3 (1-57)||(25559703-25559759)
chr3 (1-52)||(39629854-39629906)
chr3 (11-55)||(44689793-44689837)
chr3 (12-59)||(17118394-17118441)
chr3 (1-56)||(42888788-42888843)
chr3 (1-56)||(48205045-48205100)
chr3 (1-59)||(1402647-1402705)
chr3 (1-59)||(16295461-16295519)
chr3 (2-56)||(25806545-25806599)
chr3 (4-58)||(52100259-52100313)
chr3 (1-58)||(1295330-1295387)
chr3 (1-58)||(11327106-11327163)
chr3 (19-56)||(35368622-35368659)
chr3 (1-54)||(38471644-38471697)
chr3 (1-58)||(42643233-42643290)
chr3 (16-57)||(51137067-51137108)
chr3 (1-56)||(288725-288781)
chr3 (12-56)||(9159063-9159107)
chr3 (1-57)||(38296678-38296734)
chr3 (15-54)||(25595942-25595981)
chr3 (1-56)||(36301224-36301279)
chr3 (19-58)||(43149366-43149405)
chr3 (15-54)||(52381184-52381223)
chr3 (28-58)||(6178468-6178498)
chr3 (2-56)||(9027613-9027667)
chr3 (18-56)||(34145571-34145609)
chr3 (18-56)||(36799398-36799436)
chr3 (1-55)||(43895001-43895055)
chr3 (1-59)||(50879592-50879650)
chr3 (19-56)||(29057659-29057696)
chr3 (19-56)||(29846914-29846951)
chr3 (1-58)||(41877686-41877743)
chr3 (27-56)||(53021189-53021218)
chr3 (12-56)||(884534-884578)
chr3 (1-57)||(14847534-14847590)
chr3 (1-56)||(16479632-16479687)
chr3 (2-58)||(19418174-19418230)
chr3 (12-56)||(33971883-33971927)
chr3 (4-56)||(34900640-34900692)
chr3 (28-56)||(38957543-38957571)
chr3 (1-60)||(41308921-41308980)
chr3 (1-57)||(48944726-48944782)
chr3 (16-56)||(50559243-50559283)
[»] scaffold0014 (1 HSPs)
scaffold0014 (1-56)||(145061-145116)
[»] chr6 (13 HSPs)
chr6 (1-56)||(34792022-34792077)
chr6 (1-58)||(27790251-27790308)
chr6 (1-57)||(6997566-6997622)
chr6 (19-57)||(9395360-9395398)
chr6 (19-59)||(16121160-16121200)
chr6 (1-56)||(3339515-3339570)
chr6 (1-59)||(25924880-25924938)
chr6 (19-56)||(2165323-2165360)
chr6 (19-56)||(2176956-2176993)
chr6 (1-58)||(16743282-16743339)
chr6 (1-57)||(31869066-31869122)
chr6 (29-58)||(32644621-32644650)
chr6 (1-57)||(28883764-28883820)
[»] scaffold0024 (1 HSPs)
scaffold0024 (1-53)||(48657-48709)
[»] scaffold0651 (1 HSPs)
scaffold0651 (1-56)||(4862-4917)
[»] scaffold0016 (1 HSPs)
scaffold0016 (3-56)||(204463-204516)
[»] scaffold0178 (1 HSPs)
scaffold0178 (4-59)||(9773-9829)
[»] scaffold0011 (1 HSPs)
scaffold0011 (1-57)||(18594-18650)
[»] scaffold0286 (1 HSPs)
scaffold0286 (19-56)||(17049-17086)
[»] scaffold0172 (1 HSPs)
scaffold0172 (1-58)||(16973-17030)
[»] scaffold0056 (1 HSPs)
scaffold0056 (1-56)||(76635-76690)
[»] scaffold0020 (1 HSPs)
scaffold0020 (1-57)||(155905-155961)


Alignment Details
Target: scaffold0514 (Bit Score: 369; Significance: 0; HSPs: 1)
Name: scaffold0514
Description:

Target: scaffold0514; HSP #1
Raw Score: 369; E-Value: 0
Query Start/End: Original strand, 1 - 432
Target Start/End: Original strand, 1861 - 2295
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctcatacccatgtccccacgtcaccgtactaataagaatttggaacc 100  Q
    |||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||    
T  1861 gagagagaagattgtacaaaagttatacaaaaatggttgtacaaatatcatttctcataaccatgtccccacgtcaccatactaataagaatttggaacc 1960  T
Q  101 tcgatgaggagtatagtcaacaccaaaaactatacaaattgtgaaatgtaatacacagttgagaagttgttaaaggtaagatttttcattaaattgaaag 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1961 tcgatgaggagtatagtcaacaccaaaaactatacaaattgtgaaatgtaatacacagttgagaagttgttaaaggtaagatttttcattaaattgaaag 2060  T
Q  201 cagattggaatttcaaattct---agnnnnnnnnttggtaatagaaattttactttttaattagaatatttaacgtaacatgactgaaatcctatgatcc 297  Q
    |||||||||||||||||||||   ||        |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  2061 cagattggaatttcaaattctagaagaaaaaaaattggtaatagaaattttactttttaattagaagatttaacgtaacatgactgaaatcctatgatcc 2160  T
Q  298 ggttgaattttagttctctattctttttgttagagtggagagtttttaaacgatttaacatctgcaacgggggataaagatagcccgacatatttctata 397  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2161 ggttgaattttagttctctaatctttttgttagagtggagagtttttaaacgatttaacatctgcaacgggggataaagatagcccgacatatttctata 2260  T
Q  398 tctgaaatgattttttacaactattttgttatatt 432  Q
    |||||||||||||||||| ||||||||||||||||    
T  2261 tctgaaatgattttttacgactattttgttatatt 2295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0470 (Bit Score: 221; Significance: 1e-121; HSPs: 2)
Name: scaffold0470
Description:

