View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16018_high_6 (Length: 240)
Name: NF16018_high_6
Description: NF16018
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16018_high_6 |
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Alignment Details
Target: chr3 (Bit Score: 145; Significance: 2e-76; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 14 - 221
Target Start/End: Original strand, 14803828 - 14804038
Alignment:
| Q |
14 |
gaatagttaaattacataggaaattaaaaaatacttaacaccaaagttcatatttaaaaacattgaacaatt-aatactaaagttcatgacataaattnn |
112 |
Q |
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| T |
14803828 |
gaatagttaaattacataggaaattaaaaaatacttaacaccaaagttcatatttaaaaacattgaacactttaatactaaagttcatgacataaattta |
14803927 |
T |
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| Q |
113 |
nnnnnnnnnnn--gacatatgacattaagataaacgaaaataagaaaaatgaaatcttcaacacactgaaattacatttaaatcttcctcactttgatga |
210 |
Q |
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| T |
14803928 |
aaaaaaaaaaaaagacatatgacattaagataaacgaaaataagaaaaatgaaatcttcaacacactgagattacatttaaatcttcctcactttgatga |
14804027 |
T |
|
| Q |
211 |
catttgatctt |
221 |
Q |
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||||||||||| |
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| T |
14804028 |
catttgatctt |
14804038 |
T |
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