View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16012_low_1 (Length: 515)

Name: NF16012_low_1
Description: NF16012
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16012_low_1
NF16012_low_1
[»] chr5 (25 HSPs)
chr5 (6-495)||(10486304-10486806)
chr5 (34-252)||(34481457-34481675)
chr5 (48-242)||(588033-588220)
chr5 (53-239)||(20208152-20208337)
chr5 (317-486)||(34481210-34481379)
chr5 (49-211)||(22094678-22094840)
chr5 (42-238)||(38357990-38358186)
chr5 (14-238)||(35122099-35122323)
chr5 (51-157)||(380505-380611)
chr5 (8-238)||(30509434-30509664)
chr5 (8-238)||(30549774-30550004)
chr5 (14-198)||(31864352-31864536)
chr5 (51-156)||(42259885-42259990)
chr5 (14-198)||(31864797-31864981)
chr5 (53-198)||(7000219-7000364)
chr5 (14-238)||(6866887-6867111)
chr5 (69-160)||(22174442-22174533)
chr5 (105-238)||(19512949-19513082)
chr5 (86-157)||(476817-476888)
chr5 (192-234)||(34338411-34338453)
chr5 (36-96)||(29323558-29323618)
chr5 (53-152)||(10780810-10780909)
chr5 (30-157)||(26262285-26262412)
chr5 (6-94)||(26261702-26261790)
chr5 (50-154)||(35637742-35637845)
[»] chr4 (38 HSPs)
chr4 (6-485)||(3129374-3129858)
chr4 (14-265)||(7662701-7662953)
chr4 (315-495)||(47541179-47541359)
chr4 (245-487)||(8654697-8654951)
chr4 (34-252)||(55299121-55299339)
chr4 (48-488)||(2631659-2632111)
chr4 (34-252)||(23872889-23873107)
chr4 (34-488)||(20675283-20675749)
chr4 (336-498)||(7662966-7663128)
chr4 (49-238)||(19114959-19115148)
chr4 (49-239)||(8935596-8935786)
chr4 (53-238)||(10562765-10562950)
chr4 (14-238)||(26694451-26694675)
chr4 (75-241)||(23657817-23657983)
chr4 (51-157)||(43516178-43516284)
chr4 (53-236)||(42778763-42778946)
chr4 (373-488)||(55298881-55298996)
chr4 (70-166)||(19648297-19648393)
chr4 (317-488)||(23873184-23873355)
chr4 (51-215)||(34975081-34975245)
chr4 (54-157)||(2072144-2072247)
chr4 (326-488)||(8486698-8486860)
chr4 (53-238)||(20396105-20396290)
chr4 (48-216)||(53810386-53810554)
chr4 (52-236)||(56336932-56337115)
chr4 (51-157)||(42952935-42953041)
chr4 (48-236)||(9690947-9691135)
chr4 (132-238)||(29553251-29553357)
chr4 (36-96)||(17468524-17468584)
chr4 (50-238)||(40688589-40688777)
chr4 (193-236)||(36183062-36183105)
chr4 (173-215)||(4524178-4524220)
chr4 (50-95)||(7099148-7099193)
chr4 (192-236)||(2072065-2072109)
chr4 (36-96)||(36951967-36952027)
chr4 (53-125)||(38296342-38296414)
chr4 (187-239)||(49925833-49925885)
chr4 (192-236)||(52617436-52617480)
[»] scaffold0002 (2 HSPs)
scaffold0002 (6-487)||(327520-328013)
scaffold0002 (6-487)||(312066-312559)
[»] scaffold0029 (1 HSPs)
scaffold0029 (6-487)||(134239-134732)
[»] chr7 (32 HSPs)
chr7 (20-495)||(15653107-15653591)
chr7 (24-217)||(46626366-46626559)
chr7 (34-252)||(13440562-13440780)
chr7 (212-476)||(46623966-46624242)
chr7 (20-239)||(45993098-45993316)
chr7 (317-488)||(13440314-13440485)
chr7 (317-495)||(12378436-12378614)
chr7 (42-238)||(18767931-18768127)
chr7 (21-238)||(18671693-18671910)
chr7 (51-198)||(4077831-4077978)
chr7 (14-208)||(5327316-5327510)
chr7 (51-157)||(19544832-19544938)
chr7 (14-239)||(13553577-13553802)
chr7 (14-203)||(41340091-41340279)
chr7 (42-238)||(34457579-34457775)
chr7 (54-236)||(23887609-23887790)
chr7 (54-236)||(23898785-23898966)
chr7 (50-142)||(39658816-39658908)
chr7 (36-163)||(33820974-33821101)
chr7 (42-230)||(36227571-36227759)
chr7 (53-238)||(34232222-34232400)
chr7 (37-238)||(27218538-27218739)
chr7 (192-252)||(12378299-12378359)
chr7 (48-195)||(17856295-17856441)
chr7 (36-74)||(19293538-19293576)
chr7 (6-124)||(39930981-39931099)
chr7 (36-72)||(41768823-41768859)
chr7 (197-236)||(8752965-8753004)
chr7 (196-238)||(12308690-12308732)
chr7 (88-157)||(19735122-19735191)
chr7 (48-116)||(20704900-20704968)
chr7 (48-116)||(20872944-20873012)
[»] chr8 (25 HSPs)
chr8 (21-486)||(7452615-7453092)
chr8 (51-239)||(36157676-36157863)
chr8 (318-488)||(16420719-16420889)
chr8 (20-208)||(4987464-4987651)
chr8 (64-238)||(17659354-17659528)
chr8 (20-212)||(23942636-23942828)
chr8 (50-153)||(12341175-12341278)
chr8 (66-220)||(36025062-36025216)
chr8 (50-236)||(37165550-37165736)
chr8 (56-145)||(6245698-6245787)
chr8 (50-238)||(11393777-11393965)
chr8 (106-238)||(44082497-44082629)
chr8 (49-236)||(25193613-25193800)
chr8 (67-157)||(15439721-15439811)
chr8 (67-157)||(15531025-15531115)
chr8 (51-157)||(24794350-24794456)
chr8 (51-236)||(29721341-29721525)
chr8 (438-498)||(19384544-19384599)
chr8 (50-151)||(16048345-16048446)
chr8 (42-230)||(6901440-6901627)
chr8 (103-166)||(8902422-8902485)
chr8 (53-152)||(17700089-17700188)
chr8 (86-157)||(18187750-18187821)
chr8 (192-238)||(4331713-4331759)
chr8 (53-205)||(45255267-45255419)
[»] scaffold0131 (1 HSPs)
scaffold0131 (6-398)||(3941-4338)
[»] chr2 (28 HSPs)
chr2 (14-495)||(45421773-45422267)
chr2 (34-488)||(26894025-26894491)
chr2 (34-488)||(26899464-26899930)
chr2 (34-487)||(13550386-13550844)
chr2 (34-285)||(13551053-13551297)
chr2 (59-239)||(11028392-11028572)
chr2 (49-238)||(15018200-15018389)
chr2 (20-238)||(35488360-35488578)
chr2 (42-238)||(28399971-28400167)
chr2 (14-239)||(9668399-9668624)
chr2 (53-236)||(1380607-1380790)
chr2 (53-235)||(11196877-11197059)
chr2 (49-215)||(22724867-22725033)
chr2 (14-166)||(11233883-11234035)
chr2 (317-488)||(43627760-43627931)
chr2 (49-198)||(25380822-25380971)
chr2 (50-154)||(44028649-44028753)
chr2 (40-163)||(6824009-6824132)
chr2 (49-122)||(33583855-33583928)
chr2 (20-155)||(8065660-8065795)
chr2 (318-444)||(13550882-13551008)
chr2 (48-166)||(36804714-36804832)
chr2 (86-139)||(21579650-21579703)
chr2 (424-488)||(33548133-33548197)
chr2 (58-157)||(20004563-20004662)
chr2 (424-495)||(31085452-31085523)
chr2 (194-236)||(33583924-33583966)
chr2 (192-220)||(6823952-6823980)
[»] chr3 (38 HSPs)
chr3 (20-495)||(30166743-30167230)
chr3 (248-493)||(49731559-49731816)
chr3 (34-252)||(6175891-6176109)
chr3 (81-241)||(29309928-29310088)
chr3 (14-238)||(36709433-36709657)
chr3 (14-238)||(21739916-21740140)
chr3 (50-157)||(31675535-31675642)
chr3 (51-157)||(40513154-40513260)
chr3 (51-239)||(43121104-43121285)
chr3 (14-238)||(15481151-15481374)
chr3 (42-238)||(45684699-45684895)
chr3 (317-488)||(2813208-2813379)
chr3 (317-488)||(29309669-29309840)
chr3 (50-157)||(31920780-31920887)
chr3 (51-239)||(50544746-50544933)
chr3 (14-238)||(42674832-42675055)
chr3 (317-488)||(6176186-6176357)
chr3 (51-198)||(23819127-23819274)
chr3 (53-238)||(47537791-47537976)
chr3 (53-238)||(48192322-48192505)
chr3 (392-495)||(9379351-9379454)
chr3 (51-157)||(34829997-34830103)
chr3 (42-198)||(8943901-8944055)
chr3 (14-238)||(14863858-14864082)
chr3 (50-156)||(55367215-55367320)
chr3 (48-216)||(24926115-24926283)
chr3 (36-96)||(16664742-16664802)
chr3 (86-141)||(53941923-53941978)
chr3 (195-239)||(35537290-35537334)
chr3 (53-125)||(48930362-48930434)
chr3 (53-152)||(12341687-12341786)
chr3 (314-349)||(19875643-19875678)
chr3 (67-238)||(46190015-46190186)
chr3 (192-238)||(8130474-8130520)
chr3 (192-238)||(19875766-19875812)
chr3 (51-165)||(46908100-46908214)
chr3 (81-166)||(10868198-10868283)
chr3 (194-238)||(17039573-17039617)
[»] scaffold0418 (2 HSPs)
scaffold0418 (14-265)||(8101-8351)
scaffold0418 (336-498)||(7926-8088)
[»] chr1 (32 HSPs)
chr1 (241-500)||(21528414-21528685)
chr1 (34-252)||(32352723-32352941)
chr1 (34-252)||(48072844-48073062)
chr1 (315-495)||(36306038-36306218)
chr1 (51-239)||(28097396-28097583)
chr1 (113-486)||(37530829-37531205)
chr1 (51-238)||(25504424-25504611)
chr1 (56-157)||(13867268-13867369)
chr1 (51-156)||(45795880-45795985)
chr1 (317-488)||(32353005-32353176)
chr1 (317-488)||(48073139-48073310)
chr1 (51-197)||(7396152-7396298)
chr1 (53-239)||(26721155-26721341)
chr1 (50-239)||(39430799-39430988)
chr1 (69-220)||(38070373-38070524)
chr1 (14-239)||(49264357-49264582)
chr1 (49-157)||(3544529-3544637)
chr1 (431-495)||(48265540-48265604)
chr1 (49-157)||(1248014-1248122)
chr1 (49-232)||(40562986-40563169)
chr1 (14-239)||(20796190-20796404)
chr1 (173-244)||(29139964-29140035)
chr1 (64-206)||(10710640-10710782)
chr1 (51-220)||(5809122-5809291)
chr1 (66-155)||(19014429-19014518)
chr1 (67-141)||(20987775-20987849)
chr1 (49-156)||(27393377-27393484)
chr1 (192-235)||(28358416-28358459)
chr1 (50-141)||(52692091-52692182)
chr1 (86-139)||(31068729-31068782)
chr1 (192-236)||(19014555-19014598)
chr1 (316-352)||(28358287-28358323)
[»] chr6 (33 HSPs)
chr6 (34-252)||(23346880-23347098)
chr6 (34-252)||(15674338-15674556)
chr6 (34-256)||(26205853-26206068)
chr6 (49-239)||(502960-503150)
chr6 (53-238)||(11060294-11060479)
chr6 (20-239)||(33640440-33640658)
chr6 (53-238)||(17078622-17078807)
chr6 (50-238)||(13086062-13086250)
chr6 (75-239)||(19256162-19256326)
chr6 (317-488)||(23347175-23347346)
chr6 (20-216)||(23065445-23065641)
chr6 (59-238)||(33805303-33805482)
chr6 (50-160)||(26514325-26514435)
chr6 (53-238)||(18050881-18051066)
chr6 (49-157)||(14843565-14843673)
chr6 (42-220)||(21549389-21549567)
chr6 (317-488)||(25318115-25318286)
chr6 (317-488)||(26205609-26205780)
chr6 (37-238)||(19350467-19350668)
chr6 (317-488)||(15674086-15674261)
chr6 (111-238)||(32186206-32186333)
chr6 (130-256)||(25318359-25318478)
chr6 (90-157)||(14686477-14686544)
chr6 (50-157)||(25350826-25350933)
chr6 (192-238)||(2923394-2923440)
chr6 (111-238)||(4478511-4478641)
chr6 (50-238)||(11469092-11469279)
chr6 (37-157)||(29976424-29976544)
chr6 (463-495)||(33630351-33630383)
chr6 (194-236)||(13497697-13497739)
chr6 (114-163)||(24573714-24573763)
chr6 (80-133)||(34434888-34434941)
chr6 (48-116)||(17228636-17228704)
[»] scaffold0308 (1 HSPs)
scaffold0308 (8-238)||(17668-17898)
[»] scaffold0179 (2 HSPs)
scaffold0179 (53-239)||(8054-8240)
scaffold0179 (53-239)||(12988-13174)
[»] scaffold0043 (1 HSPs)
scaffold0043 (49-157)||(34037-34145)
[»] scaffold0007 (1 HSPs)
scaffold0007 (53-238)||(182638-182823)
[»] scaffold0189 (1 HSPs)
scaffold0189 (58-166)||(6683-6791)
[»] scaffold0048 (1 HSPs)
scaffold0048 (59-160)||(63737-63838)
[»] scaffold0912 (1 HSPs)
scaffold0912 (174-238)||(2426-2490)
[»] scaffold0113 (1 HSPs)
scaffold0113 (60-160)||(36105-36205)
[»] scaffold0016 (1 HSPs)
scaffold0016 (59-157)||(28378-28476)