Target: scaffold0470; HSP #1
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 57 - 430
Target Start/End: Complemental strand, 10013 - 9653
Alignment:
Q  57 atacccatgtccccacgtcaccgtactaataagaatttggaacctcgatgaggagtatagtcaacaccaaaaactatacaaattgtgaaatgtaatacac 156  Q
    |||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||               |    
T  10013 atactcatgtccccacgtcaccatactaataagaatttggaacctcgatgaggagtatagtcaacaccaaaaagtatacaaatt---------------c 9929  T
Q  157 agttgagaagttgttaaaggtaagatttttcattaaattgaaagcagattggaatttcaaattctagnnnnnnnnt---tggtaatagaaattttacttt 253  Q
    ||||||||||| |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||            ||||||||||||||||| |||    
T  9928 agttgagaagtggttaaaggtaagatttttcattaaattgaaagtagactggaatttcaaattctagaaagaaaaaaaatggtaatagaaattttaattt 9829  T
Q  254 ttaattagaatatttaacgtaacatgactgaaatcctatgatccggttgaattttagttctctattctttttgttagagtggagagtttttaaacgattt 353  Q
    |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  9828 ttaattagaagatttaacataacatgactgaaatcctatgatccggttgaattttagttctctattctttttgttagagtggtgagtttttaaacgattt 9729  T
Q  354 aacatctgcaacgggggataaagatagcccgacatatttctatatctgaaatgattttttacaactattttgttata 430  Q
    ||||||| |||  ||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||    
T  9728 aacatct-caataggggataaagatagcccgacatatttctatatctgaaatgattttctacgactattttgttata 9653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0470; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 150 - 195
Target Start/End: Complemental strand, 7347 - 7302
Alignment:
Q  150 aatacacagttgagaagttgttaaaggtaagatttttcattaaatt 195  Q
    ||||||| ||||||| | ||||||||||||||||||||||||||||    
T  7347 aatacacggttgagaggctgttaaaggtaagatttttcattaaatt 7302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 221; Significance: 1e-121; HSPs: 53)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 57 - 430
Target Start/End: Complemental strand, 6620691 - 6620331
Alignment:
Q  57 atacccatgtccccacgtcaccgtactaataagaatttggaacctcgatgaggagtatagtcaacaccaaaaactatacaaattgtgaaatgtaatacac 156  Q
    |||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||               |    
T  6620691 atactcatgtccccacgtcaccatactaataagaatttggaacctcgatgaggagtatagtcaacaccaaaaagtatacaaatt---------------c 6620607  T
Q  157 agttgagaagttgttaaaggtaagatttttcattaaattgaaagcagattggaatttcaaattctagnnnnnnnnt---tggtaatagaaattttacttt 253  Q
    ||||||||||| |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||            ||||||||||||||||| |||    
T  6620606 agttgagaagtggttaaaggtaagatttttcattaaattgaaagtagactggaatttcaaattctagaaagaaaaaaaatggtaatagaaattttaattt 6620507  T
Q  254 ttaattagaatatttaacgtaacatgactgaaatcctatgatccggttgaattttagttctctattctttttgttagagtggagagtttttaaacgattt 353  Q
    |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  6620506 ttaattagaagatttaacataacatgactgaaatcctatgatccggttgaattttagttctctattctttttgttagagtggggagtttttaaacgattt 6620407  T
Q  354 aacatctgcaacgggggataaagatagcccgacatatttctatatctgaaatgattttttacaactattttgttata 430  Q
    ||||||| |||  ||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||    
T  6620406 aacatct-caataggggataaagatagcccgacatatttctatatctgaaatgattttctacgactattttgttata 6620331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 233 - 430
Target Start/End: Complemental strand, 6794359 - 6794163
Alignment:
Q  233 tggtaatagaaattttactttttaattagaatatttaacgtaacatgactgaaatcctatgatccggttgaattttagttctctattctttttgttagag 332  Q
    ||||||||||||||||| ||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6794359 tggtaatagaaattttaatttttaattagaagatttaacataacatgactgaaatcctatgatccggttgaattttagttctctattctttttgttagag 6794260  T
Q  333 tggagagtttttaaacgatttaacatctgcaacgggggataaagatagcccgacatatttctatatctgaaatgattttttacaactattttgttata 430  Q
    |||||||||||||||||||||||||||| |||  ||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||    
T  6794259 tggagagtttttaaacgatttaacatct-caataggggataaagatagcccgacatatttctatatctgaaatgattttctacgactattttgttata 6794163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 131; E-Value: 8e-68
Query Start/End: Original strand, 104 - 308
Target Start/End: Complemental strand, 6595022 - 6594812
Alignment:
Q  104 atgaggagtatagtcaacaccaaaaactatacaaattgtgaaatgt----aatacacagttgagaagttgttaaaggtaagatttttcattaaattgaaa 199  Q
    |||||||| ||||||||||||||||| |||||||||||||||||||    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6595022 atgaggagcatagtcaacaccaaaaagtatacaaattgtgaaatgtttgaaatacacagttgagaagttgttaaaggtaagatttttcattaaattgaaa 6594923  T
Q  200 gcagattggaatttcaaattct--agnnnnnnnnttggtaatagaaattttactttttaattagaatatttaacgtaacatgactgaaatcctatgatcc 297  Q
    | ||||||||||||||||||||  ||        |||||||||||||||||| |||| ||||| || |||||||||||||||||||||||||||||||||    
T  6594922 gtagattggaatttcaaattctagagaaaaaaaattggtaatagaaattttaattttcaattaaaagatttaacgtaacatgactgaaatcctatgatcc 6594823  T
Q  298 ggttgaatttt 308  Q
    |||||||||||    
T  6594822 ggttgaatttt 6594812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 293 - 430
Target Start/End: Complemental strand, 6594795 - 6594658
Alignment:
Q  293 gatccggttgaattttagttctctattctttttgtt-agagtggagagtttttaaacgatttaacatctgcaacgggggataaagatagcccgacatatt 391  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||| |||| |||||||||||||||||||||||||    
T  6594795 gatccggttgaattttagttctctattctttttgtttagagtggagagattttaaacgatttaacatct-caacaggggataaagatagcccgacatatt 6594697  T
Q  392 tctatatctgaaatgattttttacaactattttgttata 430  Q
    |||||||||||||||||||| ||| ||||||||||||||    
T  6594696 tctatatctgaaatgattttctacgactattttgttata 6594658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 23709031 - 23708976
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  23709031 gagatagaaggttgtacaaaagttatacaaaaatggttgtacaaatatcatttctc 23708976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 28713148 - 28713093
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    |||||||||||||||| ||||||||||||||||| |||||||||||||||||||||    
T  28713148 gagagagaaggttgtataaaagttatacaaaaatggttgtacaaatatcatttctc 28713093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 28720495 - 28720440
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    |||||||||||||||| ||||||||||||||||| |||||||||||||||||||||    
T  28720495 gagagagaaggttgtataaaagttatacaaaaatggttgtacaaatatcatttctc 28720440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 28728137 - 28728082
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    |||||||||||||||| ||||||||||||||||| |||||||||||||||||||||    
T  28728137 gagagagaaggttgtataaaagttatacaaaaatggttgtacaaatatcatttctc 28728082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 35701843 - 35701898
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  35701843 gagagagaaggttgtacaaaagttgtacaaaaatggttgtacaaatatcatttctc 35701898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 10591892 - 10591945
Alignment:
Q  4 agagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctca 57  Q
    |||||| ||||||||||||||||| |||||||||||||||||||||||||||||    
T  10591892 agagaaagttgtacaaaagttatataaaaatagttgtacaaatatcatttctca 10591945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 27300401 - 27300344
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctcat 58  Q
    ||||||||| |||||||||||||| ||||||||| |||||||||||||||||||||||    
T  27300401 gagagagaaagttgtacaaaagttgtacaaaaatggttgtacaaatatcatttctcat 27300344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 40459778 - 40459835
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctcat 58  Q
    ||||||||| |||||||||||||||||| ||||||||||||||||| |||||||||||    
T  40459778 gagagagaaagttgtacaaaagttataccaaaatagttgtacaaatttcatttctcat 40459835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 18550034 - 18549979
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    ||||||||| ||||||||||||||||||||||||  ||||||||||||||||||||    
T  18550034 gagagagaatgttgtacaaaagttatacaaaaatgattgtacaaatatcatttctc 18549979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 32674248 - 32674303
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    ||||||||| |||||||||||||||||| ||||| |||||||||||||||||||||    
T  32674248 gagagagaaagttgtacaaaagttataccaaaatggttgtacaaatatcatttctc 32674303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 21649187 - 21649240
Alignment:
Q  4 agagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctca 57  Q
    |||||| |||||||||||||| ||||||||| ||||||||||||||||||||||    
T  21649187 agagaaagttgtacaaaagttgtacaaaaatggttgtacaaatatcatttctca 21649240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 37784390 - 37784445
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    |||||||||  ||||||||||||||||| ||||| |||||||||||||||||||||    
T  37784390 gagagagaaaattgtacaaaagttataccaaaatggttgtacaaatatcatttctc 37784445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 4 - 58
Target Start/End: Complemental strand, 14531673 - 14531619
Alignment:
Q  4 agagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctcat 58  Q
    |||||| ||||||||||||||||   |||||||||||||||||||||||||||||    
T  14531673 agagaaagttgtacaaaagttatcataaaatagttgtacaaatatcatttctcat 14531619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 34838286 - 34838343
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctcat 58  Q
    |||||||||| ||||||||||||| ||||||| | | |||||||||||||||||||||    
T  34838286 gagagagaagattgtacaaaagttgtacaaaattggatgtacaaatatcatttctcat 34838343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 14228762 - 14228710
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcattt 53  Q
    ||||||||| ||||||||||||||||   ||||||||||||||||||||||||    
T  14228762 gagagagaaagttgtacaaaagttatcacaaaatagttgtacaaatatcattt 14228710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 12 - 56
Target Start/End: Original strand, 22203242 - 22203286
Alignment:
Q  12 ttgtacaaaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    ||||||||||||| ||||||||| |||||||||||||||||||||    
T  22203242 ttgtacaaaagttgtacaaaaatggttgtacaaatatcatttctc 22203286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 1646311 - 1646256
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    |||||| || |||||| |||| | ||||||||||||||||||||||||||||||||    
T  1646311 gagagataaagttgtataaaaatgatacaaaaatagttgtacaaatatcatttctc 1646256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 4148671 - 4148726
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    |||||||||  ||||||||||||| ||||||||| ||| |||||||||||||||||    
T  4148671 gagagagaatattgtacaaaagttgtacaaaaatggttatacaaatatcatttctc 4148726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 5742673 - 5742728
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    |||||| || |||||||||||||| ||| ||||| |||||||||||||||||||||    
T  5742673 gagagataaagttgtacaaaagttgtaccaaaatggttgtacaaatatcatttctc 5742728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 28156258 - 28156203
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    ||||||||| ||||||||||| || ||| ||||| |||||||||||||||||||||    
T  28156258 gagagagaaagttgtacaaaaattgtaccaaaatggttgtacaaatatcatttctc 28156203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 34641600 - 34641545
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    ||||||||| |||| |||||| ||||| |||||| |||||||||||||||||||||    
T  34641600 gagagagaaagttgcacaaaaattatataaaaatggttgtacaaatatcatttctc 34641545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 19 - 56
Target Start/End: Complemental strand, 41776223 - 41776186
Alignment:
Q  19 aaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    |||||| |||||||||||||||||||||||||||||||    
T  41776223 aaagttgtacaaaaatagttgtacaaatatcatttctc 41776186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 6440137 - 6440081
Alignment:
Q  1 gagagagaaggttgt-acaaaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    ||||||||| ||||| ||||||||| || | ||||||||||||||||||||||||||    
T  6440137 gagagagaaagttgtcacaaaagttgtaaagaaatagttgtacaaatatcatttctc 6440081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 12 - 56
Target Start/End: Original strand, 34578404 - 34578448
Alignment:
Q  12 ttgtacaaaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    |||| |||||||| ||||||||| |||||||||||||||||||||    
T  34578404 ttgttcaaaagttgtacaaaaatggttgtacaaatatcatttctc 34578448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 22836155 - 22836210
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    ||||||||| ||||||||||| || ||  ||||| |||||||||||||||||||||    
T  22836155 gagagagaaagttgtacaaaatttgtatgaaaatggttgtacaaatatcatttctc 22836210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 57
Target Start/End: Complemental strand, 36675374 - 36675335
Alignment:
Q  18 aaaagttatacaaaaatagttgtacaaatatcatttctca 57  Q
    ||||||| ||||||||| ||||||||||||||||||||||    
T  36675374 aaaagttgtacaaaaatggttgtacaaatatcatttctca 36675335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 40380336 - 40380281
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    ||||||||| |||||||||||||| |   ||||||| |||||||||||||||||||    
T  40380336 gagagagaaagttgtacaaaagttgtcataaaatagatgtacaaatatcatttctc 40380281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 42688482 - 42688427
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    |||||||||  || ||||||||||||||||||||  |||||||||||||| |||||    
T  42688482 gagagagaaaattatacaaaagttatacaaaaatgattgtacaaatatcaattctc 42688427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 9985694 - 9985752
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctcata 59  Q
    ||||||||| |||||| ||||||| |   ||||||| ||||||||||||||||||||||    
T  9985694 gagagagaatgttgtataaaagttgtcataaaatagatgtacaaatatcatttctcata 9985752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 29509321 - 29509263
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctcata 59  Q
    ||||||||| |||||  ||||||| ||  ||||| ||||||||||||||||||||||||    
T  29509321 gagagagaaagttgtcaaaaagttgtagcaaaatggttgtacaaatatcatttctcata 29509263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 5924865 - 5924808
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctcat 58  Q
    ||||||||| ||||||||||| ||||   ||||||| ||||| |||||||||||||||    
T  5924865 gagagagaaagttgtacaaaaattattataaaatagatgtacgaatatcatttctcat 5924808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 150 - 195
Target Start/End: Complemental strand, 6592324 - 6592279
Alignment:
Q  150 aatacacagttgagaagttgttaaaggtaagatttttcattaaatt 195  Q
    ||||||| ||||||| |  |||||||||||||||||||||||||||    
T  6592324 aatacacggttgagaggcagttaaaggtaagatttttcattaaatt 6592279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 150 - 195
Target Start/End: Complemental strand, 6618029 - 6617984
Alignment:
Q  150 aatacacagttgagaagttgttaaaggtaagatttttcattaaatt 195  Q
    ||||||| ||||||| |  |||||||||||||||||||||||||||    
T  6618029 aatacacggttgagaggcggttaaaggtaagatttttcattaaatt 6617984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 56
Target Start/End: Complemental strand, 13924059 - 13924022
Alignment:
Q  19 aaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    |||||| ||||||||| |||||||||||||||||||||    
T  13924059 aaagttgtacaaaaatggttgtacaaatatcatttctc 13924022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 56
Target Start/End: Original strand, 14233667 - 14233704
Alignment:
Q  19 aaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    |||||| || ||||||||||||||||||||||||||||    
T  14233667 aaagttgtaaaaaaatagttgtacaaatatcatttctc 14233704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 58
Target Start/End: Original strand, 16881096 - 16881125
Alignment:
Q  29 aaaaatagttgtacaaatatcatttctcat 58  Q
    ||||||||||||||||||||||||||||||    
T  16881096 aaaaatagttgtacaaatatcatttctcat 16881125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 12 - 53
Target Start/End: Original strand, 18411322 - 18411363
Alignment:
Q  12 ttgtacaaaagttatacaaaaatagttgtacaaatatcattt 53  Q
    ||||||||||||| ||| ||||| ||||||||||||||||||    
T  18411322 ttgtacaaaagttgtaccaaaattgttgtacaaatatcattt 18411363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 35937528 - 35937585
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctcat 58  Q
    ||||||||| ||||| |||||||| |   ||||| |||||||||||||||||||||||    
T  35937528 gagagagaaagttgtccaaaagttgttacaaaatggttgtacaaatatcatttctcat 35937585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 56
Target Start/End: Original strand, 38939212 - 38939249
Alignment:
Q  19 aaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    |||||| |||||||||||||||| ||||||||||||||    
T  38939212 aaagttgtacaaaaatagttgtagaaatatcatttctc 38939249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 43186351 - 43186298
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttc 54  Q
    ||||||||| ||||||||||| ||||   |||||| ||||||||||||||||||    
T  43186351 gagagagaaagttgtacaaaaattatcacaaaataattgtacaaatatcatttc 43186298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 3893414 - 3893466
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcattt 53  Q
    |||||| || ||||| ||||| || ||| ||||||||||||||||||||||||    
T  3893414 gagagaaaaagttgttcaaaaattgtaccaaaatagttgtacaaatatcattt 3893466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 6105452 - 6105504
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcattt 53  Q
    ||||||||| |||||  ||||||| || |||||| ||||||||||||||||||    
T  6105452 gagagagaaagttgtcaaaaagttgtaaaaaaatggttgtacaaatatcattt 6105504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 10344379 - 10344323
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctca 57  Q
    ||||||||| ||||| ||||| ||||   ||||||| ||||||||||||||||||||    
T  10344379 gagagagaaagttgtccaaaaattattataaaatagatgtacaaatatcatttctca 10344323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 14548839 - 14548895
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctca 57  Q
    ||||||||| |||||  |||| ||||  |||||| ||||||||||||||||||||||    
T  14548839 gagagagaaagttgtctaaaaattattaaaaaatggttgtacaaatatcatttctca 14548895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 12 - 52
Target Start/End: Original strand, 32234479 - 32234519
Alignment:
Q  12 ttgtacaaaagttatacaaaaatagttgtacaaatatcatt 52  Q
    ||||| |||| ||||| ||||||||||||||||||||||||    
T  32234479 ttgtataaaaattatataaaaatagttgtacaaatatcatt 32234519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 33635634 - 33635582
Alignment:
Q  4 agagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    |||||| ||||||||||  |||||| ||| |||||||| ||||||||||||||    
T  33635634 agagaaagttgtacaaagattataccaaattagttgtataaatatcatttctc 33635582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 38675659 - 38675603
Alignment:
Q  1 gagagagaaggttgt-acaaaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    ||||||||| ||||| | |||| ||||| |||||| |||||||||||||||||||||    
T  38675659 gagagagaaagttgtcataaaaattatagaaaaatggttgtacaaatatcatttctc 38675603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 17 - 53
Target Start/End: Original strand, 39031244 - 39031280
Alignment:
Q  17 caaaagttatacaaaaatagttgtacaaatatcattt 53  Q
    ||||||||||| ||||||| |||||||||||||||||    
T  39031244 caaaagttataaaaaaataattgtacaaatatcattt 39031280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 44061773 - 44061713
Alignment:
Q  1 gagagagaaggttgt-acaaaagttatacaaaaatagttgtacaaatatcatttctcatac 60  Q
    ||||||||| ||||| |||||||||||  |||||| ||||| |||||||||||||| ||||    
T  44061773 gagagagaaagttgtcacaaaagttatcaaaaaatggttgttcaaatatcatttcttatac 44061713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 52; Significance: 1e-20; HSPs: 44)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 8577518 - 8577573
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  8577518 gagagagaaggttgtacaaaagttatacaaaaatggttgtacaaatatcatttctc 8577573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 12990485 - 12990542
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctcat 58  Q
    ||||||||||||||||| |||||| ||||||||| |||||||||||||||||||||||    
T  12990485 gagagagaaggttgtacgaaagttgtacaaaaatggttgtacaaatatcatttctcat 12990542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 22674767 - 22674712
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    ||||||||| ||||||||||| || |||||||||||||||||||||||||||||||    
T  22674767 gagagagaaagttgtacaaaaattgtacaaaaatagttgtacaaatatcatttctc 22674712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 5574275 - 5574329
