View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16020_high_50 (Length: 369)

Name: NF16020_high_50
Description: NF16020
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16020_high_50
NF16020_high_50
[»] chr6 (46 HSPs)
chr6 (317-359)||(9899562-9899604)
chr6 (317-357)||(30859922-30859962)
chr6 (317-357)||(1292555-1292595)
chr6 (317-357)||(5645548-5645588)
chr6 (317-357)||(5645882-5645922)
chr6 (317-357)||(8938888-8938928)
chr6 (317-357)||(10286162-10286202)
chr6 (317-357)||(10286586-10286626)
chr6 (317-357)||(18700403-18700443)
chr6 (317-357)||(29048315-29048355)
chr6 (317-357)||(31038323-31038363)
chr6 (318-357)||(12153582-12153621)
chr6 (318-357)||(32223847-32223886)
chr6 (317-359)||(19048246-19048288)
chr6 (317-357)||(6888785-6888825)
chr6 (317-357)||(6889118-6889158)
chr6 (317-357)||(7873645-7873684)
chr6 (317-357)||(8286313-8286353)
chr6 (317-357)||(26841622-26841662)
chr6 (318-357)||(18693652-18693691)
chr6 (317-356)||(29048710-29048749)
chr6 (318-357)||(32224241-32224280)
chr6 (329-359)||(5645730-5645760)
chr6 (317-351)||(7829516-7829550)
chr6 (329-359)||(7873807-7873837)
chr6 (329-359)||(8286585-8286615)
chr6 (329-359)||(10286294-10286324)
chr6 (329-359)||(19048409-19048439)
chr6 (317-355)||(29836168-29836206)
chr6 (317-359)||(29836388-29836430)
chr6 (317-359)||(30860346-30860388)
chr6 (329-359)||(31038625-31038655)
chr6 (317-357)||(1292890-1292930)
chr6 (329-357)||(8286385-8286413)
chr6 (317-357)||(8286706-8286746)
chr6 (329-357)||(8939163-8939191)
chr6 (329-357)||(9899725-9899753)
chr6 (317-357)||(15833497-15833537)
chr6 (329-357)||(18700506-18700534)
chr6 (317-357)||(19048671-19048711)
chr6 (329-357)||(29048447-29048475)
chr6 (329-357)||(29048589-29048617)
chr6 (329-357)||(30860166-30860194)
chr6 (329-357)||(30860257-30860285)
chr6 (317-357)||(31038778-31038818)
chr6 (329-357)||(32223978-32224006)
[»] chr3 (56 HSPs)
chr3 (317-359)||(18024567-18024609)
chr3 (317-359)||(30385183-30385225)
chr3 (317-359)||(42592402-42592444)
chr3 (317-359)||(10817816-10817858)
chr3 (317-357)||(6951161-6951201)
chr3 (317-357)||(18024933-18024973)
chr3 (317-357)||(28004268-28004308)
chr3 (317-357)||(38771634-38771674)
chr3 (317-357)||(40941849-40941889)
chr3 (317-356)||(17934099-17934138)
chr3 (317-352)||(25629433-25629468)
chr3 (318-357)||(38771240-38771279)
chr3 (318-357)||(51891316-51891355)
chr3 (319-357)||(2800593-2800631)
chr3 (317-359)||(13867687-13867729)
chr3 (317-354)||(12061626-12061663)
chr3 (318-355)||(23090623-23090660)
chr3 (317-357)||(2800837-2800877)
chr3 (317-357)||(6098401-6098441)
chr3 (317-357)||(12062022-12062062)
chr3 (317-357)||(17933826-17933866)
chr3 (317-357)||(19794791-19794831)
chr3 (317-357)||(30267393-30267433)
chr3 (317-357)||(30267787-30267827)
chr3 (317-357)||(51890982-51891022)
chr3 (317-352)||(53204525-53204560)
chr3 (329-359)||(1364432-1364462)
chr3 (329-359)||(6951008-6951038)
chr3 (329-359)||(17933958-17933988)
chr3 (329-359)||(19794560-19794590)
chr3 (329-359)||(25629706-25629736)
chr3 (329-359)||(28004400-28004430)
chr3 (318-359)||(1364602-1364643)
chr3 (317-357)||(1069834-1069874)
chr3 (329-357)||(1069997-1070025)
chr3 (317-357)||(1364269-1364309)
chr3 (329-357)||(6951041-6951069)
chr3 (317-357)||(10817514-10817554)
chr3 (329-357)||(10817727-10817755)
chr3 (329-357)||(18024730-18024758)
chr3 (329-357)||(18024761-18024789)
chr3 (329-357)||(18024873-18024901)
chr3 (317-357)||(18270629-18270669)
chr3 (329-357)||(18270993-18271021)
chr3 (317-357)||(22976983-22977023)
chr3 (329-357)||(25629596-25629624)
chr3 (317-357)||(28033045-28033085)
chr3 (317-357)||(28033440-28033480)
chr3 (329-357)||(38771371-38771399)
chr3 (329-357)||(40941555-40941583)
chr3 (317-357)||(42213153-42213193)
chr3 (329-357)||(42213285-42213313)
chr3 (317-357)||(42213548-42213588)
chr3 (329-357)||(42592565-42592593)
chr3 (329-357)||(42592596-42592624)
chr3 (317-357)||(53204857-53204897)
[»] chr2 (55 HSPs)
chr2 (317-359)||(39110074-39110116)
chr2 (317-357)||(36099295-36099335)
chr2 (317-357)||(45001055-45001095)
chr2 (317-357)||(7031807-7031847)
chr2 (317-357)||(7182352-7182392)
chr2 (317-357)||(7182715-7182755)
chr2 (317-357)||(15129645-15129685)
chr2 (317-357)||(18905026-18905066)
chr2 (317-357)||(27516161-27516201)
chr2 (317-357)||(27516557-27516597)
chr2 (317-357)||(30785705-30785745)
chr2 (317-357)||(31309783-31309823)
chr2 (317-357)||(35251893-35251933)
chr2 (317-357)||(39110440-39110480)
chr2 (317-356)||(23461435-23461474)
chr2 (318-357)||(28958131-28958170)
chr2 (317-354)||(38578201-38578238)
chr2 (317-357)||(6645523-6645563)
chr2 (317-357)||(7032172-7032212)
chr2 (316-356)||(10414355-10414395)
chr2 (317-357)||(15130070-15130110)
chr2 (317-357)||(18904601-18904641)
chr2 (317-357)||(26892466-26892506)
chr2 (317-357)||(26897905-26897945)
chr2 (317-357)||(28957797-28957837)
chr2 (317-357)||(31309420-31309460)
chr2 (317-357)||(35251498-35251538)
chr2 (317-353)||(35589186-35589222)
chr2 (318-357)||(26892861-26892900)
chr2 (318-357)||(26898300-26898339)
chr2 (318-357)||(38577833-38577872)
chr2 (329-359)||(6645765-6645795)
chr2 (329-359)||(7182484-7182514)
chr2 (329-359)||(26892708-26892738)
chr2 (329-359)||(26898147-26898177)
chr2 (329-359)||(30785868-30785898)
chr2 (329-359)||(31309599-31309629)
chr2 (329-359)||(35251740-35251770)
chr2 (329-359)||(38577997-38578027)
chr2 (317-357)||(6645887-6645927)
chr2 (329-357)||(7031939-7031967)
chr2 (329-357)||(7032081-7032109)
chr2 (317-357)||(10413996-10414036)
chr2 (329-357)||(10414234-10414262)
chr2 (329-357)||(15129808-15129836)
chr2 (329-357)||(15129950-15129978)
chr2 (329-357)||(18904764-18904792)
chr2 (329-357)||(18904906-18904934)
chr2 (329-357)||(26892741-26892769)
chr2 (329-357)||(31309632-31309660)
chr2 (329-357)||(36099458-36099486)
chr2 (329-357)||(36099600-36099628)
chr2 (329-357)||(39110146-39110174)
chr2 (329-357)||(39110177-39110205)
chr2 (329-357)||(39110320-39110348)
[»] chr8 (74 HSPs)
chr8 (317-357)||(10398714-10398754)
chr8 (318-356)||(4881083-4881121)
chr8 (317-357)||(4325990-4326030)
chr8 (317-357)||(5822041-5822081)
chr8 (317-357)||(5876852-5876892)
chr8 (317-357)||(11919662-11919702)
chr8 (317-357)||(12823268-12823308)
chr8 (317-357)||(14054790-14054830)
chr8 (317-357)||(21524673-21524713)
chr8 (317-357)||(23152696-23152736)
chr8 (317-357)||(29802162-29802202)
chr8 (317-357)||(29802587-29802627)
chr8 (317-357)||(41387568-41387608)
chr8 (317-357)||(45467439-45467479)
chr8 (317-356)||(45467826-45467865)
chr8 (317-359)||(9237314-9237356)
chr8 (317-355)||(9237774-9237812)
chr8 (312-357)||(4881477-4881522)
chr8 (320-357)||(12849969-12850006)
chr8 (316-357)||(12850360-12850401)
chr8 (317-357)||(3318054-3318094)
chr8 (317-357)||(4325596-4325636)
chr8 (317-357)||(11901127-11901167)
chr8 (317-357)||(12823631-12823671)
chr8 (317-357)||(15304348-15304388)
chr8 (317-357)||(15484717-15484757)
chr8 (317-357)||(21524278-21524318)
chr8 (318-357)||(3317542-3317581)
chr8 (318-357)||(6513564-6513603)
chr8 (317-356)||(11901512-11901551)
chr8 (329-359)||(162447-162477)
chr8 (329-359)||(1259779-1259809)
chr8 (329-359)||(4325728-4325758)
chr8 (329-359)||(9237509-9237539)
chr8 (329-359)||(15304226-15304256)
chr8 (329-359)||(15484595-15484625)
chr8 (317-357)||(162283-162324)
chr8 (323-356)||(41387148-41387181)
chr8 (317-357)||(162679-162719)
chr8 (317-357)||(2916850-2916890)
chr8 (329-357)||(3317673-3317701)
chr8 (329-357)||(3317793-3317821)
chr8 (329-357)||(4325930-4325958)
chr8 (329-357)||(4881245-4881273)
chr8 (317-357)||(5821676-5821716)
chr8 (329-357)||(5821808-5821836)
chr8 (329-357)||(5821950-5821978)
chr8 (329-357)||(5876536-5876564)
chr8 (329-357)||(5876680-5876708)
chr8 (329-357)||(5876711-5876739)
chr8 (329-357)||(5881572-5881600)
chr8 (329-357)||(5881603-5881631)
chr8 (329-357)||(6513413-6513441)
chr8 (329-357)||(9237478-9237506)
chr8 (329-357)||(9237621-9237649)
chr8 (329-357)||(10397794-10397822)
chr8 (329-357)||(10397905-10397933)
chr8 (329-357)||(10398483-10398511)
chr8 (329-357)||(10398594-10398622)
chr8 (329-357)||(11901451-11901479)
chr8 (329-357)||(12823371-12823399)
chr8 (317-357)||(14055125-14055165)
chr8 (329-357)||(15304197-15304225)
chr8 (329-357)||(15484566-15484594)
chr8 (317-357)||(23152275-23152315)
chr8 (329-357)||(23152550-23152578)
chr8 (329-357)||(23152581-23152609)
chr8 (329-357)||(29802325-29802353)
chr8 (329-357)||(35103353-35103381)
chr8 (317-357)||(35103616-35103656)
chr8 (317-357)||(35181720-35181760)
chr8 (329-357)||(41387417-41387445)
chr8 (329-357)||(41387448-41387476)
chr8 (329-357)||(45467563-45467591)
[»] chr7 (33 HSPs)
chr7 (317-357)||(22151877-22151917)
chr7 (317-357)||(22207792-22207832)
chr7 (317-357)||(23350917-23350957)
chr7 (317-357)||(23351372-23351412)
chr7 (317-357)||(24417497-24417537)
chr7 (317-357)||(36701360-36701400)
chr7 (317-357)||(36701756-36701796)
chr7 (317-357)||(39383807-39383847)
chr7 (317-357)||(45057543-45057583)
chr7 (317-359)||(19069966-19070008)
chr7 (317-359)||(19105613-19105655)
chr7 (317-359)||(24417102-24417144)
chr7 (317-357)||(8735744-8735784)
chr7 (317-357)||(11687008-11687048)
chr7 (317-357)||(22207467-22207507)
chr7 (317-356)||(45057878-45057917)
chr7 (329-359)||(8735908-8735938)
chr7 (317-359)||(11687401-11687443)
chr7 (329-359)||(23351250-23351280)
chr7 (317-355)||(36783015-36783053)
chr7 (329-359)||(45057615-45057645)
chr7 (317-354)||(8736143-8736180)
chr7 (326-359)||(18802466-18802499)
chr7 (317-354)||(22227235-22227272)
chr7 (329-357)||(22151757-22151785)
chr7 (329-357)||(22207621-22207649)
chr7 (329-357)||(22207672-22207700)
chr7 (329-357)||(23350989-23351017)
chr7 (329-357)||(23351049-23351077)
chr7 (329-357)||(23351109-23351137)
chr7 (329-357)||(23351221-23351249)
chr7 (329-357)||(36701636-36701664)
chr7 (317-357)||(38340730-38340770)
[»] chr4 (32 HSPs)
chr4 (317-357)||(27509635-27509675)
chr4 (317-357)||(32617613-32617653)
chr4 (317-357)||(9100457-9100497)
chr4 (317-357)||(19630765-19630805)
chr4 (317-357)||(25764364-25764404)
chr4 (317-357)||(31208510-31208550)
chr4 (317-357)||(39899115-39899155)
chr4 (317-357)||(52766155-52766195)
chr4 (318-357)||(23329813-23329852)
chr4 (317-356)||(32617218-32617257)
chr4 (317-355)||(39899501-39899539)
chr4 (317-357)||(9203575-9203615)
chr4 (317-357)||(9207794-9207834)
chr4 (317-357)||(11822991-11823031)
chr4 (317-357)||(19631159-19631199)
chr4 (317-357)||(36611044-36611084)
chr4 (317-357)||(36611380-36611420)
chr4 (318-357)||(25764760-25764799)
chr4 (329-359)||(11822838-11822868)
chr4 (329-359)||(23330054-23330084)
chr4 (329-359)||(52766318-52766348)
chr4 (329-359)||(55013847-55013877)
chr4 (317-350)||(11822668-11822701)
chr4 (317-357)||(93608-93648)
chr4 (329-357)||(19631039-19631067)
chr4 (317-357)||(26107987-26108027)
chr4 (329-357)||(27509850-27509878)
chr4 (329-357)||(32617381-32617409)
chr4 (329-357)||(39899247-39899275)
chr4 (317-357)||(51949277-51949317)
chr4 (329-357)||(51949577-51949605)
chr4 (317-357)||(55014050-55014090)
[»] scaffold0009 (2 HSPs)
scaffold0009 (317-359)||(6674-6716)
scaffold0009 (329-357)||(6948-6976)
[»] scaffold0295 (2 HSPs)
scaffold0295 (317-357)||(8232-8272)
scaffold0295 (329-359)||(8078-8108)
[»] scaffold0180 (3 HSPs)
scaffold0180 (317-357)||(18733-18773)
scaffold0180 (329-357)||(18440-18468)
scaffold0180 (329-357)||(18471-18499)
[»] scaffold0120 (3 HSPs)
scaffold0120 (317-357)||(27671-27711)
scaffold0120 (329-357)||(27915-27943)
scaffold0120 (329-357)||(27946-27974)
[»] scaffold0026 (2 HSPs)
scaffold0026 (317-357)||(99996-100036)
scaffold0026 (317-357)||(99601-99641)
[»] scaffold0017 (1 HSPs)
scaffold0017 (317-357)||(172927-172967)
[»] scaffold0012 (2 HSPs)
scaffold0012 (317-357)||(144720-144760)
scaffold0012 (329-359)||(144883-144913)
[»] chr5 (64 HSPs)
chr5 (317-357)||(1155966-1156006)
chr5 (317-357)||(4349497-4349537)
chr5 (317-357)||(4349891-4349931)
chr5 (317-357)||(6172357-6172397)
chr5 (317-357)||(8127474-8127514)
chr5 (317-357)||(9040745-9040785)
chr5 (317-357)||(9438239-9438279)
chr5 (317-357)||(14858298-14858338)
chr5 (317-357)||(16791973-16792013)
chr5 (317-357)||(21289546-21289586)
chr5 (317-357)||(22803606-22803646)
chr5 (317-357)||(24100284-24100324)
chr5 (317-357)||(31369943-31369983)
chr5 (317-357)||(37812233-37812273)
chr5 (317-357)||(42026285-42026325)
chr5 (317-357)||(42026680-42026720)
chr5 (317-357)||(42381794-42381834)
chr5 (317-357)||(42382189-42382229)
chr5 (317-357)||(43476454-43476494)
chr5 (320-359)||(10570397-10570436)
chr5 (317-357)||(1156360-1156400)
chr5 (317-357)||(6131866-6131906)
chr5 (317-357)||(6132262-6132302)
chr5 (317-357)||(9438633-9438673)
chr5 (317-357)||(14858591-14858631)
chr5 (317-357)||(29906298-29906338)
chr5 (317-357)||(37812567-37812607)
chr5 (317-357)||(42381204-42381244)
chr5 (317-352)||(8127813-8127848)
chr5 (318-357)||(17094206-17094245)
chr5 (318-357)||(17094600-17094639)
chr5 (318-357)||(36442163-36442202)
chr5 (329-359)||(6172125-6172155)
chr5 (329-359)||(10503875-10503905)
chr5 (317-351)||(10504034-10504068)
chr5 (329-359)||(10570277-10570307)
chr5 (329-359)||(17094447-17094477)
chr5 (329-359)||(20841868-20841898)
chr5 (329-359)||(21289393-21289423)
chr5 (329-359)||(31369851-31369881)
chr5 (329-359)||(36442404-36442434)
chr5 (329-359)||(42381957-42381987)
chr5 (317-359)||(43476059-43476101)
chr5 (329-357)||(1156038-1156066)
chr5 (329-357)||(1156098-1156126)
chr5 (329-357)||(1156240-1156268)
chr5 (329-357)||(1156300-1156328)
chr5 (329-357)||(4349629-4349657)
chr5 (329-357)||(6132142-6132170)
chr5 (317-357)||(6171963-6172003)
chr5 (329-357)||(9040817-9040845)
chr5 (329-357)||(9438513-9438541)
chr5 (317-357)||(10570034-10570074)
chr5 (329-357)||(13476908-13476936)
chr5 (317-357)||(22803210-22803250)
chr5 (329-357)||(22803342-22803370)
chr5 (329-357)||(24100164-24100192)
chr5 (317-357)||(29905993-29906033)
chr5 (317-357)||(36442557-36442597)
chr5 (329-357)||(37812365-37812393)
chr5 (329-357)||(37812507-37812535)
chr5 (329-357)||(42026417-42026445)
chr5 (321-357)||(42381599-42381635)
chr5 (329-357)||(42381926-42381954)
[»] chr1 (26 HSPs)
chr1 (317-357)||(7203960-7204000)
chr1 (317-357)||(7204323-7204363)
chr1 (317-357)||(10579296-10579336)
chr1 (317-357)||(10579691-10579731)
chr1 (317-357)||(11652878-11652918)
chr1 (317-357)||(14499593-14499633)
chr1 (317-357)||(17738682-17738722)
chr1 (317-357)||(17750128-17750168)
chr1 (317-357)||(48225410-48225450)
chr1 (318-357)||(14499259-14499298)
chr1 (318-357)||(28999446-28999485)
chr1 (318-359)||(52051233-52051274)
chr1 (329-359)||(7204201-7204231)
chr1 (329-359)||(10579459-10579489)