Alignment Details
Target: chr5 (Bit Score: 350; Significance: 0; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 350; E-Value: 0
Query Start/End: Original strand, 6 - 495
Target Start/End: Original strand, 10486304 - 10486806
Alignment:
Q  6 cataggataattagttggataggatggaaaactgtttgttccaaaaaggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttct 105  Q
    ||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||| |    
T  10486304 cataggaaaattagttggataggatggaaaactatttgttccaaaaaggagtatggaggtttgggggtgagaaagttgaaggagtttaatagtgctttgt 10486403  T
Q  106 t-agggaaatggtgttggcggatgctggtggatagaggtggtttgtggtatagagttttagttgccaagtatggcgaattaggtggcaggttggaggttg 204  Q
    | |||||||||||||||||||||| ||||||| | || ||||||||||||||  ||||||||||||| ||||||||||||||||||||||||||||||||    
T  10486404 ttagggaaatggtgttggcggatgttggtggacatagatggtttgtggtatacggttttagttgccaggtatggcgaattaggtggcaggttggaggttg 10486503  T
Q  205 ggggccggagtgtttcgtgttggtggagggaggtgagtcgtcttaggggtagtgatggtgatggagagggcggctggtttgttgatcgtgtggctagcag 304  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||| ||||||||| ||    
T  10486504 ggggccggagtgtttcgtgttggtggagggaggtgagtcgtcttaggggtagtgatggtgatggagagtgcagctggtttgttgatcatgtggctaggag 10486603  T
Q  305 ggttggagat------------ttgttttggtttgataggtggttaggggatgttcctttttgtgtccgttttagtagactgttagagttaacagagaat 392  Q
    ||||||||||            ||||||||||| |||||||||||||||||| |||||||||||||||||||| |||| ||||| ||||||||| |||||    
T  10486604 ggttggagatggagctgatacgttgttttggttggataggtggttaggggatcttcctttttgtgtccgttttcgtaggctgtttgagttaacatagaat 10486703  T
Q  393 aagttcatgtctgtggcaaacttgttctctgttgattcggagcagcggggggttatgtggaggtggagacgtcgtttgtggcagtgggaggaggagatgt 492  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||| ||||    
T  10486704 aagttcatgtctgtggcagacttgttctctgttgattcggagcagcggggggttatgtggaggtggagacgtaggttgtggcagtgggaggaggacatgt 10486803  T
Q  493 tag 495  Q
    |||    
T  10486804 tag 10486806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 34 - 252
Target Start/End: Complemental strand, 34481675 - 34481457
Alignment:
Q  34 aaactgtttgttccaaaaaggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaatggtgttggcggatgctggt 133  Q
    ||||||||||||  |||||||||||||| ||||||||||||||  |  ||||||||||||| |  ||||| |||||||||||||||||||||||| ||||    
T  34481675 aaactgtttgtttaaaaaaggagtatggtggtttgggggtgaggaaagtgaaggagtttaacatagctttgttagggaaatggtgttggcggatgttggt 34481576  T
Q  134 ggatagaggtggtttgtggtatagagttttagttgccaagtatggcgaattaggtggcaggttggaggttgggggccggagtgtttcgtgttggtggagg 233  Q
     || |||||||| ||||||||||| |||||||  |||| ||||||||| |||||||||||||||||||||||||||||||| ||||| |||||||||  |    
T  34481575 agacagaggtgggttgtggtatagggttttagccgccaggtatggcgagttaggtggcaggttggaggttgggggccggagagtttcttgttggtggttg 34481476  T
Q  234 gaggtgagtcgtcttaggg 252  Q
    |||||||||||||||||||    
T  34481475 gaggtgagtcgtcttaggg 34481457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 48 - 242
Target Start/End: Complemental strand, 588220 - 588033
Alignment:
Q  48 aaaaaggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaatggtgttggcggatgctggtggatagaggtggtt 147  Q
    |||||||| |||||||||||| ||||||||||||||||||||||||| | | || | ||||| || ||||||||| |||||||||| |||||| ||||||    
T  588220 aaaaaggaatatggaggtttgagggtgagacagttgaaggagtttaacacttctatgttaggaaagtggtgttggaggatgctggttgatagatgtggtt 588121  T
Q  148 tgtggtatagagttttagttgccaagtatggcgaattaggtggcaggttggaggttgggggccggagtgtttcgtgttggtggagggaggtgagt 242  Q
    | |||||||| || ||||||||||  ||||||||||||| ||       |||||||||| ||| ||||| ||| |||||||||| ||||||||||    
T  588120 tatggtatagggtgttagttgccagatatggcgaattagatg-------ggaggttgggcgccagagtggttcttgttggtggaaggaggtgagt 588033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 53 - 239
Target Start/End: Original strand, 20208152 - 20208337
Alignment:
Q  53 ggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaatggtgttggcggatgctggtggatagaggtggtttgtgg 152  Q
    ||||| ||| ||||||||||||||||||||||  ||||| |||   ||||| ||||| || ||||||||| ||||||| || |||||  ||||||| |||    
T  20208152 ggagtttggtggtttgggggtgagacagttgagagagttcaatttggctttgttaggaaagtggtgttggaggatgctagtagataggagtggtttttgg 20208251  T
Q  153 tatagagttttagttgccaagtatggcgaattaggtggcaggttggaggttgggggccggagtgtttcgtgttggtggagggaggtg 239  Q
    ||| |||| ||||| |||  |||||||||| ||||||| ||||||||||||||||||||||||  ||||| ||||||||||||||||    
T  20208252 tatcgagtcttagtcgccc-gtatggcgaagtaggtgggaggttggaggttgggggccggagttgttcgttttggtggagggaggtg 20208337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 317 - 486
Target Start/End: Complemental strand, 34481379 - 34481210
Alignment:
Q  317 gttttggtttgataggtggttaggggatgttcctttttgtgtccgttttagtagactgttagagttaacagagaataagttcatgtctgtggcaaacttg 416  Q
    ||||||||  ||||||||||||||||| |||||| |||||||  | |||||| |  |||| |||||||||||||||||||  |||||||||||| | |||    
T  34481379 gttttggtccgataggtggttaggggaggttcctctttgtgtgaggtttagtcggttgtttgagttaacagagaataagtctatgtctgtggcatatttg 34481280  T
Q  417 ttctctgttgattcggagcagcggggggttatgtggaggtggagacgtcgtttgtggcagtgggaggagg 486  Q
     |||||||||||||||||| | ||||||   ||||||||||||||||| | || ||||||||||||||||    
T  34481279 ctctctgttgattcggagcggtggggggaagtgtggaggtggagacgtaggttatggcagtgggaggagg 34481210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 49 - 211
Target Start/End: Original strand, 22094678 - 22094840
Alignment:
Q  49 aaaaggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaatggtgttggcggatgctggtggatagaggtggttt 148  Q
    ||||||||| |||||| || ||||| |||||||||||||||||||||| ||||||  ||||||| ||||||||| ||||| | |||||||| ||||||||    
T  22094678 aaaaggagtttggagggttaggggttagacagttgaaggagtttaatattgctttactagggaagtggtgttggaggatgttagtggataggggtggttt 22094777  T
Q  149 gtggtatagagttttagttgccaagtatggcgaattaggtggcaggttggaggttgggggccg 211  Q
     ||||||||||||||||| ||    ||||||||  |  |||| |||||||||| |||||||||    
T  22094778 ttggtatagagttttagtcgctcgttatggcgaggtttgtgggaggttggaggatgggggccg 22094840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 42 - 238
Target Start/End: Complemental strand, 38358186 - 38357990
Alignment:
Q  42 tgttccaaaaaggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaatggtgttggcggatgctggtggatagag 141  Q
    ||||| |||||||||| ||||||||||||||| ||    |||||||||||||||| ||||||  |||| |||||||||||| ||||| | || |||||||    
T  38358186 tgttctaaaaaggagtttggaggtttgggggttaggagattgaaggagtttaatattgctttactaggtaaatggtgttggaggatgttagttgatagag 38358087  T
Q  142 gtggtttgtggtat-agagttttagttgccaagtatggcgaattaggtggcaggttggaggttgggggccggagtgtttcgtgttggtggagggaggt 238  Q
      |  ||||||||| ||| ||||||| |||   ||||||||| ||||||| ||||||||||| ||||||||||||||||| |  |||||| |||||||    
T  38358086 aagagttgtggtatcaga-ttttagtcgcccgttatggcgaagtaggtgggaggttggaggtggggggccggagtgtttccttgtggtggcgggaggt 38357990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 14 - 238
Target Start/End: Original strand, 35122099 - 35122323
Alignment:
Q  14 aattagttggataggatggaaaactgtttgttccaaaaaggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaa 113  Q
    ||||| ||||||||  ||||| ||||| ||||| |||||||||| |||||| |||||||| ||   ||||| | ||||||||  ||| ||  ||||||||    
T  35122099 aattacttggatagattggaatactgtatgttctaaaaaggagtctggagggttgggggttaggaggttgaggaagtttaatgttgcattactagggaaa 35122198  T
Q  114 tggtgttggcggatgctggtggatagaggtggtttgtggtatagagttttagttgccaagtatggcgaattaggtggcaggttggaggttgggggccgga 213  Q
    ||||||||| ||||| | ||||||||||  || |||||||||   |||||||| |||   ||||||||| ||||||| ||||||||||| ||||||| ||    
T  35122199 tggtgttggaggatgttagtggatagagaaggattgtggtatcaggttttagtcgcccgttatggcgaaataggtggaaggttggaggtggggggccaga 35122298  T
Q  214 gtgtttcgtgttggtggagggaggt 238  Q
    ||  ||| | ||||||| |||||||    
T  35122299 gttgttcttcttggtggcgggaggt 35122323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 51 - 157
Target Start/End: Complemental strand, 380611 - 380505
Alignment:
Q  51 aaggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaatggtgttggcggatgctggtggatagaggtggtttgt 150  Q
    ||||||||||||||||||||||| || ||||||| ||||||||||| ||  ||  |||| |||||||||||||||||| |||||||||||| |||||| |    
T  380611 aaggagtatggaggtttgggggtcaggcagttgagggagtttaatagtgtcttactaggcaaatggtgttggcggatgttggtggatagagatggtttct 380512  T
Q  151 ggtatag 157  Q
    |||||||    
T  380511 ggtatag 380505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 8 - 238
Target Start/End: Original strand, 30509434 - 30509664
Alignment:
Q  8 taggataattagttggataggatggaaaactgtttgttccaaaaaggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttctta 107  Q
    ||||| ||||| ||||||||  ||||| ||||||||||| ||||||||||  ||||| |||||||| ||  |||||||||| ||||||   |||||  ||    
T  30509434 taggaaaattacttggatagattggaatactgtttgttctaaaaaggagttaggagggttgggggttaggaagttgaaggaatttaatgtagctttgcta 30509533  T
Q  108 gggaaatggtgttggcggatgctggtggatagaggtggtttgtggtatagagttttagttgccaagtatggcgaattaggtggcaggttggaggttgggg 207  Q
    ||||||||||||||| || || | || ||||||| ||| |||||||||   |||||||| |||   ||||||||  | ||||| || |||||||| ||||    
T  30509534 gggaaatggtgttggaggttgttagtagatagagatggcttgtggtatcaggttttagtcgcccgttatggcgagatcggtgggagattggaggtggggg 30509633  T
Q  208 gccggagtgtttcgtgttggtggagggaggt 238  Q
    ||||||||  ||| | ||||||| |||||||    
T  30509634 gccggagttgttcttcttggtggcgggaggt 30509664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 8 - 238
Target Start/End: Original strand, 30549774 - 30550004
Alignment:
Q  8 taggataattagttggataggatggaaaactgtttgttccaaaaaggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttctta 107  Q
    ||||| ||||| ||||||||  ||||| ||||||||||| ||||||||||  ||||| |||||||| ||  |||||||||| ||||||   |||||  ||    
T  30549774 taggaaaattacttggatagattggaatactgtttgttctaaaaaggagttaggagggttgggggttaggaagttgaaggaatttaatgtagctttgcta 30549873  T
Q  108 gggaaatggtgttggcggatgctggtggatagaggtggtttgtggtatagagttttagttgccaagtatggcgaattaggtggcaggttggaggttgggg 207  Q
    ||||||||||||||| || || | || ||||||| ||| |||||||||   |||||||| |||   ||||||||  | ||||| || |||||||| ||||    
T  30549874 gggaaatggtgttggaggttgttagtagatagagatggcttgtggtatcaggttttagtcgcccgttatggcgagatcggtgggagattggaggtggggg 30549973  T
Q  208 gccggagtgtttcgtgttggtggagggaggt 238  Q
    ||||||||  ||| | ||||||| |||||||    
T  30549974 gccggagttgttcttcttggtggcgggaggt 30550004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 14 - 198
Target Start/End: Complemental strand, 31864536 - 31864352
Alignment:
Q  14 aattagttggataggatggaaaactgtttgttccaaaaaggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaa 113  Q
    ||||| ||||||||| ||||| ||||| ||||  ||||||| |||||||||  || ||||| |||| |||||||||||||||| || | | || || |||    
T  31864536 aattacttggataggttggaatactgtgtgttaaaaaaaggtgtatggagggctgagggtgggacaattgaaggagtttaatattgttatgttgggtaaa 31864437  T
Q  114 tggtgttggcggatgctggtggatagaggtggtttgtggtatagagttttagttgccaagtatggcgaattaggtggcaggttgg 198  Q
    ||||||||| ||||| | ||||||||||| || || |||||||| |||||| |  |||  ||||||||| ||||||| |||||||    
T  31864436 tggtgttggaggatgttagtggatagaggaggcttatggtatagtgttttaatcaccagctatggcgaaataggtgggaggttgg 31864352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 51 - 156
Target Start/End: Complemental strand, 42259990 - 42259885
Alignment:
Q  51 aaggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaatggtgttggcggatgctggtggatagaggtggtttgt 150  Q
    ||||||||||||||| |||||||||||||||||  | |||||||||  || || ||||| ||||||||||| |||||| |||||||||||||||| || |    
T  42259990 aaggagtatggaggtctgggggtgagacagttggcgaagtttaatatagccttgttaggtaaatggtgttgacggatgttggtggatagaggtgggtttt 42259891  T
Q  151 ggtata 156  Q
    ||||||    
T  42259890 ggtata 42259885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 14 - 198
Target Start/End: Complemental strand, 31864981 - 31864797
Alignment:
Q  14 aattagttggataggatggaaaactgtttgttccaaaaaggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaa 113  Q
    ||||| ||| ||||| ||||| || || ||||  ||||||| |||||||||  || ||||| |||| |||||||||||||||| |  | | ||||| |||    
T  31864981 aattacttgaataggttggaataccgtgtgttaaaaaaaggtgtatggagggctgagggtgggacaattgaaggagtttaatattattatgttaggtaaa 31864882  T
Q  114 tggtgttggcggatgctggtggatagaggtggtttgtggtatagagttttagttgccaagtatggcgaattaggtggcaggttgg 198  Q
    ||||||||| ||||| | ||||||||||| || || |||||||| |||||| |  |||  ||||||||| ||||||| |||||||    
T  31864881 tggtgttggaggatgttagtggatagaggaggcttatggtatagggttttaatcaccagctatggcgaaataggtgggaggttgg 31864797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 53 - 198
Target Start/End: Original strand, 7000219 - 7000364
Alignment:
Q  53 ggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaatggtgttggcggatgctggtggatagaggtggtttgtgg 152  Q
    ||||| ||||||||||||||||||||||||||| || ||||||    |||| ||||| || ||||||||| ||||||| || |||||  |||| || |||    
T  7000219 ggagtttggaggtttgggggtgagacagttgaaagaatttaatttgcctttgttaggtaagtggtgttggaggatgctagttgataggagtggcttttgg 7000318  T
Q  153 tatagagttttagttgccaagtatggcgaattaggtggcaggttgg 198  Q
    ||| |||| ||||| |||   ||||||||| ||||||| |||||||    
T  7000319 tatcgagtcttagtcgcccgttatggcgaagtaggtgggaggttgg 7000364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 14 - 238
Target Start/End: Complemental strand, 6867111 - 6866887
Alignment:
Q  14 aattagttggataggatggaaaactgtttgttccaaaaaggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaa 113  Q
    ||||| ||||||||| ||||| ||  | ||||| ||||||||| ||| |||||||||||| ||  |||||||||| ||||||  | ||||  |||| |||    
T  6867111 aattacttggataggttggaatacattgtgttctaaaaaggagcatgtaggtttgggggtaaggaagttgaaggaatttaatgttcctttactaggtaaa 6867012  T
Q  114 tggtgttggcggatgctggtggatagaggtggtttgtggtatagagttttagttgccaagtatggcgaattaggtggcaggttggaggttgggggccgga 213  Q
    |||||| || ||||| | ||  ||||||  |  |||||||||   |||||||| |||   ||||||||| ||||||| ||||||||||| ||||||| ||    
T  6867011 tggtgtcggaggatgttagtttatagagaagagttgtggtatcatgttttagtcgcccgttatggcgaagtaggtgggaggttggaggtggggggccaga 6866912  T
Q  214 gtgtttcgtgttggtggagggaggt 238  Q
    ||| ||| |  |||||| |||||||    
T  6866911 gtggttcttcgtggtggcgggaggt 6866887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 69 - 160
Target Start/End: Original strand, 22174442 - 22174533
Alignment:
Q  69 ggggtgagacagttgaaggagtttaataatgctttcttagggaaatggtgttggcggatgctggtggatagaggtggtttgtggtatagagt 160  Q
    |||||||| ||||||||||||||||| |  ||||| ||||| | |||||||||| || || |||||||||||||||| || |||||||||||    
T  22174442 ggggtgaggcagttgaaggagtttaacatagctttgttaggtagatggtgttggaggttgttggtggatagaggtgggttatggtatagagt 22174533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 105 - 238
Target Start/End: Original strand, 19512949 - 19513082
Alignment:
Q  105 ttagggaaatggtgttggcggatgctggtggatagaggtggtttgtggtatagagttttagttgccaagtatggcgaattaggtggcaggttggaggttg 204  Q
    ||||| |||||||||||| ||||| |||| |||| ||  |||||||||||||| ||| | || |||   ||||||||  | ||||| ||||||||||| |    
T  19512949 ttaggtaaatggtgttggaggatgttggtcgataaagtaggtttgtggtatagtgttcttgtcgcccgttatggcgaggttggtgggaggttggaggtgg 19513048  T
Q  205 ggggccggagtgtttcgtgttggtggagggaggt 238  Q
    |||||||||||  ||| | |||||||||||||||    
T  19513049 ggggccggagttgttcttcttggtggagggaggt 19513082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 86 - 157
Target Start/End: Complemental strand, 476888 - 476817
Alignment:
Q  86 ggagtttaataatgctttcttagggaaatggtgttggcggatgctggtggatagaggtggtttgtggtatag 157  Q
    ||||||||||| |||||| ||||| |||||||||||||| ||| |||| ||||||| |||||| ||||||||    
T  476888 ggagtttaatagtgctttgttaggtaaatggtgttggcgaatgttggtagatagagatggtttttggtatag 476817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 192 - 234
Target Start/End: Complemental strand, 34338453 - 34338411
Alignment:
Q  192 aggttggaggttgggggccggagtgtttcgtgttggtggaggg 234  Q
    ||||||||||||||||||||||||||||| | |||||||||||    
T  34338453 aggttggaggttgggggccggagtgtttcttcttggtggaggg 34338411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 36 - 96
Target Start/End: Complemental strand, 29323618 - 29323558
Alignment:
Q  36 actgtttgttccaaaaaggagtatggaggtttgggggtgagacagttgaaggagtttaata 96  Q
    ||||||||||  |||| |||| |||||||||||||||||| || ||||||||| |||||||    
T  29323618 actgtttgtttgaaaagggagaatggaggtttgggggtgaaacggttgaaggaatttaata 29323558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 53 - 152
Target Start/End: Complemental strand, 10780909 - 10780810
Alignment:
Q  53 ggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaatggtgttggcggatgctggtggatagaggtggtttgtgg 152  Q
    |||||||||||| ||||| |||||   |||||  |||||||| | |||||| || |||||||||||||||||| || | || ||||| || |||||||||    
T  10780909 ggagtatggagggttgggtgtgaggaggttgagagagtttaacattgctttgttggggaaatggtgttggcggctgttagttgataggggaggtttgtgg 10780810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 30 - 157
Target Start/End: Original strand, 26262285 - 26262412
Alignment:
Q  30 tggaaaactgtttgttccaaaaaggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaatggtgttggcggatgc 129  Q
    |||||| |||||||||  | |||||| |||| ||| ||| || | ||| || ||| ||||||||||| |||||| ||||| |||||||||||| |||||     
T  26262285 tggaaagctgtttgtttaagaaaggaatatgaagggttgaggttaagagagatgagggagtttaatactgctttgttaggaaaatggtgttggaggatgt 26262384  T
Q  130 tggtggatagaggtggtttgtggtatag 157  Q
    | ||  ||||||  ||||| ||||||||    
T  26262385 tagtaaatagagtaggtttttggtatag 26262412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 6 - 94
Target Start/End: Original strand, 26261702 - 26261790
Alignment:
Q  6 cataggataattagttggataggatggaaaactgtttgttccaaaaaggagtatggaggtttgggggtgagacagttgaaggagtttaa 94  Q
    ||||||| ||||  |||||| || ||||||||||||||||  | ||| ||||||||| | |||||||| || ||| ||| |||||||||    
T  26261702 cataggaaaatttcttggattggttggaaaactgtttgtttaagaaaagagtatggatggttgggggtaaggcagatgagggagtttaa 26261790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 50 - 154
Target Start/End: Complemental strand, 35637845 - 35637742
Alignment:
Q  50 aaaggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaatggtgttggcggatgctggtggatagaggtggtttg 149  Q
    ||||||| |||||||||| |||||||| || |||| |||||| |||  ||| || ||||| || ||||||||| || || |||| |||||||| |||||     
T  35637845 aaaggagcatggaggttt-ggggtgaggcaattgagggagttaaattttgcattattaggaaagtggtgttggaggttgttggttgatagaggaggttta 35637747  T
Q  150 tggta 154  Q
    |||||    
T  35637746 tggta 35637742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 345; Significance: 0; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 345; E-Value: 0
Query Start/End: Original strand, 6 - 485
Target Start/End: Original strand, 3129374 - 3129858
Alignment:
Q  6 cataggataattagttggataggatggaaaactgtttgttccaaaaaggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttct 105  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || ||||||||||||||||||| |    
T  3129374 cataggaaaattagttggataggatggaaaactgtttgttccaaaaaggagcatggaggtttgggggtgagacagctgcaggagtttaataatgctttgt 3129473  T
Q  106 tagggaaatggtgttggcggatgctggtggatagaggtggtttgtggtatagagttttagttgccaagtatggcgaattaggtggcaggttggaggttgg 205  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||| || |||||||||||||||||||       |||||||    
T  3129474 tagggaaatggtgttggcggatgttggtggatagaggtggtttgtggtatagggttttagttgtcaggtatggcgaattaggtggc-------aggttgg 3129566  T
Q  206 gggccggagtgtttcgtgttggtggagggaggtgagtcgtcttaggggtagtgatggtgatggagagggcggctggtttgttgatcgtgtggctagcagg 305  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||    
T  3129567 gggccggagtgtttcgtgttggtggagggaggtgagtcgttttaggggtagtgatggtgatggagagggcggctggtttgttgatcatgtggctaggagg 3129666  T
Q  306 gttggagat------------ttgttttggtttgataggtggttaggggatgttcctttttgtgtccgttttagtagactgttagagttaacagagaata 393  Q
    |||||||||            ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  3129667 gttggagatggagctgatacattgttttggtttggtaggtggttaggggatgttcctttttgtgtccgttttagtagactgtttgagttaacagagaata 3129766  T
Q  394 agttcatgtctgtggcaaacttgttctctgttgattcggagcagcggggggttatgtggaggtggagacgtcgtttgtggcagtgggaggag 485  Q
    ||||||||||||||||| ||||||||||| |||||||||||||||  ||||||| |||||||||||||||| ||||||||||||||||||||    
T  3129767 agttcatgtctgtggcagacttgttctctattgattcggagcagctaggggttacgtggaggtggagacgttgtttgtggcagtgggaggag 3129858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 165; E-Value: 5e-88
Query Start/End: Original strand, 14 - 265
Target Start/End: Original strand, 7662701 - 7662953
Alignment:
Q  14 aattagttggataggatggaaaactgtttgttccaaaaaggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaa 113  Q
    ||||| ||||||||| ||||||| ||||||||||| ||||||| ||||||||||||||||||||||||||||||| ||||||| |||||| ||||| |||    
T  7662701 aattacttggataggctggaaaattgtttgttccacaaaggagaatggaggtttgggggtgagacagttgaaggaatttaatagtgctttgttaggtaaa 7662800  T
Q  114 tggtgttggcggatgctggtggatagaggtggtttgtggtatagagttttagttgccaagtatggcgaattaggtggcaggttggaggtt-gggggccgg 212  Q
    ||||||||||||||| ||||||| |||||||||||||||||||| || |||||||| | ||||||||||||||||||||| ||||||||| |||||||||    
T  7662801 tggtgttggcggatgttggtggacagaggtggtttgtggtatagtgtcttagttgctaggtatggcgaattaggtggcagattggaggttcgggggccgg 7662900  T
Q  213 agtgtttcgtgttggtggagggaggtgagtcgtcttaggggtagtgatggtga 265  Q
    |||||||||||||||||| |||||||||||||| |||||| ||||| ||||||    
T  7662901 agtgtttcgtgttggtggggggaggtgagtcgtattagggatagtggtggtga 7662953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 315 - 495
Target Start/End: Complemental strand, 47541359 - 47541179
Alignment:
Q  315 ttgttttggtttgataggtggttaggggatgttcctttttgtgtccgttttagtagactgttagagttaacagagaataagttcatgtctgtggcaaact 414  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||| ||||||||||||||||||||||||||||||||| |||    
T  47541359 ttgttttggtttgataggtggttaggggatgttcctttttgtgttcgtttttgtagactgtttgagttaacagagaataagttcatgtctgtggcagact 47541260  T
Q  415 tgttctctgttgattcggagcagcggggggttatgtggaggtggagacgtcgtttgtggcagtgggaggaggagatgttag 495  Q
    |||| ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  47541259 tgttttctgttgattcggagcagccgggagttatgtggaggtggagacgtcgtttgtggcagtggaaggaggagatgttag 47541179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 245 - 487
Target Start/End: Original strand, 8654697 - 8654951
Alignment:
Q  245 tcttaggggtagtgatggtgatggagagggcggctggtttgttgatcgtgtggctagcagggttggagat------------ttgttttggtttgatagg 332  Q
    |||||||||||||| ||||| ||||||| | || ||||||| ||||| ||||||||| ||||||||||||            ||||||||||| ||||||    
T  8654697 tcttaggggtagtgttggtgctggagagagtggatggtttggtgatcttgtggctaggagggttggagatggagctaatacgttgttttggttggatagg 8654796  T
Q  333 tggttaggggatgttcctttttgtgtccgttttagtagactgttagagttaacagagaataagttcatgtctgtggcaaacttgttctctgttgattcgg 432  Q
    ||||||||||||||||||||||||||||||||  |||| ||||| |||||||||||||||||||| |||||||||||| ||||||| |||||||||||||    
T  8654797 tggttaggggatgttcctttttgtgtccgtttccgtaggctgtttgagttaacagagaataagtttatgtctgtggcagacttgttatctgttgattcgg 8654896  T
Q  433 agcagcggggggttatgtggaggtggagacgtcgtttgtggcagtgggaggagga 487  Q
    ||||| |||||||| ||||||||||||||||| | ||||||||||||||||||||    
T  8654897 agcagtggggggttttgtggaggtggagacgtaggttgtggcagtgggaggagga 8654951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 34 - 252
Target Start/End: Complemental strand, 55299339 - 55299121
Alignment:
Q  34 aaactgtttgttccaaaaaggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaatggtgttggcggatgctggt 133  Q
    ||||||||||||  |||||||||| ||| |||||||||||| |  | |||||||||||||||   ||||| ||||| |||||||||||||||||| ||||    
T  55299339 aaactgtttgtttaaaaaaggagtgtggcggtttgggggtgcggaaattgaaggagtttaatttagctttgttaggaaaatggtgttggcggatgttggt 55299240  T
Q  134 ggatagaggtggtttgtggtatagagttttagttgccaagtatggcgaattaggtggcaggttggaggttgggggccggagtgtttcgtgttggtggagg 233  Q
    |||||||||||||||||||||| | |||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| || ||||||  |    
T  55299239 ggatagaggtggtttgtggtatcgggttttagtcgccaggtatggcgaattaggtggcaggttggaggttgggggccggagtgtttcttgctggtggtcg 55299140  T
Q  234 gaggtgagtcgtcttaggg 252  Q
    |||||||| ||||||||||    
T  55299139 gaggtgaggcgtcttaggg 55299121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 48 - 488
Target Start/End: Complemental strand, 2632111 - 2631659
Alignment:
Q  48 aaaaaggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaatggtgttggcggatgctggtggatagaggtggtt 147  Q
    |||||||||| |||||||||||||||| |  | |||||||||||||||   | ||| |||||||||||||||||||||||| ||||||| |  |||||||    
T  2632111 aaaaaggagtttggaggtttgggggtgcggaaattgaaggagtttaatttagttttgttagggaaatggtgttggcggatgttggtggacaagggtggtt 2632012  T
Q  148 tgtggtatagagttttagttgccaagtatggcgaattaggtggcaggttggaggttgggggccggagtgtttcgtgttggtggagggaggtgagtcgtct 247  Q
    |||||||||| ||||||||||||| ||||||||||||||||||||||||||||||| ||||||| || ||||| || ||||||  ||||||||| ||  |    
T  2632011 tgtggtatagggttttagttgccaggtatggcgaattaggtggcaggttggaggttaggggccgaagagtttcttgctggtggtcggaggtgaggcgatt 2631912  T
Q  248 taggggtagtgatggtgatggagagggcggctggtttgttgatcgtgtggctagcagggttggagat----ttg--------ttttggtttgataggtgg 335  Q
    |||||  || |  |||||||| |   |||| |||||||  ||||  |||   || || ||||| |||    |||        ||||||| ||||||||||    
T  2631911 tagggacagggtaggtgatggtggtagcgggtggtttgaggatcaggtgatgaggagagttggtgatggggttgacacttcattttggtctgataggtgg 2631812  T
Q  336 ttaggggatgttcctttttgtgtccgttttagtagactgttagagttaacagagaataagttcatgtctgtggcaaacttgttctctgttgattcggagc 435  Q
     ||||||| | |||| ||||||| || |||||  |  |||| |||||||||||||||||||  |||||||||||  ||||| ||||||||||||||||||    
T  2631811 ataggggaggctcctctttgtgtgcggtttaggcggttgtttgagttaacagagaataagtctatgtctgtggccgacttgctctctgttgattcggagc 2631712  T
Q  436 agcggggggttatgtggaggtggagacgtcgtttgtggcagtgggaggaggag 488  Q
     | ||||||   ||||||||||||||||| | || ||||||||||||||||||    
T  2631711 ggtggggggaggtgtggaggtggagacgtaggttatggcagtgggaggaggag 2631659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 34 - 252
Target Start/End: Original strand, 23872889 - 23873107
Alignment:
Q  34 aaactgtttgttccaaaaaggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaatggtgttggcggatgctggt 133  Q
    ||||||||||||  |||||||||||||| |||||||||||  |  | |||||||||||||||   ||||| ||||| |||||||||||||||||| ||||    
T  23872889 aaactgtttgtttaaaaaaggagtatggcggtttgggggtacggaaattgaaggagtttaatttagctttgttaggaaaatggtgttggcggatgttggt 23872988  T
Q  134 ggatagaggtggtttgtggtatagagttttagttgccaagtatggcgaattaggtggcaggttggaggttgggggccggagtgtttcgtgttggtggagg 233  Q
     ||||||||||||||||||||| | |||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| || ||||||  |    
T  23872989 agatagaggtggtttgtggtatcgggttttagtcgccaggtatggcgaattaggtggcaggttggaggttgggggccggagtgtttcttgctggtggtcg 23873088  T
Q  234 gaggtgagtcgtcttaggg 252  Q
    |||||||| ||||||||||    
T  23873089 gaggtgaggcgtcttaggg 23873107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 34 - 488
Target Start/End: Complemental strand, 20675749 - 20675283
Alignment:
Q  34 aaactgtttgttccaaaaaggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaatggtgttggcggatgctggt 133  Q
    ||||||||||||  ||||| |||| ||| |||||||||||| |  | |||||||||||||||   ||||| ||||| |||||||||||||||||| ||||    
T  20675749 aaactgtttgtttaaaaaaagagtttggtggtttgggggtgcggaaattgaaggagtttaatttagctttgttaggaaaatggtgttggcggatgttggt 20675650  T
Q  134 ggatagaggtggtttgtggtatagagttttagttgccaagtatggcgaattaggtggcaggttggaggttgggggccggagtgtttcgtgttggtggagg 233  Q
    ||| |||||||||||||||||||| |||||||| |||| |||||||||| |||||||||||||||||||||||||||| || ||||| || ||||||  |    
T  20675649 ggacagaggtggtttgtggtatagggttttagtcgccaggtatggcgaaataggtggcaggttggaggttgggggccgaagagtttcttgctggtggtcg 20675550  T
Q  234 gaggtgagtcgtcttaggggtagtgatggtgatggagagggcggctggtttgttgatcgtgtggctagcagggttggaga------------tttgtttt 321  Q
    |||||||| || ||||||| ||| |  || ||||| |   |||| |||||||  ||||  |||   || || ||||| ||            || |||||    
T  20675549 gaggtgaggcgacttagggatagggtaggcgatggtggtagcgggtggtttgaggatcaggtgttgaggagagttggtgatggggttgacacttcgtttt 20675450  T
Q  322 ggtttgataggtggttaggggatgttcctttttgtgtccgttttagtagactgttagagttaacagagaataagttcatgtctgtggcaaacttgttctc 421  Q
    ||| |||||||||||||||||| | |||| ||||||| || |||||  |  |||| |||||||||||||||||||  || || |||||  ||||| |||     
T  20675449 ggtctgataggtggttaggggaggctcctctttgtgtgcggtttaggcggttgtttgagttaacagagaataagtctatatccgtggccgacttgctctt 20675350  T
Q  422 tgttgattcggagcagcggggggttatgtggaggtggagacgtcgtttgtggcagtgggaggaggag 488  Q
    |||||||||||||| | ||||||   ||||||||||||||||| | || ||||||||||||||||||    
T  20675349 tgttgattcggagcggtggggggaggtgtggaggtggagacgtaggttatggcagtgggaggaggag 20675283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 336 - 498
Target Start/End: Original strand, 7662966 - 7663128
Alignment:
Q  336 ttaggggatgttcctttttgtgtccgttttagtagactgttagagttaacagagaataagttcatgtctgtggcaaacttgttctctgttgattcggagc 435  Q
    |||||||||||||| || |||||||||||| ||||| |||| ||||||| |||||||||| |||||||| ||||| |||||||||||||||||| |||||    
T  7662966 ttaggggatgttccgttctgtgtccgttttcgtagattgtttgagttaatagagaataagctcatgtctatggcagacttgttctctgttgatttggagc 7663065  T
Q  436 agcggggggttatgtggaggtggagacgtcgtttgtggcagtgggaggaggagatgttagtgg 498  Q
    ||| |||| || | ||||||||||| ||| | |||||||||||||||||||||||||||||||    
T  7663066 agcaggggtttttttggaggtggaggcgtagattgtggcagtgggaggaggagatgttagtgg 7663128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 49 - 238
Target Start/End: Complemental strand, 19115148 - 19114959
Alignment:
Q  49 aaaaggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaatggtgttggcggatgctggtggatagaggtggttt 148  Q
    ||||||||| |||||| || ||||| |||||||||||||||||||||| |||||| |||||||||||||||||| || || | |||||||| ||||| ||    
T  19115148 aaaaggagtttggagggttaggggttagacagttgaaggagtttaatattgctttattagggaaatggtgttggaggttgttagtggataggggtggatt 19115049  T
Q  149 gtggtatagagttttagttgccaagtatggcgaattaggtggcaggttggaggttgggggccggagtgtttcgtgttggtggagggaggt 238  Q
     ||||||||||||||||| ||    ||||||||| || |||| ||||||||||||||||||| ||||  ||| | ||||||| |||||||    
T  19115048 ttggtatagagttttagtcgctcgttatggcgaagtatgtgggaggttggaggttgggggccagagttgttcttcttggtggcgggaggt 19114959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 49 - 239
Target Start/End: Complemental strand, 8935786 - 8935596
Alignment:
Q  49 aaaaggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaatggtgttggcggatgctggtggatagaggtggttt 148  Q
    ||||||||| |||||| || ||||| |||||||||||||||||||||| ||| ||  ||||||||||||||||| ||||| | |||||||| ||||||||    
T  8935786 aaaaggagtttggagggttaggggttagacagttgaaggagtttaatattgccttactagggaaatggtgttggaggatgttagtggataggggtggttt 8935687  T
Q  149 gtggtatagagttttagttgccaagtatggcgaattaggtggcaggttggaggttgggggccggagtgtttcgtgttggtggagggaggtg 239  Q
     ||||||||||||||||| ||    ||||||||  |  |||| |||||||||| |||||||||||||  ||| | ||||||| ||||||||    
T  8935686 ttggtatagagttttagtcgctcgttatggcgaggtgtgtgggaggttggaggatgggggccggagttgttcttcttggtggcgggaggtg 8935596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 53 - 238
Target Start/End: Original strand, 10562765 - 10562950
Alignment:
Q  53 ggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaatggtgttggcggatgctggtggatagaggtggtttgtgg 152  Q
    ||||| ||||||||||||||||||||||||||| || ||||||   ||||| ||||| || ||||||||| ||||||| || |||||  |||| || |||    
T  10562765 ggagtttggaggtttgggggtgagacagttgaaagaatttaatttggctttgttaggaaagtggtgttggaggatgctagtagataggagtggcttttgg 10562864  T
Q  153 tatagagttttagttgccaagtatggcgaattaggtggcaggttggaggttgggggccggagtgtttcgtgttggtggagggaggt 238  Q
    ||| |||| ||||| |||   ||||||||| ||||||| ||||||||||||||||||| ||||  ||| | |||||||||||||||    
T  10562865 tatcgagtcttagtcgcccgttatggcgaagtaggtgggaggttggaggttgggggccagagttgttcttcttggtggagggaggt 10562950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 14 - 238
Target Start/End: Complemental strand, 26694675 - 26694451
Alignment:
Q  14 aattagttggataggatggaaaactgtttgttccaaaaaggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaa 113  Q
    ||||| ||||||||| ||| | ||| | ||||| |||||| ||||||||||||||||||||||    |||||||||||||||| ||||||  |||| |||    
T  26694675 aattacttggataggttgggatactttgtgttctaaaaagaagtatggaggtttgggggtgaggagattgaaggagtttaatattgctttactaggtaaa 26694576  T
Q  114 tggtgttggcggatgctggtggatagaggtggtttgtggtatagagttttagttgccaagtatggcgaattaggtggcaggttggaggttgggggccgga 213  Q
    ||||||||| ||||| | ||||||||||  || ||| |||||   |||||||| | |   ||||||||| ||| ||| ||||||||||| |||||| |||    
T  26694575 tggtgttggaggatgttagtggatagagtagggttgcggtatcaggttttagtcgtccgttatggcgaagtagatgggaggttggaggtggggggctgga 26694476  T
Q  214 gtgtttcgtgttggtggagggaggt 238  Q
    ||||||| |  |||||| |||||||    
T  26694475 gtgtttctttgtggtggcgggaggt 26694451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 75 - 241
Target Start/End: Complemental strand, 23657983 - 23657817
Alignment:
Q  75 agacagttgaaggagtttaataatgctttcttagggaaatggtgttggcggatgctggtggatagaggtggtttgtggtatagagttttagttgccaagt 174  Q
    |||||||||||||||||||||| ||| ||  ||||||||||||||||  ||||| | |||||||| |||||||| ||||||||||||||||| |||   |    
T  23657983 agacagttgaaggagtttaatattgccttactagggaaatggtgttgaaggatgttagtggataggggtggtttttggtatagagttttagtcgcccgtt 23657884  T
Q  175 atggcgaattaggtggcaggttggaggttgggggccggagtgtttcgtgttggtggagggaggtgag 241  Q
    || ||||  |  |||| |||||||||| ||||||||| |||  ||| | ||||||| ||||||||||    
T  23657883 atagcgaggtgtgtgggaggttggaggatgggggccgaagttgttcttcttggtggcgggaggtgag 23657817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 51 - 157
Target Start/End: Original strand, 43516178 - 43516284
Alignment:
Q  51 aaggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaatggtgttggcggatgctggtggatagaggtggtttgt 150  Q
    |||||||||||||| |||||||||||  ||||| |||| ||||||| |||||| ||||| ||||||||||||| |||| ||| ||||||||||||||| |    
T  43516178 aaggagtatggagggttgggggtgaggaagttgcaggaatttaatagtgctttgttaggtaaatggtgttggcagatgttggcggatagaggtggtttat 43516277  T
Q  151 ggtatag 157  Q
    |||||||    
T  43516278 ggtatag 43516284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 53 - 236
Target Start/End: Complemental strand, 42778946 - 42778763
Alignment:
Q  53 ggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaatggtgttggcggatgctggtggatagaggtggtttgtgg 152  Q
    ||||| |||||||||||||||||||| |||||| || || |||   ||||| ||||| || ||||||||| |||||||  | |||||  |||| || |||    
T  42778946 ggagtttggaggtttgggggtgagacggttgaaagaattcaatttggctttattaggaaagtggtgttggaggatgctaattgataggagtggcttttgg 42778847  T
Q  153 tatagagttttagttgccaagtatggcgaattaggtggcaggttggaggttgggggccggagtgtttcgtgttggtggagggag 236  Q
    ||| |||| ||||| |||   ||||||||| |||| || ||||||||||||||||||||||||  ||| | |||||||||||||    
T  42778846 tatcgagtcttagtcgcccgttatggcgaagtaggcgggaggttggaggttgggggccggagttgttcttcttggtggagggag 42778763  T

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Target: chr4; HSP #17
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 373 - 488
Target Start/End: Complemental strand, 55298996 - 55298881
Alignment:
Q  373 tgttagagttaacagagaataagttcatgtctgtggcaaacttgttctctgttgattcggagcagcggggggttatgtggaggtggagacgtcgtttgtg 472  Q
    |||| |||||||||||||||||||  ||||| || ||  ||||| |||||||||||||||||| | ||||||   ||||||||||||||||| |||| ||    
T  55298996 tgtttgagttaacagagaataagtctatgtccgttgccgacttgctctctgttgattcggagcggtggggggaggtgtggaggtggagacgtagtttatg 55298897  T
Q  473 gcagtgggaggaggag 488  Q
    ||||||||||||||||    
T  55298896 gcagtgggaggaggag 55298881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 70 - 166
Target Start/End: Complemental strand, 19648393 - 19648297
Alignment:
Q  70 gggtgagacagttgaaggagtttaataatgctttcttagggaaatggtgttggcggatgctggtggatagaggtggtttgtggtatagagttttagt 166  Q
    |||| |||||||||||||||||||||  ||| ||  ||||||||||||||||| ||||| | |||||||| |||||||| |||||||||||||||||    
T  19648393 gggttagacagttgaaggagtttaatgttgccttactagggaaatggtgttggaggatgttagtggataggggtggtttttggtatagagttttagt 19648297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 317 - 488
Target Start/End: Original strand, 23873184 - 23873355
Alignment:
Q  317 gttttggtttgataggtggttaggggatgttcctttttgtgtccgttttagtagactgttagagttaacagagaataagttcatgtctgtggcaaacttg 416  Q
    |||||||| |||||||||| | ||||| | |||| | ||||| || |||||  |  |||| |||||||||||||||||||  ||||| || ||  |||||    
T  23873184 gttttggtctgataggtggattggggaggctcctctgtgtgtgcggtttaggcggttgtttgagttaacagagaataagtctatgtccgttgccgacttg 23873283  T
Q  417 ttctctgttgattcggagcagcggggggttatgtggaggtggagacgtcgtttgtggcagtgggaggaggag 488  Q
     |||||||||||||||||| | ||||||   ||||||||||||||||| | |  ||||||||||||||||||    
T  23873284 ctctctgttgattcggagcggtggggggaggtgtggaggtggagacgtaggtaatggcagtgggaggaggag 23873355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 51 - 215
Target Start/End: Complemental strand, 34975245 - 34975081
Alignment:
Q  51 aaggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaatggtgttggcggatgctggtggatagaggtggtttgt 150  Q
    ||||||| |||||||||||||||||||||||||||||| ||||||    |||| || || |||||||||||| |||| || || |||||  |||| || |    
T  34975245 aaggagtttggaggtttgggggtgagacagttgaaggaatttaatttgactttgttgggaaaatggtgttggaggatactagttgataggagtggctttt 34975146  T
Q  151 ggtatagagttttagttgccaagtatggcgaattaggtggcaggttggaggttgggggccggagt 215  Q
    |||||   |||||||| | |   |||| |||| ||||||| |||||| |||||||||||||||||    
T  34975145 ggtatcatgttttagtcgtccgttatgacgaagtaggtgggaggttgaaggttgggggccggagt 34975081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 54 - 157
Target Start/End: Complemental strand, 2072247 - 2072144
Alignment:
Q  54 gagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaatggtgttggcggatgctggtggatagaggtggtttgtggt 153  Q
    |||||||||| ||||||| |||||||||||| ||  ||||||| |||||| ||||| |||||||| |||| |||| ||||||||||||| ||  ||||||    
T  2072247 gagtatggagatttggggttgagacagttgaggggatttaatattgctttattaggtaaatggtgatggcagatgttggtggatagaggagggatgtggt 2072148  T
Q  154 atag 157  Q
    ||||    
T  2072147 atag 2072144  T