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttct 55  Q
    |||||||||||||||||||||||| |||||||||  |||||||||||||||||||    
T  5574275 gagagagaaggttgtacaaaagttgtacaaaaatgattgtacaaatatcatttct 5574329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 23400005 - 23400063
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctcata 59  Q
    |||||||||| ||||||||||||| || |||||| ||||||||||||||||||||||||    
T  23400005 gagagagaagattgtacaaaagttgtataaaaatggttgtacaaatatcatttctcata 23400063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 41425297 - 41425239
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctcata 59  Q
    ||||||||| ||||||| |||||| ||| ||||||||||||||||||||||||||||||    
T  41425297 gagagagaaagttgtacgaaagttgtaccaaaatagttgtacaaatatcatttctcata 41425239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 8 - 56
Target Start/End: Original strand, 41564903 - 41564951
Alignment:
Q  8 aaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    ||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  41564903 aaggttgtacaaaagttgtacaaaaatggttgtacaaatatcatttctc 41564951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 50796056 - 50796000
Alignment:
Q  2 agagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctcat 58  Q
    |||||||| |||||| ||||||| ||||||| |||||||||||||||||||||||||    
T  50796056 agagagaatgttgtataaaagttgtacaaaagtagttgtacaaatatcatttctcat 50796000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 21854480 - 21854535
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    ||||||||| |||||||||||||| ||| |||||| ||||||||||||||||||||    
T  21854480 gagagagaaagttgtacaaaagttgtaccaaaataattgtacaaatatcatttctc 21854535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 40118731 - 40118788
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctcat 58  Q
    |||||||||  |||||||||| ||||||||||||  ||||||||||||||||||||||    
T  40118731 gagagagaaaattgtacaaaaattatacaaaaatgattgtacaaatatcatttctcat 40118788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 43105160 - 43105103
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctcat 58  Q
    |||||||||  ||||| |||| ||||||||||||| ||||||||||||||||||||||    
T  43105160 gagagagaaaattgtataaaaattatacaaaaataattgtacaaatatcatttctcat 43105103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 1100269 - 1100217
Alignment:
Q  4 agagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    |||||| ||||||||||| || ||||||||| |||||||||||||||||||||    
T  1100269 agagaaagttgtacaaaaattgtacaaaaatggttgtacaaatatcatttctc 1100217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 26585189 - 26585244
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    |||||| || ||||||||||||||||   |||||||||||||||||||||||||||    
T  26585189 gagagaaaaagttgtacaaaagttatcacaaaatagttgtacaaatatcatttctc 26585244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 4 - 58
Target Start/End: Complemental strand, 6396379 - 6396325
Alignment:
Q  4 agagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctcat 58  Q
    |||||| |||||||||||||| ||| ||||| ||||||| |||||||||||||||    
T  6396379 agagaaagttgtacaaaagttgtaccaaaatggttgtaccaatatcatttctcat 6396325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 26760617 - 26760560
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctcat 58  Q
    |||||| || ||||||||||| || ||||||||| ||||||||||||||| |||||||    
T  26760617 gagagaaaatgttgtacaaaaattgtacaaaaatggttgtacaaatatcaattctcat 26760560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 3919355 - 3919299
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctca 57  Q
    ||||||||| ||||| ||||| |||||  ||||| ||||||||||||||||||||||    
T  3919355 gagagagaaagttgtccaaaaattataacaaaatggttgtacaaatatcatttctca 3919299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 11038314 - 11038262
Alignment:
Q  4 agagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    |||||| ||||||||||| |||||| ||||| |||||| ||||||||||||||    
T  11038314 agagaaagttgtacaaaaattataccaaaatggttgtataaatatcatttctc 11038262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 31244749 - 31244805
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctca 57  Q
    ||||||||| ||||||||||| || |||||||||  || ||||||||||||||||||    
T  31244749 gagagagaatgttgtacaaaaattgtacaaaaatgattatacaaatatcatttctca 31244805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 48390093 - 48390148
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctca 57  Q
    |||||||||| ||||||||||||| ||||||||| ||||||| ||||| ||||||||    
T  48390093 gagagagaagtttgtacaaaagttgtacaaaaatggttgtac-aatataatttctca 48390148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 12999838 - 12999893
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    ||||||||| |||||||||||||| |   ||||| |||||||||||||||||||||    
T  12999838 gagagagaaagttgtacaaaagttgttagaaaatggttgtacaaatatcatttctc 12999893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 58
Target Start/End: Original strand, 16252782 - 16252821
Alignment:
Q  19 aaagttatacaaaaatagttgtacaaatatcatttctcat 58  Q
    |||||| ||||||||| |||||||||||||||||||||||    
T  16252782 aaagttgtacaaaaatggttgtacaaatatcatttctcat 16252821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 18610828 - 18610773
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    ||||||||| |||||| ||||||| |   |||||||||||||||||||||||||||    
T  18610828 gagagagaaagttgtaaaaaagttgtcacaaaatagttgtacaaatatcatttctc 18610773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 2 - 57
Target Start/End: Original strand, 25239252 - 25239307
Alignment:
Q  2 agagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctca 57  Q
    |||||||| | ||| ||||||||  ||||||||| |||||||||||||||||||||    
T  25239252 agagagaaagctgtgcaaaagttgaacaaaaataattgtacaaatatcatttctca 25239307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 26501350 - 26501295
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    ||||||||| ||||| ||||||||||   ||||| |||||||||||||||||||||    
T  26501350 gagagagaaagttgtccaaaagttattacaaaatggttgtacaaatatcatttctc 26501295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 27352685 - 27352630
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    ||||||||| ||||| ||||||||||   ||||| |||||||||||||||||||||    
T  27352685 gagagagaaagttgtccaaaagttatcacaaaatggttgtacaaatatcatttctc 27352630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 2 - 57
Target Start/End: Complemental strand, 27578236 - 27578181
Alignment:
Q  2 agagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctca 57  Q
    |||||||| |||||||||||||| | | ||| || |||||||||||||||||||||    
T  27578236 agagagaaagttgtacaaaagttgtcccaaattaattgtacaaatatcatttctca 27578181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 29489375 - 29489430
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    ||||||||| ||||||| ||||||||   ||||| |||||||||||||||||||||    
T  29489375 gagagagaaagttgtaccaaagttatcacaaaatggttgtacaaatatcatttctc 29489430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 43457835 - 43457890
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    ||||||||| ||||| ||||||||||   ||||| |||||||||||||||||||||    
T  43457835 gagagagaaagttgtccaaaagttatcgcaaaatggttgtacaaatatcatttctc 43457890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 16 - 58
Target Start/End: Original strand, 11121623 - 11121665
Alignment:
Q  16 acaaaagttatacaaaaatagttgtacaaatatcatttctcat 58  Q
    ||||||||||||| ||||||||||| ||||||||||| |||||    
T  11121623 acaaaagttataccaaaatagttgttcaaatatcattgctcat 11121665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 11 - 57
Target Start/End: Complemental strand, 11796362 - 11796316
Alignment:
Q  11 gttgtacaaaagttatacaaaaatagttgtacaaatatcatttctca 57  Q
    ||||||||||| |||||| ||| || |||||||||||||||||||||    
T  11796362 gttgtacaaaaattataccaaattaattgtacaaatatcatttctca 11796316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 11897229 - 11897183
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaata 47  Q
    ||||||||| |||||||||||||| ||| ||||| ||||||||||||    
T  11897229 gagagagaaagttgtacaaaagttgtaccaaaatggttgtacaaata 11897183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 46281492 - 46281434
Alignment:
Q  1 gagagagaaggttgt-acaaaagttatacaaaaatagttgtacaaatatcatttctcat 58  Q
    ||||||||| ||||| |||||| ||||   |||||||||||||||||||||||||||||    
T  46281492 gagagagaaagttgtcacaaaaattattacaaaatagttgtacaaatatcatttctcat 46281434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 7645567 - 7645616
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatca 50  Q
    |||||| || |||||  ||||||| |||||||||||||||||||||||||    
T  7645567 gagagataaagttgtcaaaaagttgtacaaaaatagttgtacaaatatca 7645616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 47642622 - 47642679
Alignment:
Q  1 gagagagaaggttgt-acaaaagttatacaaaaatagttgtacaaatatcatttctca 57  Q
    ||||||||| ||||| |||||||||||  |||||| ||||| ||||||||||||||||    
T  47642622 gagagagaaagttgtcacaaaagttatcaaaaaatggttgttcaaatatcatttctca 47642679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 649824 - 649768
Alignment:
Q  1 gagagagaaggttgt-acaaaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    ||||||||| ||||| ||||||||| || |||||| ||||| |||||||||||||||    
T  649824 gagagagaaagttgtcacaaaagttgtaaaaaaatggttgttcaaatatcatttctc 649768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 4213128 - 4213072
Alignment:
Q  1 gagagagaaggttgt-acaaaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    ||||||||| ||||| |||||||||||  |||||| ||||| |||||||||||||||    
T  4213128 gagagagaaagttgtcacaaaagttatcaaaaaatggttgttcaaatatcatttctc 4213072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 26839435 - 26839383
Alignment:
Q  3 gagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttct 55  Q
    ||||||| ||||||||||||||||   ||||| |||||||||||| |||||||    
T  26839435 gagagaaagttgtacaaaagttatcataaaatggttgtacaaataccatttct 26839383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 29706718 - 29706774
Alignment:
Q  1 gagagagaaggttgta-caaaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    ||||||||||||| || ||||||||||   ||||| |||||||||||||||||||||    
T  29706718 gagagagaaggttataacaaaagttatcataaaatggttgtacaaatatcatttctc 29706774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 30631859 - 30631915
Alignment:
Q  1 gagagagaaggttgtacaaaagttat-acaaaaatagttgtacaaatatcatttctc 56  Q
    ||||||||| |||||  ||||||||| |||||||||| ||||||| |||||||||||    
T  30631859 gagagagaaagttgtcaaaaagttatcacaaaaatagatgtacaagtatcatttctc 30631915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 37619599 - 37619544
Alignment:
Q  1 gagagagaaggttgt-acaaaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    ||||||||| ||||| ||||||||||| ||||||| ||||| |||||||||||||||    
T  37619599 gagagagaaagttgtcacaaaagttat-caaaaatggttgtccaaatatcatttctc 37619544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 44161788 - 44161840
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcattt 53  Q
    |||||||||  |||| ||||| |||||| ||||||||| ||||||||||||||    
T  44161788 gagagagaaaattgtccaaaaattataccaaaatagttatacaaatatcattt 44161840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 48336455 - 48336506
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcattt 53  Q
    |||||||||| ||||||||||||| ||  ||||| ||||||||||||||||||    
T  48336455 gagagagaag-ttgtacaaaagttgtatcaaaatggttgtacaaatatcattt 48336506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 49615293 - 49615346
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    ||||||||||||||||||||| || |||   ||| |||||||||||||||||||||    
T  49615293 gagagagaaggttgtacaaaaattgtac--caatggttgtacaaatatcatttctc 49615346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 55
Target Start/End: Original strand, 50460735 - 50460771
Alignment:
Q  19 aaagttatacaaaaatagttgtacaaatatcatttct 55  Q
    |||||| ||||||||| ||||||||||||||||||||    
T  50460735 aaagttgtacaaaaatggttgtacaaatatcatttct 50460771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 50; Significance: 2e-19; HSPs: 50)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 18749379 - 18749436
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctcat 58  Q
    ||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||    
T  18749379 gagagagaaggttgtacaaaaattatacaaaaatggttgtacaaatatcatttctcat 18749436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 5852529 - 5852473
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctca 57  Q
    |||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||    
T  5852529 gagagagaaggttgtacaaaagttgtacaaaaatggttgtacaaatatcatttctca 5852473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 12256956 - 12256901
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||    
T  12256956 gagagagaaggttgtacaaaagttatacaaaaatgattgtacaaatatcatttctc 12256901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 44897681 - 44897623
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctcata 59  Q
    ||||||||||||||||| |||||| ||||||||| ||||||||||||||||||||||||    
T  44897681 gagagagaaggttgtacgaaagttgtacaaaaatggttgtacaaatatcatttctcata 44897623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 19637281 - 19637229
Alignment:
Q  4 agagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    |||||| |||||||||||||||||||||||| |||||||||||||||||||||    
T  19637281 agagaaagttgtacaaaagttatacaaaaatggttgtacaaatatcatttctc 19637229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 19835874 - 19835822
Alignment:
Q  4 agagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    |||||| |||||||||||||||||||||||| |||||||||||||||||||||    
T  19835874 agagaaagttgtacaaaagttatacaaaaatggttgtacaaatatcatttctc 19835822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 30340048 - 30339993
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    ||||||||| |||||||||||||| ||||||||| |||||||||||||||||||||    
T  30340048 gagagagaaagttgtacaaaagttgtacaaaaatggttgtacaaatatcatttctc 30339993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 34141497 - 34141442
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    |||||||||||||||||||||||| |||||||||  ||||||||||||||||||||    
T  34141497 gagagagaaggttgtacaaaagttgtacaaaaatgattgtacaaatatcatttctc 34141442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 6328722 - 6328664
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctcata 59  Q
    ||||||||| ||||||||||| |||||| ||||| ||||||||||||||||||||||||    
T  6328722 gagagagaaagttgtacaaaaattataccaaaatggttgtacaaatatcatttctcata 6328664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 11152715 - 11152770
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    ||||||||||||||||||||| ||||| ||||||  ||||||||||||||||||||    
T  11152715 gagagagaaggttgtacaaaaattatataaaaatgattgtacaaatatcatttctc 11152770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 26387875 - 26387930
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    ||||||||||||||||| |||||| ||||| ||| |||||||||||||||||||||    
T  26387875 gagagagaaggttgtacgaaagttgtacaagaatggttgtacaaatatcatttctc 26387930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 9384430 - 9384376
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttct 55  Q
    ||||||||| ||||||||||| ||||  |||||||||||||||||||||||||||    
T  9384430 gagagagaaagttgtacaaaaattatgtaaaaatagttgtacaaatatcatttct 9384376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 34373060 - 34373006
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttct 55  Q
    ||||||||| ||||||||||| |||||| ||||| ||||||||||||||||||||    
T  34373060 gagagagaaagttgtacaaaaattataccaaaatggttgtacaaatatcatttct 34373006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 12 - 57
Target Start/End: Complemental strand, 11126507 - 11126462
Alignment:
Q  12 ttgtacaaaagttatacaaaaatagttgtacaaatatcatttctca 57  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||||    
T  11126507 ttgtacaaaagttatgcaaaaatggttgtacaaatatcatttctca 11126462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 35705936 - 35705992
Alignment:
Q  4 agagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctcatacc 61  Q
    |||||| |||||| |||| |||||||||||| ||||||||||||||||||||||||||    
T  35705936 agagaaagttgtaaaaaa-ttatacaaaaatggttgtacaaatatcatttctcatacc 35705992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 12208494 - 12208442
Alignment:
Q  4 agagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    |||||| ||| |||||||||| ||||||||| |||||||||||||||||||||    
T  12208494 agagaaagttatacaaaagttgtacaaaaatggttgtacaaatatcatttctc 12208442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 17999801 - 17999749
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcattt 53  Q
    ||||||||| |||||||||||||| |||| |||| ||||||||||||||||||    
T  17999801 gagagagaaagttgtacaaaagttgtacacaaatggttgtacaaatatcattt 17999749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 27529581 - 27529529
Alignment:
Q  4 agagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    |||||| |||||||||||||| ||||||||| ||| |||||||||||||||||    
T  27529581 agagaaagttgtacaaaagttgtacaaaaatggttctacaaatatcatttctc 27529529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 28679183 - 28679131
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcattt 53  Q
    ||||||||| |||||||||||||| |||||||||  |||||||||||||||||    
T  28679183 gagagagaatgttgtacaaaagttgtacaaaaatgattgtacaaatatcattt 28679131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 38027631 - 38027683
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcattt 53  Q
    |||||||||||||||||||||||| |||||||||  |||||||| ||||||||    
T  38027631 gagagagaaggttgtacaaaagttgtacaaaaatgattgtacaagtatcattt 38027683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 2 - 53
Target Start/End: Original strand, 3366414 - 3366465
Alignment:
Q  2 agagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcattt 53  Q
    ||||||||||||||||||||||| ||  ||||||| ||||||||||||||||    
T  3366414 agagagaaggttgtacaaaagttgtaataaaatagatgtacaaatatcattt 3366465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 4 - 59
Target Start/End: Complemental strand, 33559691 - 33559636
Alignment:
Q  4 agagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctcata 59  Q
    |||||| ||||| ||||| |||||| ||||| ||||||||||||||||||||||||    
T  33559691 agagaaagttgtccaaaaattatactaaaatggttgtacaaatatcatttctcata 33559636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 6 - 57
Target Start/End: Original strand, 35203770 - 35203821
Alignment:
Q  6 agaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctca 57  Q
    |||| ||||||||||||||  |||||||| ||||||||||||||||||||||    
T  35203770 agaaagttgtacaaaagttgaacaaaaatggttgtacaaatatcatttctca 35203821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 4 - 59
Target Start/End: Original strand, 36763543 - 36763597
Alignment:
Q  4 agagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctcata 59  Q
    |||||| |||||| ||||||||| |||||| |||||||||||||||||||||||||    
T  36763543 agagaaagttgtataaaagttat-caaaaaaagttgtacaaatatcatttctcata 36763597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 40721826 - 40721771
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    ||||||||| |||||||||||||| ||| ||||| | |||||||||||||||||||    
T  40721826 gagagagaaagttgtacaaaagttgtaccaaaatggctgtacaaatatcatttctc 40721771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 2 - 56
Target Start/End: Complemental strand, 29893664 - 29893610
Alignment:
Q  2 agagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    |||||||| ||||||||||||||||   ||| |||||||||||||||||||||||    
T  29893664 agagagaaagttgtacaaaagttatcacaaattagttgtacaaatatcatttctc 29893610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 15 - 56
Target Start/End: Complemental strand, 3839451 - 3839410
Alignment:
Q  15 tacaaaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    |||||||||||||| ||||| |||||||||||||||||||||    
T  3839451 tacaaaagttataccaaaatggttgtacaaatatcatttctc 3839410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 11728140 - 11728193
Alignment:
Q  4 agagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctca 57  Q
    |||||| |||||||||||||| ||| ||||| |||||||||| |||||||||||    
T  11728140 agagaaagttgtacaaaagttgtaccaaaatggttgtacaaacatcatttctca 11728193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 23 - 56
Target Start/End: Complemental strand, 40115559 - 40115526
Alignment:
Q  23 ttatacaaaaatagttgtacaaatatcatttctc 56  Q
    ||||||||||||||||||||||||||||||||||    
T  40115559 ttatacaaaaatagttgtacaaatatcatttctc 40115526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 25094407 - 25094351