chr1 (329-359)||(14499421-14499451)
chr1 (329-359)||(52051474-52051504)
chr1 (329-357)||(10579428-10579456)
chr1 (317-357)||(13834713-13834753)
chr1 (329-357)||(13834845-13834873)
chr1 (329-357)||(13834987-13835015)
chr1 (317-357)||(17738256-17738296)
chr1 (329-357)||(17738531-17738559)
chr1 (329-357)||(17738562-17738590)
chr1 (317-357)||(17750554-17750594)
chr1 (317-357)||(28991026-28991066)
chr1 (326-358)||(48467267-48467299)
[»] scaffold0096 (2 HSPs)
scaffold0096 (319-357)||(4873-4911)
scaffold0096 (317-357)||(5204-5244)
[»] scaffold0352 (3 HSPs)
scaffold0352 (317-357)||(11440-11480)
scaffold0352 (329-359)||(11318-11348)
scaffold0352 (317-357)||(11137-11177)
[»] scaffold0135 (13 HSPs)
scaffold0135 (317-357)||(1658-1698)
scaffold0135 (317-357)||(5873-5913)
scaffold0135 (317-357)||(10088-10128)
scaffold0135 (317-357)||(14303-14343)
scaffold0135 (317-357)||(18518-18558)
scaffold0135 (317-357)||(22733-22773)
scaffold0135 (317-357)||(26948-26988)
scaffold0135 (329-359)||(5780-5810)
scaffold0135 (329-359)||(9995-10025)
scaffold0135 (329-359)||(14210-14240)
scaffold0135 (329-359)||(18425-18455)
scaffold0135 (329-359)||(22640-22670)
scaffold0135 (329-359)||(26855-26885)
[»] scaffold0108 (1 HSPs)
scaffold0108 (317-357)||(11784-11824)
[»] scaffold0237 (1 HSPs)
scaffold0237 (317-359)||(26206-26248)
[»] scaffold0025 (1 HSPs)
scaffold0025 (317-358)||(56778-56819)


Alignment Details
Target: chr6 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 46)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 317 - 359
Target Start/End: Original strand, 9899562 - 9899604
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttcat 359  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  9899562 cttaattactcatttggtcccttaacttattttttggtttcat 9899604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 317 - 357
Target Start/End: Original strand, 30859922 - 30859962
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  30859922 cttaattactcatttggtcccttaacttattttttggtttc 30859962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 317 - 357
Target Start/End: Original strand, 1292555 - 1292595
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  1292555 cttaattactcttttggtcccttaacttattttttggtttc 1292595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 317 - 357
Target Start/End: Original strand, 5645548 - 5645588
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  5645548 cttaattactcttttggtcccttaacttattttttggtttc 5645588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 317 - 357
Target Start/End: Complemental strand, 5645922 - 5645882
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  5645922 cttaattactcttttggtcccttaacttattttttggtttc 5645882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 317 - 357
Target Start/End: Original strand, 8938888 - 8938928
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  8938888 cttaattactcttttggtcccttaacttattttttggtttc 8938928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 317 - 357
Target Start/End: Original strand, 10286162 - 10286202
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  10286162 cttaattactcttttggtcccttaacttattttttggtttc 10286202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 317 - 357
Target Start/End: Complemental strand, 10286626 - 10286586
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  10286626 cttaattactcttttggtcccttaacttattttttggtttc 10286586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 317 - 357
Target Start/End: Original strand, 18700403 - 18700443
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  18700403 cttaattactcttttggtcccttaacttattttttggtttc 18700443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 317 - 357
Target Start/End: Original strand, 29048315 - 29048355
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  29048315 cttaattactcatttggtcccttaacttattttttagtttc 29048355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 317 - 357
Target Start/End: Original strand, 31038323 - 31038363
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  31038323 cttaattactcttttggtcccttaacttattttttggtttc 31038363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 318 - 357
Target Start/End: Complemental strand, 12153621 - 12153582
Alignment:
Q  318 ttaattactcatttggtcccttaacttattttttggtttc 357  Q
    |||||||||| |||||||||||||||||||||||||||||    
T  12153621 ttaattactcttttggtcccttaacttattttttggtttc 12153582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 318 - 357
Target Start/End: Original strand, 32223847 - 32223886
Alignment:
Q  318 ttaattactcatttggtcccttaacttattttttggtttc 357  Q
    |||||||||| |||||||||||||||||||||||||||||    
T  32223847 ttaattactcttttggtcccttaacttattttttggtttc 32223886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 317 - 359
Target Start/End: Original strand, 19048246 - 19048288
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttcat 359  Q
    ||||||||||  |||||||||||||||||||||||||||||||    
T  19048246 cttaattacttttttggtcccttaacttattttttggtttcat 19048288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 317 - 357
Target Start/End: Original strand, 6888785 - 6888825
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||| ||||||||||||| |||||||||||||||    
T  6888785 cttaattactcttttggtcccttaatttattttttggtttc 6888825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 317 - 357
Target Start/End: Complemental strand, 6889158 - 6889118
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||| |||||||||||||||||||||||| ||||    
T  6889158 cttaattactcttttggtcccttaacttattttttgatttc 6889118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 317 - 357
Target Start/End: Original strand, 7873645 - 7873684
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  7873645 cttaattactc-tttggtcccttaacttattttttggtttc 7873684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 317 - 357
Target Start/End: Original strand, 8286313 - 8286353
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||| ||||||| |||||||||||||||||||||    
T  8286313 cttaattactcttttggtctcttaacttattttttggtttc 8286353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 317 - 357
Target Start/End: Complemental strand, 26841662 - 26841622
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||| ||| |||||||||||||||||||||||||    
T  26841662 cttaattactctttttgtcccttaacttattttttggtttc 26841622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 318 - 357
Target Start/End: Complemental strand, 18693691 - 18693652
Alignment:
Q  318 ttaattactcatttggtcccttaacttattttttggtttc 357  Q
    |||||||||  |||||||||||||||||||||||||||||    
T  18693691 ttaattacttttttggtcccttaacttattttttggtttc 18693652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 356
Target Start/End: Complemental strand, 29048749 - 29048710
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggttt 356  Q
    |||||||| || ||||||||||||||||||||||||||||    
T  29048749 cttaattattcttttggtcccttaacttattttttggttt 29048710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 318 - 357
Target Start/End: Complemental strand, 32224280 - 32224241
Alignment:
Q  318 ttaattactcatttggtcccttaacttattttttggtttc 357  Q
    |||||||||| ||||||||||||||||| |||||||||||    
T  32224280 ttaattactcttttggtcccttaacttaatttttggtttc 32224241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 329 - 359
Target Start/End: Complemental strand, 5645760 - 5645730
Alignment:
Q  329 tttggtcccttaacttattttttggtttcat 359  Q
    |||||||||||||||||||||||||||||||    
T  5645760 tttggtcccttaacttattttttggtttcat 5645730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 317 - 351
Target Start/End: Complemental strand, 7829550 - 7829516
Alignment:
Q  317 cttaattactcatttggtcccttaacttatttttt 351  Q
    ||||||||||| |||||||||||||||||||||||    
T  7829550 cttaattactcttttggtcccttaacttatttttt 7829516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 329 - 359
Target Start/End: Original strand, 7873807 - 7873837
Alignment:
Q  329 tttggtcccttaacttattttttggtttcat 359  Q
    |||||||||||||||||||||||||||||||    
T  7873807 tttggtcccttaacttattttttggtttcat 7873837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 329 - 359
Target Start/End: Complemental strand, 8286615 - 8286585
Alignment:
Q  329 tttggtcccttaacttattttttggtttcat 359  Q
    |||||||||||||||||||||||||||||||    
T  8286615 tttggtcccttaacttattttttggtttcat 8286585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 329 - 359
Target Start/End: Original strand, 10286294 - 10286324
Alignment:
Q  329 tttggtcccttaacttattttttggtttcat 359  Q
    |||||||||||||||||||||||||||||||    
T  10286294 tttggtcccttaacttattttttggtttcat 10286324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 329 - 359
Target Start/End: Original strand, 19048409 - 19048439
Alignment:
Q  329 tttggtcccttaacttattttttggtttcat 359  Q
    |||||||||||||||||||||||||||||||    
T  19048409 tttggtcccttaacttattttttggtttcat 19048439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 317 - 355
Target Start/End: Complemental strand, 29836206 - 29836168
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtt 355  Q
    |||||||| ||| ||||||||||||||||||||||||||    
T  29836206 cttaattattcagttggtcccttaacttattttttggtt 29836168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 317 - 359
Target Start/End: Complemental strand, 29836430 - 29836388
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttcat 359  Q
    ||||||||||  ||||||||| |||||||||||||||||||||    
T  29836430 cttaattactattttggtcccctaacttattttttggtttcat 29836388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 317 - 359
Target Start/End: Complemental strand, 30860388 - 30860346
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttcat 359  Q
    ||||||||||||||  |||||||||||||||||||| ||||||    
T  30860388 cttaattactcattcagtcccttaacttattttttgatttcat 30860346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 329 - 359
Target Start/End: Complemental strand, 31038655 - 31038625
Alignment:
Q  329 tttggtcccttaacttattttttggtttcat 359  Q
    |||||||||||||||||||||||||||||||    
T  31038655 tttggtcccttaacttattttttggtttcat 31038625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 317 - 357
Target Start/End: Complemental strand, 1292930 - 1292890
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||| |||||||  ||||||||||||||||||||    
T  1292930 cttaattactcttttggtcttttaacttattttttggtttc 1292890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 357
Target Start/End: Original strand, 8286385 - 8286413
Alignment:
Q  329 tttggtcccttaacttattttttggtttc 357  Q
    |||||||||||||||||||||||||||||    
T  8286385 tttggtcccttaacttattttttggtttc 8286413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 317 - 357
Target Start/End: Complemental strand, 8286746 - 8286706
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||  ||||| |||||||||||||||||||||||    
T  8286746 cttaattacttttttgggcccttaacttattttttggtttc 8286706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 357
Target Start/End: Complemental strand, 8939191 - 8939163
Alignment:
Q  329 tttggtcccttaacttattttttggtttc 357  Q
    |||||||||||||||||||||||||||||    
T  8939191 tttggtcccttaacttattttttggtttc 8939163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 357
Target Start/End: Original strand, 9899725 - 9899753
Alignment:
Q  329 tttggtcccttaacttattttttggtttc 357  Q
    |||||||||||||||||||||||||||||    
T  9899725 tttggtcccttaacttattttttggtttc 9899753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 317 - 357
Target Start/End: Original strand, 15833497 - 15833537
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||| |||||| |||||||||||||||| |||||    
T  15833497 cttaattactcttttggttccttaacttatttttttgtttc 15833537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 357
Target Start/End: Original strand, 18700506 - 18700534
Alignment:
Q  329 tttggtcccttaacttattttttggtttc 357  Q
    |||||||||||||||||||||||||||||    
T  18700506 tttggtcccttaacttattttttggtttc 18700534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 317 - 357
Target Start/End: Complemental strand, 19048711 - 19048671
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||| ||||||||||||| ||||||||| |||||    
T  19048711 cttaattactcttttggtcccttaatttattttttagtttc 19048671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 357
Target Start/End: Original strand, 29048447 - 29048475
Alignment:
Q  329 tttggtcccttaacttattttttggtttc 357  Q
    |||||||||||||||||||||||||||||    
T  29048447 tttggtcccttaacttattttttggtttc 29048475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 357
Target Start/End: Complemental strand, 29048617 - 29048589
Alignment:
Q  329 tttggtcccttaacttattttttggtttc 357  Q
    |||||||||||||||||||||||||||||    
T  29048617 tttggtcccttaacttattttttggtttc 29048589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 357
Target Start/End: Complemental strand, 30860194 - 30860166
Alignment:
Q  329 tttggtcccttaacttattttttggtttc 357  Q
    |||||||||||||||||||||||||||||    
T  30860194 tttggtcccttaacttattttttggtttc 30860166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 357
Target Start/End: Complemental strand, 30860285 - 30860257
Alignment:
Q  329 tttggtcccttaacttattttttggtttc 357  Q
    |||||||||||||||||||||||||||||    
T  30860285 tttggtcccttaacttattttttggtttc 30860257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 317 - 357
Target Start/End: Complemental strand, 31038818 - 31038778
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||| ||| ||||||||||||| |||||||||||    
T  31038818 cttaattactcttttagtcccttaacttaatttttggtttc 31038778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 357
Target Start/End: Original strand, 32223978 - 32224006
Alignment:
Q  329 tttggtcccttaacttattttttggtttc 357  Q
    |||||||||||||||||||||||||||||    
T  32223978 tttggtcccttaacttattttttggtttc 32224006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 56)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 317 - 359
Target Start/End: Original strand, 18024567 - 18024609
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttcat 359  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  18024567 cttaattactcatttggtcccttaacttattttttggtttcat 18024609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 317 - 359
Target Start/End: Original strand, 30385183 - 30385225
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttcat 359  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  30385183 cttaattactcatttggtcccttaacttattttttggtttcat 30385225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 317 - 359