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Target: chr4; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 326 - 488
Target Start/End: Original strand, 8486698 - 8486860
Alignment:
Q  326 tgataggtggttaggggatgttcctttttgtgtccgttttagtagactgttagagttaacagagaataagttcatgtctgtggcaaacttgttctctgtt 425  Q
    |||||||||| ||||||| | |||| ||||||| || |||||  |  |||| |||||||||||||||||||  ||||| || |   ||||| ||||||||    
T  8486698 tgataggtggataggggaggctcctctttgtgtgcggtttaggcggttgtttgagttaacagagaataagtctatgtccgtcgtcgacttgctctctgtt 8486797  T
Q  426 gattcggagcagcggggggttatgtggaggtggagacgtcgtttgtggcagtgggaggaggag 488  Q
    |||||||| | | ||||||   ||||||||||||||||| | || |||||||||||| |||||    
T  8486798 gattcggaccggtggggggaggtgtggaggtggagacgtaggttatggcagtgggagaaggag 8486860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 53 - 238
Target Start/End: Complemental strand, 20396290 - 20396105
Alignment:
Q  53 ggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaatggtgttggcggatgctggtggatagaggtggtttgtgg 152  Q
    ||||| |||||||||||||||| | | |||||| || ||||||   ||||| ||||| || ||||||||| ||||||| || |||||  |||| || |||    
T  20396290 ggagtttggaggtttgggggtgcgtcggttgaaagaatttaatttggctttattaggaaagtggtgttggaggatgctagttgataggagtggattttgg 20396191  T
Q  153 tatagagttttagttgccaagtatggcgaattaggtggcaggttggaggttgggggccggagtgtttcgtgttggtggagggaggt 238  Q
    ||| |||| | ||| |||   ||||||||| | ||||| ||||||||| ||||||||||||||  ||| | ||||||| |||||||    
T  20396190 tatcgagtctcagtcgcccgttatggcgaagtgggtgggaggttggagtttgggggccggagttgttcttcttggtggcgggaggt 20396105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 48 - 216
Target Start/End: Complemental strand, 53810554 - 53810386
Alignment:
Q  48 aaaaaggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaatggtgttggcggatgctggtggatagaggtggtt 147  Q
    ||||| ||| |||||||||||| ||| ||  | |||||||||||||||| || |||  || | |||||||||||| ||||| | || |||||||  ||||    
T  53810554 aaaaaagagcatggaggtttggtggttaggaaattgaaggagtttaatattgttttactatgtaaatggtgttggaggatgttagtcgatagagaaggtt 53810455  T
Q  148 tgtggtatagagttttagttgccaagtatggcgaattaggtggcaggttggaggttgggggccggagtg 216  Q
    |||||||    |||||||| | |   ||||||||| ||||||| ||||||||||| |||||||||||||    
T  53810454 tgtggtaccatgttttagtcgtctgttatggcgaagtaggtgggaggttggaggtggggggccggagtg 53810386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 52 - 236
Target Start/End: Original strand, 56336932 - 56337115
Alignment:
Q  52 aggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaatggtgttggcggatgctggtggatagaggtggtttgtg 151  Q
    ||||| |||| ||||||||| |||| ||||||| ||| ||||||  |||||| ||||| || |||||||| ||| || ||||||||||||  ||||||||    
T  56336932 aggagaatgggggtttgggg-tgaggcagttgagggaatttaatcttgctttgttaggaaagtggtgttgtcggttgttggtggatagagtaggtttgtg 56337030  T
Q  152 gtatagagttttagttgccaagtatggcgaattaggtggcaggttggaggttgggggccggagtgtttcgtgttggtggagggag 236  Q
    |||||| ||  |||  || | |||||| ||    | |||  |||||||||||||||| |||||||||||   |||||||||||||    
T  56337031 gtatagggtactagcggcgaggtatggtgaggaggctgggcggttggaggttgggggtcggagtgtttctacttggtggagggag 56337115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 51 - 157
Target Start/End: Original strand, 42952935 - 42953041
Alignment:
Q  51 aaggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaatggtgttggcggatgctggtggatagaggtggtttgt 150  Q
    ||||||| |||||| |||||||| ||    |||| ||||||||||  |||||| ||||| |||||||||||| ||||| |||| |||||||  |||||||    
T  42952935 aaggagtctggagggttgggggttaggagattgagggagtttaattttgctttgttaggtaaatggtgttggaggatgttggtagatagagtaggtttgt 42953034  T
Q  151 ggtatag 157  Q
    |||||||    
T  42953035 ggtatag 42953041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 48 - 236
Target Start/End: Complemental strand, 9691135 - 9690947
Alignment:
Q  48 aaaaaggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaatggtgttggcggatgctggtggatagaggtggtt 147  Q
    ||||||||||  |||||| |||||||||| || |||| ||| ||||||    | || || || |||||||||||| || || ||||||||||| |||| |    
T  9691135 aaaaaggagttaggaggtctgggggtgaggcacttgagggaatttaatttaaccttgttgggtaaatggtgttggaggttgttggtggatagatgtgggt 9691036  T
Q  148 tgtggtatagagttttagttgccaagtatggcgaattaggtggcaggttggaggttgggggccggagtgtttcgtgttggtggagggag 236  Q
    | |||||||| ||  |||| || |  ||||| ||    | ||| |||||||||||||||||||||||||||||   |||||||||||||    
T  9691035 tttggtatagggtgctagtagctagatatggtgaggaggctgggaggttggaggttgggggccggagtgtttctcattggtggagggag 9690947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 132 - 238
Target Start/End: Original strand, 29553251 - 29553357
Alignment:
Q  132 gtggatagaggtggtttgtggtatagagttttagttgccaagtatggcgaattaggtggcaggttggaggttgggggccggagtgtttcgtgttggtgga 231  Q
    ||||||||||||||||| |||||||||||||||||  ||   ||||| ||  |  |||| |||||||||| |||||||||||||| ||| |  ||||||     
T  29553251 gtggatagaggtggtttttggtatagagttttagtcacccgttatggtgaggtttgtgggaggttggaggatgggggccggagtggttctttgtggtggc 29553350  T
Q  232 gggaggt 238  Q
    |||||||    
T  29553351 gggaggt 29553357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 36 - 96
Target Start/End: Original strand, 17468524 - 17468584
Alignment:
Q  36 actgtttgttccaaaaaggagtatggaggtttgggggtgagacagttgaaggagtttaata 96  Q
    ||||||||||  |||| |||| |||||||||||||||||| || ||||||||| |||||||    
T  17468524 actgtttgtttgaaaagggagaatggaggtttgggggtgaaacggttgaaggaatttaata 17468584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 50 - 238
Target Start/End: Complemental strand, 40688777 - 40688589
Alignment:
Q  50 aaaggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaatggtgttggcggatgctggtggatagaggtggtttg 149  Q
    |||||||||||| ||||| || || || ||||||| |||||||||| | || || |||||||| ||||||||| || | || || ||| |||| || |||    
T  40688777 aaaggagtatggtggtttaggagttaggcagttgagggagtttaatgaggcgttgttagggaagtggtgttggaggttacttgttgatcgaggagggttg 40688678  T
Q  150 tggtatagagttttagttgccaagtatggcgaattagg--tggcaggttggaggttgggggccggagtgtttcgtgttggtggagggaggt 238  Q
    |||||| | || || ||||  |  ||||| |  |||||  ||| |||||||||| |||||||||||||| ||| | |||||||| ||||||    
T  40688677 tggtatcgggtgttggttggtagatatggtg--ttagggatgggaggttggaggatgggggccggagtggttctttttggtggaaggaggt 40688589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 193 - 236
Target Start/End: Complemental strand, 36183105 - 36183062
Alignment:
Q  193 ggttggaggttgggggccggagtgtttcgtgttggtggagggag 236  Q
    ||||||||||||||||||||||||||||   |||||||||||||    
T  36183105 ggttggaggttgggggccggagtgtttctacttggtggagggag 36183062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 173 - 215
Target Start/End: Original strand, 4524178 - 4524220
Alignment:
Q  173 gtatggcgaattaggtggcaggttggaggttgggggccggagt 215  Q
    |||||||||| |||| || ||||||||||||||||||||||||    
T  4524178 gtatggcgaagtaggcgggaggttggaggttgggggccggagt 4524220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 50 - 95
Target Start/End: Complemental strand, 7099193 - 7099148
Alignment:
Q  50 aaaggagtatggaggtttgggggtgagacagttgaaggagtttaat 95  Q
    ||||||||||||||||||||| || || ||||||| ||||||||||    
T  7099193 aaaggagtatggaggtttgggtgttaggcagttgagggagtttaat 7099148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 192 - 236
Target Start/End: Complemental strand, 2072109 - 2072065
Alignment:
Q  192 aggttggaggttgggggccggagtgtttcgtgttggtggagggag 236  Q
    ||||| ||||||||||| ||||||||||| || ||||||||||||    
T  2072109 aggttagaggttgggggacggagtgtttcttgctggtggagggag 2072065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 36 - 96
Target Start/End: Complemental strand, 36952027 - 36951967
Alignment:
Q  36 actgtttgttccaaaaaggagtatggaggtttgggggtgagacagttgaaggagtttaata 96  Q
    ||||||||||  |||| |||| |||||||||||||||||| |  ||||||||| |||||||    
T  36952027 actgtttgtttgaaaagggagaatggaggtttgggggtgaaatggttgaaggaatttaata 36951967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 53 - 125
Target Start/End: Complemental strand, 38296414 - 38296342
Alignment:
Q  53 ggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaatggtgttggcgg 125  Q
    ||||||||| |||||||| ||| |   ||||| |||||||||| | || || |||||||||||||||||||||    
T  38296414 ggagtatggtggtttgggagtgcggaggttgagggagtttaatgaggcgttattagggaaatggtgttggcgg 38296342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 187 - 239
Target Start/End: Original strand, 49925833 - 49925885
Alignment:
Q  187 gtggcaggttggaggttgggggccggagtgtttcgtgttggtggagggaggtg 239  Q
    |||| ||||||||||||||||||||||||  ||| | ||||||| ||||||||    
T  49925833 gtgggaggttggaggttgggggccggagttgttcttcttggtggcgggaggtg 49925885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 192 - 236
Target Start/End: Original strand, 52617436 - 52617480
Alignment:
Q  192 aggttggaggttgggggccggagtgtttcgtgttggtggagggag 236  Q
    |||||||||||| | |||||||||||||| | |||||||||||||    
T  52617436 aggttggaggttagaggccggagtgtttcatcttggtggagggag 52617480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 329; Significance: 0; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 329; E-Value: 0
Query Start/End: Original strand, 6 - 487
Target Start/End: Original strand, 327520 - 328013
Alignment:
Q  6 cataggataattagttggataggatggaaaactgtttgttccaaaaaggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttct 105  Q
    ||||||| |||||| |||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||| |    
T  327520 cataggaaaattagctggataggatggaaaactatttgttccagaaaggagtatggaggtttgggggtgagacagttgaaggagtttaatagtgctttgt 327619  T
Q  106 tagggaaatggtgttggcggatgctggtggatagaggtggtttgtggtatagagttttagttgccaagtatggcgaattaggtggcaggttggaggttgg 205  Q
    ||||||||||||||||||||||| |||||||||||| ||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||    
T  327620 tagggaaatggtgttggcggatgttggtggatagagatggtttgtggtatagggttttagttgccaggtatggcgaattaggtggcaggttggaggttgg 327719  T
Q  206 gggccggagtgtttcgtgttggtggagggaggtgagtcgtcttaggggtagtgatggtgatggagagggcggctggtttgttgatcgtgtggctagcagg 305  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| | || ||||||| ||||| ||||||||| |||    
T  327720 gggccggagtgtttcatgttggtggagggaggtgagtcgtcttaggggtagtgatggtgctggagagaggggttggtttggtgatcttgtggctaggagg 327819  T
Q  306 gttggagat------------ttgttttggtttgataggtggttaggggatgttcctttttgtgtccgttttagtagactgttagagttaacagagaata 393  Q
    |||||||||            ||||||||||| ||||||||||||||||||||||||||||||||||||||  |||| ||||| ||||||||||||||||    
T  327820 gttggagatggagctaatacgttgttttggttggataggtggttaggggatgttcctttttgtgtccgtttccgtaggctgtttgagttaacagagaata 327919  T
Q  394 agttcatgtctgtggcaaacttgttctctgttgattcggagcagcggggggttatgtggaggtggagacgtcgtttgtggcagtgggaggagga 487  Q
    |||| |||||||||||| ||||||| ||| |||||||||||||| |||||||| ||||||||||||||||| | ||||||||||||||||||||    
T  327920 agtttatgtctgtggcagacttgttatctattgattcggagcagtggggggttttgtggaggtggagacgtaggttgtggcagtgggaggagga 328013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 325; E-Value: 0
Query Start/End: Original strand, 6 - 487
Target Start/End: Original strand, 312066 - 312559
Alignment:
Q  6 cataggataattagttggataggatggaaaactgtttgttccaaaaaggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttct 105  Q
    ||||||| |||||| |||||||||||||||||| ||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||| |||||| |    
T  312066 cataggaaaattagctggataggatggaaaactatttgttccagaaaggagtacggaggtttgggggtgagacagttgaaggagtttaatagtgctttgt 312165  T
Q  106 tagggaaatggtgttggcggatgctggtggatagaggtggtttgtggtatagagttttagttgccaagtatggcgaattaggtggcaggttggaggttgg 205  Q
    ||||||||||||||||||||||| |||||||||||| ||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||    
T  312166 tagggaaatggtgttggcggatgttggtggatagagatggtttgtggtatagggttttagttgccaggtatggcgaattaggtggcaggttggaggttgg 312265  T
Q  206 gggccggagtgtttcgtgttggtggagggaggtgagtcgtcttaggggtagtgatggtgatggagagggcggctggtttgttgatcgtgtggctagcagg 305  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| | || ||||||| ||||| ||||||||| |||    
T  312266 gggccggagtgtttcatgttggtggagggaggtgagtcgtcttaggggtagtgatggtgctggagagaggggttggtttggtgatcttgtggctaggagg 312365  T
Q  306 gttggagat------------ttgttttggtttgataggtggttaggggatgttcctttttgtgtccgttttagtagactgttagagttaacagagaata 393  Q
    |||||||||            ||||||||||| ||||||||||||||||||||||||||||||||||||||  |||| ||||| ||||||||||||||||    
T  312366 gttggagatggagctaatacgttgttttggttggataggtggttaggggatgttcctttttgtgtccgtttccgtaggctgtttgagttaacagagaata 312465  T
Q  394 agttcatgtctgtggcaaacttgttctctgttgattcggagcagcggggggttatgtggaggtggagacgtcgtttgtggcagtgggaggagga 487  Q
    |||| |||||||||||| ||||||| ||| |||||||||||||| |||||||| ||||||||||||||||| | ||||||||||||||||||||    
T  312466 agtttatgtctgtggcagacttgttatctattgattcggagcagtggggggttttgtggaggtggagacgtaggttgtggcagtgggaggagga 312559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 325; Significance: 0; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 325; E-Value: 0
Query Start/End: Original strand, 6 - 487
Target Start/End: Original strand, 134239 - 134732
Alignment:
Q  6 cataggataattagttggataggatggaaaactgtttgttccaaaaaggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttct 105  Q
    ||||||| |||||| |||||||||||||||||| ||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||| |||||| |    
T  134239 cataggaaaattagctggataggatggaaaactatttgttccagaaaggagtacggaggtttgggggtgagacagttgaaggagtttaatagtgctttgt 134338  T
Q  106 tagggaaatggtgttggcggatgctggtggatagaggtggtttgtggtatagagttttagttgccaagtatggcgaattaggtggcaggttggaggttgg 205  Q
    ||||||||||||||||||||||| |||||||||||| ||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||    
T  134339 tagggaaatggtgttggcggatgttggtggatagagatggtttgtggtatagggttttagttgccaggtatggcgaattaggtggcaggttggaggttgg 134438  T
Q  206 gggccggagtgtttcgtgttggtggagggaggtgagtcgtcttaggggtagtgatggtgatggagagggcggctggtttgttgatcgtgtggctagcagg 305  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| | || ||||||| ||||| ||||||||| |||    
T  134439 gggccggagtgtttcatgttggtggagggaggtgagtcgtcttaggggtagtgatggtgctggagagaggggttggtttggtgatcttgtggctaggagg 134538  T
Q  306 gttggagat------------ttgttttggtttgataggtggttaggggatgttcctttttgtgtccgttttagtagactgttagagttaacagagaata 393  Q
    |||||||||            ||||||||||| ||||||||||||||||||||||||||||||||||||||  |||| ||||| ||||||||||||||||    
T  134539 gttggagatggagctaatacgttgttttggttggataggtggttaggggatgttcctttttgtgtccgtttccgtaggctgtttgagttaacagagaata 134638  T
Q  394 agttcatgtctgtggcaaacttgttctctgttgattcggagcagcggggggttatgtggaggtggagacgtcgtttgtggcagtgggaggagga 487  Q
    |||| |||||||||||| ||||||| ||| |||||||||||||| |||||||| ||||||||||||||||| | ||||||||||||||||||||    
T  134639 agtttatgtctgtggcagacttgttatctattgattcggagcagtggggggttttgtggaggtggagacgtaggttgtggcagtgggaggagga 134732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 268; Significance: 1e-149; HSPs: 32)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 268; E-Value: 1e-149
Query Start/End: Original strand, 20 - 495
Target Start/End: Original strand, 15653107 - 15653591
Alignment:
Q  20 ttggataggatggaaaactgtttgttccaaaaaggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaatggtgt 119  Q
    ||||||||| ||||||||||||||||||| ||||||| |||||||||||||| |||||||||||||||| ||||||| |||||| ||||| |||||||||    
T  15653107 ttggataggctggaaaactgtttgttccagaaaggagaatggaggtttgggg-tgagacagttgaaggaatttaatagtgctttgttaggtaaatggtgt 15653205  T
Q  120 tggcggatgctggtggatagaggtggtttgtggtatagagttttagttgccaagtatggcgaattaggtggcaggttggaggttgggggccggagtgttt 219  Q
    ||||||||| ||||||| ||||||||||||  |||||| || |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |    
T  15653206 tggcggatgttggtggacagaggtggtttg--gtatagggtcttagttgccaggtatggcgaattaggtggcaggttggaggttgggggccggagtgtgt 15653303  T
Q  220 cgtgttggtggagggaggtgagtcgtcttaggggtagtgatggtgatggagagggcggctggtttgttgatcgtgtggctagcagggttggagat----- 314  Q
    ||||||||||||||||||||||||||||||||| ||||| |||||| || ||  | || ||||||||||  |  |||||||| ||||||||||||         
T  15653304 cgtgttggtggagggaggtgagtcgtcttagggatagtgttggtgagggtgattgtgggtggtttgttggccacgtggctaggagggttggagatggatc 15653403  T
Q  315 -------ttgttttggtttgataggtggttaggggatgttcctttttgtgtccgttttagtagactgttagagttaacagagaataagttcatgtctgtg 407  Q
           ||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| |||||||| ||||||||| |||||||| ||    
T  15653404 tgatacgttgttttggtttgataggtggttaggggatgttcctttttgtgcccgttttcgtagactgtttgagttaacggagaataagctcatgtctatg 15653503  T
Q  408 gcaaacttgttctctgttgattcggagcagcggggggttatgtggaggtggagacgtcgtttgtggcagtgggaggaggagatgttag 495  Q
    ||| |||||||||||||||||| |||||||| ||||||| | ||||||||||| ||| | ||||||||||||||||||||||||||||    
T  15653504 gcagacttgttctctgttgatttggagcagcagggggttttctggaggtggaggcgtagattgtggcagtgggaggaggagatgttag 15653591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 24 - 217
Target Start/End: Complemental strand, 46626559 - 46626366
Alignment:
Q  24 ataggatggaaaactgtttgttccaaaaaggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaatggtgttggc 123  Q
    ||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||| |||||||| ||||||| |||||| ||||| |||||||||||||    
T  46626559 ataggctggaaaactgtttgttccacaaaggagaatggaggtttgggggtgagacaattgaaggaatttaatagtgctttgttaggtaaatggtgttggc 46626460  T
Q  124 ggatgctggtggatagaggtggtttgtggtatagagttttagttgccaagtatggcgaattaggtggcaggttggaggttgggggccggagtgt 217  Q
    ||||| || |||| |||||||||||||||||||| || |||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  46626459 ggatgttgttggacagaggtggtttgtggtatagtgtcttagttgccaggtatggcgaattaggtggcaggttggaggttgggggccggagtgt 46626366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 34 - 252
Target Start/End: Complemental strand, 13440780 - 13440562
Alignment:
Q  34 aaactgtttgttccaaaaaggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaatggtgttggcggatgctggt 133  Q
    ||||||||||||  |||||||||| ||| ||||||| |||| |  | |||||||||||||||   ||||| ||||| |||||||||||||||||| ||||    
T  13440780 aaactgtttgtttaaaaaaggagtgtggcggtttggtggtgcggaaattgaaggagtttaatttagctttgttaggaaaatggtgttggcggatgttggt 13440681  T
Q  134 ggatagaggtggtttgtggtatagagttttagttgccaagtatggcgaattaggtggcaggttggaggttgggggccggagtgtttcgtgttggtggagg 233  Q
    |||||||||||||||||||||| | |||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| || ||||||  |    
T  13440680 ggatagaggtggtttgtggtatcgggttttagtcgccaggtatggcgaattaggtggcaggttggaggttgggggccggagtgtttcttgctggtggtcg 13440581  T
Q  234 gaggtgagtcgtcttaggg 252  Q
    |||||||| ||||||||||    
T  13440580 gaggtgaggcgtcttaggg 13440562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 212 - 476
Target Start/End: Complemental strand, 46624242 - 46623966
Alignment:
Q  212 gagtgtttcgtgttggtggagggaggtgagtcgtcttaggggtagtgatggtgatggagagggcggctggtttgttgatcgtgtggctagcagggttgga 311  Q
    |||||| ||||||||||||||||||||||||||| |||||| ||||| ||| || || ||  | || |||||||||| ||  |||||||| |||||| ||    
T  46624242 gagtgtgtcgtgttggtggagggaggtgagtcgtattagggatagtgttggcgagggtgactgtgggtggtttgttggtcacgtggctaggagggttaga 46624143  T
Q  312 gat------------ttgttttggtttgataggtggttaggggatgttcctttttgtgtccgttttagtagactgttagagttaacagagaataagttca 399  Q
    |||            |||||||||||||||||||||||||||||||||||||| |||||||||||| | |||||||| |||||||| ||||||||| |||    
T  46624142 gatggttctgatacgttgttttggtttgataggtggttaggggatgttcctttctgtgtccgttttcgcagactgtttgagttaacggagaataagctca 46624043  T
Q  400 tgtctgtggcaaacttgttctctgttgattcggagcagcggggggttatgtggaggtggagacgtcgtttgtggcag 476  Q
    ||||||||||| |||||||||||||||||| |||||||| |||  || | ||||||||||| ||| |||||||||||    
T  46624042 tgtctgtggcagacttgttctctgttgatttggagcagcagggatttttttggaggtggaggcgtagtttgtggcag 46623966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 20 - 239
Target Start/End: Complemental strand, 45993316 - 45993098
Alignment:
Q  20 ttggataggatggaaaactgtttgttccaaaaaggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaatggtgt 119  Q
    ||||||||| |||||  ||||||||  | | ||||||| |||||| || ||||| |||||||||||||||||||||  ||| ||  ||||||||||||||    
T  45993316 ttggataggttggaactctgtttgtctccagaaggagtttggagggttaggggttagacagttgaaggagtttaatgttgcattactagggaaatggtgt 45993217  T
Q  120 tggcggatgctggtggatagaggtggtttgtggtatagagttttagttgccaagtatggcgaattaggtggcaggttggaggttgggggccggagtgttt 219  Q
    ||| ||||| | |||||||| |||||||| ||||||||||||||||| |||   ||||||||  |  |||| |||||||||||| |||||||||||  ||    
T  45993216 tggaggatgttagtggataggggtggtttttggtatagagttttagtcgcccgttatggcgaggtgtgtgggaggttggaggtt-ggggccggagttgtt 45993118  T
Q  220 cgtgttggtggagggaggtg 239  Q
    | | ||||||| ||||||||    
T  45993117 cttcttggtggcgggaggtg 45993098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 317 - 488
Target Start/End: Complemental strand, 13440485 - 13440314
Alignment:
Q  317 gttttggtttgataggtggttaggggatgttcctttttgtgtccgttttagtagactgttagagttaacagagaataagttcatgtctgtggcaaacttg 416  Q
    |||||||| |||||||||| ||||||| | |||| ||||||| || |||||  |  |||| |||||||||||||||||||  ||||| || ||  |||||    
T  13440485 gttttggtctgataggtggataggggaggctcctctttgtgtgcggtttaggcggttgtttgagttaacagagaataagtctatgtccgttgccgacttg 13440386  T
Q  417 ttctctgttgattcggagcagcggggggttatgtggaggtggagacgtcgtttgtggcagtgggaggaggag 488  Q
     |||||||||||||||||| | ||||||   ||||||||||||||||| |||| ||| ||||||||||||||    
T  13440385 ctctctgttgattcggagcggtggggggaggtgtggaggtggagacgtagtttatggtagtgggaggaggag 13440314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 317 - 495
Target Start/End: Original strand, 12378436 - 12378614
Alignment:
Q  317 gttttggtttgataggtggttaggggatgttcctttttgtgtccgttttagtagactgttagagttaacagagaataagttcatgtctgtggcaaacttg 416  Q
    |||||||| |||||||||| |||||||||||||| | ||||  || | |  ||||||||| |||||||  ||||||||| |||||||||||||||| |||    
T  12378436 gttttggtatgataggtggataggggatgttcctctctgtgagcggtatcatagactgtttgagttaatggagaataagatcatgtctgtggcaaatttg 12378535  T
Q  417 ttctctgttgattcggagcagcggggggttatgtggaggtggagacgtcgtttgtggcagtgggaggaggagatgttag 495  Q
    |||| |||| | ||| ||| | |||||| | ||| |||| |||| ||  | ||||||||||||||||||||||||||||    
T  12378536 ttctttgttaagtcgaagcggtggggggatttgttgaggcggaggcgcaggttgtggcagtgggaggaggagatgttag 12378614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 42 - 238
Target Start/End: Complemental strand, 18768127 - 18767931
Alignment:
Q  42 tgttccaaaaaggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaatggtgttggcggatgctggtggatagag 141  Q
    ||||| |||||||||| ||||||||||||||| ||    |||||||||||||||| ||||||  |||| |||||||||||| ||||| | || |||||||    
T  18768127 tgttctaaaaaggagtttggaggtttgggggttaggagattgaaggagtttaatattgctttactaggtaaatggtgttggaggatgttagttgatagag 18768028  T
Q  142 gtggtttgtggtatagagttttagttgccaagtatggcgaattaggtggcaggttggaggttgggggccggagtgtttcgtgttggtggagggaggt 238  Q
      || |||||||||   ||||||||  ||   |||||| || ||||||| ||||||||||| ||||||||||||||||| |  |||||| |||||||    
T  18768027 aagggttgtggtatcaggttttagtctcccgttatggcaaagtaggtgggaggttggaggtggggggccggagtgtttctttgtggtggcgggaggt 18767931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 21 - 238
Target Start/End: Complemental strand, 18671910 - 18671693
Alignment:
Q  21 tggataggatggaaaactgtttgttccaaaaaggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaatggtgtt 120  Q
    |||||||| ||||| ||  | ||||| ||||| ||| |||||||||||| ||| ||  |||||||||| ||||||  ||||||  |||| ||||||||||    
T  18671910 tggataggttggaataccttgtgttctaaaaatgagcatggaggtttggtggttaggaagttgaaggaatttaatgttgctttactaggtaaatggtgtt 18671811  T
Q  121 ggcggatgctggtggatagaggtggtttgtggtatagagttttagttgccaagtatggcgaattaggtggcaggttggaggttgggggccggagtgtttc 220  Q
    || ||||| | || |||||||  || |||||||||   |||||||| ||    ||||||||| ||||||| ||||||||||| |||||||||||||||||    
T  18671810 ggaggatgttagttgatagagcagggttgtggtatcatgttttagtcgctcgttatggcgaagtaggtgggaggttggaggtggggggccggagtgtttc 18671711  T
Q  221 gtgttggtggagggaggt 238  Q
     |  |||||| |||||||    
T  18671710 ttcatggtggcgggaggt 18671693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 51 - 198
Target Start/End: Complemental strand, 4077978 - 4077831
Alignment:
Q  51 aaggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaatggtgttggcggatgctggtggatagaggtggtttgt 150  Q
    ||||||| |||||||||||||||||||||||||||||| ||||||   ||||||||||| || || |||||| ||||||| || |||||  |||| || |    
T  4077978 aaggagtttggaggtttgggggtgagacagttgaaggaatttaatttggctttcttaggaaagtgatgttggaggatgctagttgataggagtggctttt 4077879  T
Q  151 ggtatagagttttagttgccaagtatggcgaattaggtggcaggttgg 198  Q
     |||| |||||||||| |||   ||||||||| ||||||| |||||||    
T  4077878 agtatcgagttttagtcgcccgttatggcgaagtaggtgggaggttgg 4077831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 14 - 208
Target Start/End: Complemental strand, 5327510 - 5327316
Alignment:
Q  14 aattagttggataggatggaaaactgtttgttccaaaaaggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaa 113  Q
    ||||| ||||||||| ||||| ||||| ||||| ||||||||| | || || ||||| || ||  |||||||||||||||||  ||||||  ||||||||    
T  5327510 aattacttggataggttggaatactgtgtgttctaaaaaggagaaaggggggttgggagttaggaagttgaaggagtttaatcttgctttactagggaaa 5327411  T
Q  114 tggtgttggcggatgctggtggatagaggtggtttgtggtatagagttttagttgccaagtatggcgaattaggtggcaggttggaggttggggg 208  Q
    ||||||||| ||||| | ||||||||||  ||||| |||||    |||||||| |||   ||||||||  ||||||| |||||||||| ||||||    
T  5327410 tggtgttggaggatgttagtggatagagaaggtttatggtaccatgttttagtcgcccgatatggcgaggtaggtgggaggttggaggctggggg 5327316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 51 - 157
Target Start/End: Original strand, 19544832 - 19544938
Alignment:
Q  51 aaggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaatggtgttggcggatgctggtggatagaggtggtttgt 150  Q
    |||||||||||||| || ||||| || ||||||| ||||||||||| ||| || ||||| |||||||||||||||||| |||||||||||| ||| || |    
T  19544832 aaggagtatggagggttaggggtcaggcagttgagggagtttaatagtgccttattaggcaaatggtgttggcggatgttggtggatagagatgggtttt 19544931  T
Q  151 ggtatag 157  Q
    |||||||    
T  19544932 ggtatag 19544938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 14 - 239
Target Start/End: Original strand, 13553577 - 13553802
Alignment:
Q  14 aattagttggataggatggaaaactgtttgttccaaaaaggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaa 113  Q
    ||||| ||||||||| ||||| ||| | |||||   |||||||| ||| || |||||||| ||   ||||| ||||||||||  |||||| ||||  |||    
T  13553577 aattacttggataggttggaatactttgtgttctccaaaggagtctggggggttgggggttaggaggttgagggagtttaattttgctttgttagataaa 13553676  T
Q  114 tggtgttggcggatgctggtggatagaggtggtttgtggtatagagttttagttgccaagtatggcgaattaggtggcaggttggaggttgggggccgga 213  Q
    ||||||||| ||||| |||| |||||||  || ||||||||||| ||| |||| |||   ||||||||  | || || ||||||||||||||||||||||    
T  13553677 tggtgttggaggatgttggtagatagagtagggttgtggtatagtgttctagtcgcccgttatggcgaggttggagggaggttggaggttgggggccgga 13553776  T
Q  214 gtgtttcgtgttggtggagggaggtg 239  Q
    ||  |||   ||||||||||||||||    
T  13553777 gttgttctcattggtggagggaggtg 13553802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 14 - 203
Target Start/End: Complemental strand, 41340279 - 41340091
Alignment:
Q  14 aattagttggataggatggaaaactgtttgttccaaaaaggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaa 113  Q
    ||||| ||||||||| ||||| ||||| ||||| ||| ||||| | ||||| |||||| | ||  |||||||||||||||||  ||||||  ||||||||    
T  41340279 aattacttggataggttggaatactgtatgttctaaagaggagaaaggagggttgggg-tcaggaagttgaaggagtttaattttgctttactagggaaa 41340181  T
Q  114 tggtgttggcggatgctggtggatagaggtggtttgtggtatagagttttagttgccaagtatggcgaattaggtggcaggttggaggtt 203  Q
    ||||||||| ||||| | ||||||||||  |||||||||||    |||||||| |||   ||||||||  ||||||| ||||||||||||    
T  41340180 tggtgttggaggatgttagtggatagagaaggtttgtggtaccatgttttagtcgcccgatatggcgaggtaggtgggaggttggaggtt 41340091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 42 - 238
Target Start/End: Original strand, 34457579 - 34457775
Alignment:
Q  42 tgttccaaaaaggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaatggtgttggcggatgctggtggatagag 141  Q
    ||||| |||| |||| |||||||||||||||| ||    |||||||||||||||| ||||||  |||| ||||||||||||  |||| | || |||||||    
T  34457579 tgttctaaaacggagcatggaggtttgggggttaggagattgaaggagtttaatattgctttactaggtaaatggtgttgggtgatgttagttgatagag 34457678  T
Q  142 gtggtttgtggtatagagttttagttgccaagtatggcgaattaggtggcaggttggaggttgggggccggagtgtttcgtgttggtggagggaggt 238  Q
      || |||||||||   ||||||||  ||   |||||| || ||||||| ||||||||||| ||||||||||||||||| |  |||||| |||||||    
T  34457679 aagggttgtggtatcaggttttagtcacccgttatggcaaagtaggtgggaggttggaggtggggggccggagtgtttctttgtggtggcgggaggt 34457775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 54 - 236
Target Start/End: Complemental strand, 23887790 - 23887609
Alignment:
Q  54 gagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaatggtgttggcggatgctggtggatagaggtggtttgtggt 153  Q
    |||| |||||| |||||||| |||||||||| |||||||||||  ||||| ||||| |||||||||||| |||||||||| || |||||||  || ||||    
T  23887790 gagtttggagggttgggggtcagacagttgagggagtttaatatagctttgttaggaaaatggtgttggaggatgctggtagacagaggtgagttctggt 23887691  T
Q  154 atagagttttagttgccaagtatggcgaattaggtggcaggttggaggttgggggccggagtgtttcgtgttggtggagggag 236  Q
    |||| ||||| |  |  | ||| || | |  |||  | ||||||||||||||||| ||||||||||| | |||||||||||||    
T  23887690 atagggttttggcggtgaggtacggtg-aggaggcaggaggttggaggttgggggtcggagtgtttcttcttggtggagggag 23887609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 54 - 236
Target Start/End: Complemental strand, 23898966 - 23898785
Alignment:
Q  54 gagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaatggtgttggcggatgctggtggatagaggtggtttgtggt 153  Q
    |||| |||||| |||||||| |||||||||| |||||||||||  ||||| ||||| |||||||||||| |||||||||| || |||||||  || ||||    
T  23898966 gagtttggagggttgggggtcagacagttgagggagtttaatatagctttgttaggaaaatggtgttggaggatgctggtagacagaggtgagttctggt 23898867  T
Q  154 atagagttttagttgccaagtatggcgaattaggtggcaggttggaggttgggggccggagtgtttcgtgttggtggagggag 236  Q
    |||| ||||| |  |  | ||| || | |  |||  | ||||||||||||||||| ||||||||||| | |||||||||||||    
T  23898866 atagggttttggcggtgaggtacggtg-aggaggcaggaggttggaggttgggggtcggagtgtttcttcttggtggagggag 23898785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 50 - 142
Target Start/End: Original strand, 39658816 - 39658908
Alignment:
Q  50 aaaggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaatggtgttggcggatgctggtggatagagg 142  Q
    |||||||| |||||| ||||||||||| ||||| | ||| ||||||  |||||| |||||||||||||||||| ||||| |||||||||||||    
T  39658816 aaaggagtttggaggattgggggtgaggcagttaagggaatttaattgtgctttattagggaaatggtgttggaggatgttggtggatagagg 39658908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 36 - 163
Target Start/End: Original strand, 33820974 - 33821101
Alignment:
Q  36 actgtttgttccaaaaaggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaatggtgttggcggatgctggtgg 135  Q
    |||||||||||   |||||||| |||||| |||||||| ||||| |||| |||||||||||  ||||| ||||  |||||||||||| |||||||||| |    
T  33820974 actgtttgttctcgaaaggagtttggagggttgggggtcagacacttgatggagtttaatatagctttattagaaaaatggtgttggaggatgctggtag 33821073  T
Q  136 atagaggtggtttgtggtatagagtttt 163  Q
    | |||| ||| || |||||||| |||||    
T  33821074 acagagatgggttctggtatagggtttt 33821101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 42 - 230
Target Start/End: Original strand, 36227571 - 36227759
Alignment:
Q  42 tgttccaaaaaggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaatggtgttggcggatgctggtggatagag 141  Q
    ||||| ||||||||| ||||||| |||||| | ||  | |||||||||||||||  ||||||  |||| || |||| |||| ||||| | || |||||||    
T  36227571 tgttctaaaaaggagcatggagggttggggtttaggaaattgaaggagtttaatgttgctttactaggtaagtggtattggaggatgttagttgatagag 36227670  T
Q  142 gtggtttgtggtatagagttttagttgccaagtatggcgaattaggtggcaggttggaggttgggggccggagtgtttcgtgttggtgg 230  Q
      ||||| ||||| |  ||| |||| ||   |||||||||| ||||||| ||||||||||| ||||||||||||| ||| | |||||||    
T  36227671 aaggtttatggtacaatgttctagtcgcgcggtatggcgaagtaggtgggaggttggaggtggggggccggagtgattcttcttggtgg 36227759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 53 - 238
Target Start/End: Complemental strand, 34232400 - 34232222
Alignment:
Q  53 ggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaatggtgttggcggatgctggtggatagaggtggtttgtgg 152  Q
    ||||| |||||||||||||||| | | |||||| || ||||||   ||||| |||||||| ||||||||| ||||||| || |||||  ||||||| |||    
T  34232400 ggagtttggaggtttgggggtgcgtcggttgaaagaatttaatttggctttattagggaagtggtgttggaggatgctagttgataggagtggtttttgg 34232301  T
Q  153 tatagagttttagttgccaagtatggcgaattaggtggcaggttggaggttgggggccggagtgtttcgtgttggtggagggaggt 238  Q
    ||| |||||||||| | |   ||||||| | ||||||       |||||||||||||||||||  ||| | |||||||||||||||    
T  34232300 tatcgagttttagtcgaccgttatggcggagtaggtg-------ggaggttgggggccggagttgttcttcttggtggagggaggt 34232222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 37 - 238
Target Start/End: Original strand, 27218538 - 27218739
Alignment:
Q  37 ctgtttgttccaaaaaggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaatggtgttggcggatgctggtgga 136  Q
    |||||||||  |||||||||| ||||||  |||||||||| ||||||  | | ||||||   ||||| ||||| ||||||||||||||| || || | ||    
T  27218538 ctgtttgtttaaaaaaggagtttggagggctgggggtgaggcagttgcggaaatttaatttagctttgttaggtaaatggtgttggcggttgttgataga 27218637  T
Q  137 tagaggtggtttgtggtatagagttttagttgccaagtatggcgaattaggtggcaggttggaggttgggggccggagtgtttcgtgttggtggagggag 236  Q
    ||||||||| || |||||||| || || || || |  ||||| ||    |  || ||||||| |||||||||||||||||| || | |||||||| ||||    
T  27218638 tagaggtggattttggtatagggtgttggtggcgagatatggtgaggaggcagggaggttggcggttgggggccggagtgtatcatcttggtggaaggag 27218737  T
Q  237 gt 238  Q
    ||    
T  27218738 gt 27218739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 192 - 252
Target Start/End: Original strand, 12378299 - 12378359
Alignment:
Q  192 aggttggaggttgggggccggagtgtttcgtgttggtggagggaggtgagtcgtcttaggg 252  Q
    |||||||||||||| |||| |||||| || ||||||||||||||||||||| || ||||||    
T  12378299 aggttggaggttggtggccagagtgtatcttgttggtggagggaggtgagttgtattaggg 12378359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 48 - 195
Target Start/End: Complemental strand, 17856441 - 17856295
Alignment:
Q  48 aaaaaggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaatggtgttggcggatgctggtggatagaggtggtt 147  Q
    |||||||||| |||||| |||||| | ||  |||||||||||||||||   || ||  ||||||||||||||||| ||||| | ||||||||||  || |    
T  17856441 aaaaaggagtttggagggttgggg-tcaggaagttgaaggagtttaatgtagcattgctagggaaatggtgttggaggatgttagtggatagagaaggat 17856343  T
Q  148 tgtggtatagagttttagttgccaagtatggcgaattaggtggcaggt 195  Q
    ||||||||   |||||||| |||   ||||||||| ||||||| ||||    
T  17856342 tgtggtatcatgttttagtcgcccgttatggcgaaataggtgggaggt 17856295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 36 - 74
Target Start/End: Original strand, 19293538 - 19293576
Alignment:
Q  36 actgtttgttccaaaaaggagtatggaggtttgggggtg 74  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  19293538 actgtttgttccaaaaaggagaatggaggtttgggggtg 19293576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 6 - 124
Target Start/End: Original strand, 39930981 - 39931099
Alignment:
Q  6 cataggataattagttggataggatggaaaactgtttgttccaaaaaggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttct 105  Q
    ||||||| ||||  |||||||||||||    |||||||||  | ||||||||||||||| |||||||| ||   ||||| |||| |||||| |||| | |    
T  39930981 cataggaaaatttcttggataggatggtcttctgtttgtttgagaaaggagtatggagggttgggggttaggaggttgagggagcttaatattgctctgt 39931080  T
Q  106 tagggaaatggtgttggcg 124  Q
    |||| ||||||||||||||    