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctca 57  Q
    ||||||||| ||||||||||| || ||| ||||| ||| ||||||||||||||||||    
T  25094407 gagagagaaagttgtacaaaaattgtaccaaaatggttatacaaatatcatttctca 25094351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 19 - 59
Target Start/End: Original strand, 27538939 - 27538979
Alignment:
Q  19 aaagttatacaaaaatagttgtacaaatatcatttctcata 59  Q
    |||||| ||||||||| ||||||||||||||||||||||||    
T  27538939 aaagttgtacaaaaatggttgtacaaatatcatttctcata 27538979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 36719209 - 36719153
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaa-tatcatttctc 56  Q
    ||||||||| ||||| ||||| |||||| |||||||||||||||| |||||||||||    
T  36719209 gagagagaaagttgttcaaaatttataccaaaatagttgtacaaagtatcatttctc 36719153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 38021411 - 38021355
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctca 57  Q
    |||| |||| |||||  |||| |||||| ||||||||||||||||||||||||||||    
T  38021411 gagaaagaaagttgtcaaaaaattatactaaaatagttgtacaaatatcatttctca 38021355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 57
Target Start/End: Original strand, 305991 - 306030
Alignment:
Q  18 aaaagttatacaaaaatagttgtacaaatatcatttctca 57  Q
    ||||||||||||||||| |||||| |||||||||||||||    
T  305991 aaaagttatacaaaaatggttgtaaaaatatcatttctca 306030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 4114437 - 4114492
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    ||||||||| ||| |||||||||||||  ||||| ||||||||||||| |||||||    
T  4114437 gagagagaaagttatacaaaagttataataaaatggttgtacaaatataatttctc 4114492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 6884965 - 6884910
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    ||||||||| |||||| |||||||||   ||| |||||||||||||||||||||||    
T  6884965 gagagagaaagttgtataaaagttatcacaaattagttgtacaaatatcatttctc 6884910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 8352890 - 8352835
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    |||||||||  ||||  |||||||||  ||||||||||||||||||||||||||||    
T  8352890 gagagagaaaattgtctaaaagttattaaaaaatagttgtacaaatatcatttctc 8352835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 20247883 - 20247938
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    ||||||||| |||||||||||||  ||| ||||||||| ||||||||| |||||||    
T  20247883 gagagagaaagttgtacaaaagtcgtaccaaaatagttatacaaatattatttctc 20247938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 29168780 - 29168725
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    ||||||||| ||||| |||||||| |  |||||| |||||||||||||||||||||    
T  29168780 gagagagaaagttgtgcaaaagttgtcaaaaaatggttgtacaaatatcatttctc 29168725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 11 - 57
Target Start/End: Complemental strand, 22303248 - 22303202
Alignment:
Q  11 gttgtacaaaagttatacaaaaatagttgtacaaatatcatttctca 57  Q
    ||||| |||||||| |  |||||||||||||||||||||||||||||    
T  22303248 gttgttcaaaagttgtcaaaaaatagttgtacaaatatcatttctca 22303202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 40210083 - 40210141
Alignment:
Q  1 gagagagaaggttgt-acaaaagttatacaaaaatagttgtacaaatatcatttctcat 58  Q
    ||||||||| ||||| |||||| ||||  |||||||||||| |||||||||||||||||    
T  40210083 gagagagaaagttgtcacaaaaattatttaaaaatagttgttcaaatatcatttctcat 40210141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 43621964 - 43622022
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctcata 59  Q
    ||||||||| ||||| |||||||| |   ||||||||||||||||||||||| ||||||    
T  43621964 gagagagaaagttgttcaaaagttgtcataaaatagttgtacaaatatcattactcata 43622022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 13850200 - 13850257
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctcat 58  Q
    ||||||||| ||||||||||| |||||  |||||  ||||| ||||||||||||||||    
T  13850200 gagagagaaagttgtacaaaaattatatcaaaatgattgtataaatatcatttctcat 13850257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 4858165 - 4858113
Alignment:
Q  4 agagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    |||||| ||| ||||||| |||||| ||||||||| |||| ||||||||||||    
T  4858165 agagaaagttatacaaaaattataccaaaatagttatacagatatcatttctc 4858113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 12784414 - 12784474
Alignment:
Q  1 gagagagaaggttgt-acaaaagttatacaaaaatagttgtacaaatatcatttctcatac 60  Q
    ||||||||| ||||| |||||| ||||   ||||| |||||||||||||||||||||||||    
T  12784414 gagagagaaagttgtcacaaaaattattataaaatggttgtacaaatatcatttctcatac 12784474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 16 - 56
Target Start/End: Complemental strand, 24766192 - 24766152
Alignment:
Q  16 acaaaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    |||||||||||  |||||| |||||||||||||||||||||    
T  24766192 acaaaagttattaaaaaatggttgtacaaatatcatttctc 24766152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 36376865 - 36376921
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctca 57  Q
    ||||||||| |||||  ||| ||| ||||||| | ||||||||||||||||||||||    
T  36376865 gagagagaaagttgtcaaaatgttgtacaaaagtggttgtacaaatatcatttctca 36376921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 15 - 55
Target Start/End: Complemental strand, 37076698 - 37076658
Alignment:
Q  15 tacaaaagttatacaaaaatagttgtacaaatatcatttct 55  Q
    ||||||| ||||| ||||||| |||||||||||||||||||    
T  37076698 tacaaaaattatataaaaataattgtacaaatatcatttct 37076658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 15 - 55
Target Start/End: Complemental strand, 39147806 - 39147766
Alignment:
Q  15 tacaaaagttatacaaaaatagttgtacaaatatcatttct 55  Q
    |||||||||| || |||||||||||||||| ||||||||||    
T  39147806 tacaaaagttgtaaaaaaatagttgtacaagtatcatttct 39147766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 41157017 - 41157069
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcattt 53  Q
    ||||||||| ||||||||||  ||||||||||||  || ||||||||||||||    
T  41157017 gagagagaaagttgtacaaatattatacaaaaatgattatacaaatatcattt 41157069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 48; Significance: 3e-18; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 27704490 - 27704435
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  27704490 gagatagaaggttgtacaaaagttgtacaaaaatagttgtacaaatatcatttctc 27704435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 48639399 - 48639454
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  48639399 gagagagaaggttgtacaaaagttgtacaaaaatggttgtacaaatatcatttctc 48639454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 17039212 - 17039158
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttct 55  Q
    ||||||||| ||||||||||| |||||||||||||||||||||||||||||||||    
T  17039212 gagagagaaagttgtacaaaaattatacaaaaatagttgtacaaatatcatttct 17039158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 28548237 - 28548292
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    ||||||||| |||||||||||||| ||| |||||||||||||||||||||||||||    
T  28548237 gagagagaaagttgtacaaaagttgtaccaaaatagttgtacaaatatcatttctc 28548292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 41538537 - 41538482
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    ||||||||||||||||||||| || ||||||||| |||||||||||||||||||||    
T  41538537 gagagagaaggttgtacaaaaattgtacaaaaatggttgtacaaatatcatttctc 41538482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 41910201 - 41910252
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatt 52  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  41910201 gagagagaaggttgtacaaaagttgtacaaaaatggttgtacaaatatcatt 41910252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 45335917 - 45335859
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctcata 59  Q
    ||||||||| |||||||||||||| ||||||||| |||||||||||||||||| |||||    
T  45335917 gagagagaaagttgtacaaaagttgtacaaaaatggttgtacaaatatcatttttcata 45335859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 47945038 - 47944981
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatag-ttgtacaaatatcatttctca 57  Q
    |||||||||||||||||||||||| ||||||||| | |||||||||||||||||||||    
T  47945038 gagagagaaggttgtacaaaagttgtacaaaaatggtttgtacaaatatcatttctca 47944981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 47950468 - 47950411
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatag-ttgtacaaatatcatttctca 57  Q
    |||||||||||||||||||||||| ||||||||| | |||||||||||||||||||||    
T  47950468 gagagagaaggttgtacaaaagttgtacaaaaatggtttgtacaaatatcatttctca 47950411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 11070280 - 11070228
Alignment:
Q  4 agagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    |||||| |||||||||||||||||| ||||| |||||||||||||||||||||    
T  11070280 agagaaagttgtacaaaagttatactaaaatggttgtacaaatatcatttctc 11070228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 30538681 - 30538625
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctca 57  Q
    ||||||||| |||||||||||||| ||| ||||| ||||||||||||||||||||||    
T  30538681 gagagagaaagttgtacaaaagttgtaccaaaattgttgtacaaatatcatttctca 30538625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 37969986 - 37969930
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctca 57  Q
    ||||||||| |||||||||||||| ||  ||||||||||||||||||||||||||||    
T  37969986 gagagagaaagttgtacaaaagttgtatcaaaatagttgtacaaatatcatttctca 37969930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 15 - 58
Target Start/End: Original strand, 40207830 - 40207873
Alignment:
Q  15 tacaaaagttatacaaaaatagttgtacaaatatcatttctcat 58  Q
    |||||||||| |||||||||||||||||||||||||||||||||    
T  40207830 tacaaaagttgtacaaaaatagttgtacaaatatcatttctcat 40207873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 2600550 - 2600607
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctcat 58  Q
    |||||| || |||||||||||||| ||| ||||| |||||||||||||||||||||||    
T  2600550 gagagaaaaagttgtacaaaagttgtactaaaatggttgtacaaatatcatttctcat 2600607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 640447 - 640395
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcattt 53  Q
    ||||||||| ||||||||||| || ||||||||| ||||||||||||||||||    
T  640447 gagagagaaagttgtacaaaaattgtacaaaaatggttgtacaaatatcattt 640395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 11789707 - 11789763
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctca 57  Q
    |||||| || |||||||||||||| ||| ||||| ||||||||||||||||||||||    
T  11789707 gagagacaaagttgtacaaaagttgtactaaaatggttgtacaaatatcatttctca 11789763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 12 - 56
Target Start/End: Original strand, 33341152 - 33341196
Alignment:
Q  12 ttgtacaaaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    ||||||||||||||||| ||||| |||||||||||||||||||||    
T  33341152 ttgtacaaaagttatactaaaattgttgtacaaatatcatttctc 33341196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 37385249 - 37385301
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcattt 53  Q
    ||||||||| |||||||||||||| |  |||||||||||||||||||||||||    
T  37385249 gagagagaaagttgtacaaaagttgtcaaaaaatagttgtacaaatatcattt 37385301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 39415473 - 39415418
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    ||||||||| |||||||| |||||| |||||||| |||||||||||| ||||||||    
T  39415473 gagagagaaagttgtacataagttaaacaaaaattgttgtacaaataacatttctc 39415418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 55
Target Start/End: Original strand, 23034337 - 23034383
Alignment:
Q  9 aggttgtacaaaagttatacaaaaatagttgtacaaatatcatttct 55  Q
    ||||||||||||| || ||||||||| ||||||||||||||||||||    
T  23034337 aggttgtacaaaaattgtacaaaaatggttgtacaaatatcatttct 23034383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 33050238 - 33050181
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctcat 58  Q
    ||||||||| |||||||||||||| |   ||||| |||||||||||||||||||||||    
T  33050238 gagagagaaagttgtacaaaagttgtcacaaaatggttgtacaaatatcatttctcat 33050181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 19 - 59
Target Start/End: Complemental strand, 25272639 - 25272599
Alignment:
Q  19 aaagttatacaaaaatagttgtacaaatatcatttctcata 59  Q
    |||||| ||||||||| ||||||||||||||||||||||||    
T  25272639 aaagttgtacaaaaatggttgtacaaatatcatttctcata 25272599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 29763885 - 29763829
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctca 57  Q
    |||| |||| ||||||||||||||||   ||||| ||||||||||||||||||||||    
T  29763885 gagaaagaaagttgtacaaaagttatcacaaaatggttgtacaaatatcatttctca 29763829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 41458916 - 41458972
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctca 57  Q
    ||||||||| ||||||||||| || ||| ||||| ||||||||||||| ||||||||    
T  41458916 gagagagaaagttgtacaaaaattgtactaaaatggttgtacaaatattatttctca 41458972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 5378682 - 5378627
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    ||||||||| |||||  ||||||| || |||||| |||||||||||||||||||||    
T  5378682 gagagagaaagttgtcaaaaagttgtataaaaatggttgtacaaatatcatttctc 5378627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 58
Target Start/End: Original strand, 27866560 - 27866599
Alignment:
Q  19 aaagttatacaaaaatagttgtacaaatatcatttctcat 58  Q
    |||||| ||||||||| |||||||||||||||||||||||    
T  27866560 aaagttgtacaaaaatggttgtacaaatatcatttctcat 27866599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 35491427 - 35491482
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    |||||||||  ||||||||||||| |||| |||| ||| |||||||||||||||||    
T  35491427 gagagagaaaattgtacaaaagttgtacataaatggttatacaaatatcatttctc 35491482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 40693544 - 40693599
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    ||||||||| |||||  ||||||| |  ||||||||||||||||||||||||||||    
T  40693544 gagagagaaagttgtctaaaagttgtcaaaaaatagttgtacaaatatcatttctc 40693599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 42060711 - 42060656
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    ||||||||| |||||  ||||||||||  ||||| |||||||||||||||||||||    
T  42060711 gagagagaaagttgtcaaaaagttatagcaaaatggttgtacaaatatcatttctc 42060656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 48522211 - 48522156
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    |||||| || |||||  ||||||| ||||||||| |||||||||||||||||||||    
T  48522211 gagagaaaaagttgtctaaaagttgtacaaaaatggttgtacaaatatcatttctc 48522156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 34349043 - 34349097
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttct 55  Q
    |||||||||  ||||  ||||||| ||||||||| ||||||||||||||||||||    
T  34349043 gagagagaaaattgtcaaaaagttgtacaaaaatggttgtacaaatatcatttct 34349097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 35212971 - 35213025
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttct 55  Q
    ||||||||| ||||||||||| || ||  |||||| |||||||||||||||||||    
T  35212971 gagagagaaagttgtacaaaaattgtagcaaaataattgtacaaatatcatttct 35213025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 30 - 59
Target Start/End: Original strand, 1814352 - 1814381
Alignment:
Q  30 aaaatagttgtacaaatatcatttctcata 59  Q
    ||||||||||||||||||||||||||||||    
T  1814352 aaaatagttgtacaaatatcatttctcata 1814381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 2347075 - 2347132
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctcat 58  Q
    ||||||||| ||||||| |||||| |   ||||| |||||||||||||||||||||||    
T  2347075 gagagagaaagttgtaccaaagttgtcacaaaatggttgtacaaatatcatttctcat 2347132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 25614840 - 25614893
Alignment:
Q  4 agagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctca 57  Q
    |||||| ||||| ||||||||||  |||||| | ||||||||||||||||||||    
T  25614840 agagaaagttgtgcaaaagttatcaaaaaatggatgtacaaatatcatttctca 25614893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 30 - 59
Target Start/End: Complemental strand, 26153672 - 26153643
Alignment:
Q  30 aaaatagttgtacaaatatcatttctcata 59  Q
    ||||||||||||||||||||||||||||||    
T  26153672 aaaatagttgtacaaatatcatttctcata 26153643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 32529870 - 32529922
Alignment:
Q  1 gagagagaaggttgt-acaaaagttatacaaaaatagttgtacaaatatcattt 53  Q
    ||||||||| ||||| |||||||||||| |||||||||||| ||||||||||||    
T  32529870 gagagagaaagttgttacaaaagttata-aaaaatagttgttcaaatatcattt 32529922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 26 - 59
Target Start/End: Original strand, 33465069 - 33465102
Alignment:
Q  26 tacaaaaatagttgtacaaatatcatttctcata 59  Q
    ||||||||| ||||||||||||||||||||||||    
T  33465069 tacaaaaatggttgtacaaatatcatttctcata 33465102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 58
Target Start/End: Original strand, 42598252 - 42598281
Alignment:
Q  29 aaaaatagttgtacaaatatcatttctcat 58  Q
    ||||||||||||||||||||||||||||||    
T  42598252 aaaaatagttgtacaaatatcatttctcat 42598281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 31 - 59
Target Start/End: Complemental strand, 36580765 - 36580737
Alignment:
Q  31 aaatagttgtacaaatatcatttctcata 59  Q
    |||||||||||||||||||||||||||||    
T  36580765 aaatagttgtacaaatatcatttctcata 36580737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 59
Target Start/End: Original strand, 37848643 - 37848683
Alignment:
Q  19 aaagttatacaaaaatagttgtacaaatatcatttctcata 59  Q
    |||||| |||||||||  |||||||||||||||||||||||    
T  37848643 aaagttgtacaaaaatgattgtacaaatatcatttctcata 37848683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 16 - 56
Target Start/End: Complemental strand, 41018703 - 41018663
Alignment:
Q  16 acaaaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    ||||||||| | ||||||||||||| |||||||||||||||    
T  41018703 acaaaagttgtccaaaaatagttgttcaaatatcatttctc 41018663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 44175600 - 44175544
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctca 57  Q
    ||||||||| ||||||||||||||||   |||||  |||||||||||| ||||||||    
T  44175600 gagagagaaagttgtacaaaagttatcacaaaatgattgtacaaatattatttctca 44175544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 28 - 56
Target Start/End: Original strand, 45154582 - 45154610
Alignment:
Q  28 caaaaatagttgtacaaatatcatttctc 56  Q
    |||||||||||||||||||||||||||||    
T  45154582 caaaaatagttgtacaaatatcatttctc 45154610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 48; Significance: 3e-18; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 39032620 - 39032675
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  39032620 gagagagaaggttgtacaaaagttgtacaaaaatggttgtacaaatatcatttctc 39032675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 18729308 - 18729360
Alignment:
Q  4 agagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    ||||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  18729308 agagaaggttgtacaaaagttgtacaaaaatggttgtacaaatatcatttctc 18729360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 20985545 - 20985600
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    ||||||||| ||||||||||| |||||||||||| |||||||||||||||||||||    
T  20985545 gagagagaaagttgtacaaaaattatacaaaaatggttgtacaaatatcatttctc 20985600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 3031886 - 3031834
Alignment:
Q  4 agagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    |||||| |||||||||||||| ||||||||| |||||||||||||||||||||    
T  3031886 agagaaagttgtacaaaagttgtacaaaaatggttgtacaaatatcatttctc 3031834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 12891112 - 12891167
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    ||||||||| |||||||||||||| | ||||||| |||||||||||||||||||||    
T  12891112 gagagagaatgttgtacaaaagttgtgcaaaaatggttgtacaaatatcatttctc 12891167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 24329998 - 24330053
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    ||||||||| |||||||||||||| ||| |||||| ||||||||||||||||||||    
T  24329998 gagagagaaagttgtacaaaagttgtaccaaaataattgtacaaatatcatttctc 24330053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 25585472 - 25585527
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    |||||||||  ||||||||||||| ||||||||| |||||||||||||||||||||    
T  25585472 gagagagaaatttgtacaaaagttgtacaaaaatggttgtacaaatatcatttctc 25585527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 29765885 - 29765830
