View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16019_low_9 (Length: 339)
Name: NF16019_low_9
Description: NF16019
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16019_low_9 |
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Alignment Details
Target: chr5 (Bit Score: 317; Significance: 1e-179; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 317; E-Value: 1e-179
Query Start/End: Original strand, 1 - 321
Target Start/End: Complemental strand, 10351657 - 10351337
Alignment:
| Q |
1 |
aaagttaatgacaatcaattttgaagctagagacgtgttaccaacccaataaacttaatttcaactataactgatcaatttggtgaaataacacaactat |
100 |
Q |
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| T |
10351657 |
aaagttaatgacaatcaattttgaagctagagacgtgttaccaacccaataaacttaatttcaactataactgatcaatttggtgaaataacacaactat |
10351558 |
T |
|
| Q |
101 |
cagaaaatcactaattataggcatatcaaaaacgctaaattatcattgacattgagttccatatcatcttcctatgtgaagagtcgcgacctcgttgaag |
200 |
Q |
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| T |
10351557 |
cagaaaatcactaattataggcatatcaaaaacgctaaattatcattgacattgagttccatatcatcttcctatgtgaagagtcgcgacctcgttgaag |
10351458 |
T |
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| Q |
201 |
ggtggcagcgttggatgatacactgttacaccgatttccacaacaactttgttatttgtcatatgaaagtttgagaacaggaacatagtcgggcgggtgg |
300 |
Q |
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| T |
10351457 |
ggtggcagcgttggatgatacaatgttacaccgatttccacaacaactttgttatttgtcatatgaaagtttgagaacaggaacatagtcgggcgggtgg |
10351358 |
T |
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| Q |
301 |
gtactttgctgtgttatctgt |
321 |
Q |
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| T |
10351357 |
gtactttgctgtgttatctgt |
10351337 |
T |
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