T  39931081 taggtaaatggtgttggcg 39931099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 36 - 72
Target Start/End: Complemental strand, 41768859 - 41768823
Alignment:
Q  36 actgtttgttccaaaaaggagtatggaggtttggggg 72  Q
    ||||||||||||||||||||| |||||||||||||||    
T  41768859 actgtttgttccaaaaaggagaatggaggtttggggg 41768823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 197 - 236
Target Start/End: Original strand, 8752965 - 8753004
Alignment:
Q  197 ggaggttgggggccggagtgtttcgtgttggtggagggag 236  Q
    ||||||||||||||||||||| || |||||||||||||||    
T  8752965 ggaggttgggggccggagtgtctcttgttggtggagggag 8753004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 196 - 238
Target Start/End: Original strand, 12308690 - 12308732
Alignment:
Q  196 tggaggttgggggccggagtgtttcgtgttggtggagggaggt 238  Q
    ||||||||||||||||||||| ||| | |||||||||||||||    
T  12308690 tggaggttgggggccggagtggttcttattggtggagggaggt 12308732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 88 - 157
Target Start/End: Complemental strand, 19735191 - 19735122
Alignment:
Q  88 agtttaataatgctttcttagggaaatggtgttggcggatgctggtggatagaggtggtttgtggtatag 157  Q
    ||||||||  ||| || ||||| |||||||||||| ||||| |||| |||||||  ||||||||||||||    
T  19735191 agtttaattttgcattgttaggtaaatggtgttggaggatgttggtcgatagagtaggtttgtggtatag 19735122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 48 - 116
Target Start/End: Original strand, 20704900 - 20704968
Alignment:
Q  48 aaaaaggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaatgg 116  Q
    ||||| ||| |||||||||||||||||| |  |||||||||||| |||| | |||| || |||||||||    
T  20704900 aaaaaagagaatggaggtttgggggtgaaaaggttgaaggagttcaatatttctttgttggggaaatgg 20704968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 48 - 116
Target Start/End: Original strand, 20872944 - 20873012
Alignment:
Q  48 aaaaaggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaatgg 116  Q
    ||||| ||| |||||||||||||||||| |  |||||||||||| |||| | |||| || |||||||||    
T  20872944 aaaaaagagaatggaggtttgggggtgaaaaggttgaaggagttcaatatttctttgttggggaaatgg 20873012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 257; Significance: 1e-143; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 21 - 486
Target Start/End: Complemental strand, 7453092 - 7452615
Alignment:
Q  21 tggataggatggaaaactgtttgttccaaaaaggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaatggtgtt 120  Q
    |||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| || ||||||| |||||| ||||| || |||||||    
T  7453092 tggataggttggaaaactgtttgttcaaaaaaggagtatggaggtttgggggtgagacagttgaatgaatttaatagtgctttgttaggtaagtggtgtt 7452993  T
Q  121 ggcggatgctggtggatagaggtggtttgtggtatagagttttagttgccaagtatggcgaattaggtggcaggttggaggttgggggccggagtgtttc 220  Q
    |||||||| ||||||| ||||||||||||||||||||  | |||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  7452992 ggcggatgttggtggacagaggtggtttgtggtataggatcttagtttccaggtatggcgaattaggtggcaggttggaggttgggggccggagtgtttc 7452893  T
Q  221 gtgttggtggagggaggtgagtcgtcttaggggtagtgatggtgatggagagggcggctggtttgttgatcgtgtggctagcagggttggagat------ 314  Q
    |||||||||||||||||||||||||||||||| ||||| |||||| || ||  | || |||||| | |  |  |||||||| ||||||||||||          
T  7452892 gtgttggtggagggaggtgagtcgtcttagggatagtgttggtgagggtgattgtgggtggtttctcgcccacgtggctaggagggttggagatggttct 7452793  T
Q  315 ------ttgttttggtttgataggtggttaggggatgttcctttttgtgtccgttttagtagactgttagagttaacagagaataagttcatgtctgtgg 408  Q
          |||||||||| ||||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||| ||||||||| | ||||||||||    
T  7452792 gatacgttgttttggtatgataggtggttaggggatgttcctttctgtgtccgttttcgtagactgtttgagttaacggagaataagcttatgtctgtgg 7452693  T
Q  409 caaacttgttctctgttgattcggagcagcggggggttatgtggaggtggagacgtcgtttgtggcagtgggaggagg 486  Q
    || |||||||||||||||||| |||||||| ||||||| | ||||||||||| ||| | |||||||||||||||||||    
T  7452692 cagacttgttctctgttgatttggagcagcagggggttgtttggaggtggaggcgtagattgtggcagtgggaggagg 7452615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 51 - 239
Target Start/End: Complemental strand, 36157863 - 36157676
Alignment:
Q  51 aaggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaatggtgttggcggatgctggtggatagaggtggtttgt 150  Q
    ||||||| ||||||||||||||||||||||||||||||||||||| | ||||| ||||| || ||||||||| ||||||| || |||||  |||||||||    
T  36157863 aaggagtttggaggtttgggggtgagacagttgaaggagtttaatcaggctttgttaggaaagtggtgttggaggatgcttgttgataggagtggtttgt 36157764  T
Q  151 ggtatagagttttagttgccaagtatggcgaattaggtggcaggttggaggttgggggccggagtgtttcgtgttggtggagggaggtg 239  Q
    ||||| |||||||||| |||  |||||||||| ||||||| ||||||||||||||||||||||||  ||| | ||||||||||||||||    
T  36157763 ggtattgagttttagtcgcc-cgtatggcgaagtaggtgggaggttggaggttgggggccggagttgttcttcttggtggagggaggtg 36157676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 318 - 488
Target Start/End: Original strand, 16420719 - 16420889
Alignment:
Q  318 ttttggtttgataggtggttaggggatgttcctttttgtgtccgttttagtagactgttagagttaacagagaataagttcatgtctgtggcaaacttgt 417  Q
    ||||||| |||||||||| ||||||| | |||| ||||||| || |||||  |  |||| |||||||||||||||||||  |||||||||||  |||||     
T  16420719 ttttggtctgataggtggataggggaggctcctctttgtgtgcggtttaggcggttgtttgagttaacagagaataagtctatgtctgtggccgacttgc 16420818  T
Q  418 tctctgttgattcggagcagcggggggttatgtggaggtggagacgtcgtttgtggcagtgggaggaggag 488  Q
    |||||||||||||||||| | ||||||   ||||||||||||||||| | || ||||||||||||||||||    
T  16420819 tctctgttgattcggagcggtggggggaggtgtggaggtggagacgtaggttatggcagtgggaggaggag 16420889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 20 - 208
Target Start/End: Original strand, 4987464 - 4987651
Alignment:
Q  20 ttggataggatggaaaactgtttgttccaaaaaggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaatggtgt 119  Q
    ||||||||| |||||  ||||||||  | | ||||||| |||||| || ||||| |||||||||||||||||||||  ||| ||  ||||||||||||||    
T  4987464 ttggataggttggaactctgtttgtctccagaaggagtttggagggttaggggttagacagttgaaggagtttaatgttgccttactagggaaatggtgt 4987563  T
Q  120 tggcggatgctggtggatagaggtggtttgtggtatagagttttagttgccaagtatggcgaattaggtggcaggttggaggttggggg 208  Q
    ||| ||||| | |||||| | |||||||| ||||||||||||||||| |||   ||||||||  |  |||| |||||||||||||||||    
T  4987564 tggaggatgttagtggatgggggtggtttttggtatagagttttagtcgcccgttatggcgaggtgtgtgg-aggttggaggttggggg 4987651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 64 - 238
Target Start/End: Complemental strand, 17659528 - 17659354
Alignment:
Q  64 gtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaatggtgttggcggatgctggtggatagaggtggtttgtggtatagagtttt 163  Q
    |||||| |||||||| |||||| || ||||||   ||||| ||||| || ||||||||| ||||||| || |||||  |||| || |||||| |||| ||    
T  17659528 gtttggaggtgagacggttgaaagaatttaatgtggctttgttaggtaagtggtgttggaggatgctagttgataggagtggcttttggtatcgagtctt 17659429  T
Q  164 agttgccaagtatggcgaattaggtggcaggttggaggttgggggccggagtgtttcgtgttggtggagggaggt 238  Q
    ||| |||   ||||||||| ||||||| ||||||||||||||||||||||||  ||| | |||||||||||||||    
T  17659428 agtcgcccgttatggcgaagtaggtgggaggttggaggttgggggccggagttgttcttcttggtggagggaggt 17659354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 20 - 212
Target Start/End: Complemental strand, 23942828 - 23942636
Alignment:
Q  20 ttggataggatggaaaactgtttgttccaaaaaggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaatggtgt 119  Q
    ||||||||| ||||| ||  | ||||| ||||||||| |||||||||||||||| ||  |||||||||||||||||  ||||||  |||| |||||||||    
T  23942828 ttggataggttggaataccttgtgttctaaaaaggagcatggaggtttgggggtcaggaagttgaaggagtttaatgttgctttactaggtaaatggtgt 23942729  T
Q  120 tggcggatgctggtggatagaggtggtttgtggtatagagttttagttgccaagtatggcgaattaggtggcaggttggaggttgggggccgg 212  Q
    ||| || || | || |||||||  || |||||||||   |||||||| |||   | || |||| ||||||| ||||||||||| |||||||||    
T  23942728 tggaggttgttagttgatagagaagggttgtggtatcatgttttagtcgcccgttgtgacgaagtaggtgggaggttggaggtggggggccgg 23942636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 50 - 153
Target Start/End: Complemental strand, 12341278 - 12341175
Alignment:
Q  50 aaaggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaatggtgttggcggatgctggtggatagaggtggtttg 149  Q
    ||||||| |||| |||||||||||||||||||||||||| |||||||  ||||| ||||| || ||||||||| ||||| | ||||||||||| || |||    
T  12341278 aaaggagaatgggggtttgggggtgagacagttgaaggaatttaatatggctttgttaggaaagtggtgttggaggatgttagtggatagaggagggttg 12341179  T
Q  150 tggt 153  Q
    ||||    
T  12341178 tggt 12341175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 66 - 220
Target Start/End: Complemental strand, 36025216 - 36025062
Alignment:
Q  66 ttgggggtgagacagttgaaggagtttaataatgctttcttagggaaatggtgttggcggatgctggtggatagaggtggtttgtggtatagagttttag 165  Q
    ||||||||||| |||||||  || ||||||| |||||| |||||  ||||||||||||||||| ||||||||||||| || || |||||||||||||| |    
T  36025216 ttgggggtgaggcagttgagtgaatttaatattgctttattaggataatggtgttggcggatgttggtggatagaggagggttatggtatagagttttgg 36025117  T
Q  166 ttgccaagtatggcgaattaggtggcaggttggaggttgggggccggagtgtttc 220  Q
    | || |  ||||| ||    | |||  ||||||||||||||| ||||||||||||    
T  36025116 tggcgagatatggtgaggaggctgggcggttggaggttggggaccggagtgtttc 36025062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 50 - 236
Target Start/End: Original strand, 37165550 - 37165736
Alignment:
Q  50 aaaggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaatggtgttggcggatgctggtggatagaggtggtttg 149  Q
    ||||||| |||| |||||||||||||| | ||||||||| ||||||| |||| | ||||| || || |||||| ||||| | ||||||||||| || |||    
T  37165550 aaaggagaatgggggtttgggggtgaggcggttgaaggaatttaatattgctctattaggaaagtgatgttggaggatgttagtggatagaggaggcttg 37165649  T
Q  150 tggtatagagttttagttgccaagtatggcgaattaggtggcaggttggaggttgggggccggagtgtttcgtgttggtggagggag 236  Q
    |||||||| ||  | || || |  ||||||||    | |||  ||||||||||||||||||||||||||||   |||||||||||||    
T  37165650 tggtatagggtactggtggcgagatatggcgaggaggatgggcggttggaggttgggggccggagtgtttctacttggtggagggag 37165736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 56 - 145
Target Start/End: Complemental strand, 6245787 - 6245698
Alignment:
Q  56 gtatggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaatggtgttggcggatgctggtggatagaggtgg 145  Q
    ||||||||| |||||||||||  ||||| ||||||||||||  ||||| ||||| |||| ||||||||||||| ||||||||||||||||    
T  6245787 gtatggagggttgggggtgaggaagttgcaggagtttaatagcgctttgttaggtaaattgtgttggcggatgttggtggatagaggtgg 6245698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 50 - 238
Target Start/End: Original strand, 11393777 - 11393965
Alignment:
Q  50 aaaggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaatggtgttggcggatgctggtggatagaggtggtttg 149  Q
    |||||||| |||||| |||||||| ||    |||| ||||||||||  ||| || ||||| |||||||||||| || || |||| |||||||  ||||||    
T  11393777 aaaggagtctggagggttgggggttaggtgattgagggagtttaattttgcattgttaggtaaatggtgttggaggttgttggtcgatagagtaggtttg 11393876  T
Q  150 tggtatagagttttagttgccaagtatggcgaattaggtggcaggttggaggttgggggccggagtgtttcgtgttggtggagggaggt 238  Q
    |||||||| ||| | || |||   ||||||||  | ||||| |||||||||   ||||||||||||  ||| | |||||||||||||||    
T  11393877 tggtatagtgttcttgtcgcccgttatggcgaggttggtgggaggttggagtcggggggccggagttgttcttcttggtggagggaggt 11393965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 106 - 238
Target Start/End: Original strand, 44082497 - 44082629
Alignment:
Q  106 tagggaaatggtgttggcggatgctggtggatagaggtggtttgtggtatagagttttagttgccaagtatggcgaattaggtggcaggttggaggttgg 205  Q
    |||| |||||||||||| ||||| | || |||||||  || |||||||||   |||||||| |||   ||||||||| ||||||| ||||||||||| ||    
T  44082497 taggtaaatggtgttggaggatgttagttgatagagaagggttgtggtatcaggttttagtcgcccgttatggcgaagtaggtgggaggttggaggtggg 44082596  T
Q  206 gggccggagtgtttcgtgttggtggagggaggt 238  Q
    ||| ||||||||||| |  |||||| |||||||    
T  44082597 gggtcggagtgtttctttgtggtggcgggaggt 44082629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 49 - 236
Target Start/End: Complemental strand, 25193800 - 25193613
Alignment:
Q  49 aaaaggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaatggtgttggcggatgctggtggatagaggtggttt 148  Q
    ||||||||| |||||| ||||| ||||| ||||| | ||| ||||||  |||||| ||||| |||||||| ||| ||||| |||||||||||| ||| ||    
T  25193800 aaaaggagtttggaggattgggtgtgaggcagttaagggaatttaattgtgctttattaggaaaatggtgctggaggatgttggtggatagagatgggtt 25193701  T
Q  149 gtggtatagagttttagttgccaagtatggcgaattaggtggcaggttggaggttgggggccggagtgtttcgtgttggtggagggag 236  Q
     |||||| | || || || |    |||||| ||    | ||| ||||||||||| ||||||||||||| ||| | |||||||||||||    
T  25193700 ctggtatcgggtgttggtggtgcggtatggtgaggaggctgggaggttggaggtagggggccggagtgattcttattggtggagggag 25193613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 67 - 157
Target Start/End: Complemental strand, 15439811 - 15439721
Alignment:
Q  67 tgggggtgagacagttgaaggagtttaataatgctttcttagggaaatggtgttggcggatgctggtggatagaggtggtttgtggtatag 157  Q
    ||||||| || ||||||| ||||||||||| ||| ||  |||| ||||||||||||| |||| ||||| |||||| |||||| ||||||||    
T  15439811 tgggggttaggcagttgagggagtttaatagtgccttactaggtaaatggtgttggcagatgttggtgaatagagatggtttatggtatag 15439721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 67 - 157
Target Start/End: Complemental strand, 15531115 - 15531025
Alignment:
Q  67 tgggggtgagacagttgaaggagtttaataatgctttcttagggaaatggtgttggcggatgctggtggatagaggtggtttgtggtatag 157  Q
    ||||||| || ||||||| ||||||||||| ||| ||  |||| ||||||||||||| |||| ||||| |||||| |||||| ||||||||    
T  15531115 tgggggttaggcagttgagggagtttaatagtgccttactaggtaaatggtgttggcagatgttggtgaatagagatggtttatggtatag 15531025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 51 - 157
Target Start/End: Complemental strand, 24794456 - 24794350
Alignment:
Q  51 aaggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaatggtgttggcggatgctggtggatagaggtggtttgt 150  Q
    ||||||| |||||| |||||||| ||    |||| ||||||||||  |||||| ||||| |||||||||||| ||||| |||| |||||||  |||||||    
T  24794456 aaggagtctggagggttgggggttaggagattgagggagtttaattttgctttgttaggtaaatggtgttggaggatgttggtagatagagtaggtttgt 24794357  T
Q  151 ggtatag 157  Q
    |||||||    
T  24794356 ggtatag 24794350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 51 - 236
Target Start/End: Original strand, 29721341 - 29721525
Alignment:
Q  51 aaggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaatggtgttggcggatgctggtggatagaggtggtttgt 150  Q
    ||||||||||| |||| ||| |||||  | |||||||||||||||  ||| || ||||| |||||||||||| ||||| | || |||  |||||| ||||    
T  29721341 aaggagtatgggggtt-gggtgtgaggaaattgaaggagtttaatcttgcgttgttaggcaaatggtgttggaggatgttagttgatcaaggtgggttgt 29721439  T
Q  151 ggtatagagttttagttgccaagtatggcgaattaggtggcaggttggaggttgggggccggagtgtttcgtgttggtggagggag 236  Q
    ||||||| ||||| || || |  ||||| ||      ||| ||||||||||| |||||||||||||| || | |||||||||||||    
T  29721440 ggtatagggttttggtggcgagatatggtgaggagcctgggaggttggaggtagggggccggagtgtctcttattggtggagggag 29721525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 438 - 498
Target Start/End: Original strand, 19384544 - 19384599
Alignment:
Q  438 cggggggttatgtggaggtggagacgtcgtttgtggcagtgggaggaggagatgttagtgg 498  Q
    |||||||||||||||||||||||| |||     ||||||||||||||||||||||||||||    
T  19384544 cggggggttatgtggaggtggagatgtc-----tggcagtgggaggaggagatgttagtgg 19384599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 50 - 151
Target Start/End: Original strand, 16048345 - 16048446
Alignment:
Q  50 aaaggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaatggtgttggcggatgctggtggatagaggtggtttg 149  Q
    ||||||||||||||| ||||||   || ||| ||| ||||||||| |  ||| | ||||| |||||||||||| ||||| || |||||||||| ||||||    
T  16048345 aaaggagtatggagggttggggactaggcagatgagggagtttaacatggctcttttaggtaaatggtgttggaggatgttgatggatagagggggtttg 16048444  T
Q  150 tg 151  Q
    ||    
T  16048445 tg 16048446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 42 - 230
Target Start/End: Complemental strand, 6901627 - 6901440
Alignment:
Q  42 tgttccaaaaaggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaatggtgttggcggatgctggtggatagag 141  Q
    ||||| ||||||||| | ||||| |||||||| ||  |||||||||||||| ||  ||||||  ||   |||||||||||  ||||| | | ||||| |     
T  6901627 tgttctaaaaaggagcaaggagggttgggggtaaggaagttgaaggagtttcatcttgctttactacataaatggtgttgtaggatgttag-ggataaac 6901529  T
Q  142 gtggtttgtggtatagagttttagttgccaagtatggcgaattaggtggcaggttggaggttgggggccggagtgtttcgtgttggtgg 230  Q
      ||||||||||||   |||||||| |||   ||||||||  ||||||| |||||||||||||||||||| |||| ||| | |||||||    
T  6901528 aaggtttgtggtatcatgttttagtcgcccgttatggcgaggtaggtgggaggttggaggttgggggccgaagtggttcttcttggtgg 6901440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 103 - 166
Target Start/End: Complemental strand, 8902485 - 8902422
Alignment:
Q  103 tcttagggaaatggtgttggcggatgctggtggatagaggtggtttgtggtatagagttttagt 166  Q
    ||||||| |||||||||||||||||| | || ||||||| ||| ||||||||||| || |||||    
T  8902485 tcttaggaaaatggtgttggcggatgttagttgatagagctggcttgtggtatagggtgttagt 8902422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 53 - 152
Target Start/End: Complemental strand, 17700188 - 17700089
Alignment:
Q  53 ggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaatggtgttggcggatgctggtggatagaggtggtttgtgg 152  Q
    |||||||||||| ||||| |||||   |||||  |||||||| | |||||| || |||||||||||||||||| || | || ||||| || |||||||||    
T  17700188 ggagtatggagggttgggtgtgaggaggttgagagagtttaacattgctttgttggggaaatggtgttggcggctgttagttgataggggaggtttgtgg 17700089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 157
Target Start/End: Complemental strand, 18187821 - 18187750
Alignment:
Q  86 ggagtttaataatgctttcttagggaaatggtgttggcggatgctggtggatagaggtggtttgtggtatag 157  Q
    ||||||||| | |||||| ||||| |||||||||||| |  || | || |||||||||||||||||||||||    
T  18187821 ggagtttaacactgctttgttaggtaaatggtgttggagattgttagtagatagaggtggtttgtggtatag 18187750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 192 - 238
Target Start/End: Complemental strand, 4331759 - 4331713
Alignment:
Q  192 aggttggaggttgggggccggagtgtttcgtgttggtggagggaggt 238  Q
    |||||||||||||||| |||||||||||| | | |||||||||||||    
T  4331759 aggttggaggttggggaccggagtgtttcttctcggtggagggaggt 4331713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 53 - 205
Target Start/End: Original strand, 45255267 - 45255419
Alignment:
Q  53 ggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaatggtgttggcggatgctggtggatagaggtggtttgtgg 152  Q
    ||||| |||||||||||||||||||| |||| | || ||||||   ||||| ||||| || || |||||| || || | || |||||  |||| || ||     
T  45255267 ggagtttggaggtttgggggtgagacggttggaagaatttaatttggctttgttaggtaagtgatgttggaggttgttagttgataggagtggcttttgc 45255366  T
Q  153 tatagagttttagttgccaagtatggcgaattaggtggcaggttggaggttgg 205  Q
     || |||| ||||| ||| | ||||||||| ||||||| ||||||| ||||||    
T  45255367 catcgagtcttagtcgcccattatggcgaagtaggtgggaggttgggggttgg 45255419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 246; Significance: 1e-136; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 6 - 398
Target Start/End: Original strand, 3941 - 4338
Alignment:
Q  6 cataggataattagttggataggatggaaaactgtttgttccaaaaaggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttct 105  Q
    ||||||| |||||| |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||| | |    
T  3941 cataggaaaattagctggataggatggaaaactatttgttcaaaaaaggagtatggaggtttgggggtgagacagttgaaggagtttaatagtgctctgt 4040  T
Q  106 tagggaaatggtgttggcggatgctggtggatagaggtggtttgtggtatagagttttagttgccaagtatggcgaattaggtggcaggttggaggttgg 205  Q
    ||||||||||||||||||||||| |||||||||||| ||||||||||||||| ||||||||||||| |||||||||||||||||||       |||||||    
T  4041 tagggaaatggtgttggcggatgttggtggatagagatggtttgtggtatagggttttagttgccaggtatggcgaattaggtggc-------aggttgg 4133  T
Q  206 gggccggagtgtttcgtgttggtggagggaggtgagtcgtcttaggggtagtgatggtgatggagagggcggctggtttgttgatcgtgtggctagcagg 305  Q
    |||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||| |||| ||||||||||||| ||||||| | |||    
T  4134 gggccggagtgtttcgtggtggtggagggaggtgagtcgtattaggggtagtgatggtgatggagagagcggttggtttgttgatcatgtggctcggagg 4233  T
Q  306 gttggagat------------ttgttttggtttgataggtggttaggggatgttcctttttgtgtccgttttagtagactgttagagttaacagagaata 393  Q
    |||||||||            ||||||||||| ||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||| ||||||||    
T  4234 gttggagatggagctcatacgttgttttggttggataggtggttaggggatgttcctttttgtgtccgttttcgtaggctgtttgagttaatagagaata 4333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 246; Significance: 1e-136; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 14 - 495
Target Start/End: Complemental strand, 45422267 - 45421773
Alignment:
Q  14 aattagttggataggatggaaaactgtttgttccaaaaaggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaa 113  Q
    ||||| ||||||||| ||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||| ||||||| |||||| ||||| |||    
T  45422267 aattacttggataggctggaaaactgtttgttccacaaaggagaatggaggtttgggggtgagacagttgaaggaatttaatagtgctttgttaggtaaa 45422168  T
Q  114 tggtgttggcggatgctggtggatagaggtggtttgtggtatagagttttagttgccaagtatggcgaattaggtggcaggttggaggttgggggccgga 213  Q
    ||||||||||||||| ||||||| | |||||||||||||||||| || |||||||||| |||||||||||||||||||||||||||||||||||| ||||    
T  45422167 tggtgttggcggatgttggtggacaaaggtggtttgtggtatagtgtcttagttgccaggtatggcgaattaggtggcaggttggaggttgggggtcgga 45422068  T
Q  214 gtgtttcgtgttggtggagggaggtgagtcgtcttaggggtagtgatggtgatggagagggcggctggtttgttgatcgtgtggctagcagggttggaga 313  Q
    |||| ||||||||||||||||||||||||||| |||||| ||||| |||||| || ||  | || ||||||| || ||  |||||||| |||||||| ||    
T  45422067 gtgtgtcgtgttggtggagggaggtgagtcgtattagggatagtgctggtgagggtgactgtgggtggtttggtggtcacgtggctaggagggttggtga 45421968  T
Q  314 t------------ttgttttggtttgataggtggttaggggatgttcctttttgtgtccgttttagtagactgttagagttaacagagaataagttcatg 401  Q
    |            ||||||||||| ||||||||||||||||||||||| || |||||||||||| ||||| |||| |||||||||||||||||| |||||    
T  45421967 tggttctgatacgttgttttggttggataggtggttaggggatgttccgttctgtgtccgttttcgtagattgtttgagttaacagagaataagctcatg 45421868  T
Q  402 tctgtggcaaacttgttctctgttgattcggagcagc-ggggggttatgtggaggtggagacgtcgtttgtggcagtgggaggaggagatgttag 495  Q
    | ||||||| |||||||||||||||||  |||||||| ||||  || | ||||||||||| ||| | |||| |||||||||||||||||||||||    
T  45421867 tatgtggcagacttgttctctgttgatctggagcagcaggggttttttttggaggtggaggcgtagattgtcgcagtgggaggaggagatgttag 45421773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 34 - 488
Target Start/End: Original strand, 26894025 - 26894491
Alignment:
Q  34 aaactgtttgttccaaaaaggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaatggtgttggcggatgctggt 133  Q
    ||||||||||||  ||| |||||||||  |||||||||||| |  |||||||||||||||||    |||| ||||| |||||||||||||||||| ||||    
T  26894025 aaactgtttgtttaaaagaggagtatgacggtttgggggtgcggaagttgaaggagtttaatttaactttgttaggaaaatggtgttggcggatgttggt 26894124  T
Q  134 ggatagaggtggtttgtggtatagagttttagttgccaagtatggcgaattaggtggcaggttggaggttgggggccggagtgtttcgtgttggtggagg 233  Q
    ||| | |||||||||||||||||| |||||||| |||| |||||||||| ||||||||||||||||||||||||||||||||||||| || ||||||  |    
T  26894125 ggacataggtggtttgtggtatagggttttagtcgccaggtatggcgaaataggtggcaggttggaggttgggggccggagtgtttcttgctggtggtcg 26894224  T
Q  234 gaggtgagtcgtcttaggggtagtgatggtgatggagagggcggctggtttgttgatcgtgtggctagcagggttggaga------------tttgtttt 321  Q
    |||||||| || ||||||| ||| |  || ||||| |   |||| |||||||  ||||  |||   || || ||||| ||            || |||||    
T  26894225 gaggtgaggcgacttagggatagggtaggcgatggtggtagcgggtggtttgaggatcaggtgttgaggagagttggtgatggggttgacacttcgtttt 26894324  T
Q  322 ggtttgataggtggttaggggatgttcctttttgtgtccgttttagtagactgttagagttaacagagaataagttcatgtctgtggcaaacttgttctc 421  Q
    ||| |||||||||| ||||||| | |||| ||||||| || |||||  |  |||| |||||||||||||||||||  ||||||||  |  ||||| ||||    
T  26894325 ggtctgataggtggataggggaggctcctctttgtgtgcggtttaggcggttgtttgagttaacagagaataagtctatgtctgtcaccgacttgctctc 26894424  T
Q  422 tgttgattcggagcagcggggggttatgtggaggtggagacgtcgtttgtggcagtgggaggaggag 488  Q
    ||||| |||||||| | |||||    ||||||||||||||||| | || ||||||||||||||||||    
T  26894425 tgttgcttcggagcggtgggggaaggtgtggaggtggagacgtaggttatggcagtgggaggaggag 26894491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 34 - 488
Target Start/End: Original strand, 26899464 - 26899930
Alignment:
Q  34 aaactgtttgttccaaaaaggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaatggtgttggcggatgctggt 133  Q
    ||||||||||||  ||| |||||||||  |||||||||||| |  |||||||||||||||||    |||| ||||| |||||||||||||||||| ||||    
T  26899464 aaactgtttgtttaaaagaggagtatgacggtttgggggtgcggaagttgaaggagtttaatttaactttgttaggaaaatggtgttggcggatgttggt 26899563  T
Q  134 ggatagaggtggtttgtggtatagagttttagttgccaagtatggcgaattaggtggcaggttggaggttgggggccggagtgtttcgtgttggtggagg 233  Q
    ||| | |||||||||||||||||| |||||||| |||| |||||||||| ||||||||||||||||||||||||||||||||||||| || ||||||  |    
T  26899564 ggacataggtggtttgtggtatagggttttagtcgccaggtatggcgaaataggtggcaggttggaggttgggggccggagtgtttcttgctggtggtcg 26899663  T
Q  234 gaggtgagtcgtcttaggggtagtgatggtgatggagagggcggctggtttgttgatcgtgtggctagcagggttggaga------------tttgtttt 321  Q
    |||||||| || ||||||| ||| |  || ||||| |   |||| |||||||  ||||  |||   || || ||||| ||            || |||||    
T  26899664 gaggtgaggcgacttagggatagggtaggcgatggtggtagcgggtggtttgaggatcaggtgttgaggagagttggtgatggggttgacacttcgtttt 26899763  T
Q  322 ggtttgataggtggttaggggatgttcctttttgtgtccgttttagtagactgttagagttaacagagaataagttcatgtctgtggcaaacttgttctc 421  Q
    ||| |||||||||| ||||||| | |||| ||||||| || |||||  |  |||| |||||||||||||||||||  ||||||||  |  ||||| ||||    
T  26899764 ggtctgataggtggataggggaggctcctctttgtgtgcggtttaggcggttgtttgagttaacagagaataagtctatgtctgtcaccgacttgctctc 26899863  T
Q  422 tgttgattcggagcagcggggggttatgtggaggtggagacgtcgtttgtggcagtgggaggaggag 488  Q
    ||||| |||||||| | |||||    ||||||||||||||||| | || ||||||||||||||||||    
T  26899864 tgttgcttcggagcggtgggggaaggtgtggaggtggagacgtaggttatggcagtgggaggaggag 26899930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 34 - 487
Target Start/End: Complemental strand, 13550844 - 13550386
Alignment:
Q  34 aaactgtttgttccaaaaaggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaatggtgttggcggatgctggt 133  Q
    ||||||||||||  |||||||||| ||| ||||||||||||||    ||||||||||||||||  || || |||||||||||||||||| || || ||||    
T  13550844 aaactgtttgtttaaaaaaggagtgtggcggtttgggggtgaggagattgaaggagtttaatatagcattgttagggaaatggtgttggaggttgttggt 13550745  T
Q  134 ggatagaggtggtttgtggtatagagttttagttgccaagtatggcgaattaggtggcaggttggaggttgggggccggagtgtttcgtgttggtggagg 233  Q
     |||||||||| |||||||||||| |||||||||||||  |||||||||||||||||||||       ||||||||||||| ||||| |||||||||  |    
T  13550744 tgatagaggtgatttgtggtatagggttttagttgccagatatggcgaattaggtggcagg-------ttgggggccggagagtttcttgttggtggtcg 13550652  T
Q  234 gaggtgagtcgtcttaggggtagtgatggtgatggagagggcggctggtttgttgatcgtgtggctagcagggttggagat------------ttgtttt 321  Q
    ||||||||||||||||||||||| | ||||| ||| |   ||||||||||||  ||||  |||   || || ||||| |||            |  ||||    
T  13550651 gaggtgagtcgtcttaggggtagggttggtgttggtggtagcggctggtttgaggatcaggtgttgaggagagttggtgatggggcagatacatcatttt 13550552  T
Q  322 ggtttgataggtggttaggggatgttcctttttgtgtccgttttagtagactgttagagttaacagagaataagttcatgtctgtggcaaacttgttctc 421  Q
    |||| ||||||||| ||||||| | |||| || ||||  | |||||| |  |||| |||||||||||||||||||  || |  |||||  ||||| | ||    
T  13550551 ggttcgataggtggataggggaggctcctcttcgtgtgaggtttagtcggttgtttgagttaacagagaataagtctatattcgtggcggacttgctttc 13550452  T
Q  422 tgttgattcggagcagcggggggttatgtggaggtggagacgtcgtttgtggcagtgggaggagga 487  Q
    |||||||||||||||| |||||| | ||||||||||||||||| | || ||||||||||| |||||    
T  13550451 tgttgattcggagcagtggggggatgtgtggaggtggagacgtaggttatggcagtgggatgagga 13550386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 34 - 285
Target Start/End: Complemental strand, 13551297 - 13551053
Alignment:
Q  34 aaactgtttgttccaaaaaggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaatggtgttggcggatgctggt 133  Q
    ||||||||||||  |||||||||| ||| ||||||||||||||    ||||||||||||||||  || || |||||||||||||||||| || || ||||    
T  13551297 aaactgtttgtttaaaaaaggagtgtggcggtttgggggtgaggagattgaaggagtttaatatagcattgttagggaaatggtgttggaggttgttggt 13551198  T
Q  134 ggatagaggtggtttgtggtatagagttttagttgccaagtatggcgaattaggtggcaggttggaggttgggggccggagtgtttcgtgttggtggagg 233  Q
     |||||||||| |||||||||||| |||||||||||||  |||||||||||||||||||||       ||||||||||||| ||||| |||||||||  |    
T  13551197 tgatagaggtgatttgtggtatagggttttagttgccagatatggcgaattaggtggcagg-------ttgggggccggagagtttcttgttggtggtcg 13551105  T
Q  234 gaggtgagtcgtcttaggggtagtgatggtgatggagagggcggctggtttg 285  Q
    ||||||||||||||||||||||| | ||||| ||| |   ||||||||||||    
T  13551104 gaggtgagtcgtcttaggggtagggttggtgttggtggtagcggctggtttg 13551053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 59 - 239
Target Start/End: Complemental strand, 11028572 - 11028392
Alignment:
Q  59 tggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaatggtgttggcggatgctggtggatagaggtggtttgtggtataga 158  Q
    ||||||||| ||||||||||||||||||||||||||| | ||||| ||||| || ||||||||| ||||||| || |||||  |||||||||||||  ||    
T  11028572 tggaggtttaggggtgagacagttgaaggagtttaatcaggctttgttaggaaagtggtgttggaggatgcttgttgataggagtggtttgtggtaccga 11028473  T
Q  159 gttttagttgccaagtatggcgaattaggtggcaggttggaggttgggggccggagtgtttcgtgttggtggagggaggtg 239  Q
    |||||||| |||   || |||||| ||||||| |||||||||| |||||||| ||||  ||| | ||||||||| ||||||    
T  11028472 gttttagtcgcccgttacggcgaagtaggtggaaggttggaggatgggggccagagttgttcttcttggtggagagaggtg 11028392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 49 - 238
Target Start/End: Complemental strand, 15018389 - 15018200
Alignment:
Q  49 aaaaggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaatggtgttggcggatgctggtggatagaggtggttt 148  Q
    ||||||||| |||||| ||  |||| |||||||||||||||||||||| ||| || |||||||||||||||||| || ||   |||||||| ||||| ||    
T  15018389 aaaaggagtttggagggttatgggttagacagttgaaggagtttaatattgccttattagggaaatggtgttggaggttgtcagtggataggggtggatt 15018290  T
Q  149 gtggtatagagttttagttgccaagtatggcgaattaggtggcaggttggaggttgggggccggagtgtttcgtgttggtggagggaggt 238  Q
     ||||||||||||||||| ||    ||||||||| || |||| |||||||||||||||||||| |||  ||| | ||||||| |||||||    
T  15018289 ttggtatagagttttagtcgctcgttatggcgaagtatgtgggaggttggaggttgggggccgaagttgttcttcttggtggcgggaggt 15018200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 20 - 238
Target Start/End: Complemental strand, 35488578 - 35488360
Alignment:
Q  20 ttggataggatggaaaactgtttgttccaaaaaggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaatggtgt 119  Q
    ||||||||| ||||| ||||| ||||| |||| |||| |||||||||||||||| ||  |||||||||||||||||  ||||||  |||| |||||||||    
T  35488578 ttggataggttggaatactgtgtgttctaaaatggagcatggaggtttgggggttaggaagttgaaggagtttaatgttgctttactaggtaaatggtgt 35488479  T
Q  120 tggcggatgctggtggatagaggtggtttgtggtatagagttttagttgccaagtatggcgaattaggtggcaggttggaggttgggggccggagtgttt 219  Q
    ||| || || | || |||||||  || |||||||||   |||||||| |||   ||||||||| ||||||| ||||||||||| |||||||| |||| ||    
T  35488478 tggaggttgttagttgatagagaagggttgtggtatcatgttttagtcgcccgttatggcgaagtaggtgggaggttggaggtggggggccgaagtggtt 35488379  T
Q  220 cgtgttggtggagggaggt 238  Q
    | |  |||||| |||||||    
T  35488378 cttcgtggtggcgggaggt 35488360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 42 - 238
Target Start/End: Original strand, 28399971 - 28400167
Alignment:
Q  42 tgttccaaaaaggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaatggtgttggcggatgctggtggatagag 141  Q
    ||||| |||||||||| ||||||||||||||| || |  |||||||||||||||| ||||||  |||| |||||||||||| ||||| | || |||||||    
T  28399971 tgttcaaaaaaggagtttggaggtttgggggttaggcgattgaaggagtttaatattgctttactaggtaaatggtgttggaggatgttagtcgatagag 28400070  T
Q  142 gtggtttgtggtatagagttttagttgccaagtatggcgaattaggtggcaggttggaggttgggggccggagtgtttcgtgttggtggagggaggt 238  Q
      ||  ||||||||   |||||||| ||    ||||||||| ||||||| ||||||||||| ||||||||||||||||| |  |||||| |||||||    
T  28400071 aagggatgtggtatcaggttttagtcgctcgttatggcgaagtaggtgggaggttggaggtggggggccggagtgtttctttgtggtggcgggaggt 28400167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 14 - 239
Target Start/End: Original strand, 9668399 - 9668624
Alignment:
Q  14 aattagttggataggatggaaaactgtttgttccaaaaaggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaa 113  Q
    ||||| ||||||||| ||||| ||| | |||||   |||||||| || ||| |||||||| ||   ||||| |||||||||   |||||| ||||| |||    
T  9668399 aattacttggataggttggaatactttgtgttctccaaaggagtctgaagggttgggggttaggaggttgagggagtttaactttgctttgttaggtaaa 9668498  T
Q  114 tggtgttggcggatgctggtggatagaggtggtttgtggtatagagttttagttgccaagtatggcgaattaggtggcaggttggaggttgggggccgga 213  Q
    | ||||||| ||||| |||| |||||||  || ||||||||||| ||| |||| |||   ||||||||  | || || ||||||||||||||||||||||    
T  9668499 tagtgttggaggatgttggtagatagagtagggttgtggtatagtgttctagtcgcccgttatggcgaggttggagggaggttggaggttgggggccgga 9668598  T
Q  214 gtgtttcgtgttggtggagggaggtg 239  Q
    ||  ||| | ||||||||||||||||    
T  9668599 gttgttcttattggtggagggaggtg 9668624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 53 - 236
Target Start/End: Complemental strand, 1380790 - 1380607
Alignment:
Q  53 ggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaatggtgttggcggatgctggtggatagaggtggtttgtgg 152  Q
    ||||| |||||||||||||||||||| |||||| || || |||   | ||| ||||  || ||||||||| ||||||| || |||||  |||| || |||    
T  1380790 ggagtttggaggtttgggggtgagacggttgaaagaattcaatttggatttattagaaaagtggtgttggaggatgctagttgataggagtggcttttgg 1380691  T
Q  153 tatagagttttagttgccaagtatggcgaattaggtggcaggttggaggttgggggccggagtgtttcgtgttggtggagggag 236  Q
    ||| |||| ||||| |||   ||||||||| |||| || ||||||||||||||||||||||||  ||| | |||||||||||||    
T  1380690 tatcgagtcttagtcgcccgttatggcgaagtaggcgggaggttggaggttgggggccggagttgttcttcttggtggagggag 1380607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 53 - 235
Target Start/End: Complemental strand, 11197059 - 11196877
Alignment:
Q  53 ggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaatggtgttggcggatgctggtggatagaggtggtttgtgg 152  Q
    |||||||||||| |||||||| ||   |||| |||| |||||||  ||||| ||||| |||||||||||||| ||| ||||||||||||| || || |||    
T  11197059 ggagtatggagggttgggggtaaggaggttgcaggaatttaatagcgctttgttaggcaaatggtgttggcgaatgatggtggatagaggcgggttatgg 11196960  T
Q  153 tatagagttttagttgccaagtatggcgaattaggtggcaggttggaggttgggggccggagtgtttcgtgttggtggaggga 235  Q
    ||||| ||| | || ||   |||||| ||   || |||  |||||||||||||||||||||||||||| | ||||||| ||||    
T  11196959 tatagggttctggtagcgcggtatggtgagacagttgggcggttggaggttgggggccggagtgtttcatcttggtggcggga 11196877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 49 - 215
Target Start/End: Original strand, 22724867 - 22725033
Alignment:
Q  49 aaaaggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaatggtgttggcggatgctggtggatagaggtggttt 148  Q
    |||||||||  |||||||||| ||| |  ||||||||||| ||||||  ||| ||  |||| |||||||||||| ||||| | |||||||| ||||||||    
T  22724867 aaaaggagttcggaggtttggaggttaagcagttgaaggaatttaatgttgccttactaggaaaatggtgttggaggatgttagtggataggggtggttt 22724966  T
Q  149 gtggtatagagttttagttgccaagtatggcgaattaggtggcaggttggaggttgggggccggagt 215  Q
     ||||||| || | |||| ||| | ||||||||  |||| || |||||||||| |||||||||||||    
T  22724967 ttggtataaagatatagtcgcccactatggcgaggtaggcgggaggttggaggatgggggccggagt 22725033  T