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    ||||||||| |||||||||||||| ||| ||||| |||||||||||||||||||||    
T  29765885 gagagagaaagttgtacaaaagttgtactaaaatggttgtacaaatatcatttctc 29765830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 34693232 - 34693287
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    |||||||||| |||||||||| ||||||||||||  ||||||||||||||||||||    
T  34693232 gagagagaagattgtacaaaaattatacaaaaatgattgtacaaatatcatttctc 34693287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 35616815 - 35616869
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttct 55  Q
    ||||||||| |||||| ||||||||||| ||||||||||| ||||||||||||||    
T  35616815 gagagagaaagttgtataaaagttataccaaaatagttgtgcaaatatcatttct 35616869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 2 - 55
Target Start/End: Original strand, 37821142 - 37821195
Alignment:
Q  2 agagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttct 55  Q
    ||||||||||||||||||||||| || |||||| ||||||| ||||||||||||    
T  37821142 agagagaaggttgtacaaaagttgtataaaaatggttgtacgaatatcatttct 37821195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 3154659 - 3154710
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatt 52  Q
    ||||||||| ||||||||||||||||   |||||||||||||||||||||||    
T  3154659 gagagagaaagttgtacaaaagttatcataaaatagttgtacaaatatcatt 3154710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 14522980 - 14523035
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    |||||||||  ||||| ||||||| ||||||||| |||||||||||||||||||||    
T  14522980 gagagagaaaattgtaaaaaagttgtacaaaaatggttgtacaaatatcatttctc 14523035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 1108036 - 1107978
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctcata 59  Q
    |||||| || |||||||||||||| ||  |||||||| |||||||||||||||||||||    
T  1108036 gagagataaagttgtacaaaagttgtaacaaaatagtcgtacaaatatcatttctcata 1107978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 30103467 - 30103521
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttct 55  Q
    |||||||||  |||||||||| ||||||||||||  |||||||||||||||||||    
T  30103467 gagagagaaaattgtacaaaaattatacaaaaatgattgtacaaatatcatttct 30103521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 2 - 56
Target Start/End: Complemental strand, 35578914 - 35578860
Alignment:
Q  2 agagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    ||||||||||||||||||||||| |||||||||| || || |||||||| |||||    
T  35578914 agagagaaggttgtacaaaagttgtacaaaaataattatataaatatcacttctc 35578860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 16 - 57
Target Start/End: Complemental strand, 31748376 - 31748335
Alignment:
Q  16 acaaaagttatacaaaaatagttgtacaaatatcatttctca 57  Q
    ||||||||| || |||||||||||||||||||||||||||||    
T  31748376 acaaaagttgtaaaaaaatagttgtacaaatatcatttctca 31748335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 36899497 - 36899553
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctcat 58  Q
    ||||||||||||||||||||| ||||||||||||   |||| ||||||||||||||||    
T  36899497 gagagagaaggttgtacaaaa-ttatacaaaaatgactgtataaatatcatttctcat 36899553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 19 - 56
Target Start/End: Complemental strand, 38919900 - 38919863
Alignment:
Q  19 aaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    |||||| |||||||||||||||||||||||||||||||    
T  38919900 aaagttgtacaaaaatagttgtacaaatatcatttctc 38919863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 19 - 59
Target Start/End: Complemental strand, 8442207 - 8442167
Alignment:
Q  19 aaagttatacaaaaatagttgtacaaatatcatttctcata 59  Q
    |||||| |||||||||| |||||||||||||||||||||||    
T  8442207 aaagttgtacaaaaataattgtacaaatatcatttctcata 8442167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 16 - 56
Target Start/End: Original strand, 19844340 - 19844380
Alignment:
Q  16 acaaaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    |||||||||||  ||||||||||||||||||||||||||||    
T  19844340 acaaaagttatcaaaaaatagttgtacaaatatcatttctc 19844380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 27005495 - 27005550
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    |||||| || ||||||||||| ||||  ||||||| ||||||||||||||||||||    
T  27005495 gagagataaagttgtacaaaaattatcaaaaaataattgtacaaatatcatttctc 27005550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 29803280 - 29803225
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    ||||||||| |||||  ||||||| |  ||||||||||||||||||||||||||||    
T  29803280 gagagagaaagttgtttaaaagttgtcaaaaaatagttgtacaaatatcatttctc 29803225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 56
Target Start/End: Complemental strand, 2863604 - 2863550
Alignment:
Q  2 agagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    ||||||||  |||||||||||||||| |||||| ||||| ||||||||| |||||    
T  2863604 agagagaaaattgtacaaaagttatataaaaatggttgttcaaatatcaattctc 2863550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 4820210 - 4820152
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctcata 59  Q
    |||||||||||||||||||||| | |   ||||| | ||||||||||||||||||||||    
T  4820210 gagagagaaggttgtacaaaagatgtcataaaatggatgtacaaatatcatttctcata 4820152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 29 - 59
Target Start/End: Complemental strand, 26627357 - 26627327
Alignment:
Q  29 aaaaatagttgtacaaatatcatttctcata 59  Q
    |||||||||||||||||||||||||||||||    
T  26627357 aaaaatagttgtacaaatatcatttctcata 26627327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 33893641 - 33893587
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttct 55  Q
    ||||||||| ||| |||| ||||| ||||||||||||| ||||||||| ||||||    
T  33893641 gagagagaaagttatacagaagttgtacaaaaatagttatacaaatattatttct 33893587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 57
Target Start/End: Complemental strand, 38387647 - 38387609
Alignment:
Q  19 aaagttatacaaaaatagttgtacaaatatcatttctca 57  Q
    |||||| ||||||||| ||||||||||||||||||||||    
T  38387647 aaagttgtacaaaaatggttgtacaaatatcatttctca 38387609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 41175721 - 41175779
Alignment:
Q  1 gagagagaaggttgt-acaaaagttatacaaaaatagttgtacaaatatcatttctcat 58  Q
    ||||||||| ||||| ||||||||||| | ||||||| ||| |||||||||||||||||    
T  41175721 gagagagaaagttgtcacaaaagttatcccaaaatagatgttcaaatatcatttctcat 41175779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 56
Target Start/End: Original strand, 9957224 - 9957261
Alignment:
Q  19 aaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    |||||| |||||||||| ||||||||||||||||||||    
T  9957224 aaagttctacaaaaataattgtacaaatatcatttctc 9957261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 56
Target Start/End: Complemental strand, 12203195 - 12203158
Alignment:
Q  19 aaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    |||||| ||||||||| |||||||||||||||||||||    
T  12203195 aaagttgtacaaaaatggttgtacaaatatcatttctc 12203158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 30420681 - 30420624
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctcat 58  Q
    |||||||||| |||||||||| ||||   ||||| | |||||||||||||||||||||    
T  30420681 gagagagaagattgtacaaaaattatcataaaatggatgtacaaatatcatttctcat 30420624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 30574393 - 30574450
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctcat 58  Q
    ||||||||| |||||||||||||| |   ||| | |||||||||||||||||||||||    
T  30574393 gagagagaaagttgtacaaaagttgtcacaaattggttgtacaaatatcatttctcat 30574450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 31626102 - 31626147
Alignment:
Q  11 gttgtacaaaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    ||||||||||| |||||| |||||  ||||||||||||||||||||    
T  31626102 gttgtacaaaaattataccaaaatgattgtacaaatatcatttctc 31626147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 30 - 59
Target Start/End: Complemental strand, 34698806 - 34698777
Alignment:
Q  30 aaaatagttgtacaaatatcatttctcata 59  Q
    ||||||||||||||||||||||||||||||    
T  34698806 aaaatagttgtacaaatatcatttctcata 34698777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 58
Target Start/End: Original strand, 40584248 - 40584289
Alignment:
Q  17 caaaagttatacaaaaatagttgtacaaatatcatttctcat 58  Q
    |||||||| || ||||||||||||| ||||||||||||||||    
T  40584248 caaaagttgtaaaaaaatagttgtagaaatatcatttctcat 40584289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 56
Target Start/End: Original strand, 43153083 - 43153120
Alignment:
Q  19 aaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    |||||| ||||||||| |||||||||||||||||||||    
T  43153083 aaagttgtacaaaaattgttgtacaaatatcatttctc 43153120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 2629874 - 2629818
Alignment:
Q  1 gagagagaaggttgta-caaaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    |||||||||||||||  |||||||| |  |||||| |||||||||||||||||||||    
T  2629874 gagagagaaggttgtttcaaaagttgtcaaaaaatggttgtacaaatatcatttctc 2629818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 9599744 - 9599800
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctca 57  Q
    ||||||||| |||||||||||||| |   ||| | ||||||||||||||||||||||    
T  9599744 gagagagaaagttgtacaaaagttgtcacaaattggttgtacaaatatcatttctca 9599800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 11954487 - 11954431
Alignment:
Q  1 gagagagaaggttgt-acaaaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    ||||||||| ||||| |||||| ||||| || ||||||||| |||||||||||||||    
T  11954487 gagagagaaagttgtcacaaaaattataaaacaatagttgttcaaatatcatttctc 11954431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 30 - 58
Target Start/End: Original strand, 14070660 - 14070688
Alignment:
Q  30 aaaatagttgtacaaatatcatttctcat 58  Q
    |||||||||||||||||||||||||||||    
T  14070660 aaaatagttgtacaaatatcatttctcat 14070688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 150 - 190
Target Start/End: Original strand, 22796851 - 22796891
Alignment:
Q  150 aatacacagttgagaagttgttaaaggtaagatttttcatt 190  Q
    |||||||||||||||  | ||||||||||||||||||||||    
T  22796851 aatacacagttgagagatggttaaaggtaagatttttcatt 22796891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 31006114 - 31006058
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctca 57  Q
    ||||||||| |||||  ||||||| ||  |||||||| |||||||||||||||||||    
T  31006114 gagagagaaagttgtcaaaaagttttagcaaaatagtcgtacaaatatcatttctca 31006058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 48; Significance: 3e-18; HSPs: 57)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 36110189 - 36110134
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    ||||||||||||||||||||| || |||||||||||||||||||||||||||||||    
T  36110189 gagagagaaggttgtacaaaaattgtacaaaaatagttgtacaaatatcatttctc 36110134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 48650272 - 48650327
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    ||||||||| |||||||||||||| |||||||||||||||||||||| ||||||||    
T  48650272 gagagagaaagttgtacaaaagttttacaaaaatagttgtacaaataacatttctc 48650327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 29863603 - 29863551
Alignment:
Q  4 agagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    |||||| |||||||||||||||||| ||||| |||||||||||||||||||||    
T  29863603 agagaaagttgtacaaaagttataccaaaatggttgtacaaatatcatttctc 29863551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 29577452 - 29577507
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    |||| |||| ||||||||||| || |||||||||||||||||||||||||||||||    
T  29577452 gagaaagaaagttgtacaaaaattgtacaaaaatagttgtacaaatatcatttctc 29577507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 50291337 - 50291282
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    |||||||||||||||| ||||||| |||||||||  ||||||||||||||||||||    
T  50291337 gagagagaaggttgtataaaagttgtacaaaaatgattgtacaaatatcatttctc 50291282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 38960676 - 38960730
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttct 55  Q
    |||||||||||||||| |||| || ||||||||| ||||||||||||||||||||    
T  38960676 gagagagaaggttgtataaaaattgtacaaaaatggttgtacaaatatcatttct 38960730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 55960755 - 55960698
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctcat 58  Q
    |||||||||  ||||||||||||||||| ||||| ||| |||||||||||||||||||    
T  55960755 gagagagaaaattgtacaaaagttataccaaaatggttatacaaatatcatttctcat 55960698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 4878022 - 4877966
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgt-acaaatatcatttctc 56  Q
    |||||||||||||||||||||||| ||||||||| ||||| | ||||||||||||||    
T  4878022 gagagagaaggttgtacaaaagttgtacaaaaatggttgtaaaaaatatcatttctc 4877966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 8 - 56
Target Start/End: Original strand, 23133560 - 23133608
Alignment:
Q  8 aaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    ||||||||||||||||| ||||||||| ||||||||||||| |||||||    
T  23133560 aaggttgtacaaaagttgtacaaaaatggttgtacaaatataatttctc 23133608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 1987729 - 1987784
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    ||||||||| ||||||||||| || ||| ||||| |||||||||||||||||||||    
T  1987729 gagagagaaagttgtacaaaaattgtactaaaatggttgtacaaatatcatttctc 1987784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 4577612 - 4577557
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    ||||||||| ||||||||||| || ||| ||||| |||||||||||||||||||||    
T  4577612 gagagagaaagttgtacaaaaattgtacgaaaatggttgtacaaatatcatttctc 4577557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 31318808 - 31318753
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    ||||||||| ||||||||||| || ||| ||||| |||||||||||||||||||||    
T  31318808 gagagagaaagttgtacaaaaattgtaccaaaatggttgtacaaatatcatttctc 31318753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 4 - 59
Target Start/End: Complemental strand, 32901381 - 32901326
Alignment:
Q  4 agagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctcata 59  Q
    |||||| ||||| ||||| ||||  |||||||||||||||||||||||||||||||    
T  32901381 agagaaagttgtgcaaaaattatcaaaaaatagttgtacaaatatcatttctcata 32901326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 19 - 58
Target Start/End: Original strand, 36871191 - 36871230
Alignment:
Q  19 aaagttatacaaaaatagttgtacaaatatcatttctcat 58  Q
    |||||| |||||||||||||||||||||||||||||||||    
T  36871191 aaagttgtacaaaaatagttgtacaaatatcatttctcat 36871230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 11 - 54
Target Start/End: Original strand, 43307395 - 43307438
Alignment:
Q  11 gttgtacaaaagttatacaaaaatagttgtacaaatatcatttc 54  Q
    |||||||||||||| ||||||||| |||||||||||||||||||    
T  43307395 gttgtacaaaagttgtacaaaaatggttgtacaaatatcatttc 43307438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 17 - 56
Target Start/End: Original strand, 43511679 - 43511718
Alignment:
Q  17 caaaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  43511679 caaaagttgtacaaaaatagttgtacaaatatcatttctc 43511718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 46355309 - 46355364
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    ||||||||| |||||| ||||||| ||||||| | |||||||||||||||||||||    
T  46355309 gagagagaatgttgtataaaagttgtacaaaagtggttgtacaaatatcatttctc 46355364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 51107457 - 51107512
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    ||||||||| ||||| ||||| ||||||||||||  ||||||||||||||||||||    
T  51107457 gagagagaaagttgtgcaaaaattatacaaaaatgattgtacaaatatcatttctc 51107512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 54803344 - 54803399
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    ||||||||| ||||||||||| ||  || |||||||||||||||||||||||||||    
T  54803344 gagagagaaagttgtacaaaaattgcaccaaaatagttgtacaaatatcatttctc 54803399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 36947108 - 36947166
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctcata 59  Q
    ||||||||| ||| ||||||| |  ||| ||||||||||||||||||||||||||||||    
T  36947108 gagagagaaagttatacaaaaatattaccaaaatagttgtacaaatatcatttctcata 36947166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 56
Target Start/End: Original strand, 48791630 - 48791668
Alignment:
Q  18 aaaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  48791630 aaaaattatacaaaaatagttgtacaaatatcatttctc 48791668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 3475924 - 3475867
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctcat 58  Q
    ||||||||| |||||||||||||| |   ||||| |||||||||||||||||||||||    
T  3475924 gagagagaaagttgtacaaaagttgtcataaaatggttgtacaaatatcatttctcat 3475867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 4949250 - 4949307
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctcat 58  Q
    |||||| || ||| || ||||||| ||| |||||||||||||||||||||||||||||    
T  4949250 gagagataaagttatagaaaagttgtaccaaaatagttgtacaaatatcatttctcat 4949307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 19 - 56
Target Start/End: Original strand, 31413809 - 31413846
Alignment:
Q  19 aaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    |||||| |||||||||||||||||||||||||||||||    
T  31413809 aaagttgtacaaaaatagttgtacaaatatcatttctc 31413846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 19 - 59
Target Start/End: Complemental strand, 7795062 - 7795022
Alignment:
Q  19 aaagttatacaaaaatagttgtacaaatatcatttctcata 59  Q
    |||||| ||||||||| ||||||||||||||||||||||||    
T  7795062 aaagttgtacaaaaatggttgtacaaatatcatttctcata 7795022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 30250316 - 30250368
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcattt 53  Q
    |||||| || ||||||||| |||| ||| ||||||||||||||||||||||||    
T  30250316 gagagaaaaagttgtacaatagttttaccaaaatagttgtacaaatatcattt 30250368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 44539349 - 44539293
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctca 57  Q
    |||||| || |||||| |||| ||||||||| ||||||||||||||||| |||||||    
T  44539349 gagagataaagttgtataaaaattatacaaatatagttgtacaaatatcgtttctca 44539293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 50890089 - 50890144
Alignment:
Q  1 gagagagaaggttgt-acaaaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    ||||||||| ||||| ||||||||| | |||||||||||||||||||||||||||||    
T  50890089 gagagagaaagttgtcacaaaagttgt-caaaaatagttgtacaaatatcatttctc 50890144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 25 - 56
Target Start/End: Complemental strand, 8485608 - 8485577
Alignment:
Q  25 atacaaaaatagttgtacaaatatcatttctc 56  Q
    ||||||||||||||||||||||||||||||||    
T  8485608 atacaaaaatagttgtacaaatatcatttctc 8485577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 20056451 - 20056396
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    ||||||||| ||||| ||||| |||||  | |||||||||||||||||||||||||    
T  20056451 gagagagaaagttgtccaaaaattataacataatagttgtacaaatatcatttctc 20056396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 58
Target Start/End: Original strand, 24310544 - 24310583
Alignment:
Q  19 aaagttatacaaaaatagttgtacaaatatcatttctcat 58  Q
    |||||| ||||||||| |||||||||||||||||||||||    
T  24310544 aaagttgtacaaaaatggttgtacaaatatcatttctcat 24310583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 56
Target Start/End: Original strand, 26442410 - 26442461
Alignment:
Q  5 gagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    ||||| ||||| |||||||| ||| ||||| |||||||||||||||||||||    
T  26442410 gagaaagttgtgcaaaagttgtaccaaaatggttgtacaaatatcatttctc 26442461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 35037664 - 35037609
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    |||||||||  ||||||||||||| ||  ||||| |||||||||||||||||||||    
T  35037664 gagagagaatattgtacaaaagttgtatcaaaatggttgtacaaatatcatttctc 35037609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 40629356 - 40629411
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    ||||||||| ||||| |||| |||||   |||||||||||||||||||||||||||    
T  40629356 gagagagaaagttgtccaaaggttattacaaaatagttgtacaaatatcatttctc 40629411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 44272826 - 44272881
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    ||||||||| |||||  ||||||| |  ||||||||||||||||||||||||||||    
T  44272826 gagagagaaagttgtttaaaagttgtcaaaaaatagttgtacaaatatcatttctc 44272881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 45521595 - 45521650