Target Start/End: Original strand, 42592402 - 42592444
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttcat 359  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  42592402 cttaattactcatttggtcccttaacttattttttggtttcat 42592444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 317 - 359
Target Start/End: Complemental strand, 10817858 - 10817816
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttcat 359  Q
    ||||||| |||||||||||||||||||||||||||||||||||    
T  10817858 cttaattcctcatttggtcccttaacttattttttggtttcat 10817816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 317 - 357
Target Start/End: Complemental strand, 6951201 - 6951161
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  6951201 cttaattactcttttggtcccttaacttattttttggtttc 6951161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 317 - 357
Target Start/End: Complemental strand, 18024973 - 18024933
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    |||||||||| ||||||||||||||||||||||||||||||    
T  18024973 cttaattactaatttggtcccttaacttattttttggtttc 18024933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 317 - 357
Target Start/End: Original strand, 28004268 - 28004308
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  28004268 cttaattactcttttggtcccttaacttattttttggtttc 28004308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 317 - 357
Target Start/End: Complemental strand, 38771674 - 38771634
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  38771674 cttaattactcttttggtcccttaacttattttttggtttc 38771634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 317 - 357
Target Start/End: Complemental strand, 40941889 - 40941849
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  40941889 cttaattactcatttgatcccttaacttattttttggtttc 40941849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 317 - 356
Target Start/End: Complemental strand, 17934138 - 17934099
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggttt 356  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  17934138 cttaattactcatttagtcccttaacttattttttggttt 17934099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 317 - 352
Target Start/End: Original strand, 25629433 - 25629468
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttg 352  Q
    ||||||||||||||||||||||||||||||||||||    
T  25629433 cttaattactcatttggtcccttaacttattttttg 25629468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 318 - 357
Target Start/End: Original strand, 38771240 - 38771279
Alignment:
Q  318 ttaattactcatttggtcccttaacttattttttggtttc 357  Q
    |||||||||| |||||||||||||||||||||||||||||    
T  38771240 ttaattactcttttggtcccttaacttattttttggtttc 38771279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 318 - 357
Target Start/End: Complemental strand, 51891355 - 51891316
Alignment:
Q  318 ttaattactcatttggtcccttaacttattttttggtttc 357  Q
    |||||||||| |||||||||||||||||||||||||||||    
T  51891355 ttaattactcttttggtcccttaacttattttttggtttc 51891316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 319 - 357
Target Start/End: Original strand, 2800593 - 2800631
Alignment:
Q  319 taattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  2800593 taattactcttttggtcccttaacttattttttggtttc 2800631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 317 - 359
Target Start/End: Complemental strand, 13867729 - 13867687
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttcat 359  Q
    ||||||||||| ||||||||| |||||||||||||||||||||    
T  13867729 cttaattactcttttggtcccctaacttattttttggtttcat 13867687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 317 - 354
Target Start/End: Original strand, 12061626 - 12061663
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggt 354  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  12061626 cttaattactcttttggtcccttaacttattttttggt 12061663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 318 - 355
Target Start/End: Complemental strand, 23090660 - 23090623
Alignment:
Q  318 ttaattactcatttggtcccttaacttattttttggtt 355  Q
    |||||||||| |||||||||||||||||||||||||||    
T  23090660 ttaattactcttttggtcccttaacttattttttggtt 23090623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 317 - 357
Target Start/End: Complemental strand, 2800877 - 2800837
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||| |||||||||||||||||||||||| ||||    
T  2800877 cttaattactcttttggtcccttaacttattttttgatttc 2800837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 317 - 357
Target Start/End: Original strand, 6098401 - 6098441
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||| ||||||||||||| |||||||||||||||    
T  6098401 cttaattactcttttggtcccttaatttattttttggtttc 6098441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 317 - 357
Target Start/End: Complemental strand, 12062062 - 12062022
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||| |||||||| ||||||||||||||||||||    
T  12062062 cttaattactcttttggtcctttaacttattttttggtttc 12062022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 317 - 357
Target Start/End: Original strand, 17933826 - 17933866
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||| |||||||||||||||||| ||||||||||    
T  17933826 cttaattactcgtttggtcccttaacttatattttggtttc 17933866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 317 - 357
Target Start/End: Complemental strand, 19794831 - 19794791
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    |||||| |||| |||||||||||||||||||||||||||||    
T  19794831 cttaataactcttttggtcccttaacttattttttggtttc 19794791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 317 - 357
Target Start/End: Original strand, 30267393 - 30267433
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||| |||||||||||||||||||||||| ||||    
T  30267393 cttaattactcttttggtcccttaacttattttttgatttc 30267433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 317 - 357
Target Start/End: Complemental strand, 30267827 - 30267787
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||| |||| ||||||||||||||||||||||||    
T  30267827 cttaattactcttttgatcccttaacttattttttggtttc 30267787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 317 - 357
Target Start/End: Original strand, 51890982 - 51891022
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||| |||| ||||||||||||||||||||||||    
T  51890982 cttaattactcttttgatcccttaacttattttttggtttc 51891022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 352
Target Start/End: Original strand, 53204525 - 53204560
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttg 352  Q
    ||||||||||| ||||||||||||||||||||||||    
T  53204525 cttaattactcttttggtcccttaacttattttttg 53204560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 329 - 359
Target Start/End: Original strand, 1364432 - 1364462
Alignment:
Q  329 tttggtcccttaacttattttttggtttcat 359  Q
    |||||||||||||||||||||||||||||||    
T  1364432 tttggtcccttaacttattttttggtttcat 1364462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 329 - 359
Target Start/End: Complemental strand, 6951038 - 6951008
Alignment:
Q  329 tttggtcccttaacttattttttggtttcat 359  Q
    |||||||||||||||||||||||||||||||    
T  6951038 tttggtcccttaacttattttttggtttcat 6951008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 329 - 359
Target Start/End: Original strand, 17933958 - 17933988
Alignment:
Q  329 tttggtcccttaacttattttttggtttcat 359  Q
    |||||||||||||||||||||||||||||||    
T  17933958 tttggtcccttaacttattttttggtttcat 17933988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 329 - 359
Target Start/End: Original strand, 19794560 - 19794590
Alignment:
Q  329 tttggtcccttaacttattttttggtttcat 359  Q
    |||||||||||||||||||||||||||||||    
T  19794560 tttggtcccttaacttattttttggtttcat 19794590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 329 - 359
Target Start/End: Complemental strand, 25629736 - 25629706
Alignment:
Q  329 tttggtcccttaacttattttttggtttcat 359  Q
    |||||||||||||||||||||||||||||||    
T  25629736 tttggtcccttaacttattttttggtttcat 25629706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 329 - 359
Target Start/End: Original strand, 28004400 - 28004430
Alignment:
Q  329 tttggtcccttaacttattttttggtttcat 359  Q
    |||||||||||||||||||||||||||||||    
T  28004400 tttggtcccttaacttattttttggtttcat 28004430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 318 - 359
Target Start/End: Complemental strand, 1364643 - 1364602
Alignment:
Q  318 ttaattactcatttggtcccttaacttattttttggtttcat 359  Q
    |||||||||| ||| ||||||||| |||||||||||||||||    
T  1364643 ttaattactcttttagtcccttaatttattttttggtttcat 1364602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 317 - 357
Target Start/End: Original strand, 1069834 - 1069874
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||| |||| |||||||| |||||||||||||||    
T  1069834 cttaattactcttttgatcccttaaattattttttggtttc 1069874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 357
Target Start/End: Original strand, 1069997 - 1070025
Alignment:
Q  329 tttggtcccttaacttattttttggtttc 357  Q
    |||||||||||||||||||||||||||||    
T  1069997 tttggtcccttaacttattttttggtttc 1070025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 317 - 357
Target Start/End: Original strand, 1364269 - 1364309
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||| ||||||||| ||||||||||||| |||||    
T  1364269 cttaattactcttttggtcccataacttattttttagtttc 1364309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 357
Target Start/End: Complemental strand, 6951069 - 6951041
Alignment:
Q  329 tttggtcccttaacttattttttggtttc 357  Q
    |||||||||||||||||||||||||||||    
T  6951069 tttggtcccttaacttattttttggtttc 6951041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 317 - 357
Target Start/End: Original strand, 10817514 - 10817554
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    |||||||||||||||||||  |||||||||||||| |||||    
T  10817514 cttaattactcatttggtctgttaacttattttttagtttc 10817554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 357
Target Start/End: Complemental strand, 10817755 - 10817727
Alignment:
Q  329 tttggtcccttaacttattttttggtttc 357  Q
    |||||||||||||||||||||||||||||    
T  10817755 tttggtcccttaacttattttttggtttc 10817727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 357
Target Start/End: Original strand, 18024730 - 18024758
Alignment:
Q  329 tttggtcccttaacttattttttggtttc 357  Q
    |||||||||||||||||||||||||||||    
T  18024730 tttggtcccttaacttattttttggtttc 18024758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 357
Target Start/End: Original strand, 18024761 - 18024789
Alignment:
Q  329 tttggtcccttaacttattttttggtttc 357  Q
    |||||||||||||||||||||||||||||    
T  18024761 tttggtcccttaacttattttttggtttc 18024789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 357
Target Start/End: Complemental strand, 18024901 - 18024873
Alignment:
Q  329 tttggtcccttaacttattttttggtttc 357  Q
    |||||||||||||||||||||||||||||    
T  18024901 tttggtcccttaacttattttttggtttc 18024873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 317 - 357
Target Start/End: Original strand, 18270629 - 18270669
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||| |||||| |||||| |||||||||||||||    
T  18270629 cttaattactcttttggttccttaatttattttttggtttc 18270669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 357
Target Start/End: Complemental strand, 18271021 - 18270993
Alignment:
Q  329 tttggtcccttaacttattttttggtttc 357  Q
    |||||||||||||||||||||||||||||    
T  18271021 tttggtcccttaacttattttttggtttc 18270993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 317 - 357
Target Start/End: Original strand, 22976983 - 22977023
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||  |||||||| ||||||||||||||||||||    
T  22976983 cttaattacttttttggtcctttaacttattttttggtttc 22977023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 357
Target Start/End: Original strand, 25629596 - 25629624
Alignment:
Q  329 tttggtcccttaacttattttttggtttc 357  Q
    |||||||||||||||||||||||||||||    
T  25629596 tttggtcccttaacttattttttggtttc 25629624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 317 - 357
Target Start/End: Original strand, 28033045 - 28033085
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||| ||||||||||||| ||| |||||||||||    
T  28033045 cttaattactcttttggtcccttaatttaatttttggtttc 28033085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 317 - 357
Target Start/End: Complemental strand, 28033480 - 28033440
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||| ||||||| ||||||||||||||| |||||    
T  28033480 cttaattactcttttggtctcttaacttatttttttgtttc 28033440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 357
Target Start/End: Original strand, 38771371 - 38771399
Alignment:
Q  329 tttggtcccttaacttattttttggtttc 357  Q
    |||||||||||||||||||||||||||||    
T  38771371 tttggtcccttaacttattttttggtttc 38771399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 357
Target Start/End: Original strand, 40941555 - 40941583
Alignment:
Q  329 tttggtcccttaacttattttttggtttc 357  Q
    |||||||||||||||||||||||||||||    
T  40941555 tttggtcccttaacttattttttggtttc 40941583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 317 - 357
Target Start/End: Original strand, 42213153 - 42213193
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||| || |||||||||| |||||||||||||||    
T  42213153 cttaattactctttcggtcccttaatttattttttggtttc 42213193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 357
Target Start/End: Original strand, 42213285 - 42213313
Alignment:
Q  329 tttggtcccttaacttattttttggtttc 357  Q
    |||||||||||||||||||||||||||||    
T  42213285 tttggtcccttaacttattttttggtttc 42213313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 317 - 357
Target Start/End: Complemental strand, 42213588 - 42213548
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||  ||| |||||||||||||||||||||||||    
T  42213588 cttaattacttttttcgtcccttaacttattttttggtttc 42213548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 357
Target Start/End: Original strand, 42592565 - 42592593
Alignment:
Q  329 tttggtcccttaacttattttttggtttc 357  Q
    |||||||||||||||||||||||||||||    
T  42592565 tttggtcccttaacttattttttggtttc 42592593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 357
Target Start/End: Original strand, 42592596 - 42592624
Alignment:
Q  329 tttggtcccttaacttattttttggtttc 357  Q
    |||||||||||||||||||||||||||||    
T  42592596 tttggtcccttaacttattttttggtttc 42592624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 317 - 357
