View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16014_low_2 (Length: 257)
Name: NF16014_low_2
Description: NF16014
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16014_low_2 |
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Alignment Details
Target: chr4 (Bit Score: 222; Significance: 1e-122; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 35409855 - 35410092
Alignment:
| Q |
1 |
gggtgtttagtttaggccaccaggtagcatttttataatcagggtgccccatgttgatgaattctttgtaccaggactggagttcattgtcagaagaaac |
100 |
Q |
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|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35409855 |
gggtgtttagtttaggccaccaggtagcatttttatgatcagggtgccccatgttgatgaattctttgtaccaggactggagttcattgtcagaagaaat |
35409954 |
T |
|
| Q |
101 |
ggcattcaaatctttgtagtaatggttcacataggtcctgaccaacttctctatactagtccatatgaggagtccatcagccgcataaggataatcttca |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
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| T |
35409955 |
ggcattcaaatctttgtagtaatggttcacataggtcctgaccaacttctctatactagaccatatgaggagtccatcagccgcataaggataatcttca |
35410054 |
T |
|
| Q |
201 |
ataagtagtctaatgccatgtggctgagtggcatctgg |
238 |
Q |
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|||||||||||||||||||||||| ||||||||||||| |
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| T |
35410055 |
ataagtagtctaatgccatgtggccgagtggcatctgg |
35410092 |
T |
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