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    |||||||||||||||||||||||| |   ||||| | |||||||||||||||||||    
T  45521595 gagagagaaggttgtacaaaagttgtcataaaatggatgtacaaatatcatttctc 45521650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 47105966 - 47105911
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    ||||||||| ||||||||||||||||   ||| || ||||||||||||||||||||    
T  47105966 gagagagaaagttgtacaaaagttatcacaaattaattgtacaaatatcatttctc 47105911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 53662444 - 53662499
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    ||||||||| ||||||||||| || |   |||||||||||||||||||||||||||    
T  53662444 gagagagaaagttgtacaaaaattgttacaaaatagttgtacaaatatcatttctc 53662499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 29 - 59
Target Start/End: Complemental strand, 4974138 - 4974108
Alignment:
Q  29 aaaaatagttgtacaaatatcatttctcata 59  Q
    |||||||||||||||||||||||||||||||    
T  4974138 aaaaatagttgtacaaatatcatttctcata 4974108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 16 - 58
Target Start/End: Original strand, 31995947 - 31995989
Alignment:
Q  16 acaaaagttatacaaaaatagttgtacaaatatcatttctcat 58  Q
    |||||| ||||  ||||||||||||||||||||||||||||||    
T  31995947 acaaaatttatcaaaaaatagttgtacaaatatcatttctcat 31995989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 32294776 - 32294806
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaa 31  Q
    |||||||||||||||||||||||||||||||    
T  32294776 gagagagaaggttgtacaaaagttatacaaa 32294806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 56
Target Start/End: Complemental strand, 45418121 - 45418067
Alignment:
Q  2 agagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    |||||||| |||||| ||||||| ||| ||||| ||| |||||||||||||||||    
T  45418121 agagagaaagttgtagaaaagttgtaccaaaatggttatacaaatatcatttctc 45418067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 56
Target Start/End: Original strand, 1868916 - 1868953
Alignment:
Q  19 aaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    |||||| ||||||||| |||||||||||||||||||||    
T  1868916 aaagttgtacaaaaatggttgtacaaatatcatttctc 1868953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 31240703 - 31240646
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctcat 58  Q
    ||||||||| |||||| |||||||||   ||| | |||||||||||||||||||||||    
T  31240703 gagagagaaagttgtaaaaaagttatcacaaagtggttgtacaaatatcatttctcat 31240646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 58
Target Start/End: Original strand, 54251494 - 54251523
Alignment:
Q  29 aaaaatagttgtacaaatatcatttctcat 58  Q
    ||||||||||||||||||||||||||||||    
T  54251494 aaaaatagttgtacaaatatcatttctcat 54251523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 10250531 - 10250586
Alignment:
Q  1 gagagagaaggttgt-acaaaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    ||||||||| ||||| ||||||||| || |||||||||||| |||||||||||||||    
T  10250531 gagagagaaagttgtcacaaaagttgta-aaaaatagttgttcaaatatcatttctc 10250586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 14090066 - 14090122
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctca 57  Q
    ||||||||| |||||  ||||||| ||||||||| |||| | |||||||||||||||    
T  14090066 gagagagaaagttgtttaaaagttgtacaaaaatggttggataaatatcatttctca 14090122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 25523214 - 25523270
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctca 57  Q
    ||||||||| |||||  ||||||| |   ||||||||||||||||||||||||||||    
T  25523214 gagagagaaagttgtcaaaaagttgtgagaaaatagttgtacaaatatcatttctca 25523270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 34114133 - 34114185
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcattt 53  Q
    |||||| || |||||  ||||||||||  ||||||||||||||||||||||||    
T  34114133 gagagaaaaagttgtcaaaaagttataataaaatagttgtacaaatatcattt 34114185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 4 - 52
Target Start/End: Original strand, 37775446 - 37775494
Alignment:
Q  4 agagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatt 52  Q
    |||||| |||||||||||||| ||  |||||||||||| ||||||||||    
T  37775446 agagaaagttgtacaaaagttgtaataaaatagttgtagaaatatcatt 37775494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 41170827 - 41170776
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcattt 53  Q
    ||||||||| ||||| |||||||| ||| ||||| ||||||||||||||||||    
T  41170827 gagagagaaagttgt-caaaagttgtaccaaaatggttgtacaaatatcattt 41170776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 42815460 - 42815404
Alignment:
Q  1 gagagagaaggttgt-acaaaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    ||||||||| ||||| ||||||||| |   |||||||||||||||||||||||||||    
T  42815460 gagagagaaagttgtcacaaaagttgttacaaaatagttgtacaaatatcatttctc 42815404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 42853991 - 42853939
Alignment:
Q  4 agagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    |||||| |||||  ||||||| |  ||||||||||||||||||||||||||||    
T  42853991 agagaaagttgtctaaaagttgtcaaaaaatagttgtacaaatatcatttctc 42853939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 51224854 - 51224910
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctca 57  Q
    ||||||||| |||||  ||||||| ||  ||||| ||||||||||||||||||||||    
T  51224854 gagagagaaagttgtcaaaaagttgtagcaaaatggttgtacaaatatcatttctca 51224910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 52669625 - 52669680
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatag-ttgtacaaatatcatttctc 56  Q
    ||||||||| |||||||||||||||| || |||| | ||||||||||||||||||||    
T  52669625 gagagagaaagttgtacaaaagttat-cacaaattgtttgtacaaatatcatttctc 52669680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 12 - 56
Target Start/End: Original strand, 53781864 - 53781907
Alignment:
Q  12 ttgtacaaaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    ||||| ||||||| ||||||| |||||||||||||||||||||||    
T  53781864 ttgtataaaagttgtacaaaa-tagttgtacaaatatcatttctc 53781907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 55609181 - 55609236
Alignment:
Q  1 gagagagaaggttgt-acaaaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    ||||||||| ||||| ||||||||| ||||||| | |||||||||||||||||||||    
T  55609181 gagagagaaagttgtcacaaaagttgtacaaaa-tggttgtacaaatatcatttctc 55609236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 48; Significance: 3e-18; HSPs: 54)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 29555854 - 29555909
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||| |||||||    
T  29555854 gagagagaaggttgtacaaaagttatacaaaaatggttgtacaaatattatttctc 29555909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 3 - 56
Target Start/End: Original strand, 14839063 - 14839116
Alignment:
Q  3 gagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    |||||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  14839063 gagagaaggttgtacaaaagttgtacaaaaatggttgtacaaatatcatttctc 14839116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 55264872 - 55264815
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctcat 58  Q
    |||| ||||| ||||| ||||||||||||||||| |||||||||||||||||||||||    
T  55264872 gagaaagaagattgtataaaagttatacaaaaatggttgtacaaatatcatttctcat 55264815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 30664558 - 30664502
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctca 57  Q
    ||||||||| |||||||||||||| |||||||||  |||||||||||||||||||||    
T  30664558 gagagagaaagttgtacaaaagttgtacaaaaatgattgtacaaatatcatttctca 30664502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 47141616 - 47141672
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctca 57  Q
    ||||||||| ||||||||||| |||||| ||||| ||||||||||||||||||||||    
T  47141616 gagagagaaagttgtacaaaaattataccaaaatggttgtacaaatatcatttctca 47141672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 2280232 - 2280177
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    ||||||||| |||||||||||||| ||| ||||| |||||||||||||||||||||    
T  2280232 gagagagaaagttgtacaaaagttgtactaaaatggttgtacaaatatcatttctc 2280177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 7351654 - 7351709
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    |||||||||  |||||||||| |||||||||||| |||||||||||||||||||||    
T  7351654 gagagagaaaattgtacaaaaattatacaaaaatggttgtacaaatatcatttctc 7351709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 32151943 - 32151888
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    ||||||||||||| ||||||| ||||||||||||| ||||||| ||||||||||||    
T  32151943 gagagagaaggttatacaaaaattatacaaaaataattgtacacatatcatttctc 32151888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 50025714 - 50025769
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    ||||||||| ||||||||||| |||||| ||||| |||||||||||||||||||||    
T  50025714 gagagagaaagttgtacaaaatttataccaaaatggttgtacaaatatcatttctc 50025769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 6 - 56
Target Start/End: Original strand, 45517678 - 45517728
Alignment:
Q  6 agaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    |||| ||| |||||||||||||||||||| |||||||||||||||||||||    
T  45517678 agaaagttatacaaaagttatacaaaaatggttgtacaaatatcatttctc 45517728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 4 - 58
Target Start/End: Original strand, 54233487 - 54233541
Alignment:
Q  4 agagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctcat 58  Q
    |||||| |||||||||||||| || |||||| |||||||||||||||||||||||    
T  54233487 agagaaagttgtacaaaagttgtaaaaaaatggttgtacaaatatcatttctcat 54233541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 25559759 - 25559703
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctca 57  Q
    ||||||||| |||||| |||| |||||| ||||| ||||||||||||||||||||||    
T  25559759 gagagagaaagttgtataaaaattataccaaaatggttgtacaaatatcatttctca 25559703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 39629854 - 39629906
Alignment:
Q  1 gagagagaaggttgt-acaaaagttatacaaaaatagttgtacaaatatcatt 52  Q
    ||||||||||||||| ||||||||| || ||||||||||||||||||||||||    
T  39629854 gagagagaaggttgtcacaaaagttgtaaaaaaatagttgtacaaatatcatt 39629906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 11 - 55
Target Start/End: Complemental strand, 44689837 - 44689793
Alignment:
Q  11 gttgtacaaaagttatacaaaaatagttgtacaaatatcatttct 55  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||    
T  44689837 gttgtacaaaagttgtacaaaaatggttgtacaaatatcatttct 44689793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 12 - 59
Target Start/End: Complemental strand, 17118441 - 17118394
Alignment:
Q  12 ttgtacaaaagttatacaaaaatagttgtacaaatatcatttctcata 59  Q
    ||||||||||||| ||||||||| |||||||||||||||||| |||||    
T  17118441 ttgtacaaaagttgtacaaaaatggttgtacaaatatcatttttcata 17118394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 42888788 - 42888843
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    |||||||||  ||||||||||||| ||||||||| | |||||||||||||||||||    
T  42888788 gagagagaaaattgtacaaaagttgtacaaaaatggctgtacaaatatcatttctc 42888843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 48205100 - 48205045
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    |||||||||  |||||||||| ||||||||||||  ||||||||||||||||||||    
T  48205100 gagagagaaaattgtacaaaaattatacaaaaatgattgtacaaatatcatttctc 48205045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 1402705 - 1402647
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctcata 59  Q
    |||||||||||||||||||||||| |   ||||| | ||||||||||||||||||||||    
T  1402705 gagagagaaggttgtacaaaagttgtcataaaatggatgtacaaatatcatttctcata 1402647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 16295519 - 16295461
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctcata 59  Q
    ||||||||| |||||||||||||| ||  ||| | ||||||||||||||||||||||||    
T  16295519 gagagagaaagttgtacaaaagttgtatcaaattggttgtacaaatatcatttctcata 16295461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 2 - 56
Target Start/End: Original strand, 25806545 - 25806599
Alignment:
Q  2 agagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    |||||||| |||||| ||||||||||| |||||| || |||||||||||||||||    
T  25806545 agagagaaagttgtataaaagttataccaaaataattatacaaatatcatttctc 25806599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 4 - 58
Target Start/End: Complemental strand, 52100313 - 52100259
Alignment:
Q  4 agagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctcat 58  Q
    |||||| ||||||||||| ||||  |||||| |||||||||||||||||||||||    
T  52100313 agagaaagttgtacaaaaattattaaaaaatggttgtacaaatatcatttctcat 52100259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 1295387 - 1295330
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctcat 58  Q
    |||||| || ||||| ||||||||||   |||||||||||||||||||||||||||||    
T  1295387 gagagaaaaagttgtccaaaagttatcacaaaatagttgtacaaatatcatttctcat 1295330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 11327163 - 11327106
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctcat 58  Q
    ||||||||| |||||||||||||| |   ||||| |||||||||||||||||||||||    
T  11327163 gagagagaaagttgtacaaaagttgtcacaaaatggttgtacaaatatcatttctcat 11327106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 19 - 56
Target Start/End: Complemental strand, 35368659 - 35368622
Alignment:
Q  19 aaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    |||||| |||||||||||||||||||||||||||||||    
T  35368659 aaagttgtacaaaaatagttgtacaaatatcatttctc 35368622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 38471697 - 38471644
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttc 54  Q
    |||||||||  ||||||||||||| ||| ||||| |||||||||||||||||||    
T  38471697 gagagagaaaattgtacaaaagttgtaccaaaatggttgtacaaatatcatttc 38471644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 42643290 - 42643233
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctcat 58  Q
    ||||||||| |||||||||||||| | | ||| | |||||||||||||||||||||||    
T  42643290 gagagagaaagttgtacaaaagttgttccaaattggttgtacaaatatcatttctcat 42643233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 16 - 57
Target Start/End: Original strand, 51137067 - 51137108
Alignment:
Q  16 acaaaagttatacaaaaatagttgtacaaatatcatttctca 57  Q
    |||||||||||  |||||||||||||||||||||||||||||    
T  51137067 acaaaagttattaaaaaatagttgtacaaatatcatttctca 51137108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 288781 - 288725
Alignment:
Q  1 gagagagaaggttgt-acaaaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    ||||||||| ||||| |||||||||||| |||||| ||||| |||||||||||||||    
T  288781 gagagagaaagttgtcacaaaagttataaaaaaattgttgttcaaatatcatttctc 288725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 12 - 56
Target Start/End: Original strand, 9159063 - 9159107
Alignment:
Q  12 ttgtacaaaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    |||||||||| || ||||||||| |||||||||||||||||||||    
T  9159063 ttgtacaaaaattgtacaaaaatggttgtacaaatatcatttctc 9159107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 38296678 - 38296734
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctca 57  Q
    |||||||||  ||||||||||||| ||| ||||| ||||||||||||| ||||||||    
T  38296678 gagagagaaaattgtacaaaagttgtactaaaatggttgtacaaatattatttctca 38296734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 54
Target Start/End: Complemental strand, 25595981 - 25595942
Alignment:
Q  15 tacaaaagttatacaaaaatagttgtacaaatatcatttc 54  Q
    |||||||||| ||| |||||||||||||||||||||||||    
T  25595981 tacaaaagttgtaccaaaatagttgtacaaatatcatttc 25595942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 36301224 - 36301279
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    ||||||||| |||||||||||||| |||||||||  | |||||||||| |||||||    
T  36301224 gagagagaaagttgtacaaaagttgtacaaaaatgatcgtacaaatataatttctc 36301279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 58
Target Start/End: Original strand, 43149366 - 43149405
Alignment:
Q  19 aaagttatacaaaaatagttgtacaaatatcatttctcat 58  Q
    |||||| |||||||||||||||||||||| ||||||||||    
T  43149366 aaagttgtacaaaaatagttgtacaaataacatttctcat 43149405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 54
Target Start/End: Complemental strand, 52381223 - 52381184
Alignment:
Q  15 tacaaaagttatacaaaaatagttgtacaaatatcatttc 54  Q
    |||||||||||||| ||||| |||||||||||||||||||    
T  52381223 tacaaaagttataccaaaatggttgtacaaatatcatttc 52381184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 28 - 58
Target Start/End: Original strand, 6178468 - 6178498
Alignment:
Q  28 caaaaatagttgtacaaatatcatttctcat 58  Q
    |||||||||||||||||||||||||||||||    
T  6178468 caaaaatagttgtacaaatatcatttctcat 6178498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 56
Target Start/End: Complemental strand, 9027667 - 9027613
Alignment:
Q  2 agagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    ||||| || |||||||||||||| || |||||| |||||||||||| ||||||||    
T  9027667 agagataaagttgtacaaaagttgtataaaaatggttgtacaaataacatttctc 9027613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 18 - 56
Target Start/End: Original strand, 34145571 - 34145609
Alignment:
Q  18 aaaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    |||| |||||| |||||||||||||||||||||||||||    
T  34145571 aaaaattatactaaaatagttgtacaaatatcatttctc 34145609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 18 - 56
Target Start/End: Complemental strand, 36799436 - 36799398
Alignment:
Q  18 aaaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    |||||||||  ||||||||||||||||||||||||||||    
T  36799436 aaaagttatcaaaaaatagttgtacaaatatcatttctc 36799398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 43895001 - 43895055
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttct 55  Q
    |||||| || ||||||||||| |||||||||||| ||||||||| | ||||||||    
T  43895001 gagagataaagttgtacaaaaattatacaaaaatggttgtacaagtttcatttct 43895055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 50879650 - 50879592
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctcata 59  Q
    ||||||||| |||||||||||||| |   ||  ||||||||||||||||||||||||||    
T  50879650 gagagagaaagttgtacaaaagttgtcacaatttagttgtacaaatatcatttctcata 50879592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 56
Target Start/End: Complemental strand, 29057696 - 29057659
Alignment:
Q  19 aaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    |||||| ||||||||| |||||||||||||||||||||    
T  29057696 aaagttgtacaaaaatggttgtacaaatatcatttctc 29057659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 56
Target Start/End: Original strand, 29846914 - 29846951
Alignment:
Q  19 aaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    |||||| ||||||||| |||||||||||||||||||||    
T  29846914 aaagttgtacaaaaatggttgtacaaatatcatttctc 29846951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 41877743 - 41877686
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctcat 58  Q
    ||||||||| |||||  ||||||| ||  ||||| |||||||||||||||||||||||    
T  41877743 gagagagaaagttgtcaaaaagttgtagcaaaatggttgtacaaatatcatttctcat 41877686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 27 - 56
Target Start/End: Complemental strand, 53021218 - 53021189
Alignment:
Q  27 acaaaaatagttgtacaaatatcatttctc 56  Q
    ||||||||||||||||||||||||||||||    
T  53021218 acaaaaatagttgtacaaatatcatttctc 53021189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 12 - 56
Target Start/End: Complemental strand, 884578 - 884534
Alignment:
Q  12 ttgtacaaaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    |||||| ||| |||||  |||||||||||||||||||||||||||    
T  884578 ttgtaccaaaattataacaaaatagttgtacaaatatcatttctc 884534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 14847534 - 14847590
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctca 57  Q
    |||||||||  || |||||||||| ||| ||||| |||| |||||||||||||||||    
T  14847534 gagagagaaaattatacaaaagttgtaccaaaatggttgcacaaatatcatttctca 14847590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 16479687 - 16479632
Alignment:
Q  1 gagagagaaggttgt-acaaaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    ||||||||| ||||| ||||||||| ||||||| | |||||||||||||||||||||    
T  16479687 gagagagaaagttgtcacaaaagttgtacaaaa-tggttgtacaaatatcatttctc 16479632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 19418174 - 19418230
Alignment:
Q  2 agagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctcat 58  Q
    ||||||||||||||  ||||||| |   ||||| |||||||||||||||||||||||    
T  19418174 agagagaaggttgtcaaaaagttgtcataaaatggttgtacaaatatcatttctcat 19418230  T