Target Start/End: Complemental strand, 53204897 - 53204857
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||| |||| |||||||||||||||||| |||||    
T  53204897 cttaattactcttttgctcccttaacttattttttagtttc 53204857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 55)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 317 - 359
Target Start/End: Original strand, 39110074 - 39110116
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttcat 359  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  39110074 cttaattactcatttggtcccttaacttattttttggtttcat 39110116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 317 - 357
Target Start/End: Original strand, 36099295 - 36099335
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  36099295 cttaattactcatttggtcccttaacttattttttggtttc 36099335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 317 - 357
Target Start/End: Original strand, 45001055 - 45001095
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  45001055 cttaattactcatttggtcccttaacttattttttggtttc 45001095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 317 - 357
Target Start/End: Original strand, 7031807 - 7031847
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  7031807 cttaattactcttttggtcccttaacttattttttggtttc 7031847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 317 - 357
Target Start/End: Original strand, 7182352 - 7182392
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    |||||||||||||||||||| ||||||||||||||||||||    
T  7182352 cttaattactcatttggtccattaacttattttttggtttc 7182392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 317 - 357
Target Start/End: Complemental strand, 7182755 - 7182715
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  7182755 cttaattactcgtttggtcccttaacttattttttggtttc 7182715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 317 - 357
Target Start/End: Original strand, 15129645 - 15129685
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  15129645 cttaattactcttttggtcccttaacttattttttggtttc 15129685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 317 - 357
Target Start/End: Complemental strand, 18905066 - 18905026
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  18905066 cttaattactcttttggtcccttaacttattttttggtttc 18905026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 317 - 357
Target Start/End: Original strand, 27516161 - 27516201
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  27516161 cttaattactcttttggtcccttaacttattttttggtttc 27516201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 317 - 357
Target Start/End: Complemental strand, 27516597 - 27516557
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  27516597 cttaattactcttttggtcccttaacttattttttggtttc 27516557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 317 - 357
Target Start/End: Original strand, 30785705 - 30785745
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  30785705 cttaattactcttttggtcccttaacttattttttggtttc 30785745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 317 - 357
Target Start/End: Complemental strand, 31309823 - 31309783
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  31309823 cttaattactcttttggtcccttaacttattttttggtttc 31309783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 317 - 357
Target Start/End: Complemental strand, 35251933 - 35251893
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  35251933 cttaattactcttttggtcccttaacttattttttggtttc 35251893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 317 - 357
Target Start/End: Complemental strand, 39110480 - 39110440
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    |||||||||||||||||||| ||||||||||||||||||||    
T  39110480 cttaattactcatttggtccattaacttattttttggtttc 39110440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 317 - 356
Target Start/End: Complemental strand, 23461474 - 23461435
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggttt 356  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  23461474 cttaattactcttttggtcccttaacttattttttggttt 23461435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 318 - 357
Target Start/End: Complemental strand, 28958170 - 28958131
Alignment:
Q  318 ttaattactcatttggtcccttaacttattttttggtttc 357  Q
    |||||||||| |||||||||||||||||||||||||||||    
T  28958170 ttaattactcttttggtcccttaacttattttttggtttc 28958131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 317 - 354
Target Start/End: Complemental strand, 38578238 - 38578201
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggt 354  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  38578238 cttaattactcttttggtcccttaacttattttttggt 38578201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 317 - 357
Target Start/End: Original strand, 6645523 - 6645563
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||| ||||||| |||||||||||||||||||||    
T  6645523 cttaattactcttttggtctcttaacttattttttggtttc 6645563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 317 - 357
Target Start/End: Complemental strand, 7032212 - 7032172
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||| ||||||||||||||||||||||| |||||    
T  7032212 cttaattactcttttggtcccttaacttattttttagtttc 7032172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 316 - 356
Target Start/End: Complemental strand, 10414395 - 10414355
Alignment:
Q  316 tcttaattactcatttggtcccttaacttattttttggttt 356  Q
    |||||||||||| |||||||| |||||||||||||||||||    
T  10414395 tcttaattactcttttggtcctttaacttattttttggttt 10414355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 317 - 357
Target Start/End: Complemental strand, 15130110 - 15130070
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||| |||| ||||||||||||||||||||||||    
T  15130110 cttaattactcttttgatcccttaacttattttttggtttc 15130070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 317 - 357
Target Start/End: Original strand, 18904601 - 18904641
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||| ||||||||||||||||||||||| |||||    
T  18904601 cttaattactcttttggtcccttaacttatttttttgtttc 18904641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 317 - 357
Target Start/End: Original strand, 26892466 - 26892506
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||| ||| |||||||||||||||||||||||||||||    
T  26892466 cttaattgctcttttggtcccttaacttattttttggtttc 26892506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 317 - 357
Target Start/End: Original strand, 26897905 - 26897945
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||| ||| |||||||||||||||||||||||||||||    
T  26897905 cttaattgctcttttggtcccttaacttattttttggtttc 26897945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 317 - 357
Target Start/End: Original strand, 28957797 - 28957837
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||| ||||||||||||| |||||||||||||||    
T  28957797 cttaattactcttttggtcccttaatttattttttggtttc 28957837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 317 - 357
Target Start/End: Complemental strand, 31309460 - 31309420
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||| ||||||||||||| |||||||||||||||    
T  31309460 cttaattactcgtttggtcccttaagttattttttggtttc 31309420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 317 - 357
Target Start/End: Original strand, 35251498 - 35251538
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||| ||||||||||||||||| |||||||||||    
T  35251498 cttaattactcttttggtcccttaacttaatttttggtttc 35251538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 317 - 353
Target Start/End: Complemental strand, 35589222 - 35589186
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttgg 353  Q
    ||||||||||| |||||||||||||||||||||||||    
T  35589222 cttaattactcttttggtcccttaacttattttttgg 35589186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 318 - 357
Target Start/End: Complemental strand, 26892900 - 26892861
Alignment:
Q  318 ttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||| || |||||||||||||||||||||||||||||    
T  26892900 ttaattattcttttggtcccttaacttattttttggtttc 26892861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 318 - 357
Target Start/End: Complemental strand, 26898339 - 26898300
Alignment:
Q  318 ttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||| || |||||||||||||||||||||||||||||    
T  26898339 ttaattattcttttggtcccttaacttattttttggtttc 26898300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 318 - 357
Target Start/End: Original strand, 38577833 - 38577872
Alignment:
Q  318 ttaattactcatttggtcccttaacttattttttggtttc 357  Q
    |||||||||| |||||||| ||||||||||||||||||||    
T  38577833 ttaattactcttttggtcctttaacttattttttggtttc 38577872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 329 - 359
Target Start/End: Complemental strand, 6645795 - 6645765
Alignment:
Q  329 tttggtcccttaacttattttttggtttcat 359  Q
    |||||||||||||||||||||||||||||||    
T  6645795 tttggtcccttaacttattttttggtttcat 6645765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 329 - 359
Target Start/End: Original strand, 7182484 - 7182514
Alignment:
Q  329 tttggtcccttaacttattttttggtttcat 359  Q
    |||||||||||||||||||||||||||||||    
T  7182484 tttggtcccttaacttattttttggtttcat 7182514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 329 - 359
Target Start/End: Complemental strand, 26892738 - 26892708
Alignment:
Q  329 tttggtcccttaacttattttttggtttcat 359  Q
    |||||||||||||||||||||||||||||||    
T  26892738 tttggtcccttaacttattttttggtttcat 26892708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 329 - 359
Target Start/End: Complemental strand, 26898177 - 26898147
Alignment:
Q  329 tttggtcccttaacttattttttggtttcat 359  Q
    |||||||||||||||||||||||||||||||    
T  26898177 tttggtcccttaacttattttttggtttcat 26898147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 329 - 359
Target Start/End: Original strand, 30785868 - 30785898
Alignment:
Q  329 tttggtcccttaacttattttttggtttcat 359  Q
    |||||||||||||||||||||||||||||||    
T  30785868 tttggtcccttaacttattttttggtttcat 30785898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 329 - 359
Target Start/End: Complemental strand, 31309629 - 31309599
Alignment:
Q  329 tttggtcccttaacttattttttggtttcat 359  Q
    |||||||||||||||||||||||||||||||    
T  31309629 tttggtcccttaacttattttttggtttcat 31309599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 329 - 359
Target Start/End: Complemental strand, 35251770 - 35251740
Alignment:
Q  329 tttggtcccttaacttattttttggtttcat 359  Q
    |||||||||||||||||||||||||||||||    
T  35251770 tttggtcccttaacttattttttggtttcat 35251740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 329 - 359
Target Start/End: Original strand, 38577997 - 38578027
Alignment:
Q  329 tttggtcccttaacttattttttggtttcat 359  Q
    |||||||||||||||||||||||||||||||    
T  38577997 tttggtcccttaacttattttttggtttcat 38578027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 317 - 357
Target Start/End: Complemental strand, 6645927 - 6645887
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||| | |||| ||||||||||||||||||||||||    
T  6645927 cttaattacacttttgatcccttaacttattttttggtttc 6645887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 357
Target Start/End: Original strand, 7031939 - 7031967
Alignment:
Q  329 tttggtcccttaacttattttttggtttc 357  Q
    |||||||||||||||||||||||||||||    
T  7031939 tttggtcccttaacttattttttggtttc 7031967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 357
Target Start/End: Complemental strand, 7032109 - 7032081
Alignment:
Q  329 tttggtcccttaacttattttttggtttc 357  Q
    |||||||||||||||||||||||||||||    
T  7032109 tttggtcccttaacttattttttggtttc 7032081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 317 - 357
Target Start/End: Original strand, 10413996 - 10414036
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||  ||||||||||||| |||||||||||||||    
T  10413996 cttaattactattttggtcccttaatttattttttggtttc 10414036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 357
Target Start/End: Complemental strand, 10414262 - 10414234
Alignment:
Q  329 tttggtcccttaacttattttttggtttc 357  Q
    |||||||||||||||||||||||||||||    
T  10414262 tttggtcccttaacttattttttggtttc 10414234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 357
Target Start/End: Original strand, 15129808 - 15129836
Alignment:
Q  329 tttggtcccttaacttattttttggtttc 357  Q
    |||||||||||||||||||||||||||||    
T  15129808 tttggtcccttaacttattttttggtttc 15129836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 357
Target Start/End: Complemental strand, 15129978 - 15129950
Alignment:
Q  329 tttggtcccttaacttattttttggtttc 357  Q
    |||||||||||||||||||||||||||||    
T  15129978 tttggtcccttaacttattttttggtttc 15129950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 357
Target Start/End: Original strand, 18904764 - 18904792
Alignment:
Q  329 tttggtcccttaacttattttttggtttc 357  Q
    |||||||||||||||||||||||||||||    
T  18904764 tttggtcccttaacttattttttggtttc 18904792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 357
Target Start/End: Complemental strand, 18904934 - 18904906
Alignment:
Q  329 tttggtcccttaacttattttttggtttc 357  Q
    |||||||||||||||||||||||||||||    
T  18904934 tttggtcccttaacttattttttggtttc 18904906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 357
Target Start/End: Complemental strand, 26892769 - 26892741
Alignment:
Q  329 tttggtcccttaacttattttttggtttc 357  Q
    |||||||||||||||||||||||||||||    
T  26892769 tttggtcccttaacttattttttggtttc 26892741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 357
Target Start/End: Complemental strand, 31309660 - 31309632
Alignment:
Q  329 tttggtcccttaacttattttttggtttc 357  Q
    |||||||||||||||||||||||||||||    
T  31309660 tttggtcccttaacttattttttggtttc 31309632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 357
Target Start/End: Original strand, 36099458 - 36099486
Alignment:
Q  329 tttggtcccttaacttattttttggtttc 357  Q
    |||||||||||||||||||||||||||||    
T  36099458 tttggtcccttaacttattttttggtttc 36099486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 357
Target Start/End: Complemental strand, 36099628 - 36099600
Alignment:
Q  329 tttggtcccttaacttattttttggtttc 357  Q
    |||||||||||||||||||||||||||||    
T  36099628 tttggtcccttaacttattttttggtttc 36099600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 357
Target Start/End: Original strand, 39110146 - 39110174
Alignment:
Q  329 tttggtcccttaacttattttttggtttc 357  Q
    |||||||||||||||||||||||||||||    
T  39110146 tttggtcccttaacttattttttggtttc 39110174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 357
