View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16010_low_12 (Length: 354)
Name: NF16010_low_12
Description: NF16010
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16010_low_12 |
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Alignment Details
Target: chr8 (Bit Score: 62; Significance: 1e-26; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 132 - 205
Target Start/End: Original strand, 15112686 - 15112759
Alignment:
| Q |
132 |
ggacattagtattaggtttagccattaaaacacataaagagaatggaactgaggtgtagaaacaaagagagaag |
205 |
Q |
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| T |
15112686 |
ggacattagtattaggtttagccattaaaacacatagagagaatggggctgaggtgtagaaacaaagagagaag |
15112759 |
T |
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Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 303 - 340
Target Start/End: Original strand, 15112940 - 15112977
Alignment:
| Q |
303 |
agatgtaacaatatttattgctggagctctagaattat |
340 |
Q |
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| T |
15112940 |
agatgtaaaaatatttattgctggagctctagaattat |
15112977 |
T |
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