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Target: chr2; HSP #14
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 14 - 166
Target Start/End: Original strand, 11233883 - 11234035
Alignment:
Q  14 aattagttggataggatggaaaactgtttgttccaaaaaggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaa 113  Q
    ||||| ||||||||| ||||| ||| | |||||   |||||||| |||||| |||||||| ||  |||||| ||||||||||  |||||| ||||| |||    
T  11233883 aattacttggataggttggaatactttgtgttcttcaaaggagtctggagggttgggggttaggaagttgagggagtttaattttgctttgttaggtaaa 11233982  T
Q  114 tggtgttggcggatgctggtggatagaggtggtttgtggtatagagttttagt 166  Q
    |||||||||  |||| |||| |||||||  |||||||||||||| ||| ||||    
T  11233983 tggtgttggacgatgttggtagatagagtaggtttgtggtatagtgttctagt 11234035  T

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Target: chr2; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 317 - 488
Target Start/End: Complemental strand, 43627931 - 43627760
Alignment:
Q  317 gttttggtttgataggtggttaggggatgttcctttttgtgtccgttttagtagactgttagagttaacagagaataagttcatgtctgtggcaaacttg 416  Q
    |||| ||| |||||||||| |||||||   |||| ||||||| || |||||  |  |||| |||||||||||||||||||  ||||  |||||  |||||    
T  43627931 gtttaggtctgataggtggataggggagtctcctctttgtgtgcggtttaggcggttgtttgagttaacagagaataagtctatgttcgtggccgacttg 43627832  T
Q  417 ttctctgttgattcggagcagcggggggttatgtggaggtggagacgtcgtttgtggcagtgggaggaggag 488  Q
     ||||| |||||||||||  | ||||||   ||||||||||||||||| | || ||||||||||||||||||    
T  43627831 ctctctattgattcggagaggtggggggaggtgtggaggtggagacgtaggttatggcagtgggaggaggag 43627760  T

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Target: chr2; HSP #16
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 49 - 198
Target Start/End: Original strand, 25380822 - 25380971
Alignment:
Q  49 aaaaggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaatggtgttggcggatgctggtggatagaggtggttt 148  Q
    |||||||||||||||| ||| |||| |||||||||||||| ||||||  ||| || ||  |||||||||| | | ||||  | |||||||| ||||||||    
T  25380822 aaaaggagtatggagggttgagggttagacagttgaaggaatttaatgttgccttattgtggaaatggtgctagaggatattagtggataggggtggttt 25380921  T
Q  149 gtggtatagagttttagttgccaagtatggcgaattaggtggcaggttgg 198  Q
     ||||||||| ||||||| |||   ||||||||  ||||||| |||||||    
T  25380922 ttggtatagaattttagtcgcccgttatggcgaggtaggtgggaggttgg 25380971  T

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Target: chr2; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 50 - 154
Target Start/End: Original strand, 44028649 - 44028753
Alignment:
Q  50 aaaggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaatggtgttggcggatgctggtggatagaggtggtttg 149  Q
    ||||||||||||||||||||| || ||||||||||||||||||||| | || ||  |||| || ||||| ||| ||||| | |||||||||| ||| |||    
T  44028649 aaaggagtatggaggtttgggtgttagacagttgaaggagtttaatgaggcgttgctaggtaagtggtgctggaggatgttagtggatagagatgggttg 44028748  T
Q  150 tggta 154  Q
    |||||    
T  44028749 tggta 44028753  T

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Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 40 - 163
Target Start/End: Complemental strand, 6824132 - 6824009
Alignment:
Q  40 tttgttccaaaaaggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaatggtgttggcggatgctggtggatag 139  Q
    ||||||| ||||||||| ||| ||| ||||| ||||| ||||||||||||||||||   || || ||| | |||||||||||| | ||| ||||||||||    
T  6824132 tttgttcaaaaaaggagcatgaagggttgggagtgaggcagttgaaggagtttaatttagccttattaagcaaatggtgttggagaatgttggtggatag 6824033  T
Q  140 aggtggtttgtggtatagagtttt 163  Q
    ||  || || |||||||| |||||    
T  6824032 agcggggttctggtatagggtttt 6824009  T

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Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 49 - 122
Target Start/End: Original strand, 33583855 - 33583928
Alignment:
Q  49 aaaaggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaatggtgttgg 122  Q
    |||||||||||||||| |||||||| || ||||||| |||||||||||  ||||| ||| | ||||||||||||    
T  33583855 aaaaggagtatggagggttgggggtaaggcagttgagggagtttaatatagctttgttaagtaaatggtgttgg 33583928  T

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Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 20 - 155
Target Start/End: Original strand, 8065660 - 8065795
Alignment:
Q  20 ttggataggatggaaaactgtttgttccaaaaaggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaatggtgt 119  Q
    ||||||||| ||||| ||  | ||||| ||||||||| |||||||||||||||| ||  |||||||| ||||||||  ||||||  |||| ||||| |||    
T  8065660 ttggataggttggaataccttgtgttctaaaaaggagcatggaggtttgggggtcaggaagttgaagaagtttaatgttgctttactaggtaaatgatgt 8065759  T
Q  120 tggcggatgctggtggatagaggtggtttgtggtat 155  Q
    ||| || || | || |||||||  || |||||||||    
T  8065760 tggaggttgttagttgatagagaagggttgtggtat 8065795  T

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Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 318 - 444
Target Start/End: Complemental strand, 13551008 - 13550882
Alignment:
Q  318 ttttggtttgataggtggttaggggatgttcctttttgtgtccgttttagtagactgttagagttaacagagaataagttcatgtctgtggcaaacttgt 417  Q
    |||||||| ||||||||| ||||||| | |||| || ||||  | |||||| |  |||| |||||||||||||||||||  || |  |||||  |||||     
T  13551008 ttttggttcgataggtggataggggaggctcctcttcgtgtgaggtttagtcggttgtttgagttaacagagaataagtctatattcgtggcggacttgc 13550909  T
Q  418 tctctgttgattcggagcagcgggggg 444  Q
    | |||||||||||||||||| ||||||    
T  13550908 tttctgttgattcggagcagtgggggg 13550882  T

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Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 48 - 166
Target Start/End: Complemental strand, 36804832 - 36804714
Alignment:
Q  48 aaaaaggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaatggtgttggcggatgctggtggatagaggtggtt 147  Q
    |||| |||| ||||| | |||||||| ||  ||||||| |||||||||| ||||||  |||| |||||||||||| ||||| | || || ||||  ||||    
T  36804832 aaaagggagcatggatggttgggggttaggaagttgaaagagtttaatattgctttactaggaaaatggtgttggaggatgttagtagagagagaaggtt 36804733  T
Q  148 tgtggtatagagttttagt 166  Q
    |||||||| | ||||||||    
T  36804732 tgtggtatcgtgttttagt 36804714  T

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Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 86 - 139
Target Start/End: Complemental strand, 21579703 - 21579650
Alignment:
Q  86 ggagtttaataatgctttcttagggaaatggtgttggcggatgctggtggatag 139  Q
    ||||||||||| |||||| |||||||| ||||||||| || |||||||||||||    
T  21579703 ggagtttaatagtgctttattagggaagtggtgttggaggttgctggtggatag 21579650  T

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Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 424 - 488
Target Start/End: Complemental strand, 33548197 - 33548133
Alignment:
Q  424 ttgattcggagcagcggggggttatgtggaggtggagacgtcgtttgtggcagtgggaggaggag 488  Q
    |||||||||||| | ||||||   ||||||||||||||||| | || ||||||||||||||||||    
T  33548197 ttgattcggagcggtggggggaggtgtggaggtggagacgtaggttatggcagtgggaggaggag 33548133  T

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Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 58 - 157
Target Start/End: Complemental strand, 20004662 - 20004563
Alignment:
Q  58 atggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaatggtgttggcggatgctggtggatagaggtggtttgtggtatag 157  Q
    |||||||||||||||| ||  || ||| ||||||||| | |||||| ||||  |||||||||||| ||||| | || ||||| || | ||||||||||||    
T  20004662 atggaggtttgggggttaggaagatgagggagtttaacactgctttgttagaaaaatggtgttggaggatgttagttgataggggagatttgtggtatag 20004563  T

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Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 424 - 495
Target Start/End: Original strand, 31085452 - 31085523
Alignment:
Q  424 ttgattcggagcagcggggggttatgtggaggtggagacgtcgtttgtggcagtgggaggaggagatgttag 495  Q
    ||||||| |||||| |||||| | |||||||||||||| |  | ||||| ||||||||||||||| ||||||    
T  31085452 ttgattcagagcagtggggggatgtgtggaggtggagatgcaggttgtgacagtgggaggaggagctgttag 31085523  T

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Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 194 - 236
Target Start/End: Original strand, 33583924 - 33583966
Alignment:
Q  194 gttggaggttgggggccggagtgtttcgtgttggtggagggag 236  Q
    ||||||||||||||| ||||||||||| | |||||||||||||    
T  33583924 gttggaggttgggggtcggagtgtttcttcttggtggagggag 33583966  T