Target Start/End: Original strand, 39110177 - 39110205
Alignment:
Q  329 tttggtcccttaacttattttttggtttc 357  Q
    |||||||||||||||||||||||||||||    
T  39110177 tttggtcccttaacttattttttggtttc 39110205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 357
Target Start/End: Complemental strand, 39110348 - 39110320
Alignment:
Q  329 tttggtcccttaacttattttttggtttc 357  Q
    |||||||||||||||||||||||||||||    
T  39110348 tttggtcccttaacttattttttggtttc 39110320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 74)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 317 - 357
Target Start/End: Complemental strand, 10398754 - 10398714
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  10398754 cttaattactcatttggtcccttaacttattttttggtttc 10398714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 318 - 356
Target Start/End: Original strand, 4881083 - 4881121
Alignment:
Q  318 ttaattactcatttggtcccttaacttattttttggttt 356  Q
    |||||||||||||||||||||||||||||||||||||||    
T  4881083 ttaattactcatttggtcccttaacttattttttggttt 4881121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 317 - 357
Target Start/End: Complemental strand, 4326030 - 4325990
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  4326030 cttaattactcttttggtcccttaacttattttttggtttc 4325990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 317 - 357
Target Start/End: Complemental strand, 5822081 - 5822041
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  5822081 cttaattactcttttggtcccttaacttattttttggtttc 5822041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 317 - 357
Target Start/End: Complemental strand, 5876892 - 5876852
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  5876892 cttaattactcttttggtcccttaacttattttttggtttc 5876852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 317 - 357
Target Start/End: Complemental strand, 11919702 - 11919662
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  11919702 cttaattactcttttggtcccttaacttattttttggtttc 11919662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 317 - 357
Target Start/End: Original strand, 12823268 - 12823308
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  12823268 cttaattactcttttggtcccttaacttattttttggtttc 12823308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 317 - 357
Target Start/End: Original strand, 14054790 - 14054830
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  14054790 cttaattactcttttggtcccttaacttattttttggtttc 14054830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 317 - 357
Target Start/End: Complemental strand, 21524713 - 21524673
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  21524713 cttaattactcttttggtcccttaacttattttttggtttc 21524673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 317 - 357
Target Start/End: Complemental strand, 23152736 - 23152696
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  23152736 cttaattactcttttggtcccttaacttattttttggtttc 23152696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 317 - 357
Target Start/End: Original strand, 29802162 - 29802202
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  29802162 cttaattactcttttggtcccttaacttattttttggtttc 29802202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 317 - 357
Target Start/End: Complemental strand, 29802627 - 29802587
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  29802627 cttaattactcttttggtcccttaacttattttttggtttc 29802587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 317 - 357
Target Start/End: Complemental strand, 41387608 - 41387568
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  41387608 cttaattactcttttggtcccttaacttattttttggtttc 41387568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 317 - 357
Target Start/End: Original strand, 45467439 - 45467479
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  45467439 cttaattactcttttggtcccttaacttattttttggtttc 45467479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 317 - 356
Target Start/End: Complemental strand, 45467865 - 45467826
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggttt 356  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  45467865 cttaattactcttttggtcccttaacttattttttggttt 45467826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 317 - 359
Target Start/End: Original strand, 9237314 - 9237356
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttcat 359  Q
    ||||||||||| ||||||||||||| |||||||||||||||||    
T  9237314 cttaattactcttttggtcccttaatttattttttggtttcat 9237356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 317 - 355
Target Start/End: Complemental strand, 9237812 - 9237774
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtt 355  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  9237812 cttaattattcatttggtcccttaacttattttttggtt 9237774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 312 - 357
Target Start/End: Complemental strand, 4881522 - 4881477
Alignment:
Q  312 cttatcttaattactcatttggtcccttaacttattttttggtttc 357  Q
    |||| |||||||| |||||||||||||||| |||||||||||||||    
T  4881522 cttagcttaattattcatttggtcccttaatttattttttggtttc 4881477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 320 - 357
Target Start/End: Original strand, 12849969 - 12850006
Alignment:
Q  320 aattactcatttggtcccttaacttattttttggtttc 357  Q
    |||||||| |||||||||||||||||||||||||||||    
T  12849969 aattactcttttggtcccttaacttattttttggtttc 12850006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 316 - 357
Target Start/End: Complemental strand, 12850401 - 12850360
Alignment:
Q  316 tcttaattactcatttggtcccttaacttattttttggtttc 357  Q
    |||||||||||| ||||||||||||||||||||||| |||||    
T  12850401 tcttaattactcttttggtcccttaacttattttttagtttc 12850360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 317 - 357
Target Start/End: Complemental strand, 3318094 - 3318054
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||| ||||||||||||| |||||||||||||||    
T  3318094 cttaattactcttttggtcccttaatttattttttggtttc 3318054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 317 - 357
Target Start/End: Original strand, 4325596 - 4325636
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||| ||||||||||||||||||||||| |||||    
T  4325596 cttaattactcttttggtcccttaacttattttttagtttc 4325636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 317 - 357
Target Start/End: Original strand, 11901127 - 11901167
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||| |||||||||| ||||||||||||||||||    
T  11901127 cttaattactcttttggtccctcaacttattttttggtttc 11901167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 317 - 357
Target Start/End: Complemental strand, 12823671 - 12823631
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||| ||||||||||||||||||||||| |||||    
T  12823671 cttaattactcttttggtcccttaacttatttttttgtttc 12823631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 317 - 357
Target Start/End: Complemental strand, 15304388 - 15304348
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||| ||||||||| |||||||||||||||||||    
T  15304388 cttaattactcttttggtcccctaacttattttttggtttc 15304348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 317 - 357
Target Start/End: Complemental strand, 15484757 - 15484717
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||| ||||||||| |||||||||||||||||||    
T  15484757 cttaattactcttttggtcccctaacttattttttggtttc 15484717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 317 - 357
Target Start/End: Original strand, 21524278 - 21524318
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||| ||||||||| |||||||||||||||||||    
T  21524278 cttaattactcttttggtcccataacttattttttggtttc 21524318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 318 - 357
Target Start/End: Original strand, 3317542 - 3317581
Alignment:
Q  318 ttaattactcatttggtcccttaacttattttttggtttc 357  Q
    |||||||||| ||||||||||||| |||||||||||||||    
T  3317542 ttaattactcttttggtcccttaatttattttttggtttc 3317581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 318 - 357
Target Start/End: Complemental strand, 6513603 - 6513564
Alignment:
Q  318 ttaattactcatttggtcccttaacttattttttggtttc 357  Q
    |||||||||| |||||||||||||||||||||||| ||||    
T  6513603 ttaattactcttttggtcccttaacttattttttgatttc 6513564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 356
Target Start/End: Complemental strand, 11901551 - 11901512
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggttt 356  Q
    ||||||||||  ||||||||||||||||||||||||||||    
T  11901551 cttaattacttttttggtcccttaacttattttttggttt 11901512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 329 - 359
Target Start/End: Original strand, 162447 - 162477
Alignment:
Q  329 tttggtcccttaacttattttttggtttcat 359  Q
    |||||||||||||||||||||||||||||||    
T  162447 tttggtcccttaacttattttttggtttcat 162477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 329 - 359
Target Start/End: Original strand, 1259779 - 1259809
Alignment:
Q  329 tttggtcccttaacttattttttggtttcat 359  Q
    |||||||||||||||||||||||||||||||    
T  1259779 tttggtcccttaacttattttttggtttcat 1259809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 329 - 359
Target Start/End: Original strand, 4325728 - 4325758
Alignment:
Q  329 tttggtcccttaacttattttttggtttcat 359  Q
    |||||||||||||||||||||||||||||||    
T  4325728 tttggtcccttaacttattttttggtttcat 4325758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 329 - 359
Target Start/End: Original strand, 9237509 - 9237539
Alignment:
Q  329 tttggtcccttaacttattttttggtttcat 359  Q
    |||||||||||||||||||||||||||||||    
T  9237509 tttggtcccttaacttattttttggtttcat 9237539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 329 - 359
Target Start/End: Complemental strand, 15304256 - 15304226
Alignment:
Q  329 tttggtcccttaacttattttttggtttcat 359  Q
    |||||||||||||||||||||||||||||||    
T  15304256 tttggtcccttaacttattttttggtttcat 15304226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 329 - 359
Target Start/End: Complemental strand, 15484625 - 15484595
Alignment:
Q  329 tttggtcccttaacttattttttggtttcat 359  Q
    |||||||||||||||||||||||||||||||    
T  15484625 tttggtcccttaacttattttttggtttcat 15484595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 317 - 357
Target Start/End: Original strand, 162283 - 162324
Alignment:
Q  317 cttaattactcattt-ggtcccttaacttattttttggtttc 357  Q
    ||||||||||| ||| ||||||||||||||||||||||||||    
T  162283 cttaattactctttttggtcccttaacttattttttggtttc 162324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 323 - 356
Target Start/End: Original strand, 41387148 - 41387181
Alignment:
Q  323 tactcatttggtcccttaacttattttttggttt 356  Q
    ||||| ||||||||||||||||||||||||||||    
T  41387148 tactcttttggtcccttaacttattttttggttt 41387181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 317 - 357
Target Start/End: Complemental strand, 162719 - 162679
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||| || ||||||||||||||||||| ||||||    
T  162719 cttaattactctttgggtcccttaacttatttttaggtttc 162679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 317 - 357
Target Start/End: Complemental strand, 2916890 - 2916850
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||  ||||||||||||||||||||||| |||||    
T  2916890 cttaattacttttttggtcccttaacttattttttagtttc 2916850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 357
Target Start/End: Original strand, 3317673 - 3317701
Alignment:
Q  329 tttggtcccttaacttattttttggtttc 357  Q
    |||||||||||||||||||||||||||||    
T  3317673 tttggtcccttaacttattttttggtttc 3317701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 357
Target Start/End: Original strand, 3317793 - 3317821
Alignment:
Q  329 tttggtcccttaacttattttttggtttc 357  Q
    |||||||||||||||||||||||||||||    
T  3317793 tttggtcccttaacttattttttggtttc 3317821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 357
Target Start/End: Complemental strand, 4325958 - 4325930
Alignment:
Q  329 tttggtcccttaacttattttttggtttc 357  Q
    |||||||||||||||||||||||||||||    
T  4325958 tttggtcccttaacttattttttggtttc 4325930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 357
Target Start/End: Original strand, 4881245 - 4881273
Alignment:
Q  329 tttggtcccttaacttattttttggtttc 357  Q
    |||||||||||||||||||||||||||||    
T  4881245 tttggtcccttaacttattttttggtttc 4881273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 317 - 357
Target Start/End: Original strand, 5821676 - 5821716
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    |||||||||||  |||||||||||||||||||||| |||||    
T  5821676 cttaattactctattggtcccttaacttattttttagtttc 5821716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 357
Target Start/End: Original strand, 5821808 - 5821836
Alignment:
Q  329 tttggtcccttaacttattttttggtttc 357  Q
    |||||||||||||||||||||||||||||    
T  5821808 tttggtcccttaacttattttttggtttc 5821836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 357
Target Start/End: Complemental strand, 5821978 - 5821950
Alignment:
Q  329 tttggtcccttaacttattttttggtttc 357  Q
    |||||||||||||||||||||||||||||    
T  5821978 tttggtcccttaacttattttttggtttc 5821950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 357
Target Start/End: Original strand, 5876536 - 5876564
Alignment:
Q  329 tttggtcccttaacttattttttggtttc 357  Q
    |||||||||||||||||||||||||||||    
T  5876536 tttggtcccttaacttattttttggtttc 5876564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 357
Target Start/End: Complemental strand, 5876708 - 5876680
Alignment:
Q  329 tttggtcccttaacttattttttggtttc 357  Q
    |||||||||||||||||||||||||||||    
T  5876708 tttggtcccttaacttattttttggtttc 5876680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 357
Target Start/End: Complemental strand, 5876739 - 5876711
Alignment:
Q  329 tttggtcccttaacttattttttggtttc 357  Q
    |||||||||||||||||||||||||||||    
T  5876739 tttggtcccttaacttattttttggtttc 5876711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 357
Target Start/End: Original strand, 5881572 - 5881600
Alignment:
Q  329 tttggtcccttaacttattttttggtttc 357  Q
    |||||||||||||||||||||||||||||    
T  5881572 tttggtcccttaacttattttttggtttc 5881600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 357
Target Start/End: Original strand, 5881603 - 5881631
Alignment:
Q  329 tttggtcccttaacttattttttggtttc 357  Q
    |||||||||||||||||||||||||||||    
T  5881603 tttggtcccttaacttattttttggtttc 5881631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 357
Target Start/End: Complemental strand, 6513441 - 6513413
Alignment:
Q  329 tttggtcccttaacttattttttggtttc 357  Q
    |||||||||||||||||||||||||||||    
T  6513441 tttggtcccttaacttattttttggtttc 6513413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 357
Target Start/End: Original strand, 9237478 - 9237506
Alignment:
Q  329 tttggtcccttaacttattttttggtttc 357  Q
    |||||||||||||||||||||||||||||    
T  9237478 tttggtcccttaacttattttttggtttc 9237506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 357
Target Start/End: Complemental strand, 9237649 - 9237621
Alignment:
Q  329 tttggtcccttaacttattttttggtttc 357  Q
    |||||||||||||||||||||||||||||    
T  9237649 tttggtcccttaacttattttttggtttc 9237621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 357
Target Start/End: Original strand, 10397794 - 10397822
Alignment:
Q  329 tttggtcccttaacttattttttggtttc 357  Q
    |||||||||||||||||||||||||||||    
T  10397794 tttggtcccttaacttattttttggtttc 10397822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 357
Target Start/End: Complemental strand, 10397933 - 10397905
Alignment:
Q  329 tttggtcccttaacttattttttggtttc 357  Q
    |||||||||||||||||||||||||||||    
T  10397933 tttggtcccttaacttattttttggtttc 10397905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 357
Target Start/End: Original strand, 10398483 - 10398511
Alignment:
Q  329 tttggtcccttaacttattttttggtttc 357  Q
    |||||||||||||||||||||||||||||    
T  10398483 tttggtcccttaacttattttttggtttc 10398511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 357
Target Start/End: Complemental strand, 10398622 - 10398594
Alignment:
Q  329 tttggtcccttaacttattttttggtttc 357  Q
    |||||||||||||||||||||||||||||    
T  10398622 tttggtcccttaacttattttttggtttc 10398594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 357
Target Start/End: Complemental strand, 11901479 - 11901451
Alignment:
Q  329 tttggtcccttaacttattttttggtttc 357  Q
    |||||||||||||||||||||||||||||    
T  11901479 tttggtcccttaacttattttttggtttc 11901451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 357
Target Start/End: Original strand, 12823371 - 12823399
Alignment:
Q  329 tttggtcccttaacttattttttggtttc 357  Q
    |||||||||||||||||||||||||||||    
T  12823371 tttggtcccttaacttattttttggtttc 12823399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 317 - 357
Target Start/End: Complemental strand, 14055165 - 14055125
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||| |||||||| |||||||||||||| |||||    
T  14055165 cttaattactcttttggtcctttaacttattttttagtttc 14055125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 357
Target Start/End: Complemental strand, 15304225 - 15304197
Alignment:
Q  329 tttggtcccttaacttattttttggtttc 357  Q
    |||||||||||||||||||||||||||||    
T  15304225 tttggtcccttaacttattttttggtttc 15304197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 357
Target Start/End: Complemental strand, 15484594 - 15484566
Alignment:
Q  329 tttggtcccttaacttattttttggtttc 357  Q
    |||||||||||||||||||||||||||||    
T  15484594 tttggtcccttaacttattttttggtttc 15484566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 317 - 357
Target Start/End: Original strand, 23152275 - 23152315
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||| |||||||||||||  ||||||||||||||    
T  23152275 cttaattactcttttggtcccttaatatattttttggtttc 23152315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 357
Target Start/End: Complemental strand, 23152578 - 23152550
Alignment:
Q  329 tttggtcccttaacttattttttggtttc 357  Q
    |||||||||||||||||||||||||||||    
T  23152578 tttggtcccttaacttattttttggtttc 23152550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 357
Target Start/End: Complemental strand, 23152609 - 23152581
Alignment:
Q  329 tttggtcccttaacttattttttggtttc 357  Q
    |||||||||||||||||||||||||||||    
T  23152609 tttggtcccttaacttattttttggtttc 23152581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 357
Target Start/End: Original strand, 29802325 - 29802353
Alignment:
Q  329 tttggtcccttaacttattttttggtttc 357  Q
    |||||||||||||||||||||||||||||    
T  29802325 tttggtcccttaacttattttttggtttc 29802353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 357
Target Start/End: Original strand, 35103353 - 35103381
Alignment:
Q  329 tttggtcccttaacttattttttggtttc 357  Q
    |||||||||||||||||||||||||||||    
T  35103353 tttggtcccttaacttattttttggtttc 35103381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 317 - 357
Target Start/End: Complemental strand, 35103656 - 35103616
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||| |||| |||||||||||||||||| |||||    
T  35103656 cttaattactcttttgatcccttaacttattttttagtttc 35103616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 317 - 357
Target Start/End: Original strand, 35181720 - 35181760
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||| |||||| |||||| |||||||||||||||    
T  35181720 cttaattactcttttggttccttaatttattttttggtttc 35181760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 357
Target Start/End: Complemental strand, 41387445 - 41387417
Alignment:
Q  329 tttggtcccttaacttattttttggtttc 357  Q
    |||||||||||||||||||||||||||||    
T  41387445 tttggtcccttaacttattttttggtttc 41387417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 357
Target Start/End: Complemental strand, 41387476 - 41387448
Alignment:
Q  329 tttggtcccttaacttattttttggtttc 357  Q
    |||||||||||||||||||||||||||||    
T  41387476 tttggtcccttaacttattttttggtttc 41387448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 357
Target Start/End: Original strand, 45467563 - 45467591
Alignment:
Q  329 tttggtcccttaacttattttttggtttc 357  Q
    |||||||||||||||||||||||||||||    
T  45467563 tttggtcccttaacttattttttggtttc 45467591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 317 - 357
Target Start/End: Complemental strand, 22151917 - 22151877
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  22151917 cttaattactcatttggtcccttaacttattttttggtttc 22151877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 317 - 357
Target Start/End: Complemental strand, 22207832 - 22207792
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  22207832 cttaattactcatttggtcccttaacttattttttggtttc 22207792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 317 - 357
Target Start/End: Original strand, 23350917 - 23350957
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  23350917 cttaattactcatttagtcccttaacttattttttggtttc 23350957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 317 - 357
Target Start/End: Complemental strand, 23351412 - 23351372
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  23351412 cttaattactcatttgatcccttaacttattttttggtttc 23351372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 317 - 357
Target Start/End: Complemental strand, 24417537 - 24417497
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  24417537 cttaattactcttttggtcccttaacttattttttggtttc 24417497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 317 - 357
Target Start/End: Original strand, 36701360 - 36701400
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  36701360 cttaattactcttttggtcccttaacttattttttggtttc 36701400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 317 - 357
Target Start/End: Complemental strand, 36701796 - 36701756
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  36701796 cttaattactcttttggtcccttaacttattttttggtttc 36701756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 317 - 357
Target Start/End: Original strand, 39383807 - 39383847
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  39383807 cttaattactcttttggtcccttaacttattttttggtttc 39383847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 317 - 357
Target Start/End: Original strand, 45057543 - 45057583
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  45057543 cttaattactcttttggtcccttaacttattttttggtttc 45057583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 317 - 359
Target Start/End: Complemental strand, 19070008 - 19069966
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttcat 359  Q
    ||||||||||  |||||||||||||||||||||||||||||||    
T  19070008 cttaattacttttttggtcccttaacttattttttggtttcat 19069966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 317 - 359
Target Start/End: Complemental strand, 19105655 - 19105613
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttcat 359  Q
    ||||||||||| |||||||||||||||||||||||| ||||||    
T  19105655 cttaattactcttttggtcccttaacttattttttgatttcat 19105613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 317 - 359
Target Start/End: Original strand, 24417102 - 24417144
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttcat 359  Q
    ||||||||||  |||||||||||||||||||||||||||||||    
T  24417102 cttaattacttttttggtcccttaacttattttttggtttcat 24417144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 317 - 357
Target Start/End: Original strand, 8735744 - 8735784
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||| |||||||| ||||||||||||||||||||    
T  8735744 cttaattactcttttggtcctttaacttattttttggtttc 8735784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 317 - 357
Target Start/End: Original strand, 11687008 - 11687048
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||| |||||||| ||||||||||||||||||||    
T  11687008 cttaattactcttttggtcctttaacttattttttggtttc 11687048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 317 - 357
Target Start/End: Original strand, 22207467 - 22207507
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||| |||||||| ||||||||||||||||||||    
T  22207467 cttaattactcttttggtcctttaacttattttttggtttc 22207507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 356
Target Start/End: Complemental strand, 45057917 - 45057878
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggttt 356  Q
    ||||||||||| |||| |||||||||||||||||||||||    
T  45057917 cttaattactcttttgatcccttaacttattttttggttt 45057878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 329 - 359
Target Start/End: Original strand, 8735908 - 8735938
Alignment:
Q  329 tttggtcccttaacttattttttggtttcat 359  Q
    |||||||||||||||||||||||||||||||    
T  8735908 tttggtcccttaacttattttttggtttcat 8735938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 317 - 359
Target Start/End: Complemental strand, 11687443 - 11687401
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttcat 359  Q
    ||||||||||  ||||||||||||||||||||||| |||||||    
T  11687443 cttaattacttttttggtcccttaacttattttttagtttcat 11687401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 329 - 359
Target Start/End: Complemental strand, 23351280 - 23351250
Alignment:
Q  329 tttggtcccttaacttattttttggtttcat 359  Q
    |||||||||||||||||||||||||||||||    
T  23351280 tttggtcccttaacttattttttggtttcat 23351250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 317 - 355
Target Start/End: Complemental strand, 36783053 - 36783015
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtt 355  Q
    |||||||| ||| ||||||||||||||||||||||||||    
T  36783053 cttaattattcagttggtcccttaacttattttttggtt 36783015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 329 - 359
Target Start/End: Original strand, 45057615 - 45057645
Alignment:
Q  329 tttggtcccttaacttattttttggtttcat 359  Q
    |||||||||||||||||||||||||||||||    
T  45057615 tttggtcccttaacttattttttggtttcat 45057645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 317 - 354
Target Start/End: Complemental strand, 8736180 - 8736143
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggt 354  Q
    ||||||||||| ||||||||||||| ||||||||||||    
T  8736180 cttaattactcttttggtcccttaatttattttttggt 8736143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 326 - 359
Target Start/End: Complemental strand, 18802499 - 18802466
Alignment:
Q  326 tcatttggtcccttaacttattttttggtttcat 359  Q
    ||||||||||||||||||||||||||| ||||||    
T  18802499 tcatttggtcccttaacttattttttgttttcat 18802466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 317 - 354
Target Start/End: Complemental strand, 22227272 - 22227235
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggt 354  Q
    ||||||||||| |||||||| |||||||||||||||||    
T  22227272 cttaattactcttttggtcctttaacttattttttggt 22227235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 357
Target Start/End: Complemental strand, 22151785 - 22151757
Alignment:
Q  329 tttggtcccttaacttattttttggtttc 357  Q
    |||||||||||||||||||||||||||||    
T  22151785 tttggtcccttaacttattttttggtttc 22151757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 357
Target Start/End: Complemental strand, 22207649 - 22207621
Alignment:
Q  329 tttggtcccttaacttattttttggtttc 357  Q
    |||||||||||||||||||||||||||||    
T  22207649 tttggtcccttaacttattttttggtttc 22207621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 357
Target Start/End: Complemental strand, 22207700 - 22207672
Alignment:
Q  329 tttggtcccttaacttattttttggtttc 357  Q
    |||||||||||||||||||||||||||||    
T  22207700 tttggtcccttaacttattttttggtttc 22207672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 357
Target Start/End: Original strand, 23350989 - 23351017
Alignment:
Q  329 tttggtcccttaacttattttttggtttc 357  Q
    |||||||||||||||||||||||||||||    
T  23350989 tttggtcccttaacttattttttggtttc 23351017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 357
Target Start/End: Original strand, 23351049 - 23351077
Alignment:
Q  329 tttggtcccttaacttattttttggtttc 357  Q
    |||||||||||||||||||||||||||||    
T  23351049 tttggtcccttaacttattttttggtttc 23351077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 357
Target Start/End: Original strand, 23351109 - 23351137
Alignment:
Q  329 tttggtcccttaacttattttttggtttc 357  Q
    |||||||||||||||||||||||||||||    
T  23351109 tttggtcccttaacttattttttggtttc 23351137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 357
Target Start/End: Complemental strand, 23351249 - 23351221
Alignment:
Q  329 tttggtcccttaacttattttttggtttc 357  Q
    |||||||||||||||||||||||||||||    
T  23351249 tttggtcccttaacttattttttggtttc 23351221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 357
Target Start/End: Complemental strand, 36701664 - 36701636
Alignment:
Q  329 tttggtcccttaacttattttttggtttc 357  Q
    |||||||||||||||||||||||||||||    
T  36701664 tttggtcccttaacttattttttggtttc 36701636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 317 - 357
Target Start/End: Original strand, 38340730 - 38340770
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||| |||||| |||||||||||||||| |||||    