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Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 12 - 56
Target Start/End: Complemental strand, 33971927 - 33971883
Alignment:
Q  12 ttgtacaaaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    ||||||||||||| ||||| ||| |||||| ||||||||||||||    
T  33971927 ttgtacaaaagttgtacaagaatggttgtataaatatcatttctc 33971883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 34900692 - 34900640
Alignment:
Q  4 agagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    ||||||||||||||||||||| |   ||||||| ||||||| |||||||||||    
T  34900692 agagaaggttgtacaaaagttgtcataaaatagatgtacaattatcatttctc 34900640  T

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Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 28 - 56
Target Start/End: Original strand, 38957543 - 38957571
Alignment:
Q  28 caaaaatagttgtacaaatatcatttctc 56  Q
    |||||||||||||||||||||||||||||    
T  38957543 caaaaatagttgtacaaatatcatttctc 38957571  T

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Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 41308980 - 41308921
Alignment:
Q  1 gagagagaaggttgt-acaaaagttatacaaaaatagttgtacaaatatcatttctcatac 60  Q
    ||||||||| ||||| |||||||||||| |||||| ||||| |||||||||||||| ||||    
T  41308980 gagagagaaagttgtcacaaaagttata-aaaaatggttgttcaaatatcatttctaatac 41308921  T

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Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 48944726 - 48944782
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctca 57  Q
    |||||||||  ||||||||||||| |   ||||| ||||||||||||||||||||||    
T  48944726 gagagagaaaattgtacaaaagttgttagaaaatggttgtacaaatatcatttctca 48944782  T