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Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 192 - 220
Target Start/End: Complemental strand, 6823980 - 6823952
Alignment:
Q  192 aggttggaggttgggggccggagtgtttc 220  Q
    |||||||||||||||||||||||||||||    
T  6823980 aggttggaggttgggggccggagtgtttc 6823952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 243; Significance: 1e-134; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 243; E-Value: 1e-134
Query Start/End: Original strand, 20 - 495
Target Start/End: Original strand, 30166743 - 30167230
Alignment:
Q  20 ttggataggatggaaaactgtttgttccaaaaaggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaatggtgt 119  Q
    ||||||||  ||||||||||||||||||| ||||||| ||||||||||||||||||| ||||||||||| ||||||| |||||| ||||| |||||||||    
T  30166743 ttggatagactggaaaactgtttgttccacaaaggagaatggaggtttgggggtgaggcagttgaaggaatttaatagtgctttgttaggtaaatggtgt 30166842  T
Q  120 tggcggatgctggtggatagaggtggtttgtggtatagagttttagttgccaagtatggcgaattaggtggcaggttggaggttgggggccggagtgttt 219  Q
    ||||||||| |||| || |||||||||||||||||||| || |||||||||| ||||||||||||||||||||||||||||||||||||||| ||| | |    
T  30166843 tggcggatgttggttgacagaggtggtttgtggtatagtgtcttagttgccaggtatggcgaattaggtggcaggttggaggttgggggccgaagtatat 30166942  T
Q  220 cgtgttggtggagggaggtgagtcgtcttaggggtagtgatggtgatggagagggcggctggtttgttgatcgtgtggctagcagggttggagat----- 314  Q
    |||||||||||||||||||||||||| |||||| ||||| |||||| || ||  | || ||||||| || ||  |||||||| |||||||| |||         
T  30166943 cgtgttggtggagggaggtgagtcgtattagggatagtgctggtgagggtgactgtgggtggtttggtggtcacgtggctaggagggttggtgatggttc 30167042  T
Q  315 -------ttgttttggtttgataggtggttaggggatgttcctttttgtgtccgttttagtagactgttagagttaacagagaataagttcatgtctgtg 407  Q
           ||||||||||| ||||||||||||||||||||||| || |||||||||||| ||||| |||| |||||||||||||||||| |||||| ||||    
T  30167043 tgatacgttgttttggttggataggtggttaggggatgttccgttctgtgtccgttttcgtagattgtttgagttaacagagaataagctcatgtttgtg 30167142  T
Q  408 gcaaacttgttctctgttgattcggagcagcggggggttatgtggaggtggagacgtcgtttgtggcagtgggaggaggagatgttag 495  Q
    ||| |||||||||||||||||  |||||||| ||| ||| | ||||||||||| ||| | ||||||||||||||||||||||||||||    
T  30167143 gcagacttgttctctgttgatctggagcagcagggtgttttttggaggtggaggcgtagattgtggcagtgggaggaggagatgttag 30167230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 177; E-Value: 3e-95
Query Start/End: Original strand, 248 - 493
Target Start/End: Original strand, 49731559 - 49731816
Alignment:
Q  248 taggggtagtgatggtgatggagagggcggctggtttgttgatcgtgtggctagcagggttggagat------------ttgttttggtttgataggtgg 335  Q
    ||||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||||||||||            |||||||||||||||||||||    
T  49731559 taggggtagtgatggtgatggagagtgcggctggtttgttgatcatgtggctaggagggttggagatggagctgacacattgttttggtttgataggtgg 49731658  T
Q  336 ttaggggatgttcctttttgtgtccgttttagtagactgttagagttaacagagaataagttcatgtctgtggcaaacttgttctctgttgattcggagc 435  Q
    |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| ||||||| ||||||||||||||||| ||||||    
T  49731659 ttaggggatgttcctttttgtgtccgttttcgtagactgtttgagttaacagagaataagttcatgtatgtggcagacttgttctctgttgatccggagc 49731758  T
Q  436 agcggggggttatgtggaggtggagacgtcgtttgtggcagtgggaggaggagatgtt 493  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||    
T  49731759 agcggggggttatgtggaggtggagacgtagtttgtggcagtgggaggaggagttgtt 49731816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 34 - 252
Target Start/End: Original strand, 6175891 - 6176109
Alignment:
Q  34 aaactgtttgttccaaaaaggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaatggtgttggcggatgctggt 133  Q
    ||||||||||||  ||| | |||||| | |||||||||||| |  | |||||||||||||||   ||||| ||||| |||||||||||||||||||||||    
T  6175891 aaactgtttgtttaaaacatgagtattgcggtttgggggtgcggaaattgaaggagtttaatttagctttgttaggaaaatggtgttggcggatgctggt 6175990  T
Q  134 ggatagaggtggtttgtggtatagagttttagttgccaagtatggcgaattaggtggcaggttggaggttgggggccggagtgtttcgtgttggtggagg 233  Q
    ||| |||||||||||||||||||| |||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| || ||||||  |    
T  6175991 ggacagaggtggtttgtggtatagggttttagtcgccaggtatggcgaattaggtggcaggttggaggttgggggccggagtgtttcttgctggtggtcg 6176090  T
Q  234 gaggtgagtcgtcttaggg 252  Q
    |||||||| || |||||||    
T  6176091 gaggtgaggcgacttaggg 6176109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 81 - 241
Target Start/End: Complemental strand, 29310088 - 29309928
Alignment:
Q  81 ttgaaggagtttaataatgctttcttagggaaatggtgttggcggatgctggtggatagaggtggtttgtggtatagagttttagttgccaagtatggcg 180  Q
    |||||||||||||||   || || ||||| |||||||||||||||||| ||||||| | |||||||||||||||||| |||||||| |||| ||||| ||    
T  29310088 ttgaaggagtttaatttagcattgttaggaaaatggtgttggcggatgttggtggacaaaggtggtttgtggtatagggttttagtcgccaggtatgccg 29309989  T
Q  181 aattaggtggcaggttggaggttgggggccggagtgtttcgtgttggtggagggaggtgag 241  Q
    |||||||||||||||||||||||||||||||||| ||||| || ||||||  |||||||||    
T  29309988 aattaggtggcaggttggaggttgggggccggagagtttcttgctggtggtcggaggtgag 29309928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 14 - 238
Target Start/End: Complemental strand, 36709657 - 36709433
Alignment:
Q  14 aattagttggataggatggaaaactgtttgttccaaaaaggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaa 113  Q
    ||||| ||||||||| ||||| ||  | ||||| ||||||||| |||||||||||||||| ||  |||||||||||||||||| ||||||  |||| |||    
T  36709657 aattacttggataggttggaataccttgtgttctaaaaaggagcatggaggtttgggggttaggaagttgaaggagtttaatattgctttactaggtaaa 36709558  T
Q  114 tggtgttggcggatgctggtggatagaggtggtttgtggtatagagttttagttgccaagtatggcgaattaggtggcaggttggaggttgggggccgga 213  Q
    ||||||||| ||||| | || || ||||  || |||||||||   |||||||| |||   ||||||||| ||||||| ||||||||||| ||||||||||    
T  36709557 tggtgttggaggatgttagttgacagagaagggttgtggtatcatgttttagtcgcccgttatggcgaagtaggtgggaggttggaggtggggggccgga 36709458  T
Q  214 gtgtttcgtgttggtggagggaggt 238  Q
    ||||||| |  |||||| |||||||    
T  36709457 gtgtttctttgtggtggcgggaggt 36709433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 14 - 238
Target Start/End: Original strand, 21739916 - 21740140
Alignment:
Q  14 aattagttggataggatggaaaactgtttgttccaaaaaggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaa 113  Q
    ||||| ||||||||| ||||| ||| | |||||   |||||||| |||||| |||||||| ||    |||| ||||||||||  |||||| ||||| |||    
T  21739916 aattacttggataggttggaatactttgtgttcttcaaaggagtctggagggttgggggtaaggagattgagggagtttaattttgctttgttaggtaaa 21740015  T
Q  114 tggtgttggcggatgctggtggatagaggtggtttgtggtatagagttttagttgccaagtatggcgaattaggtggcaggttggaggttgggggccgga 213  Q
    ||||||||| ||||| |||| |||||||  ||||| |||||| | ||| |||| |||   ||||||||| ||||||| ||||||||||||||||||||||    
T  21740016 tggtgttggaggatgttggtagatagagtaggtttatggtattgtgttctagtcgcccgttatggcgaagtaggtgggaggttggaggttgggggccgga 21740115  T
Q  214 gtgtttcgtgttggtggagggaggt 238  Q
    ||  ||| | |||||||||||||||    
T  21740116 gttgttcttcttggtggagggaggt 21740140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 50 - 157
Target Start/End: Complemental strand, 31675642 - 31675535
Alignment:
Q  50 aaaggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaatggtgttggcggatgctggtggatagaggtggtttg 149  Q
    ||||||||||||||| || |||||||||||||||| |||||||||  ||||||| ||||| |||||||||||||| ||| |||||||||||||||||||     
T  31675642 aaaggagtatggagggttaggggtgagacagttgagggagtttaaccatgctttgttaggtaaatggtgttggcgaatgttggtggatagaggtggtttt 31675543  T
Q  150 tggtatag 157  Q
    ||||||||    
T  31675542 tggtatag 31675535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 51 - 157
Target Start/End: Original strand, 40513154 - 40513260
Alignment:
Q  51 aaggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaatggtgttggcggatgctggtggatagaggtggtttgt 150  Q
    ||||||||||| ||||||||||||||  ||||| |||| ||||||| |||||| ||||| |||||||||||||||||| ||||||||||||||||||| |    
T  40513154 aaggagtatgggggtttgggggtgaggaagttgcaggattttaatagtgctttgttaggtaaatggtgttggcggatgttggtggatagaggtggtttat 40513253  T
Q  151 ggtatag 157  Q
    |||||||    
T  40513254 ggtatag 40513260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 51 - 239
Target Start/End: Original strand, 43121104 - 43121285
Alignment:
Q  51 aaggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaatggtgttggcggatgctggtggatagaggtggtttgt 150  Q
    ||||||| ||||||||||||||||||| |||||||| |||||||| | ||||| ||||| |||||||||||| ||||||| || |||||  ||||||| |    
T  43121104 aaggagtttggaggtttgggggtgagatagttgaagaagtttaatcaggctttgttaggaaaatggtgttggaggatgcttgttgataggagtggttttt 43121203  T
Q  151 ggtatagagttttagttgccaagtatggcgaattaggtggcaggttggaggttgggggccggagtgtttcgtgttggtggagggaggtg 239  Q
    ||||| |||||||||| |||   ||||||||| |       |||| |||||||||||||||||||  ||| | ||||||||||||||||    
T  43121204 ggtatcgagttttagtcgcccgttatggcgaaat-------aggtaggaggttgggggccggagttgttcttcttggtggagggaggtg 43121285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 14 - 238
Target Start/End: Original strand, 15481151 - 15481374
Alignment:
Q  14 aattagttggataggatggaaaactgtttgttccaaaaaggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaa 113  Q
    ||||| ||||||||| ||||| ||  | ||||| ||||||||| |||||||||||||||| ||  |||||||||||||||||| |||||| ||||| |||    
T  15481151 aattacttggataggttggaataccttgtgttctaaaaaggagcatggaggtttgggggttaggaagttgaaggagtttaatattgctttattaggtaaa 15481250  T
Q  114 tggtgttggcggatgctggtggatagaggtggtttgtggtatagagttttagttgccaagtatggcgaattaggtggcaggttggaggttgggggccgga 213  Q
    ||||||||| ||||| | || || ||||  || |||||||||   ||| |||| |||   |||||| || ||||||| |||||||||| ||||||||| |    
T  15481251 tggtgttggaggatgttagttgacagagaagggttgtggtatcatgttctagtcgcccgttatggcaaagtaggtgggaggttggagg-tgggggccgaa 15481349  T
Q  214 gtgtttcgtgttggtggagggaggt 238  Q
    ||||||| |  |||||| |||||||    
T  15481350 gtgtttccttgtggtggcgggaggt 15481374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 42 - 238
Target Start/End: Complemental strand, 45684895 - 45684699
Alignment:
Q  42 tgttccaaaaaggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaatggtgttggcggatgctggtggatagag 141  Q
    ||||| |||||||||| ||||||||||||||| || |  |||||||||||||||| ||||||  |||| |||||||||||| ||||| | || |||||||    
T  45684895 tgttcaaaaaaggagtttggaggtttgggggttaggcgattgaaggagtttaatattgctttactaggtaaatggtgttggaggatgttagtcgatagag 45684796  T
Q  142 gtggtttgtggtatagagttttagttgccaagtatggcgaattaggtggcaggttggaggttgggggccggagtgtttcgtgttggtggagggaggt 238  Q
      ||  ||||||||   |||||||| ||    ||||||||| ||||||| ||||||||||| ||||||||||||||||| |  |||||| |||||||    
T  45684795 aagggctgtggtatcaggttttagtcgctcgttatggcgaagtaggtgggaggttggaggtggggggccggagtgtttctttgtggtggcgggaggt 45684699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 317 - 488
Target Start/End: Original strand, 2813208 - 2813379
Alignment:
Q  317 gttttggtttgataggtggttaggggatgttcctttttgtgtccgttttagtagactgttagagttaacagagaataagttcatgtctgtggcaaacttg 416  Q
    |||||||| |||||||||| ||||||| | |||| ||||||| || |||||  |  |||| |||||||||||||||||||  ||||| || ||  |||||    
T  2813208 gttttggtctgataggtggataggggaggctcctctttgtgtgcggtttaggcggttgtttgagttaacagagaataagtctatgtccgttgccgacttg 2813307  T
Q  417 ttctctgttgattcggagcagcggggggttatgtggaggtggagacgtcgtttgtggcagtgggaggaggag 488  Q
     |||||||||||||||||| | ||||||   ||||||||||||||||| | || ||||||||||||||||||    
T  2813308 ctctctgttgattcggagcggtggggggaggtgtggaggtggagacgtaggttatggcagtgggaggaggag 2813379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 317 - 488
Target Start/End: Complemental strand, 29309840 - 29309669
Alignment:
Q  317 gttttggtttgataggtggttaggggatgttcctttttgtgtccgttttagtagactgttagagttaacagagaataagttcatgtctgtggcaaacttg 416  Q
    |||||||| |||||||||| ||||||| | |||| ||||||| || |||||  |  |||| |||||||||||||||||||  ||||| |||||  |||||    
T  29309840 gttttggtctgataggtggataggggaggctcctctttgtgtgcggtttaggcggttgtttgagttaacagagaataagtctatgtccgtggccgacttg 29309741  T
Q  417 ttctctgttgattcggagcagcggggggttatgtggaggtggagacgtcgtttgtggcagtgggaggaggag 488  Q
     ||||||| |||||||||| | ||||||   ||||||||||||||||| | || ||||||||||||||||||    
T  29309740 ctctctgtcgattcggagcggtggggggaggtgtggaggtggagacgtaggttatggcagtgggaggaggag 29309669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 50 - 157
Target Start/End: Original strand, 31920780 - 31920887
Alignment:
Q  50 aaaggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaatggtgttggcggatgctggtggatagaggtggtttg 149  Q
    ||||||||||||||| || || ||||||||||||| |||||||||  ||||||| ||||| |||||||||||||| ||| |||||||||||||||||||     
T  31920780 aaaggagtatggagggttaggagtgagacagttgagggagtttaaccatgctttgttaggtaaatggtgttggcgaatgttggtggatagaggtggtttt 31920879  T
Q  150 tggtatag 157  Q
    ||||||||    
T  31920880 tggtatag 31920887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 51 - 239
Target Start/End: Complemental strand, 50544933 - 50544746
Alignment:
Q  51 aaggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaatggtgttggcggatgctggtggatagaggtggtttgt 150  Q
    ||||||| ||||||||| ||||||| |||||||||||| ||||||   ||||| ||||| || ||||||||| ||||||| || |||||  ||||||| |    
T  50544933 aaggagtctggaggtttaggggtgacacagttgaaggaatttaatttggctttgttaggaaagtggtgttggaggatgcttgttgataggagtggttttt 50544834  T
Q  151 ggtatagagttttagttgccaagtatggcgaattaggtggcaggttggaggttgggggccggagtgtttcgtgttggtggagggaggtg 239  Q
      ||| |||||||||| |||  || ||||||| ||||||| ||||||||||| ||||||||||||  ||| | ||| ||||||||||||    
T  50544833 attatcgagttttagtcgcc-cgtttggcgaagtaggtgggaggttggaggtcgggggccggagttgttcttcttgatggagggaggtg 50544746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 14 - 238
Target Start/End: Original strand, 42674832 - 42675055
Alignment:
Q  14 aattagttggataggatggaaaactgtttgttccaaaaaggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaa 113  Q
    ||||| ||||||||| ||| | ||| | ||||| ||||||||| |||||||||||| ||||||    |||||||||||||||| || |||  |||| |||    
T  42674832 aattacttggataggttgggatactttgtgttctaaaaaggagcatggaggtttggaggtgaggagattgaaggagtttaatattgttttactaggtaaa 42674931  T
Q  114 tggtgttggcggatgctggtggatagaggtggtttgtggtatagagttttagttgccaagtatggcgaattaggtggcaggttggaggttgggggccgga 213  Q
    ||||||||| ||||| | || |||||||  || |||||||||   |||||||| |||   ||||||||| ||| ||| |||||||||| |||||||||||    
T  42674932 tggtgttggaggatgttagttgatagagaagggttgtggtatcaggttttagtcgcccgttatggcgaagtagatgggaggttggagg-tgggggccgga 42675030  T
Q  214 gtgtttcgtgttggtggagggaggt 238  Q
    || |||| |  |||||| |||||||    
T  42675031 gtatttctttgtggtggcgggaggt 42675055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 317 - 488
Target Start/End: Original strand, 6176186 - 6176357
Alignment:
Q  317 gttttggtttgataggtggttaggggatgttcctttttgtgtccgttttagtagactgttagagttaacagagaataagttcatgtctgtggcaaacttg 416  Q
    |||||||| |||||||||| ||||||| | |||| ||||||| || |||||  |  |||| ||||||| |||||||||||  ||||| || ||  |||||    
T  6176186 gttttggtctgataggtggataggggaggctcctctttgtgtgcggtttagacggttgtttgagttaatagagaataagtctatgtccgtcgccgacttg 6176285  T
Q  417 ttctctgttgattcggagcagcggggggttatgtggaggtggagacgtcgtttgtggcagtgggaggaggag 488  Q
     |||||||||||||||||| | ||||||   ||||||||||||||||| | || | ||||||||||||||||    
T  6176286 ctctctgttgattcggagcggtggggggaggtgtggaggtggagacgtaggttatagcagtgggaggaggag 6176357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 51 - 198
Target Start/End: Complemental strand, 23819274 - 23819127
Alignment:
Q  51 aaggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaatggtgttggcggatgctggtggatagaggtggtttgt 150  Q
    ||||||| |||||||||||||| ||||||||||||||| |||||| | ||||| ||||| || ||||||||| ||||||| || |||||  ||||||| |    
T  23819274 aaggagtttggaggtttgggggcgagacagttgaaggaatttaatcaggctttgttaggaaagtggtgttggaggatgcttgttgataggagtggttttt 23819175  T
Q  151 ggtatagagttttagttgccaagtatggcgaattaggtggcaggttgg 198  Q
    ||||| ||||||  || |||   ||||||||| ||||||| |||||||    
T  23819174 ggtatcgagtttccgtcgcccgttatggcgaagtaggtgggaggttgg 23819127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 53 - 238
Target Start/End: Complemental strand, 47537976 - 47537791
Alignment:
Q  53 ggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaatggtgttggcggatgctggtggatagaggtggtttgtgg 152  Q
    ||||| |||||||||||||||||||| |||||| || ||||||   ||||| ||||| || || |||||| ||||||| || |||||  |||| || |||    
T  47537976 ggagtttggaggtttgggggtgagacggttgaaagaatttaatttggctttgttaggtaagtgttgttggaggatgctagttgataggagtggcttttgg 47537877  T
Q  153 tatagagttttagttgccaagtatggcgaattaggtggcaggttggaggttgggggccggagtgtttcgtgttggtggagggaggt 238  Q
    ||| |||| ||||| |||    |||||||| ||||||| |||||||||||| |||||| ||||  ||| | |||||||||||||||    
T  47537876 tatcgagtcttagtcgcccgtaatggcgaagtaggtggaaggttggaggttaggggccagagttgttcttcttggtggagggaggt 47537791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 53 - 238
Target Start/End: Complemental strand, 48192505 - 48192322
Alignment:
Q  53 ggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaatggtgttggcggatgctggtggatagaggtggtttgtgg 152  Q
    ||||| ||||||||||||| || | | |||||| || ||||||   ||||| |||||||| ||||||||| ||||||| || |||||  |||| || |||    
T  48192505 ggagtttggaggtttgggg-tgcgccggttgaaagaatttaatttggctttattagggaagtggtgttggaggatgctagttgataggagtggcttttgg 48192407  T
Q  153 tatagagttttagttgccaagtatggcgaattaggtggcaggttggaggttgggggccggagtgtttcgtgttggtggagggaggt 238  Q
    ||| |||||||||| | |  |||||||||| ||||||| |||||||||||||||||  ||||| |||| | |||||||||||||||    
T  48192406 tatcgagttttagtcgtcc-gtatggcgaagtaggtgggaggttggaggttgggggttggagtttttcttcttggtggagggaggt 48192322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 392 - 495
Target Start/End: Complemental strand, 9379454 - 9379351
Alignment:
Q  392 taagttcatgtctgtggcaaacttgttctctgttgattcggagcagcggggggttatgtggaggtggagacgtcgtttgtggcagtgggaggaggagatg 491  Q
    ||||| ||||| ||||||||||||||||| ||||||||| |||||| |||||| | ||||||||||||| ||  | || |||||||||||||||| ||||    
T  9379454 taagtccatgtatgtggcaaacttgttctatgttgattcagagcagtggggggatttgtggaggtggaggcgcaggttatggcagtgggaggaggggatg 9379355  T
Q  492 ttag 495  Q
    ||||    
T  9379354 ttag 9379351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 51 - 157
Target Start/End: Complemental strand, 34830103 - 34829997
Alignment:
Q  51 aaggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaatggtgttggcggatgctggtggatagaggtggtttgt 150  Q
    |||||||||||||| |||||||||||  ||||| | || ||||||| |||||| ||||| |||||||||||||||||| ||||||||| || ||| || |    
T  34830103 aaggagtatggagggttgggggtgaggaagttgcatgaatttaatagtgctttgttaggtaaatggtgttggcggatgttggtggatatagttgggttat 34830004  T
Q  151 ggtatag 157  Q
    |||||||    
T  34830003 ggtatag 34829997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 42 - 198
Target Start/End: Complemental strand, 8944055 - 8943901
Alignment:
Q  42 tgttccaaaaaggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaatggtgttggcggatgctggtggatagag 141  Q
    ||||| ||||||||||||||||| || |||||||||||||| ||||||||||||  |||| ||||||  |||||||||||| ||||||| ||  ||||||    
T  8944055 tgttcaaaaaaggagtatggagggtttggggtgagacagtttaaggagtttaattttgctatcttagataaatggtgttggaggatgctagttcatagag 8943956  T
Q  142 gtggtttgtggtatagagttttagttgccaagtatggcgaattaggtggcaggttgg 198  Q
    | || || |||   || ||| |||||||| | ||||||||| ||||| | |||||||    
T  8943955 gaggcttatgg--cagggttctagttgcccattatggcgaagtaggttggaggttgg 8943901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 14 - 238
Target Start/End: Original strand, 14863858 - 14864082
Alignment:
Q  14 aattagttggataggatggaaaactgtttgttccaaaaaggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaa 113  Q
    ||||| ||||||||| ||||| ||| | |||||    ||||||| |||||| |||||||| ||    |||| ||||||||||  ||| || ||||| |||    
T  14863858 aattacttggataggttggaatactttatgttcttctaaggagtctggagggttgggggttaggagattgagggagtttaattttgcattgttaggtaaa 14863957  T
Q  114 tggtgttggcggatgctggtggatagaggtggtttgtggtatagagttttagttgccaagtatggcgaattaggtggcaggttggaggttgggggccgga 213  Q
    ||||||||| ||||| |||| |||| ||  ||||| |||||||| ||| | || |||   ||||||||  | ||||| ||||||||||| ||||||||||    
T  14863958 tggtgttggaggatgttggtcgataaagtaggtttatggtatagtgttcttgtcgcctgttatggcgaggtgggtgggaggttggaggtggggggccgga 14864057  T
Q  214 gtgtttcgtgttggtggagggaggt 238  Q
    ||  ||| | |||||||||||||||    
T  14864058 gttgttcttcttggtggagggaggt 14864082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 50 - 156
Target Start/End: Complemental strand, 55367320 - 55367215
Alignment:
Q  50 aaaggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaatggtgttggcggatgctggtggatagaggtggtttg 149  Q
    |||||||||||| |||| |||||||||  |||||||||| ||||||  ||| || ||||| |||||||||||| ||||| | || ||||||||||| |||    
T  55367320 aaaggagtatgggggtt-gggggtgaggaagttgaaggaatttaatcttgcgttgttaggaaaatggtgttggaggatgttagttgatagaggtgggttg 55367222  T
Q  150 tggtata 156  Q
    |||||||    
T  55367221 tggtata 55367215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 48 - 216
Target Start/End: Original strand, 24926115 - 24926283
Alignment:
Q  48 aaaaaggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaatggtgttggcggatgctggtggatagaggtggtt 147  Q
    ||||||||| ||||||| ||| |||| ||  ||||||| |||||||||| ||| ||  |||  |||||||||||| ||||| | ||||||||||  ||||    
T  24926115 aaaaaggagcatggagggttgagggttaggaagttgaaagagtttaatattgccttactagaaaaatggtgttggaggatgttagtggatagagaaggtt 24926214  T
Q  148 tgtggtatagagttttagttgccaagtatggcgaattaggtggcaggttggaggttgggggccggagtg 216  Q
    |||||||| | |||||||| |||   |||| |||   | |||| ||||||||||||||  |||||||||    
T  24926215 tgtggtatcgtgttttagtcgcccgttatgacgaggcatgtgggaggttggaggttggtcgccggagtg 24926283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 36 - 96
Target Start/End: Complemental strand, 16664802 - 16664742
Alignment:
Q  36 actgtttgttccaaaaaggagtatggaggtttgggggtgagacagttgaaggagtttaata 96  Q
    ||||||||||  |||| |||| |||||||||||||||||| |||||||||||| |||||||    
T  16664802 actgtttgtttgaaaagggagaatggaggtttgggggtgaaacagttgaaggaatttaata 16664742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 86 - 141
Target Start/End: Complemental strand, 53941978 - 53941923
Alignment:
Q  86 ggagtttaataatgctttcttagggaaatggtgttggcggatgctggtggatagag 141  Q
    |||||||||| ||||||| ||||| |||||||||||| ||||| ||||||||||||    
T  53941978 ggagtttaattatgctttattaggaaaatggtgttggaggatgttggtggatagag 53941923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 195 - 239
Target Start/End: Complemental strand, 35537334 - 35537290
Alignment:
Q  195 ttggaggttgggggccggagtgtttcgtgttggtggagggaggtg 239  Q
    |||||||||||||||||||||| ||| | ||||||||||||||||    
T  35537334 ttggaggttgggggccggagtgattcttattggtggagggaggtg 35537290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 53 - 125
Target Start/End: Complemental strand, 48930434 - 48930362
Alignment:
Q  53 ggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaatggtgttggcgg 125  Q
    ||||| |||||||||||||||| |   ||||| ||||||||||| ||| || ||||| |||||||||||||||    
T  48930434 ggagtttggaggtttgggggtgcggaggttgagggagtttaatattgcattgttaggtaaatggtgttggcgg 48930362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 53 - 152
Target Start/End: Original strand, 12341687 - 12341786
Alignment:
Q  53 ggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaatggtgttggcggatgctggtggatagaggtggtttgtgg 152  Q
    |||||||||||| ||||| |||||   |||||  |||||||| | |||||| || |||||||||||||||||| || | || ||||| || |||||||||    
T  12341687 ggagtatggagggttgggtgtgaggaggttgagagagtttaacattgctttgttggggaaatggtgttggcggctgttagttgataggggaggtttgtgg 12341786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 314 - 349
Target Start/End: Complemental strand, 19875678 - 19875643
Alignment:
Q  314 tttgttttggtttgataggtggttaggggatgttcc 349  Q
    ||||||||||||||||||||||||||| ||||||||    
T  19875678 tttgttttggtttgataggtggttaggagatgttcc 19875643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 67 - 238
Target Start/End: Complemental strand, 46190186 - 46190015
Alignment:
Q  67 tgggggtgagacagttgaaggagtttaataatgctttcttagggaaatggtgttggcggatgctggtggatagaggtggtttgtggtatagagttttagt 166  Q
    |||||||||| ||||| | ||| ||||||  |||||| ||| | || || ||||||||| || ||||||||| ||| ||||||||||| || || || ||    
T  46190186 tgggggtgaggcagtttagggaatttaatcttgctttgttaagaaagtgatgttggcggttgttggtggataaaggaggtttgtggtacagggtattggt 46190087  T
Q  167 tgccaagtatggcgaattaggtggcaggttggaggttgggggccggagtgtttcgtgttggtggagggaggt 238  Q
     || | |||||| ||    | ||   ||||||||||||||||||||||||||||   ||| |||||||||||    
T  46190086 ggcgaggtatggtgaggaggctgagcggttggaggttgggggccggagtgtttctaattgatggagggaggt 46190015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 192 - 238
Target Start/End: Complemental strand, 8130520 - 8130474
Alignment:
Q  192 aggttggaggttgggggccggagtgtttcgtgttggtggagggaggt 238  Q
    ||||||||||||||||||||||||| ||| | |||||||| ||||||    
T  8130520 aggttggaggttgggggccggagtggttctttttggtggaaggaggt 8130474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 192 - 238
Target Start/End: Complemental strand, 19875812 - 19875766
Alignment:
Q  192 aggttggaggttgggggccggagtgtttcgtgttggtggagggaggt 238  Q
    |||||||||||||||||||||||||| || | |||||||| ||||||    
T  19875812 aggttggaggttgggggccggagtgtatcatcttggtggaaggaggt 19875766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 51 - 165
Target Start/End: Original strand, 46908100 - 46908214
Alignment:
Q  51 aaggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaatggtgttggcggatgctggtggatagaggtggtttgt 150  Q
    ||||||| |||||| ||||||||||| |  |||  ||||||||||  |||||| ||||| || |||| |||| ||||||| || || |   ||||||| |    
T  46908100 aaggagtttggagggttgggggtgaggcgtttgtgggagtttaattttgctttgttaggtaagtggtcttggaggatgcttgttgacatgagtggttttt 46908199  T
Q  151 ggtatagagttttag 165  Q
    |||||||||||||||    
T  46908200 ggtatagagttttag 46908214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 81 - 166
Target Start/End: Complemental strand, 10868283 - 10868198
Alignment:
Q  81 ttgaaggagtttaataatgctttcttagggaaatggtgttggcggatgctggtggatagaggtggtttgtggtatagagttttagt 166  Q
    |||| ||||||||||  |||||| ||||| |||||||||||| ||||| |||| |||||||  ||||| || ||||| ||| ||||    
T  10868283 ttgagggagtttaattttgctttgttaggtaaatggtgttggaggatgttggtagatagagtaggtttctgatatagtgttctagt 10868198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 194 - 238
Target Start/End: Original strand, 17039573 - 17039617
Alignment:
Q  194 gttggaggttgggggccggagtgtttcgtgttggtggagggaggt 238  Q
    |||||||||||| ||||||||||| || | |||||||||||||||    
T  17039573 gttggaggttggtggccggagtgtgtctttttggtggagggaggt 17039617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0418 (Bit Score: 168; Significance: 8e-90; HSPs: 2)
Name: scaffold0418
Description:

Target: scaffold0418; HSP #1
Raw Score: 168; E-Value: 8e-90
Query Start/End: Original strand, 14 - 265
Target Start/End: Complemental strand, 8351 - 8101
Alignment:
Q  14 aattagttggataggatggaaaactgtttgttccaaaaaggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaa 113  Q
    ||||| ||||||||| ||||||| ||||||||||| ||||||| ||||||||||||||||||||||||||||||| ||||||| |||||| ||||| |||    
T  8351 aattacttggataggctggaaaattgtttgttccacaaaggagaatggaggtttgggggtgagacagttgaaggaatttaatagtgctttgttaggtaaa 8252  T
Q  114 tggtgttggcggatgctggtggatagaggtggtttgtggtatagagttttagttgccaagtatggcgaattaggtggcaggttggaggttgggggccgga 213  Q
    ||||||||||||||| ||||||| |||||||||||||||||||| || |||||||| | ||||||||||||||||||||| |||||||||||||||||||    
T  8251 tggtgttggcggatgttggtggacagaggtggtttgtggtatagtgtcttagttgctaggtatggcgaattaggtggcagattggaggttgggggccgga 8152  T
Q  214 gtgtttcgtgttggtggagggaggtgagtcgtcttaggggtagtgatggtga 265  Q
    ||||||||||||||||| |||||||||||||| |||||| ||||| ||||||    
T  8151 gtgtttcgtgttggtgg-gggaggtgagtcgtattagggatagtggtggtga 8101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0418; HSP #2
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 336 - 498
Target Start/End: Complemental strand, 8088 - 7926
Alignment:
Q  336 ttaggggatgttcctttttgtgtccgttttagtagactgttagagttaacagagaataagttcatgtctgtggcaaacttgttctctgttgattcggagc 435  Q
    |||||||||||||| || |||||||||||| ||||| |||| ||||||| |||||||||| |||||||| ||||| |||||||||||||||||| |||||    
T  8088 ttaggggatgttccgttctgtgtccgttttcgtagattgtttgagttaatagagaataagctcatgtctatggcagacttgttctctgttgatttggagc 7989  T
Q  436 agcggggggttatgtggaggtggagacgtcgtttgtggcagtgggaggaggagatgttagtgg 498  Q
    ||| |||| || | ||||||||||| ||| | |||||||||||||||||||||||||||||||    
T  7988 agcaggggtttttttggaggtggaggcgtagattgtggcagtgggaggaggagatgttagtgg 7926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 155; Significance: 5e-82; HSPs: 32)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 155; E-Value: 5e-82
Query Start/End: Original strand, 241 - 500
Target Start/End: Complemental strand, 21528685 - 21528414
Alignment:
Q  241 gtcgtcttaggggtagtgatggtgatggagagggcggctggtttgttgatcgtgtggctagcagggttggagat------------ttgttttggtttga 328  Q
    |||||||||||||||||||||||||||||||| |||| ||||||||||||| ||||||||| ||||||||||||            ||||||||||| ||    
T  21528685 gtcgtcttaggggtagtgatggtgatggagagagcggatggtttgttgatcatgtggctaggagggttggagatgaagctgatacgttgttttggttgga 21528586  T
Q  329 taggtggttaggggatgttcctttttgtgtccgttttagtagactgttagagttaacagagaataagttcatgtctgtggcaaacttgttctctgttgat 428  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||||||||||||||||||||||||| | | |||||||||||||||||    
T  21528585 taggtggttaggggatgttcctttttgtgtccgttttcgtaggctgtttgagttaacagagaataagttcatgtctgttggagacttgttctctgttgat 21528486  T
Q  429 tcggagcagcggggggttatgtggaggtggagacgtcgtttgtggcagtgggaggaggagatgttagtggtg 500  Q
    ||||||||  |||||||||||||||||||||||||| | || ||| ||||||||||||| ||||||| ||||    
T  21528485 tcggagcaatggggggttatgtggaggtggagacgtaggttatggtagtgggaggaggacatgttagcggtg 21528414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 34 - 252
Target Start/End: Original strand, 32352723 - 32352941
Alignment:
Q  34 aaactgtttgttccaaaaaggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaatggtgttggcggatgctggt 133  Q
    ||||||||||||  |||||||||||||| ||||||||||||||  | |||||||||||||||   ||||| ||||| |||||||||||||||||| ||||    
T  32352723 aaactgtttgtttaaaaaaggagtatggcggtttgggggtgaggaaattgaaggagtttaatttagctttgttaggaaaatggtgttggcggatgttggt 32352822  T
Q  134 ggatagaggtggtttgtggtatagagttttagttgccaagtatggcgaattaggtggcaggttggaggttgggggccggagtgtttcgtgttggtggagg 233  Q
    |||||||||||||||||||||||| |||||||| || | |||||||||||||||||||||||||||||||||||||||||||||||| || ||||||  |    
T  32352823 ggatagaggtggtttgtggtatagggttttagtcgctaggtatggcgaattaggtggcaggttggaggttgggggccggagtgtttcatgctggtggtcg 32352922  T
Q  234 gaggtgagtcgtcttaggg 252  Q
    |||||||| ||||||||||    
T  32352923 gaggtgaggcgtcttaggg 32352941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 34 - 252
Target Start/End: Original strand, 48072844 - 48073062
Alignment:
Q  34 aaactgtttgttccaaaaaggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaatggtgttggcggatgctggt 133  Q
    ||||||||||||  |||||||||| ||| ||||||| |||| |  | |||||||||||||||   ||||| ||||| |||||||||||||||||| ||||    
T  48072844 aaactgtttgtttaaaaaaggagtgtggcggtttggaggtgcggaaattgaaggagtttaatttagctttgttaggaaaatggtgttggcggatgttggt 48072943  T
Q  134 ggatagaggtggtttgtggtatagagttttagttgccaagtatggcgaattaggtggcaggttggaggttgggggccggagtgtttcgtgttggtggagg 233  Q
    |||||||||||||||||||||| | |||||||| | || |||||||||||||||||||||||||||||||||||||||||||||||| || ||||||  |    
T  48072944 ggatagaggtggtttgtggtatcgggttttagtcgacaggtatggcgaattaggtggcaggttggaggttgggggccggagtgtttcttgctggtggtcg 48073043  T
Q  234 gaggtgagtcgtcttaggg 252  Q
    |||||||| ||||||||||    
T  48073044 gaggtgaggcgtcttaggg 48073062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 315 - 495
Target Start/End: Complemental strand, 36306218 - 36306038
Alignment:
Q  315 ttgttttggtttgataggtggttaggggatgttcctttttgtgtccgttttagtagactgttagagttaacagagaataagttcatgtctgtggcaaact 414  Q
    |||||||||| ||||||||||||||||||||||||||| ||||||| |||| |||||||||| |||||||| ||||||||| |||||| ||||||| |||    
T  36306218 ttgttttggtatgataggtggttaggggatgttcctttctgtgtcctttttcgtagactgtttgagttaacggagaataagctcatgtatgtggcagact 36306119  T
Q  415 tgttctctgttgattcggagcagcggggggttatgtggaggtggagacgtcgtttgtggcagtgggaggaggagatgttag 495  Q
    ||||||||||||||| |||||||| ||||||| | ||||||||||| ||| | |||||||||||| |||||||||||||||    
T  36306118 tgttctctgttgatttggagcagcagggggttgtttggaggtggaggcgtagattgtggcagtggaaggaggagatgttag 36306038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 51 - 239
Target Start/End: Original strand, 28097396 - 28097583
Alignment:
Q  51 aaggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaatggtgttggcggatgctggtggatagaggtggtttgt 150  Q
    ||||||| ||||||||||||||||||||||||||||||||||||| | ||||| ||||| || ||||||||| | ||||| || |||||  ||| |||||    
T  28097396 aaggagtttggaggtttgggggtgagacagttgaaggagtttaatcaggctttgttaggaaagtggtgttggagtatgcttgttgatagtagtgatttgt 28097495  T
Q  151 ggtatagagttttagttgccaagtatggcgaattaggtggcaggttggaggttgggggccggagtgtttcgtgttggtggagggaggtg 239  Q
    ||||| |||||||||| |||   ||||||||| ||||||| |||||||||||| |||||||||||  ||| | ||||||||||||||||    
T  28097496 ggtatcgagttttagtcgcccgttatggcgaagtaggtgggaggttggaggtt-ggggccggagttattcttcttggtggagggaggtg 28097583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 113 - 486
Target Start/End: Complemental strand, 37531205 - 37530829
Alignment:
Q  113 atggtgttggcggatgctggtggatagaggtggtttgtggtatagagttttagttgccaagtatggcgaattaggtggcaggttggaggttgggggccgg 212  Q
    |||| ||||||||||| |||| || |||||||| ||||||||||| |||||||||| || ||||||||| ||||||||||||||||       |||||||    
T  37531205 atggcgttggcggatgttggtagacagaggtgggttgtggtatagggttttagttgtcaggtatggcgagttaggtggcaggttgg-------gggccgg 37531113  T
Q  213 agtgtttcgt-gttggtggagggaggtgagtcgtcttaggggtagtgatggtgatggagagggcggctggtttgttgatcgtgtggctagcagggttgga 311  Q
    || ||||| | ||||||||  ||||||||||||||||||||  || ||||| ||||| |   ||||||||||||  ||||  |||   || || ||||      
T  37531112 agagtttcattgttggtggtcggaggtgagtcgtcttagggtgagggatggagatggtggtagcggctggtttgaggatcaggtg---aggagagttgat 37531016  T
Q  312 gat------------ttgttttggtttgataggtggttaggggatgttcctttttgtgtccgttttagtagactgttagagttaacagagaataagttca 399  Q
    |||            | |||||||| |||||||||||||||||| |||||| |||||||  |  ||||| |  |||| ||||||||||||||||||   |    
T  37531015 gatggggctgatacttcgttttggtctgataggtggttaggggaggttcctctttgtgtgagacttagtcggttgtttgagttaacagagaataagacta 37530916  T
Q  400 tgtctgtggcaaacttgttctctgttgattcggagcagcggggggttatgtggaggtggagacgtcgtttgtggcagtgggaggagg 486  Q
    ||| ||||||| ||||| |||||||||||||||||| | ||||||   ||||||||||||||||| | || ||||||||||||||||    
T  37530915 tgtatgtggcagacttgctctctgttgattcggagcggtggggggaagtgtggaggtggagacgtaggttatggcagtgggaggagg 37530829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 51 - 238
Target Start/End: Original strand, 25504424 - 25504611
Alignment:
Q  51 aaggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaatggtgttggcggatgctggtggatagaggtggtttgt 150  Q
    ||||||| |||||| || ||||| |||||||||| ||||||||||| ||| ||  ||||||||||||||||| ||||| | |||||||| |||||||| |    
T  25504424 aaggagtttggagggttaggggttagacagttgatggagtttaatattgccttactagggaaatggtgttggaggatgttagtggataggggtggttttt 25504523  T
Q  151 ggtatagagttttagttgccaagtatggcgaattaggtggcaggttggaggttgggggccggagtgtttcgtgttggtggagggaggt 238  Q
    |||||||||||||||| |||   ||||||||  |  |||| ||||||||||||||||||| ||||  ||| | ||||||| |||||||    
T  25504524 ggtatagagttttagtcgcccgttatggcgaggtgtgtgggaggttggaggttgggggccagagttgttcttcttggtggcgggaggt 25504611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 56 - 157
Target Start/End: Original strand, 13867268 - 13867369
Alignment:
Q  56 gtatggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaatggtgttggcggatgctggtggatagaggtggtttgtggtat 155  Q
    |||||||||||||||||||||  ||||| |||| ||||||| |||||| ||||| |||||||||||||||||| ||||||||||||||||||| ||||||    
T  13867268 gtatggaggtttgggggtgaggaagttgcaggaatttaatagtgctttgttaggtaaatggtgttggcggatgttggtggatagaggtggtttatggtat 13867367  T
Q  156 ag 157  Q
    ||    
T  13867368 ag 13867369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 51 - 156
Target Start/End: Complemental strand, 45795985 - 45795880
Alignment:
Q  51 aaggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaatggtgttggcggatgctggtggatagaggtggtttgt 150  Q
    |||||||||||||| |||||||||||  ||||| |||| ||||||| |||||| ||||| |||||||||||||||||| ||||||||| ||||||||| |    
T  45795985 aaggagtatggagggttgggggtgaggaagttgcaggaatttaatagtgctttgttaggtaaatggtgttggcggatgttggtggataaaggtggtttat 45795886  T
Q  151 ggtata 156  Q
    ||||||    
T  45795885 ggtata 45795880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 317 - 488
Target Start/End: Original strand, 32353005 - 32353176
Alignment:
Q  317 gttttggtttgataggtggttaggggatgttcctttttgtgtccgttttagtagactgttagagttaacagagaataagttcatgtctgtggcaaacttg 416  Q
    |||||||| ||||| |||| ||||||| | |||| ||||||| || |||||  |  |||| |||||||||||||||||||  ||||| |||||  |||||    
T  32353005 gttttggtctgatatgtggataggggaggctcctctttgtgtgcgatttaggcggttgtttgagttaacagagaataagtctatgtccgtggccgacttg 32353104  T
Q  417 ttctctgttgattcggagcagcggggggttatgtggaggtggagacgtcgtttgtggcagtgggaggaggag 488  Q
     |||||||||||||||||| | ||||||   ||||||||||||||||| | || ||||||||| ||||||||    
T  32353105 ctctctgttgattcggagcggtggggggaggtgtggaggtggagacgtaggttatggcagtggaaggaggag 32353176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 317 - 488
Target Start/End: Original strand, 48073139 - 48073310
Alignment:
Q  317 gttttggtttgataggtggttaggggatgttcctttttgtgtccgttttagtagactgttagagttaacagagaataagttcatgtctgtggcaaacttg 416  Q
    |||||||| |||||||||| ||||||| | |||| ||||||| || |||||  |  |||| |||||||||||||||||||  ||||| || ||  |||||    
T  48073139 gttttggtctgataggtggataggggaggctcctctttgtgtgcggtttaggcggttgtttgagttaacagagaataagtctatgtccgttgccgacttg 48073238  T
Q  417 ttctctgttgattcggagcagcggggggttatgtggaggtggagacgtcgtttgtggcagtgggaggaggag 488  Q
     |||||||||||||||||| | ||||||   ||||||||||||||||| | || ||| ||||||||||||||    
T  48073239 ctctctgttgattcggagcggtggggggaggtgtggaggtggagacgtaggttatgggagtgggaggaggag 48073310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 51 - 197
Target Start/End: Original strand, 7396152 - 7396298
Alignment:
Q  51 aaggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaatggtgttggcggatgctggtggatagaggtggtttgt 150  Q
    |||||||||||||| ||| |||| |||||||||| |||||||||| ||||||| ||||| |  ||||||||| ||||| |||| ||||  |||||||| |    
T  7396152 aaggagtatggagggttgagggttagacagttgagggagtttaattatgcttttttaggcatgtggtgttggaggatgttggttgatatgggtggttttt 7396251  T
Q  151 ggtatagagttttagttgccaagtatggcgaattaggtggcaggttg 197  Q
    | |||||||||||||| |||   ||||||||| ||||||| ||||||    
T  7396252 gatatagagttttagtcgcccgctatggcgaagtaggtgggaggttg 7396298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 53 - 239
Target Start/End: Complemental strand, 26721341 - 26721155
Alignment:
Q  53 ggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaatggtgttggcggatgctggtggatagaggtggtttgtgg 152  Q
    ||||| ||| ||||||||||||||||||||||  ||||| |||   ||||| ||||  || ||||||||| ||||||| || |||||  ||| ||| |||    
T  26721341 ggagtttggtggtttgggggtgagacagttgagagagttcaatttggctttgttagaaaagtggtgttggaggatgctagtagataggagtgatttttgg 26721242  T
Q  153 tatagagttttagttgccaagtatggcgaattaggtggcaggttggaggttgggggccggagtgtttcgtgttggtggagggaggtg 239  Q
    ||| |||| ||||| | |   ||||||||| ||||||| |||||||||||| |||||||||||  ||||| ||||||||||||||||    
T  26721241 tatcgagtcttagtcgtccgttatggcgaagtaggtgggaggttggaggttaggggccggagttgttcgtcttggtggagggaggtg 26721155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 50 - 239
Target Start/End: Complemental strand, 39430988 - 39430799
Alignment:
Q  50 aaaggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaatggtgttggcggatgctggtggatagaggtggtttg 149  Q
    |||||||| |||||| || ||||| ||   ||||| ||||||||||  |||||| ||||| || ||||||||| ||||| |||| |||||||  || |||    
T  39430988 aaaggagtctggagggttaggggttaggaggttgagggagtttaattgtgctttgttaggtaagtggtgttggaggatgttggtagatagagtagggttg 39430889  T
Q  150 tggtatagagttttagttgccaagtatggcgaattaggtggcaggttggaggttgggggccggagtgtttcgtgttggtggagggaggtg 239  Q
    |||||||| ||| |||| |||   ||||||||  | ||||| ||||||||||||||||||||||||  ||| | ||||||||||||||||    
T  39430888 tggtatagtgttctagtcgcccgttatggcgaggttggtgggaggttggaggttgggggccggagttgttcttattggtggagggaggtg 39430799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 69 - 220
Target Start/End: Complemental strand, 38070524 - 38070373
Alignment:
Q  69 ggggtgagacagttgaaggagtttaataatgctttcttagggaaatggtgttggcggatgctggtggatagaggtggtttgtggtatagagttttagttg 168  Q
    ||||||||||||||||| || ||||||| || ||| ||| | ||||||||||||||| || ||||||||||||| || ||||||||||||||||| || |    
T  38070524 ggggtgagacagttgaatgaatttaatattgttttattaagaaaatggtgttggcggttgttggtggatagaggagggttgtggtatagagttttggtgg 38070425  T
Q  169 ccaagtatggcgaattaggtggcaggttggaggttgggggccggagtgtttc 220  Q
    | | |||||| ||    | |||  |||||||||||||||| |||||||||||    
T  38070424 caaggtatggtgaggaggctgggcggttggaggttgggggtcggagtgtttc 38070373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 14 - 239
Target Start/End: Original strand, 49264357 - 49264582
Alignment:
Q  14 aattagttggataggatggaaaactgtttgttccaaaaaggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaa 113  Q
    ||||| ||||||||| ||||| ||| | |||||   |||||||| |||||| |||||||| ||   ||||| |||||||||   || ||| ||||| |||    
T  49264357 aattacttggataggttggaatactttgtgttctccaaaggagtctggagggttgggggttaggaggttgagggagtttaactttgttttgttaggtaaa 49264456  T
Q  114 tggtgttggcggatgctggtggatagaggtggtttgtggtatagagttttagttgccaagtatggcgaattaggtggcaggttggaggttgggggccgga 213  Q
    |||||||||  |||| |||| |||||||  || ||||||| ||| ||| |||| |||   ||||||||  | || || ||||||||||||||||||||||    
T  49264457 tggtgttggaagatgttggtagatagagtagggttgtggtgtagtgttatagtcgcccgttatggcgaggttggagggaggttggaggttgggggccgga 49264556  T
Q  214 gtgtttcgtgttggtggagggaggtg 239  Q
    ||  ||| | ||||||||||||||||    
T  49264557 gttgttcttattggtggagggaggtg 49264582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 49 - 157
Target Start/End: Original strand, 3544529 - 3544637
Alignment:
Q  49 aaaaggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaatggtgttggcggatgctggtggatagaggtggttt 148  Q
    |||||||||||||||| ||||| |||||| || ||| ||||||||||  || ||| ||||| |||||||||||||| ||| |||| ||||||| ||||||    
T  3544529 aaaaggagtatggagggttgggagtgagatagctgagggagtttaattgtgttttgttaggtaaatggtgttggcgaatgttggtagatagagatggttt 3544628  T
Q  149 gtggtatag 157  Q
     ||||||||    
T  3544629 ttggtatag 3544637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 431 - 495
Target Start/End: Original strand, 48265540 - 48265604
Alignment:
Q  431 ggagcagcggggggttatgtggaggtggagacgtcgtttgtggcagtgggaggaggagatgttag 495  Q
    ||||| |||||||||||||||||||||||||||| | ||||||||||||||||||||| ||||||    
T  48265540 ggagcggcggggggttatgtggaggtggagacgtaggttgtggcagtgggaggaggagttgttag 48265604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 49 - 157
Target Start/End: Original strand, 1248014 - 1248122
Alignment:
Q  49 aaaaggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaatggtgttggcggatgctggtggatagaggtggttt 148  Q
    ||||||||||||| || || |||||||| ||||| | ||||||||||| |||||| ||||| |||| ||||||| | ||  ||||||||| |||||||||    
T  1248014 aaaaggagtatggggggttaggggtgaggcagttaagggagtttaatagtgctttgttaggtaaatagtgttggtgtatattggtggataaaggtggttt 1248113  T
Q  149 gtggtatag 157  Q
     ||||||||    
T  1248114 ttggtatag 1248122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 49 - 232
Target Start/End: Original strand, 40562986 - 40563169
Alignment:
Q  49 aaaaggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaatggtgttggcggatgctggtggatagaggtggttt 148  Q
    |||||||| ||||||| || ||||||||  |||||||||| || |||| ||| || ||||| || | ||||||| ||||| ||||||||||||  || ||    
T  40562986 aaaaggaggatggagggttaggggtgaggtagttgaaggaattcaatattgccttgttaggcaagttgtgttggaggatgttggtggatagagacgggtt 40563085  T
Q  149 gtggtatagagttttagttgccaagtatggcgaattagg-tggcaggttggaggttgggggccggagtgtttcgtgttggtggag 232  Q
    ||||||||||||||| || || |  ||||| | || |||  |  |||||||||||||||||||||| |||||| | |||||||||    
T  40563086 gtggtatagagttttggtggcgagatatggag-atgaggcagagaggttggaggttgggggccggactgtttcatcttggtggag 40563169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 14 - 239
Target Start/End: Complemental strand, 20796404 - 20796190
Alignment:
Q  14 aattagttggataggatggaaaactgtttgttccaaaaaggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaa 113  Q
    ||||| ||||||||| ||||| ||| | |||||   |||||||| |||||| |||||||| ||   ||||| ||||||||||  |||||| ||||| |||    
T  20796404 aattacttggataggttggaatactttgtgttctccaaaggagtctggaggattgggggttaggaggttgagggagtttaattttgctttgttaggtaaa 20796305  T
Q  114 tggtgttggcggatgctggtggatagaggtggtttgtggtatagagttttagttgccaagtatggcgaattaggtggcaggttggaggttgggggccgga 213  Q
    ||||||||| ||||| ||||  ||||||  || ||||||||||  ||| |||| |||   |||||||           ||||||||||||||||||||||    
T  20796304 tggtgttggaggatgttggtaaatagagtagggttgtggtataatgttctagtcgcccgttatggcg-----------aggttggaggttgggggccgga 20796216  T
Q  214 gtgtttcgtgttggtggagggaggtg 239  Q
    ||  ||| | ||||||||||||||||    
T  20796215 gttgttcttattggtggagggaggtg 20796190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 173 - 244
Target Start/End: Complemental strand, 29140035 - 29139964
Alignment:
Q  173 gtatggcgaattaggtggcaggttggaggttgggggccggagtgtttcgtgttggtggagggaggtgagtcg 244  Q
    ||||| ||||||||||||||  ||||||| ||||||||||||||||||  |||||||| ||||| |||||||    
T  29140035 gtatgacgaattaggtggcaaattggaggatgggggccggagtgtttcaagttggtggcgggagttgagtcg 29139964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 64 - 206
Target Start/End: Original strand, 10710640 - 10710782
Alignment:
Q  64 gtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaatggtgttggcggatgctggtggatagaggtggtttgtggtatagagtttt 163  Q
    |||||| |||||||| |||||| || ||||||   || || ||||| |  ||||||||| ||||||| || |||||  ||||||| |||||| |||| ||    
T  10710640 gtttggaggtgagacggttgaaagaatttaatttagccttattaggaatgtggtgttggaggatgctagttgataggagtggtttttggtatcgagtctt 10710739  T
Q  164 agttgccaagtatggcgaattaggtggcaggttggaggttggg 206  Q
    ||| |||   ||||||||| ||||||| |||||||||||||||    
T  10710740 agtcgcccgttatggcgaagtaggtgggaggttggaggttggg 10710782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 51 - 220
Target Start/End: Complemental strand, 5809291 - 5809122
Alignment:
Q  51 aaggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaatggtgttggcggatgctggtggatagaggtggtttgt 150  Q
    ||||||||| || | |||||||||||  ||||| |||| |||||||  ||||| ||||| | |||||||||||||||| ||||||| | ||||||  | |    
T  5809291 aaggagtatagacggttgggggtgaggaagttgcaggaatttaatagcgctttgttaggtacatggtgttggcggatgttggtggacaaaggtgggctct 5809192  T
Q  151 ggtatagagttttagttgccaagtatggcgaattaggtggcaggttggaggttgggggccggagtgtttc 220  Q
    ||||||| ||| | || ||   |||||| |     | ||| |||||||||||||||||||||||||||||    
T  5809191 ggtatagggttcttgtagcgcggtatggtgtgaaggttgggaggttggaggttgggggccggagtgtttc 5809122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 66 - 155
Target Start/End: Original strand, 19014429 - 19014518
Alignment:
Q  66 ttgggggtgagacagttgaaggagtttaataatgctttcttagggaaatggtgttggcggatgctggtggatagaggtggtttgtggtat 155  Q
    |||||||| |||||||||| ||||||||||   |||||  |||| |||||| ||||||||||| ||||||| |||||||| || ||||||    
T  19014429 ttgggggttagacagttgagggagtttaatttagctttgctaggtaaatggagttggcggatgttggtggacagaggtgggttttggtat 19014518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 67 - 141
Target Start/End: Complemental strand, 20987849 - 20987775
Alignment:
Q  67 tgggggtgagacagttgaaggagtttaataatgctttcttagggaaatggtgttggcggatgctggtggatagag 141  Q
    ||||||| || ||||||| ||| ||||||| ||| || |||||||||||||| ||| ||||| ||||||||||||    
T  20987849 tgggggttaggcagttgagggaatttaatactgcgttgttagggaaatggtgctggaggatgttggtggatagag 20987775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 49 - 156
Target Start/End: Original strand, 27393377 - 27393484
Alignment:
Q  49 aaaaggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaatggtgttggcggatgctggtggatagaggtggttt 148  Q
    |||||||| || | ||||||||||||||  |||||  ||||||||||  ||| || ||||| || ||||||||| || || |||| |||||||| |||||    
T  27393377 aaaaggagcattgtggtttgggggtgaggaagttgcgggagtttaatcttgcattgttaggaaagtggtgttggaggttgttggttgatagaggaggttt 27393476  T
Q  149 gtggtata 156  Q
     |||||||    
T  27393477 atggtata 27393484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 192 - 235
Target Start/End: Complemental strand, 28358459 - 28358416
Alignment:
Q  192 aggttggaggttgggggccggagtgtttcgtgttggtggaggga 235  Q
    |||||||||||||||||||||||||| || | ||||||||||||    
T  28358459 aggttggaggttgggggccggagtgtctcatcttggtggaggga 28358416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 50 - 141
Target Start/End: Complemental strand, 52692182 - 52692091
Alignment:
Q  50 aaaggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaatggtgttggcggatgctggtggatagag 141  Q
    |||||||| |||||| || || ||||| || || | ||| ||||||  |||||| ||||| |||||||||||| ||||| ||||||||||||    
T  52692182 aaaggagtttggaggattaggagtgaggcaattaagggaatttaattgtgctttattaggaaaatggtgttggaggatgttggtggatagag 52692091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 86 - 139
Target Start/End: Original strand, 31068729 - 31068782
Alignment:
Q  86 ggagtttaataatgctttcttagggaaatggtgttggcggatgctggtggatag 139  Q
    ||||||||||  |||||| |||||||| |||||||||||| || ||||||||||    
T  31068729 ggagtttaattttgctttattagggaagtggtgttggcggttgttggtggatag 31068782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 192 - 236
Target Start/End: Original strand, 19014555 - 19014598
Alignment:
Q  192 aggttggaggttgggggccggagtgtttcgtgttggtggagggag 236  Q
    |||||||||||||||| |||||||||||| | |||||||||||||    
T  19014555 aggttggaggttgggg-ccggagtgtttcttcttggtggagggag 19014598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 316 - 352
Target Start/End: Complemental strand, 28358323 - 28358287
Alignment:
Q  316 tgttttggtttgataggtggttaggggatgttccttt 352  Q
    ||||||||||||||||||||||| | |||||||||||    
T  28358323 tgttttggtttgataggtggttacgagatgttccttt 28358287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 127; Significance: 2e-65; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 34 - 252
Target Start/End: Original strand, 23346880 - 23347098
Alignment:
Q  34 aaactgtttgttccaaaaaggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaatggtgttggcggatgctggt 133  Q
    ||||| ||||||  |||||||||||| | |||||||||||| |  | |||||||||||||||   ||||| ||||| |||||||||||||||||||||||    
T  23346880 aaactatttgtttaaaaaaggagtatcgcggtttgggggtgcggaaattgaaggagtttaatttagctttgttaggaaaatggtgttggcggatgctggt 23346979  T
Q  134 ggatagaggtggtttgtggtatagagttttagttgccaagtatggcgaattaggtggcaggttggaggttgggggccggagtgtttcgtgttggtggagg 233  Q
    |||||||||||||||||||||||| |||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| || ||||||  |    
T  23346980 ggatagaggtggtttgtggtatagggttttagtcgccaggtatggcgaattaggtggcaggttggaggttgggggccggagtgtttcttgctggtggtcg 23347079  T
Q  234 gaggtgagtcgtcttaggg 252  Q
    |||||||| || |||||||    
T  23347080 gaggtgaggcgacttaggg 23347098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 34 - 252
Target Start/End: Complemental strand, 15674556 - 15674338
Alignment:
Q  34 aaactgtttgttccaaaaaggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaatggtgttggcggatgctggt 133  Q
    ||||||||||||  |||||||||||||| |||||||||||| |  | |||||||||||||||   ||||| ||||| |||||||||||||||||| ||||    
T  15674556 aaactgtttgtttaaaaaaggagtatggcggtttgggggtgcggaaattgaaggagtttaatttagctttgttaggaaaatggtgttggcggatgttggt 15674457  T
Q  134 ggatagaggtggtttgtggtatagagttttagttgccaagtatggcgaattaggtggcaggttggaggttgggggccggagtgtttcgtgttggtggagg 233  Q
    |||  ||| ||||||||||||||| |||||||| ||||  ||||| ||||||||||||||||||||||||||||||||||| |||||  | ||||||  |    
T  15674456 ggaccgagatggtttgtggtatagggttttagtcgccagatatggtgaattaggtggcaggttggaggttgggggccggagagtttctagctggtggtcg 15674357  T
Q  234 gaggtgagtcgtcttaggg 252  Q
    |||||||| || |||||||    
T  15674356 gaggtgaggcgacttaggg 15674338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 34 - 256
Target Start/End: Complemental strand, 26206068 - 26205853
Alignment:
Q  34 aaactgtttgttccaaaaaggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaatggtgttggcggatgctggt 133  Q
    ||||||||||||  |||||||||| ||| ||||||||||||||    ||||||||||||||||   | || ||| ||||||||||||||||| |  ||||    
T  26206068 aaactgtttgtttaaaaaaggagtgtggcggtttgggggtgaggagattgaaggagtttaatataacattgttaaggaaatggtgttggcggttattggt 26205969  T
Q  134 ggatagaggtggtttgtggtatagagttttagttgccaagtatggcgaattaggtggcaggttggaggttgggggccggagtgtttcgtgttggtggagg 233  Q
     ||||||||||||||||||||||  |||||||| ||||  |||||||||||||||||||||       ||||||| ||||| ||||| |||||||||  |    
T  26205968 tgatagaggtggtttgtggtatacggttttagtcgccagatatggcgaattaggtggcagg-------ttgggggacggagagtttcttgttggtggtcg 26205876  T
Q  234 gaggtgagtcgtcttaggggtag 256  Q
    |||||||||||||||||||||||    
T  26205875 gaggtgagtcgtcttaggggtag 26205853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 49 - 239
Target Start/End: Original strand, 502960 - 503150
Alignment:
Q  49 aaaaggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaatggtgttggcggatgctggtggatagaggtggttt 148  Q
    ||||||||| |||||| || ||||| |||||||||||||||||||||| ||| ||  ||||||||||||||||| ||||| | |||||||| ||||||||    
T  502960 aaaaggagtttggagggttaggggttagacagttgaaggagtttaatattgccttactagggaaatggtgttggaggatgttagtggataggggtggttt 503059  T
Q  149 gtggtatagagttttagttgccaagtatggcgaattaggtggcaggttggaggttgggggccggagtgtttcgtgttggtggagggaggtg 239  Q
     || |||||||||||||| |||   ||||||||  |  |||| |||||||||| |||||||||||||  ||| | ||||||| ||||||||    
T  503060 ttgatatagagttttagtcgcccgttatggcgaggtgtgtgggaggttggaggatgggggccggagttgttcttcttggtggcgggaggtg 503150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 53 - 238
Target Start/End: Original strand, 11060294 - 11060479
Alignment:
Q  53 ggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaatggtgttggcggatgctggtggatagaggtggtttgtgg 152  Q
    ||||| |||||||||||||||||||| |||||| || ||||||   | ||| ||||| || ||||||||| ||||||| || |||||  |||| || |||    
T  11060294 ggagtttggaggtttgggggtgagacggttgaaagaatttaatgtggttttgttaggtaagtggtgttggaggatgctagttgataggagtggcttttgg 11060393  T
Q  153 tatagagttttagttgccaagtatggcgaattaggtggcaggttggaggttgggggccggagtgtttcgtgttggtggagggaggt 238  Q
    ||| |||| |||||||||   ||||||||||||||||| ||||||||||||||||||||||||  ||| | |||||||||||||||    
T  11060394 tatcgagtcttagttgcccgttatggcgaattaggtgggaggttggaggttgggggccggagttgttcttcttggtggagggaggt 11060479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 20 - 239
Target Start/End: Complemental strand, 33640658 - 33640440
Alignment:
Q  20 ttggataggatggaaaactgtttgttccaaaaaggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaatggtgt 119  Q
    ||||||||| |||||  ||||||||  | | ||||||| |||||| || ||||| |||||||||||||||||||||  ||| ||  ||||||||||||||    
T  33640658 ttggataggttggaactctgtttgtctccagaaggagtttggagggttaggggttagacagttgaaggagtttaatgttgccttactagggaaatggtgt 33640559  T
Q  120 tggcggatgctggtggatagaggtggtttgtggtatagagttttagttgccaagtatggcgaattaggtggcaggttggaggttgggggccggagtgttt 219  Q
    ||| ||||| | |||||||| |||||||| ||||||||||||||||| |||   ||||||||  |  |||| |||||||||||| |||||||||||  ||    
T  33640558 tggaggatgttagtggataggggtggtttttggtatagagttttagtcgcccgttatggcgaggtgtgtgggaggttggaggtt-ggggccggagttgtt 33640460  T
Q  220 cgtgttggtggagggaggtg 239  Q
    | | ||||||| ||||||||    
T  33640459 cttcttggtggcgggaggtg 33640440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 53 - 238
Target Start/End: Original strand, 17078622 - 17078807
Alignment:
Q  53 ggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaatggtgttggcggatgctggtggatagaggtggtttgtgg 152  Q
    ||||| |||||||||||||||| ||| |||||| || ||||||   ||||| ||||| || ||||||||| ||||||| || |||||  ||||||| |||    
T  17078622 ggagtttggaggtttgggggtgcgacggttgaaagaatttaatttggctttattaggaaagtggtgttggaggatgctagttgataggagtggtttttgg 17078721  T
Q  153 tatagagttttagttgccaagtatggcgaattaggtggcaggttggaggttgggggccggagtgtttcgtgttggtggagggaggt 238  Q
    ||| |||| ||||| |||   ||||||||| ||||||| ||||||||||||||||||||||||  ||| | |||||||||||||||    
T  17078722 tatcgagtcttagtcgcccgttatggcgaagtaggtgggaggttggaggttgggggccggagttgttcttcttggtggagggaggt 17078807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 50 - 238
Target Start/End: Complemental strand, 13086250 - 13086062
Alignment:
Q  50 aaaggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaatggtgttggcggatgctggtggatagaggtggtttg 149  Q
    |||||||  |||||| |||||||| ||  |||||||||||||||||  |||||| ||||| |||||||||||| ||||| |||| |||||||  ||||||    
T  13086250 aaaggaggctggagggttgggggttaggaagttgaaggagtttaatgttgctttgttaggtaaatggtgttggaggatgttggtagatagagtaggtttg 13086151  T
Q  150 tggtatagagttttagttgccaagtatggcgaattaggtggcaggttggaggttgggggccggagtgtttcgtgttggtggagggaggt 238  Q
    |||||||| ||| |||| |||   ||||||||  | || || ||||||||||||||||||||||||  ||| | |||||||| ||||||    
T  13086150 tggtatagtgttctagtcgcccgttatggcgaggttggagggaggttggaggttgggggccggagttgttctttttggtggaaggaggt 13086062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 75 - 239
Target Start/End: Complemental strand, 19256326 - 19256162
Alignment:
Q  75 agacagttgaaggagtttaataatgctttcttagggaaatggtgttggcggatgctggtggatagaggtggtttgtggtatagagttttagttgccaagt 174  Q
    |||||||||||||||||||||  ||| ||  ||||||||||||||||| ||||| | |||||||| |||||||| ||||||||||||||||| |||   |    
T  19256326 agacagttgaaggagtttaatgttgcattactagggaaatggtgttggaggatgttagtggataggggtggtttttggtatagagttttagtcgcccgtt 19256227  T
Q  175 atggcgaattaggtggcaggttggaggttgggggccggagtgtttcgtgttggtggagggaggtg 239  Q
    |||||||  |  |||| ||||||||||||||||||| ||||  ||| | ||||||| ||||||||    
T  19256226 atggcgaggtgtgtgggaggttggaggttgggggccagagttgttcttcttggtggcgggaggtg 19256162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 317 - 488
Target Start/End: Original strand, 23347175 - 23347346
Alignment:
Q  317 gttttggtttgataggtggttaggggatgttcctttttgtgtccgttttagtagactgttagagttaacagagaataagttcatgtctgtggcaaacttg 416  Q
    |||||||| |||||||||| ||||||| | |||| ||||||| || |||||  |  |||| |||||||||||||||||||  ||||| || ||  |||||    
T  23347175 gttttggtctgataggtggataggggaggctcctctttgtgtgcggtttaggcggttgtttgagttaacagagaataagtctatgtccgtcgccgacttg 23347274  T
Q  417 ttctctgttgattcggagcagcggggggttatgtggaggtggagacgtcgtttgtggcagtgggaggaggag 488  Q
     |||||||||||||||||| | ||||||   ||||||||||||||||| | || ||||||||||||||||||    
T  23347275 ctctctgttgattcggagcggtggggggaggtgtggaggtggagacgtaggttatggcagtgggaggaggag 23347346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 20 - 216
Target Start/End: Original strand, 23065445 - 23065641
Alignment:
Q  20 ttggataggatggaaaactgtttgttccaaaaaggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaatggtgt 119  Q
    ||||||||| ||||| || || ||||| |||| |||| |||||||||| ||||| ||| |||||||||||||||||  || |||  |||| |||||||||    
T  23065445 ttggataggttggaataccgtgtgttctaaaatggagcatggaggtttcggggttagaaagttgaaggagtttaatgttgatttactaggtaaatggtgt 23065544  T
Q  120 tggcggatgctggtggatagaggtggtttgtggtatagagttttagttgccaagtatggcgaattaggtggcaggttggaggttgggggccggagtg 216  Q
    | | || || | || |||||||  ||||||||||||   |||||||| |||   ||||||||| ||||||| ||||||||||| |||||||||||||    
T  23065545 tagaggttgttagttgatagagaaggtttgtggtatcatgttttagtcgcccgttatggcgaagtaggtgggaggttggaggtggggggccggagtg 23065641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 59 - 238
Target Start/End: Complemental strand, 33805482 - 33805303
Alignment:
Q  59 tggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaatggtgttggcggatgctggtggatagaggtggtttgtggtataga 158  Q
    |||||| |||||||| ||  |||||||||||||||||  ||| ||  ||||||||||||||||| ||||| | ||||||||||  || |||||||||       
T  33805482 tggagggttgggggtcaggaagttgaaggagtttaatgttgcattgctagggaaatggtgttggaggatgttagtggatagagaaggattgtggtatcat 33805383  T
Q  159 gttttagttgccaagtatggcgaattaggtggcaggttggaggttgggggccggagtgtttcgtgttggtggagggaggt 238  Q
    |||||||| |||   ||||||||| ||||||| ||||||||||| ||||||||||||  ||| | ||||||| |||||||    
T  33805382 gttttagtcgcccgctatggcgaaataggtgggaggttggaggtggggggccggagttgttcttcttggtggcgggaggt 33805303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 50 - 160
Target Start/End: Complemental strand, 26514435 - 26514325
Alignment:
Q  50 aaaggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaatggtgttggcggatgctggtggatagaggtggtttg 149  Q
    ||||||||||||||| ||||||||||||||| | | ||| ||||||| |||||| ||||||||  |||||||| ||||||||||||||||||  || ||     
T  26514435 aaaggagtatggagggttgggggtgagacagataagggaatttaatagtgctttattagggaataggtgttggaggatgctggtggatagagaggggttc 26514336  T
Q  150 tggtatagagt 160  Q
    |||||||||||    
T  26514335 tggtatagagt 26514325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 53 - 238
Target Start/End: Original strand, 18050881 - 18051066
Alignment:
Q  53 ggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaatggtgttggcggatgctggtggatagaggtggtttgtgg 152  Q
    ||||| |||||||||||||||| ||| ||||||  | |||||    | ||| ||||| || ||||||||| ||||||| || |||||  |||||||  ||    
T  18050881 ggagtttggaggtttgggggtgcgacggttgaaataatttaacttggttttattaggaaagtggtgttggaggatgctagttgataggagtggttttcgg 18050980  T
Q  153 tatagagttttagttgccaagtatggcgaattaggtggcaggttggaggttgggggccggagtgtttcgtgttggtggagggaggt 238  Q
    |||  ||| ||||| ||| | ||||||||| ||||||| ||||||||||||||||||||||||  ||| | |||||||||||||||    
T  18050981 tatcaagtcttagtcgccgattatggcgaagtaggtgggaggttggaggttgggggccggagttgttcttcttggtggagggaggt 18051066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 49 - 157
Target Start/End: Original strand, 14843565 - 14843673
Alignment:
Q  49 aaaaggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaatggtgttggcggatgctggtggatagaggtggttt 148  Q
    |||||||||||||||| ||||| |||||| || ||| ||||||||||| || ||| ||||| |||||||||||||| ||| |||| ||||||| ||||||    
T  14843565 aaaaggagtatggagggttgggagtgagaaagctgagggagtttaatagtgatttgttaggtaaatggtgttggcgaatgttggtagatagagatggttt 14843664  T
Q  149 gtggtatag 157  Q
     ||||||||    
T  14843665 ttggtatag 14843673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 42 - 220
Target Start/End: Complemental strand, 21549567 - 21549389
Alignment:
Q  42 tgttccaaaaaggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaatggtgttggcggatgctggtggatagag 141  Q
    ||||| ||||||||| |||||||||||||||||||    |||||||||||||||| ||||||  |||| |||||||||||| ||||| | || ||||||     
T  21549567 tgttctaaaaaggagcatggaggtttgggggtgaggagattgaaggagtttaatattgctttactaggtaaatggtgttggaggatgttagttgatagat 21549468  T
Q  142 gtggtttgtggtat-agagttttagttgccaagtatggcgaattaggtggcaggttggaggttgggggccggagtgtttc 220  Q
      || ||||| ||| ||| ||||||| |||   ||||||||| ||| ||| ||||||||||| ||||| |||||||||||    
T  21549467 aagggttgtgatatcaga-ttttagtcgcccgttatggcgaagtagatgggaggttggaggtggggggtcggagtgtttc 21549389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 317 - 488
Target Start/End: Complemental strand, 25318286 - 25318115
Alignment:
Q  317 gttttggtttgataggtggttaggggatgttcctttttgtgtccgttttagtagactgttagagttaacagagaataagttcatgtctgtggcaaacttg 416  Q
    ||||||||| ||||||||| || |||| | |||| || ||||  | |||||| |  |||| ||||||||| |||||||||| ||||| |||||  |||||    
T  25318286 gttttggttcgataggtggataagggaggctcctcttcgtgtgaggtttagtcggttgtttgagttaacaaagaataagtttatgtccgtggcggacttg 25318187  T
Q  417 ttctctgttgattcggagcagcggggggttatgtggaggtggagacgtcgtttgtggcagtgggaggaggag 488  Q
     | |||||||||||  ||| | |||||| | |||||||||||| |||| | || ||||||||||||||||||    
T  25318186 ctatctgttgattcaaagcggtggggggatttgtggaggtggatacgtaggttatggcagtgggaggaggag 25318115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 317 - 488
Target Start/End: Complemental strand, 26205780 - 26205609
Alignment:
Q  317 gttttggtttgataggtggttaggggatgttcctttttgtgtccgttttagtagactgttagagttaacagagaataagttcatgtctgtggcaaacttg 416  Q
    ||||||||| ||||||||| || |||| | |||| || ||||  | |||||| |  |||| ||||||||| |||||||||| ||||| |||||  |||||    
T  26205780 gttttggttcgataggtggataagggaggctcctcttcgtgtgaggtttagtcggttgtttgagttaacaaagaataagtttatgtccgtggcggacttg 26205681  T
Q  417 ttctctgttgattcggagcagcggggggttatgtggaggtggagacgtcgtttgtggcagtgggaggaggag 488  Q
     | |||||||||||  ||| | |||||| | |||||||||||| |||| | || ||||||||||||||||||    
T  26205680 ctatctgttgattcaaagcggtggggggatttgtggaggtggatacgtaggttatggcagtgggaggaggag 26205609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 37 - 238
Target Start/End: Complemental strand, 19350668 - 19350467
Alignment:
Q  37 ctgtttgttccaaaaaggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaatggtgttggcggatgctggtgga 136  Q
    |||||||||  |||||||||| ||||||| |||||||||| |||||| |||| ||||||   |||||  | || ||||||||||||||| || || | ||    
T  19350668 ctgtttgtttgaaaaaggagtttggaggtctgggggtgaggcagttgcaggaatttaatttagctttgatgggtaaatggtgttggcggttgttgataga 19350569  T
Q  137 tagaggtggtttgtggtatagagttttagttgccaagtatggcgaattaggtggcaggttggaggttgggggccggagtgtttcgtgttggtggagggag 236  Q
    ||||||||| || |||||||| || || || || |  ||||| ||    |  || |||||||||||||||||||||||||| || | |||||||| ||||    
T  19350568 tagaggtgggttttggtatagggtgttggtggcgagatatggtgaggaggcagggaggttggaggttgggggccggagtgtatcatcttggtggaaggag 19350469  T
Q  237 gt 238  Q
    ||    
T  19350468 gt 19350467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 317 - 488
Target Start/End: Complemental strand, 15674261 - 15674086
Alignment:
Q  317 gttttggtttgataggtggttaggggatgttcctttttgtgtccgttttagtagactgttagagttaacagagaataagttcatgtctgtggcaaacttg 416  Q
    |||||||| |||||||||| ||||||| | |||| |||| || || |||||  |  |||| |||||||| ||||||||||  |||||||||||  ||||     
T  15674261 gttttggtctgataggtggataggggaggctcctctttgcgtgcggtttaggcggttgtttgagttaacggagaataagtctatgtctgtggccgactta 15674162  T
Q  417 ttctctgttgattcggagcagcgg----ggggttatgtggaggtggagacgtcgtttgtggcagtgggaggaggag 488  Q
     ||||||||||||| ||||   ||    ||||   ||||||||||||||||| | |||||||||||||||||||||    
T  15674161 ctctctgttgattcagagcgttggggccggggaggtgtggaggtggagacgtaggttgtggcagtgggaggaggag 15674086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 111 - 238
Target Start/End: Complemental strand, 32186333 - 32186206
Alignment:
Q  111 aaatggtgttggcggatgctggtggatagaggtggtttgtggtatagagttttagttgccaagtatggcgaattaggtggcaggttggaggttgggggcc 210  Q
    ||||||||||||| | || |||||||||||||||| || |||||||| || || || || |  ||| | ||  | | ||| |||||||||||||||||||    
T  32186333 aaatggtgttggcagttgttggtggatagaggtgggttttggtatagggtgttggtggcgagatatagtgaggtggctgggaggttggaggttgggggcc 32186234  T
Q  211 ggagtgtttcgtgttggtggagggaggt 238  Q
    |||||| ||| | |||||||||||||||    
T  32186233 ggagtgcttcttcttggtggagggaggt 32186206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 130 - 256
Target Start/End: Complemental strand, 25318478 - 25318359
Alignment:
Q  130 tggtggatagaggtggtttgtggtatagagttttagttgccaagtatggcgaattaggtggcaggttggaggttgggggccggagtgtttcgtgttggtg 229  Q
    |||| |||||||| |||||||||||||  ||||| || ||||  ||||||||||||||| ||||| |||       ||| ||||| ||||| ||||||||    
T  25318478 tggttgatagagggggtttgtggtatacggtttttgtcgccagatatggcgaattaggtcgcagggtgg-------gggacggagagtttcttgttggtg 25318386  T
Q  230 gagggaggtgagtcgtcttaggggtag 256  Q
    |  ||||||||||||||||||| ||||    
T  25318385 gtcggaggtgagtcgtcttaggtgtag 25318359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 90 - 157
Target Start/End: Original strand, 14686477 - 14686544
Alignment:
Q  90 tttaataatgctttcttagggaaatggtgttggcggatgctggtggatagaggtggtttgtggtatag 157  Q
    |||||||  ||||| ||||| |||||||||||||||||| ||||||||||||| || || ||||||||    
T  14686477 tttaatagcgctttgttaggtaaatggtgttggcggatgttggtggatagaggcggattttggtatag 14686544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 50 - 157
Target Start/End: Complemental strand, 25350933 - 25350826
Alignment:
Q  50 aaaggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaatggtgttggcggatgctggtggatagaggtggtttg 149  Q
    |||||||| |||||| ||||| |||||  | || ||||| ||||||  |||||| ||||| ||||||| |||| ||||| |||||||||||| ||| ||     
T  25350933 aaaggagtttggaggattgggtgtgaggaaattaaaggaatttaattgtgctttattaggaaaatggttttggaggatgttggtggatagagatgggttc 25350834  T
Q  150 tggtatag 157  Q
    ||||||||    
T  25350833 tggtatag 25350826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 192 - 238
Target Start/End: Complemental strand, 2923440 - 2923394
Alignment:
Q  192 aggttggaggttgggggccggagtgtttcgtgttggtggagggaggt 238  Q
    ||||||||||||||||| ||||||||||| | |||||||||||||||    
T  2923440 aggttggaggttgggggacggagtgtttcttcttggtggagggaggt 2923394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 111 - 238
Target Start/End: Complemental strand, 4478641 - 4478511
Alignment:
Q  111 aaatggtgttggcggatgctggtggatagaggtggtttgtggtatagagttttagttgccaagtatggcgaattaggtggcaggttggagg---ttgggg 207  Q
    |||||||||||| ||||| | |||||||| |  || |||||||||   |||||||| |||   ||||||||| ||||||| ||||||||||   ||||||    
T  4478641 aaatggtgttggaggatgttagtggatagggaagggttgtggtatcatgttttagtcgcccgttatggcgaagtaggtgggaggttggaggtaattgggg 4478542  T
Q  208 gccggagtgtttcgtgttggtggagggaggt 238  Q
    ||||||||  ||| | |||| ||||||||||    
T  4478541 gccggagttgttcttattggcggagggaggt 4478511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 50 - 238
Target Start/End: Complemental strand, 11469279 - 11469092
Alignment:
Q  50 aaaggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaatggtgttggcggatgctggtggatagaggtggtttg 149  Q
    |||||||| ||||||| ||| ||| ||  ||||||| ||||||||||  || ||  |||| |||||||||||| ||||| |||| |||| ||  || |||    
T  11469279 aaaggagtttggaggtctggcggttaggaagttgaaagagtttaatatagcattgctaggtaaatggtgttggaggatgttggtagataaagaagggttg 11469180  T
Q  150 tggtatagagttttagttgccaagtatggcgaattaggtggcaggttggaggttgggggccggagtgtttcgtgttggtggagggaggt 238  Q
    |||||| | || ||||| |||   ||||| ||  ||||||| ||||||||||  ||||| ||||||  ||| | |||||||||||||||    
T  11469179 tggtatcgtgtgttagtcgcccgatatggtgacgtaggtgggaggttggaggaaggggg-cggagttgttcttcttggtggagggaggt 11469092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 37 - 157
Target Start/End: Original strand, 29976424 - 29976544
Alignment:
Q  37 ctgtttgttccaaaaaggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaatggtgttggcggatgctggtgga 136  Q
    |||||||||  |||||||||| ||||||| |||||||||| ||||||  ||| ||||||   |||||  | || |||||| |||||||| || || | ||    
T  29976424 ctgtttgtttaaaaaaggagtttggaggtctgggggtgaggcagttgcgggaatttaatttagctttgatgggtaaatggcgttggcggttgttgataga 29976523  T
Q  137 tagaggtggtttgtggtatag 157  Q
    ||||||||| || ||||||||    
T  29976524 tagaggtgggttttggtatag 29976544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 463 - 495
Target Start/End: Complemental strand, 33630383 - 33630351
Alignment:
Q  463 gtcgtttgtggcagtgggaggaggagatgttag 495  Q
    |||||||||||||||||||||||||||||||||    
T  33630383 gtcgtttgtggcagtgggaggaggagatgttag 33630351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 194 - 236
Target Start/End: Original strand, 13497697 - 13497739
Alignment:
Q  194 gttggaggttgggggccggagtgtttcgtgttggtggagggag 236  Q
    ||||| ||||||||||||||||||||| ||||| |||||||||    
T  13497697 gttggtggttgggggccggagtgtttcttgttgatggagggag 13497739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 114 - 163
Target Start/End: Complemental strand, 24573763 - 24573714
Alignment:
Q  114 tggtgttggcggatgctggtggatagaggtggtttgtggtatagagtttt 163  Q
    ||||||||| ||||| | |||||||||| ||||||||||| |||||||||    
T  24573763 tggtgttggaggatggtagtggatagagatggtttgtggtttagagtttt 24573714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 80 - 133
Target Start/End: Complemental strand, 34434941 - 34434888
Alignment:
Q  80 gttgaaggagtttaataatgctttcttagggaaatggtgttggcggatgctggt 133  Q
    ||||| ||||||||||| ||| || ||||| |||||||||||||||||| ||||    
T  34434941 gttgagggagtttaatattgcattgttaggtaaatggtgttggcggatgttggt 34434888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 48 - 116
Target Start/End: Complemental strand, 17228704 - 17228636
Alignment:
Q  48 aaaaaggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaatgg 116  Q
    ||||||||  ||||||||||||||||||    ||||| ||||||||||| | |||| ||||||||||||    
T  17228704 aaaaaggataatggaggtttgggggtgaagaggttgagggagtttaatatttctttgttagggaaatgg 17228636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0308 (Bit Score: 67; Significance: 2e-29; HSPs: 1)
Name: scaffold0308
Description:

Target: scaffold0308; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 8 - 238
Target Start/End: Complemental strand, 17898 - 17668
Alignment:
Q  8 taggataattagttggataggatggaaaactgtttgttccaaaaaggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttctta 107  Q
    ||||| ||||| ||| ||||  ||||| ||||| ||||| |||||||||| |||||| |||||||| ||  |||||||||||||||||  ||| ||  ||    
T  17898 taggaaaattacttgaatagattggaatactgtatgttctaaaaaggagtttggagggttgggggtcaggaagttgaaggagtttaatgttgcattgcta 17799  T
Q  108 gggaaatggtgttggcggatgctggtggatagaggtggtttgtggtatagagttttagttgccaagtatggcgaattaggtggcaggttggaggttgggg 207  Q
    ||||||||||||||| ||||| | ||||||||||  || |||||||||   |||||||| |||   ||||||||| ||||||| ||||||||||| |||     
T  17798 gggaaatggtgttggtggatgttagtggatagagaaggattgtggtatcatgttttagtcgcccgttatggcgaaataggtgggaggttggaggtgggga 17699  T
Q  208 gccggagtgtttcgtgttggtggagggaggt 238  Q
    || |||||  ||| | ||||||| |||||||    
T  17698 gctggagttgttcttcttggtggcgggaggt 17668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0179 (Bit Score: 63; Significance: 4e-27; HSPs: 2)
Name: scaffold0179
Description:

Target: scaffold0179; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 53 - 239
Target Start/End: Complemental strand, 8240 - 8054
Alignment:
Q  53 ggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaatggtgttggcggatgctggtggatagaggtggtttgtgg 152  Q
    ||||| ||| ||||||||||||||||||||||  ||||| |||   ||||| ||||  || ||||||||| ||||| | || |||||  ||||||| |||    
T  8240 ggagtttggtggtttgggggtgagacagttgagagagttcaatttggctttgttagaaaagtggtgttggaggatgatagtagataggagtggtttttgg 8141  T
Q  153 tatagagttttagttgccaagtatggcgaattaggtggcaggttggaggttgggggccggagtgtttcgtgttggtggagggaggtg 239  Q
    ||| |||| ||||| |||   |||| |||| ||||||| ||||||||||||||||||||||||  ||||| ||||||||||||||||    
T  8140 tatcgagtcttagtcgcccgttatgacgaagtaggtgggaggttggaggttgggggccggagttgttcgtcttggtggagggaggtg 8054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0179; HSP #2
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 53 - 239
Target Start/End: Complemental strand, 13174 - 12988
Alignment:
Q  53 ggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaatggtgttggcggatgctggtggatagaggtggtttgtgg 152  Q
    ||||| ||| ||||||||||||||||||||||  ||||| |||   ||||| ||||  || ||||||||| ||||| | || |||||  ||||||| |||    
T  13174 ggagtttggtggtttgggggtgagacagttgagagagttcaatttggctttgttagaaaagtggtgttggaggatgatagtagataggagtggtttttgg 13075  T
Q  153 tatagagttttagttgccaagtatggcgaattaggtggcaggttggaggttgggggccggagtgtttcgtgttggtggagggaggtg 239  Q
    ||| |||| ||||| |||   |||| |||| ||||||| ||||||||||||||||||||||||  ||||| ||||||||||||||||    
T  13074 tatcgagtcttagtcgcccgttatgacgaagtaggtgggaggttggaggttgggggccggagttgttcgtcttggtggagggaggtg 12988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 49 - 157
Target Start/End: Original strand, 34037 - 34145
Alignment:
Q  49 aaaaggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaatggtgttggcggatgctggtggatagaggtggttt 148  Q
    |||||||||||||||| ||||| ||||||||| ||| ||||||||||| |||||| ||||| ||| |||||||||| ||| |||| || |||| ||||||    
T  34037 aaaaggagtatggagggttgggagtgagacagctgagggagtttaatagtgctttgttaggtaaaaggtgttggcgaatgttggtagagagagatggttt 34136  T
Q  149 gtggtatag 157  Q
     ||||||||    
T  34137 ttggtatag 34145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 53 - 238
Target Start/End: Complemental strand, 182823 - 182638
Alignment:
Q  53 ggagtatggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaatggtgttggcggatgctggtggatagaggtggtttgtgg 152  Q
    ||||| |||||||||||||||| | | |||||| || ||||||   ||||| ||||| || ||||||||| ||||||| || |||||  |||| || |||    
T  182823 ggagtttggaggtttgggggtgcgtcggttgaaagaatttaatttggctttattaggaaagtggtgttggaggatgctagttgataggagtggattttgg 182724  T
Q  153 tatagagttttagttgccaagtatggcgaattaggtggcaggttggaggttgggggccggagtgtttcgtgttggtggagggaggt 238  Q
    ||| |||| | ||| |||   ||||||||| | ||||| ||||||||| ||||||||||||||  ||| | ||||||| |||||||    
T  182723 tatcgagtctcagtcgcccgttatggcgaagtgggtgggaggttggagtttgggggccggagttgttcttcttggtggcgggaggt 182638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0189 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 58 - 166
Target Start/End: Complemental strand, 6791 - 6683
Alignment:
Q  58 atggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaatggtgttggcggatgctggtggatagaggtggtttgtggtatag 157  Q
    |||| |||||||||||||| ||||||||||| || ||||  || || ||||| || || |||||| ||||| |||| ||  |||| ||||||||||||||    
T  6791 atggtggtttgggggtgaggcagttgaaggaattcaataccgccttgttaggcaagtgatgttggaggatgttggtagagcgaggcggtttgtggtatag 6692  T
Q  158 agttttagt 166  Q
     ||||||||    
T  6691 ggttttagt 6683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 59 - 160
Target Start/End: Original strand, 63737 - 63838
Alignment:
Q  59 tggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaatggtgttggcggatgctggtggatagaggtggtttgtggtataga 158  Q
    |||||| |||||||| || ||||||| ||||||||||   |||||  ||||||||||||||||||||||| || |||| | || |  ||| |||||||||    
T  63737 tggagggttgggggttaggcagttgagggagtttaatttagctttgctagggaaatggtgttggcggatgttgatggacaaagataatttttggtataga 63836  T
Q  159 gt 160  Q
    ||    
T  63837 gt 63838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0912 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0912
Description:

Target: scaffold0912; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 174 - 238
Target Start/End: Original strand, 2426 - 2490
Alignment:
Q  174 tatggcgaattaggtggcaggttggaggttgggggccggagtgtttcgtgttggtggagggaggt 238  Q
    ||||||||| | ||||| ||||||||||||||||||||||||  ||| | ||||||| |||||||    
T  2426 tatggcgaagtgggtgggaggttggaggttgggggccggagttgttcttcttggtggcgggaggt 2490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 60 - 160
Target Start/End: Complemental strand, 36205 - 36105
Alignment:
Q  60 ggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaatggtgttggcggatgctggtggatagaggtggtttgtggtatagag 159  Q
    ||||||||||||||||||    |||| || ||||||   ||| ||||||| |||||||||||| ||||| | || ||||||  |||||||||||||||||    
T  36205 ggaggtttgggggtgagaagaatgaaagaatttaatttggctctcttaggaaaatggtgttggaggatgatagtagatagaaatggtttgtggtatagag 36106  T
Q  160 t 160  Q
    |    
T  36105 t 36105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 59 - 157
Target Start/End: Complemental strand, 28476 - 28378
Alignment:
Q  59 tggaggtttgggggtgagacagttgaaggagtttaataatgctttcttagggaaatggtgttggcggatgctggtggatagaggtggtttgtggtatag 157  Q
    |||||||||||| ||| |  |||||| ||||||||||  ||| || ||||| ||||||||||||||  || ||||||| ||  || |||||||||||||    
T  28476 tggaggtttgggtgtgcggaagttgagggagtttaatgctgcgttgttaggcaaatggtgttggcgtttgttggtggagaggagtagtttgtggtatag 28378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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