T  38340730 cttaattactcttttggttccttaacttattttttagtttc 38340770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 32)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 317 - 357
Target Start/End: Original strand, 27509635 - 27509675
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  27509635 cttaattactcatttggtcccttaacttattttttggtttc 27509675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 317 - 357
Target Start/End: Complemental strand, 32617653 - 32617613
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  32617653 cttaattactcatttggtcccttaacttattttttggtttc 32617613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 317 - 357
Target Start/End: Complemental strand, 9100497 - 9100457
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  9100497 cttaattactcttttggtcccttaacttattttttggtttc 9100457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 317 - 357
Target Start/End: Original strand, 19630765 - 19630805
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  19630765 cttaattactcttttggtcccttaacttattttttggtttc 19630805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 317 - 357
Target Start/End: Original strand, 25764364 - 25764404
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  25764364 cttaattactcttttggtcccttaacttattttttggtttc 25764404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 317 - 357
Target Start/End: Complemental strand, 31208550 - 31208510
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  31208550 cttaattactcttttggtcccttaacttattttttggtttc 31208510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 317 - 357
Target Start/End: Original strand, 39899115 - 39899155
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  39899115 cttaattactcttttggtcccttaacttattttttggtttc 39899155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 317 - 357
Target Start/End: Original strand, 52766155 - 52766195
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  52766155 cttaattactcttttggtcccttaacttattttttggtttc 52766195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 318 - 357
Target Start/End: Original strand, 23329813 - 23329852
Alignment:
Q  318 ttaattactcatttggtcccttaacttattttttggtttc 357  Q
    |||||||||| |||||||||||||||||||||||||||||    
T  23329813 ttaattactcttttggtcccttaacttattttttggtttc 23329852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 317 - 356
Target Start/End: Original strand, 32617218 - 32617257
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggttt 356  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  32617218 cttaattactcatttagtcccttaacttattttttggttt 32617257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 317 - 355
Target Start/End: Complemental strand, 39899539 - 39899501
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtt 355  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  39899539 cttaattactcttttggtcccttaacttattttttggtt 39899501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 317 - 357
Target Start/End: Complemental strand, 9203615 - 9203575
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||| ||||||||| |||||||||||||||||||    
T  9203615 cttaattactcttttggtcccctaacttattttttggtttc 9203575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 317 - 357
Target Start/End: Complemental strand, 9207834 - 9207794
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||| ||||||||| |||||||||||||||||||    
T  9207834 cttaattactcttttggtcccctaacttattttttggtttc 9207794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 317 - 357
Target Start/End: Complemental strand, 11823031 - 11822991
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||| |||| ||||||||||||||||||||||||    
T  11823031 cttaattactcttttgatcccttaacttattttttggtttc 11822991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 317 - 357
Target Start/End: Complemental strand, 19631199 - 19631159
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||| |||||||||||||||||||| ||||||||    
T  19631199 cttaattactcttttggtcccttaacttatttattggtttc 19631159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 317 - 357
Target Start/End: Original strand, 36611044 - 36611084
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||| ||| |||||||||||||||||||||||||    
T  36611044 cttaattactcttttagtcccttaacttattttttggtttc 36611084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 317 - 357
Target Start/End: Complemental strand, 36611420 - 36611380
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||| |||||||||||||||||||||||| ||||    
T  36611420 cttaattactcttttggtcccttaacttattttttgttttc 36611380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 318 - 357
Target Start/End: Complemental strand, 25764799 - 25764760
Alignment:
Q  318 ttaattactcatttggtcccttaacttattttttggtttc 357  Q
    |||||||||| |||||| ||||||||||||||||||||||    
T  25764799 ttaattactcttttggttccttaacttattttttggtttc 25764760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 329 - 359
Target Start/End: Complemental strand, 11822868 - 11822838
Alignment:
Q  329 tttggtcccttaacttattttttggtttcat 359  Q
    |||||||||||||||||||||||||||||||    
T  11822868 tttggtcccttaacttattttttggtttcat 11822838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 329 - 359
Target Start/End: Complemental strand, 23330084 - 23330054
Alignment:
Q  329 tttggtcccttaacttattttttggtttcat 359  Q
    |||||||||||||||||||||||||||||||    
T  23330084 tttggtcccttaacttattttttggtttcat 23330054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 329 - 359
Target Start/End: Original strand, 52766318 - 52766348
Alignment:
Q  329 tttggtcccttaacttattttttggtttcat 359  Q
    |||||||||||||||||||||||||||||||    
T  52766318 tttggtcccttaacttattttttggtttcat 52766348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 329 - 359
Target Start/End: Original strand, 55013847 - 55013877
Alignment:
Q  329 tttggtcccttaacttattttttggtttcat 359  Q
    |||||||||||||||||||||||||||||||    
T  55013847 tttggtcccttaacttattttttggtttcat 55013877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 317 - 350
Target Start/End: Original strand, 11822668 - 11822701
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttt 350  Q
    ||||||||||| ||||||||||||||||||||||    
T  11822668 cttaattactcttttggtcccttaacttattttt 11822701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 317 - 357
Target Start/End: Original strand, 93608 - 93648
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||  ||||||||||||||||| |||||||||||    
T  93608 cttaattacttttttggtcccttaacttaatttttggtttc 93648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 357
Target Start/End: Complemental strand, 19631067 - 19631039
Alignment:
Q  329 tttggtcccttaacttattttttggtttc 357  Q
    |||||||||||||||||||||||||||||    
T  19631067 tttggtcccttaacttattttttggtttc 19631039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 317 - 357
Target Start/End: Complemental strand, 26108027 - 26107987
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||  |||||| ||||||||||||||||||||||    
T  26108027 cttaattacttttttggttccttaacttattttttggtttc 26107987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 357
Target Start/End: Complemental strand, 27509878 - 27509850
Alignment:
Q  329 tttggtcccttaacttattttttggtttc 357  Q
    |||||||||||||||||||||||||||||    
T  27509878 tttggtcccttaacttattttttggtttc 27509850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 357
Target Start/End: Original strand, 32617381 - 32617409
Alignment:
Q  329 tttggtcccttaacttattttttggtttc 357  Q
    |||||||||||||||||||||||||||||    
T  32617381 tttggtcccttaacttattttttggtttc 32617409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 357
Target Start/End: Original strand, 39899247 - 39899275
Alignment:
Q  329 tttggtcccttaacttattttttggtttc 357  Q
    |||||||||||||||||||||||||||||    
T  39899247 tttggtcccttaacttattttttggtttc 39899275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 317 - 357
Target Start/End: Original strand, 51949277 - 51949317
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||| ||||||||||||| ||||||||| |||||    
T  51949277 cttaattactcttttggtcccttaatttattttttagtttc 51949317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 357
Target Start/End: Complemental strand, 51949605 - 51949577
Alignment:
Q  329 tttggtcccttaacttattttttggtttc 357  Q
    |||||||||||||||||||||||||||||    
T  51949605 tttggtcccttaacttattttttggtttc 51949577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 317 - 357
Target Start/End: Complemental strand, 55014090 - 55014050
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||| ||| |||| ||||||||||||||||||||    
T  55014090 cttaattactcttttagtccattaacttattttttggtttc 55014050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 317 - 359
Target Start/End: Original strand, 6674 - 6716
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttcat 359  Q
    ||||||||||| |||||||||||||||||||||||||||||||    
T  6674 cttaattactcttttggtcccttaacttattttttggtttcat 6716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 357
Target Start/End: Complemental strand, 6976 - 6948
Alignment:
Q  329 tttggtcccttaacttattttttggtttc 357  Q
    |||||||||||||||||||||||||||||    
T  6976 tttggtcccttaacttattttttggtttc 6948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295 (Bit Score: 37; Significance: 0.000000000009; HSPs: 2)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 317 - 357
Target Start/End: Complemental strand, 8272 - 8232
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  8272 cttaattactcttttggtcccttaacttattttttggtttc 8232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 329 - 359
Target Start/End: Complemental strand, 8108 - 8078
Alignment:
Q  329 tttggtcccttaacttattttttggtttcat 359  Q
    |||||||||||||||||||||||||||||||    
T  8108 tttggtcccttaacttattttttggtttcat 8078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 37; Significance: 0.000000000009; HSPs: 3)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 317 - 357
Target Start/End: Complemental strand, 18773 - 18733
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  18773 cttaattactcttttggtcccttaacttattttttggtttc 18733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 357
Target Start/End: Original strand, 18440 - 18468
Alignment:
Q  329 tttggtcccttaacttattttttggtttc 357  Q
    |||||||||||||||||||||||||||||    
T  18440 tttggtcccttaacttattttttggtttc 18468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 357
Target Start/End: Original strand, 18471 - 18499
Alignment:
Q  329 tttggtcccttaacttattttttggtttc 357  Q
    |||||||||||||||||||||||||||||    
T  18471 tttggtcccttaacttattttttggtttc 18499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 37; Significance: 0.000000000009; HSPs: 3)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 317 - 357
Target Start/End: Original strand, 27671 - 27711
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  27671 cttaattactcttttggtcccttaacttattttttggtttc 27711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 357
Target Start/End: Complemental strand, 27943 - 27915
Alignment:
Q  329 tttggtcccttaacttattttttggtttc 357  Q
    |||||||||||||||||||||||||||||    
T  27943 tttggtcccttaacttattttttggtttc 27915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 357
Target Start/End: Complemental strand, 27974 - 27946
Alignment:
Q  329 tttggtcccttaacttattttttggtttc 357  Q
    |||||||||||||||||||||||||||||    
T  27974 tttggtcccttaacttattttttggtttc 27946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 37; Significance: 0.000000000009; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 317 - 357
Target Start/End: Complemental strand, 100036 - 99996
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  100036 cttaattactcttttggtcccttaacttattttttggtttc 99996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 317 - 357
Target Start/End: Original strand, 99601 - 99641
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||| |||| ||||||||||||||||||||||||    
T  99601 cttaattactcttttgatcccttaacttattttttggtttc 99641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 317 - 357
Target Start/End: Complemental strand, 172967 - 172927
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  172967 cttaattactcttttggtcccttaacttattttttggtttc 172927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 37; Significance: 0.000000000009; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 317 - 357
Target Start/End: Original strand, 144720 - 144760
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  144720 cttaattactcttttggtcccttaacttattttttggtttc 144760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 329 - 359
Target Start/End: Original strand, 144883 - 144913
Alignment:
Q  329 tttggtcccttaacttattttttggtttcat 359  Q
    |||||||||||||||||||||||||||||||    
T  144883 tttggtcccttaacttattttttggtttcat 144913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 37; Significance: 0.000000000009; HSPs: 64)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 317 - 357
Target Start/End: Original strand, 1155966 - 1156006
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  1155966 cttaattactcttttggtcccttaacttattttttggtttc 1156006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 317 - 357
Target Start/End: Original strand, 4349497 - 4349537
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  4349497 cttaattactcttttggtcccttaacttattttttggtttc 4349537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 317 - 357
Target Start/End: Complemental strand, 4349931 - 4349891
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  4349931 cttaattactcttttggtcccttaacttattttttggtttc 4349891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 317 - 357
Target Start/End: Complemental strand, 6172397 - 6172357
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  6172397 cttaattactcttttggtcccttaacttattttttggtttc 6172357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 317 - 357
Target Start/End: Original strand, 8127474 - 8127514
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  8127474 cttaattactcttttggtcccttaacttattttttggtttc 8127514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 317 - 357
Target Start/End: Original strand, 9040745 - 9040785
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  9040745 cttaattactcttttggtcccttaacttattttttggtttc 9040785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 317 - 357
Target Start/End: Original strand, 9438239 - 9438279
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  9438239 cttaattactcttttggtcccttaacttattttttggtttc 9438279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 317 - 357