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Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 16 - 56
Target Start/End: Original strand, 50559243 - 50559283
Alignment:
Q  16 acaaaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    ||||||||| |  ||||||||||||||||||||||||||||    
T  50559243 acaaaagttgtcaaaaaatagttgtacaaatatcatttctc 50559283  T

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Target: scaffold0014 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 145116 - 145061
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    ||||||||| |||||||||||||| ||||||||| |||||||||||||||||||||    
T  145116 gagagagaatgttgtacaaaagttgtacaaaaatggttgtacaaatatcatttctc 145061  T

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Target: chr6 (Bit Score: 44; Significance: 7e-16; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 34792077 - 34792022
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    |||||||||||||||||||||||| |||||||||  ||||||||||||||||||||    
T  34792077 gagagagaaggttgtacaaaagttgtacaaaaatgattgtacaaatatcatttctc 34792022  T

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Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 27790251 - 27790308
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctcat 58  Q
    |||||| ||||||||| ||||||| ||||||||| |||||||||||||||||||||||    
T  27790251 gagagataaggttgtataaaagttgtacaaaaatggttgtacaaatatcatttctcat 27790308  T

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Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 6997566 - 6997622
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctca 57  Q
    ||||||| | || |||||||| |||||||||||| ||||||||||||||||||||||    
T  6997566 gagagaggaagtagtacaaaaattatacaaaaatggttgtacaaatatcatttctca 6997622  T

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Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 57
Target Start/End: Original strand, 9395360 - 9395398
Alignment:
Q  19 aaagttatacaaaaatagttgtacaaatatcatttctca 57  Q
    |||||| ||||||||||||||||||||||||||||||||    
T  9395360 aaagttgtacaaaaatagttgtacaaatatcatttctca 9395398  T

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Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 19 - 59
Target Start/End: Complemental strand, 16121200 - 16121160
Alignment:
Q  19 aaagttatacaaaaatagttgtacaaatatcatttctcata 59  Q
    |||||| ||||||||| ||||||||||||||||||||||||    
T  16121200 aaagttgtacaaaaatggttgtacaaatatcatttctcata 16121160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 3339515 - 3339570
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    ||||||||| |||||||||||||| |   ||||| |||||||||||||||||||||    
T  3339515 gagagagaaagttgtacaaaagttgtcacaaaatggttgtacaaatatcatttctc 3339570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 25924880 - 25924938
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctcata 59  Q
    ||||||||| |||||  ||||||| ||  ||||| ||||||||||||||||||||||||    
T  25924880 gagagagaaagttgtcaaaaagttgtagcaaaatggttgtacaaatatcatttctcata 25924938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 56
Target Start/End: Original strand, 2165323 - 2165360
Alignment:
Q  19 aaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    |||||| ||||||||| |||||||||||||||||||||    
T  2165323 aaagttgtacaaaaatggttgtacaaatatcatttctc 2165360  T

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Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 56
Target Start/End: Original strand, 2176956 - 2176993
Alignment:
Q  19 aaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    |||||| ||||||||| |||||||||||||||||||||    
T  2176956 aaagttgtacaaaaatggttgtacaaatatcatttctc 2176993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 16743282 - 16743339
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctcat 58  Q
    ||||||||| |||||  |||| ||||  |||||| |||||||||||||||||||||||    
T  16743282 gagagagaaagttgtctaaaaattattaaaaaatggttgtacaaatatcatttctcat 16743339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 31869122 - 31869066
Alignment:
Q  1 gagagagaaggttgt-acaaaagttatacaaaaatagttgtacaaatatcatttctca 57  Q
    ||||||||| ||||| ||||||||| ||||||| |||||||||||||||| |||||||    
T  31869122 gagagagaaagttgtcacaaaagttgtacaaaa-tagttgtacaaatatcttttctca 31869066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 58
Target Start/End: Complemental strand, 32644650 - 32644621
Alignment:
Q  29 aaaaatagttgtacaaatatcatttctcat 58  Q
    ||||||||||||||||||||||||||||||    
T  32644650 aaaaatagttgtacaaatatcatttctcat 32644621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 28883764 - 28883820
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctca 57  Q
    ||||||||| |||||  ||| |||||  |||||| ||||||||||||||||||||||    
T  28883764 gagagagaaagttgtcaaaaggttattaaaaaatggttgtacaaatatcatttctca 28883820  T

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Target: scaffold0024 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 48709 - 48657
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcattt 53  Q
    ||||||||||||||||||||| || |||||||||  |||||||||||||||||    
T  48709 gagagagaaggttgtacaaaaattgtacaaaaatgattgtacaaatatcattt 48657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0651 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0651
Description:

Target: scaffold0651; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 4862 - 4917
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    ||||||||| ||||||||||| || ||| ||||| |||||||||||||||||||||    
T  4862 gagagagaaagttgtacaaaaattgtaccaaaatggttgtacaaatatcatttctc 4917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 3 - 56
Target Start/End: Original strand, 204463 - 204516
Alignment:
Q  3 gagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    |||||||||||||||||||||| |   ||||||| |||||||||||||||||||    
T  204463 gagagaaggttgtacaaaagttgtcagaaaatagatgtacaaatatcatttctc 204516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 4 - 59
Target Start/End: Complemental strand, 9829 - 9773
Alignment:
Q  4 agagaaggttgt-acaaaagttatacaaaaatagttgtacaaatatcatttctcata 59  Q
    |||||| ||||| |||||| ||||| |||||| ||||||||||||||||||||||||    
T  9829 agagaaagttgtcacaaaaattataaaaaaatggttgtacaaatatcatttctcata 9773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 18650 - 18594
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctca 57  Q
    ||||||||| ||||||||||||||||   ||| | ||||||||||||||||||||||    
T  18650 gagagagaaagttgtacaaaagttatcacaaattggttgtacaaatatcatttctca 18594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 56
Target Start/End: Complemental strand, 17086 - 17049
Alignment:
Q  19 aaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    |||||| ||||||||| |||||||||||||||||||||    
T  17086 aaagttgtacaaaaatggttgtacaaatatcatttctc 17049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0172 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 17030 - 16973
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctcat 58  Q
    ||||||||| |||||  ||||||| ||  ||||| |||||||||||||||||||||||    
T  17030 gagagagaaagttgtcaaaaagttgtagtaaaatggttgtacaaatatcatttctcat 16973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 76635 - 76690
Alignment:
Q  1 gagagagaaggttgt-acaaaagttatacaaaaatagttgtacaaatatcatttctc 56  Q
    ||||||||| ||||| |||||| ||||| |||||||||||| |||||||||||||||    
T  76635 gagagagaaagttgtcacaaaaattata-aaaaatagttgttcaaatatcatttctc 76690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 155961 - 155905
Alignment:
Q  1 gagagagaaggttgtacaaaagttatacaaaaatagttgtacaaatatcatttctca 57  Q
    ||||||||| |||||  ||||||| ||  ||||| ||||||||||||||||||||||    
T  155961 gagagagaaagttgtcaaaaagttgtaataaaatggttgtacaaatatcatttctca 155905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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