View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16011_high_36 (Length: 226)
Name: NF16011_high_36
Description: NF16011
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16011_high_36 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 210; Significance: 1e-115; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 30019469 - 30019693
Alignment:
| Q |
1 |
taagtgttgaactagtcttatttctgatgaggttaattattgtctgccaaatatgtgagagtttgtattaaattaaatacttttgttgcaagatggaaat |
100 |
Q |
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| T |
30019469 |
taagtgttgaactagtcttatttctgatgaggttaattattgtctgccaaatatgtgagagtttgtattaaattaaatacttttgttgcaagatggaa-t |
30019567 |
T |
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| Q |
101 |
aagatcatttattgtatatatagccctattaatattatagctgttccattgtttcaataatacttcagcttttatcaccaaattaccatttctctagaat |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
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| T |
30019568 |
aagatcatttattgtatatatagccctattaatattatagctgttccattgtttcaataatacttcagcctttatcaccaaattaccatttctctagaat |
30019667 |
T |
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| Q |
201 |
gaaaaaggtatacaagagtctctact |
226 |
Q |
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|||||||| ||||||||||||||||| |
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| T |
30019668 |
gaaaaaggcatacaagagtctctact |
30019693 |
T |
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