Target Start/End: Original strand, 14858298 - 14858338
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  14858298 cttaattactcttttggtcccttaacttattttttggtttc 14858338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 317 - 357
Target Start/End: Original strand, 16791973 - 16792013
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  16791973 cttaattactcttttggtcccttaacttattttttggtttc 16792013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 317 - 357
Target Start/End: Complemental strand, 21289586 - 21289546
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  21289586 cttaattactcttttggtcccttaacttattttttggtttc 21289546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 317 - 357
Target Start/End: Complemental strand, 22803646 - 22803606
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  22803646 cttaattactcttttggtcccttaacttattttttggtttc 22803606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 317 - 357
Target Start/End: Complemental strand, 24100324 - 24100284
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  24100324 cttaattactcttttggtcccttaacttattttttggtttc 24100284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 317 - 357
Target Start/End: Complemental strand, 31369983 - 31369943
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  31369983 cttaattactcttttggtcccttaacttattttttggtttc 31369943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 317 - 357
Target Start/End: Original strand, 37812233 - 37812273
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  37812233 cttaattactcttttggtcccttaacttattttttggtttc 37812273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 317 - 357
Target Start/End: Original strand, 42026285 - 42026325
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  42026285 cttaattactcttttggtcccttaacttattttttggtttc 42026325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 317 - 357
Target Start/End: Complemental strand, 42026720 - 42026680
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  42026720 cttaattactcttttggtcccttaacttattttttggtttc 42026680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 317 - 357
Target Start/End: Original strand, 42381794 - 42381834
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  42381794 cttaattactcttttggtcccttaacttattttttggtttc 42381834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 317 - 357
Target Start/End: Complemental strand, 42382229 - 42382189
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  42382229 cttaattactcttttggtcccttaacttattttttggtttc 42382189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 317 - 357
Target Start/End: Complemental strand, 43476494 - 43476454
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  43476494 cttaattactcttttggtcccttaacttattttttggtttc 43476454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 320 - 359
Target Start/End: Complemental strand, 10570436 - 10570397
Alignment:
Q  320 aattactcatttggtcccttaacttattttttggtttcat 359  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  10570436 aattactcttttggtcccttaacttattttttggtttcat 10570397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 317 - 357
Target Start/End: Complemental strand, 1156400 - 1156360
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||| ||||||||| |||||||||||||||||||    
T  1156400 cttaattactcttttggtcccataacttattttttggtttc 1156360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 317 - 357
Target Start/End: Original strand, 6131866 - 6131906
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||| |||||||||||||||| ||||||||||||    
T  6131866 cttaattactcttttggtcccttaacttgttttttggtttc 6131906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 317 - 357
Target Start/End: Complemental strand, 6132302 - 6132262
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||| |||||| ||||||||||||||||||||||    
T  6132302 cttaattactcttttggttccttaacttattttttggtttc 6132262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 317 - 357
Target Start/End: Complemental strand, 9438673 - 9438633
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||| |||||||||||||||||||| ||||||||    
T  9438673 cttaattactcttttggtcccttaacttatttattggtttc 9438633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 317 - 357
Target Start/End: Complemental strand, 14858631 - 14858591
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||| |||||||||||||||||||||||| ||||    
T  14858631 cttaattactcttttggtcccttaacttattttttgatttc 14858591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 317 - 357
Target Start/End: Complemental strand, 29906338 - 29906298
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||| ||||||||||| |||||||||||||||||    
T  29906338 cttaattactcttttggtcccttgacttattttttggtttc 29906298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 317 - 357
Target Start/End: Complemental strand, 37812607 - 37812567
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||  |||||||||||||||||||||||||||||    
T  37812607 cttaattacttttttggtcccttaacttattttttggtttc 37812567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 317 - 357
Target Start/End: Original strand, 42381204 - 42381244
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||| |||||| ||||||||||||||||||||||    
T  42381204 cttaattactcttttggttccttaacttattttttggtttc 42381244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 352
Target Start/End: Complemental strand, 8127848 - 8127813
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttg 352  Q
    ||||||||||| ||||||||||||||||||||||||    
T  8127848 cttaattactcttttggtcccttaacttattttttg 8127813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 318 - 357
Target Start/End: Original strand, 17094206 - 17094245
Alignment:
Q  318 ttaattactcatttggtcccttaacttattttttggtttc 357  Q
    |||||||||| ||||||| |||||||||||||||||||||    
T  17094206 ttaattactcttttggtctcttaacttattttttggtttc 17094245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 318 - 357
Target Start/End: Complemental strand, 17094639 - 17094600
Alignment:
Q  318 ttaattactcatttggtcccttaacttattttttggtttc 357  Q
    |||||||||  |||||||||||||||||||||||||||||    
T  17094639 ttaattacttttttggtcccttaacttattttttggtttc 17094600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 318 - 357
Target Start/End: Original strand, 36442163 - 36442202
Alignment:
Q  318 ttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||| || |||||||||||||||||||||||||||||    
T  36442163 ttaattattcttttggtcccttaacttattttttggtttc 36442202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 329 - 359
Target Start/End: Original strand, 6172125 - 6172155
Alignment:
Q  329 tttggtcccttaacttattttttggtttcat 359  Q
    |||||||||||||||||||||||||||||||    
T  6172125 tttggtcccttaacttattttttggtttcat 6172155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 329 - 359
Target Start/End: Complemental strand, 10503905 - 10503875
Alignment:
Q  329 tttggtcccttaacttattttttggtttcat 359  Q
    |||||||||||||||||||||||||||||||    
T  10503905 tttggtcccttaacttattttttggtttcat 10503875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 317 - 351
Target Start/End: Complemental strand, 10504068 - 10504034
Alignment:
Q  317 cttaattactcatttggtcccttaacttatttttt 351  Q
    ||||||||||| |||||||||||||||||||||||    
T  10504068 cttaattactcttttggtcccttaacttatttttt 10504034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 329 - 359
Target Start/End: Complemental strand, 10570307 - 10570277
Alignment:
Q  329 tttggtcccttaacttattttttggtttcat 359  Q
    |||||||||||||||||||||||||||||||    
T  10570307 tttggtcccttaacttattttttggtttcat 10570277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 329 - 359
Target Start/End: Complemental strand, 17094477 - 17094447
Alignment:
Q  329 tttggtcccttaacttattttttggtttcat 359  Q
    |||||||||||||||||||||||||||||||    
T  17094477 tttggtcccttaacttattttttggtttcat 17094447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 329 - 359
Target Start/End: Complemental strand, 20841898 - 20841868
Alignment:
Q  329 tttggtcccttaacttattttttggtttcat 359  Q
    |||||||||||||||||||||||||||||||    
T  20841898 tttggtcccttaacttattttttggtttcat 20841868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 329 - 359
Target Start/End: Complemental strand, 21289423 - 21289393
Alignment:
Q  329 tttggtcccttaacttattttttggtttcat 359  Q
    |||||||||||||||||||||||||||||||    
T  21289423 tttggtcccttaacttattttttggtttcat 21289393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 329 - 359
Target Start/End: Complemental strand, 31369881 - 31369851
Alignment:
Q  329 tttggtcccttaacttattttttggtttcat 359  Q
    |||||||||||||||||||||||||||||||    
T  31369881 tttggtcccttaacttattttttggtttcat 31369851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 329 - 359
Target Start/End: Complemental strand, 36442434 - 36442404
Alignment:
Q  329 tttggtcccttaacttattttttggtttcat 359  Q
    |||||||||||||||||||||||||||||||    
T  36442434 tttggtcccttaacttattttttggtttcat 36442404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 329 - 359
Target Start/End: Original strand, 42381957 - 42381987
Alignment:
Q  329 tttggtcccttaacttattttttggtttcat 359  Q
    |||||||||||||||||||||||||||||||    
T  42381957 tttggtcccttaacttattttttggtttcat 42381987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 317 - 359
Target Start/End: Original strand, 43476059 - 43476101
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttcat 359  Q
    ||||||||||| |||||||||||||||  ||||||||||||||    
T  43476059 cttaattactcttttggtcccttaactctttttttggtttcat 43476101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 357
Target Start/End: Original strand, 1156038 - 1156066
Alignment:
Q  329 tttggtcccttaacttattttttggtttc 357  Q
    |||||||||||||||||||||||||||||    
T  1156038 tttggtcccttaacttattttttggtttc 1156066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 357
Target Start/End: Original strand, 1156098 - 1156126
Alignment:
Q  329 tttggtcccttaacttattttttggtttc 357  Q
    |||||||||||||||||||||||||||||    
T  1156098 tttggtcccttaacttattttttggtttc 1156126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 357
Target Start/End: Complemental strand, 1156268 - 1156240
Alignment:
Q  329 tttggtcccttaacttattttttggtttc 357  Q
    |||||||||||||||||||||||||||||    
T  1156268 tttggtcccttaacttattttttggtttc 1156240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 357
Target Start/End: Complemental strand, 1156328 - 1156300
Alignment:
Q  329 tttggtcccttaacttattttttggtttc 357  Q
    |||||||||||||||||||||||||||||    
T  1156328 tttggtcccttaacttattttttggtttc 1156300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 357
Target Start/End: Original strand, 4349629 - 4349657
Alignment:
Q  329 tttggtcccttaacttattttttggtttc 357  Q
    |||||||||||||||||||||||||||||    
T  4349629 tttggtcccttaacttattttttggtttc 4349657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 357
Target Start/End: Complemental strand, 6132170 - 6132142
Alignment:
Q  329 tttggtcccttaacttattttttggtttc 357  Q
    |||||||||||||||||||||||||||||    
T  6132170 tttggtcccttaacttattttttggtttc 6132142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 317 - 357
Target Start/End: Original strand, 6171963 - 6172003
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    |||||||| || ||||||| |||||||||||||||||||||    
T  6171963 cttaattattcttttggtctcttaacttattttttggtttc 6172003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 357
Target Start/End: Original strand, 9040817 - 9040845
Alignment:
Q  329 tttggtcccttaacttattttttggtttc 357  Q
    |||||||||||||||||||||||||||||    
T  9040817 tttggtcccttaacttattttttggtttc 9040845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 357
Target Start/End: Complemental strand, 9438541 - 9438513
Alignment:
Q  329 tttggtcccttaacttattttttggtttc 357  Q
    |||||||||||||||||||||||||||||    
T  9438541 tttggtcccttaacttattttttggtttc 9438513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 317 - 357
Target Start/End: Original strand, 10570034 - 10570074
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    |||||||| || |||| ||||||||||||||||||||||||    
T  10570034 cttaattattcttttgatcccttaacttattttttggtttc 10570074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 357
Target Start/End: Complemental strand, 13476936 - 13476908
Alignment:
Q  329 tttggtcccttaacttattttttggtttc 357  Q
    |||||||||||||||||||||||||||||    
T  13476936 tttggtcccttaacttattttttggtttc 13476908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 317 - 357
Target Start/End: Original strand, 22803210 - 22803250
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||| |||||| ||||||||||||||||| ||||    
T  22803210 cttaattactcttttggttccttaacttattttttgatttc 22803250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 357
Target Start/End: Original strand, 22803342 - 22803370
Alignment:
Q  329 tttggtcccttaacttattttttggtttc 357  Q
    |||||||||||||||||||||||||||||    
T  22803342 tttggtcccttaacttattttttggtttc 22803370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 357
Target Start/End: Complemental strand, 24100192 - 24100164
Alignment:
Q  329 tttggtcccttaacttattttttggtttc 357  Q
    |||||||||||||||||||||||||||||    
T  24100192 tttggtcccttaacttattttttggtttc 24100164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 317 - 357
Target Start/End: Original strand, 29905993 - 29906033
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||| ||||||  |||||||||||||||||||||    
T  29905993 cttaattactcttttggtttcttaacttattttttggtttc 29906033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 317 - 357
Target Start/End: Complemental strand, 36442597 - 36442557
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||| |||| |||||||||||||||||| |||||    
T  36442597 cttaattactcttttgatcccttaacttatttttttgtttc 36442557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 357
Target Start/End: Original strand, 37812365 - 37812393
Alignment:
Q  329 tttggtcccttaacttattttttggtttc 357  Q
    |||||||||||||||||||||||||||||    
T  37812365 tttggtcccttaacttattttttggtttc 37812393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 357
Target Start/End: Complemental strand, 37812535 - 37812507
Alignment:
Q  329 tttggtcccttaacttattttttggtttc 357  Q
    |||||||||||||||||||||||||||||    
T  37812535 tttggtcccttaacttattttttggtttc 37812507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 357
Target Start/End: Original strand, 42026417 - 42026445
Alignment:
Q  329 tttggtcccttaacttattttttggtttc 357  Q
    |||||||||||||||||||||||||||||    
T  42026417 tttggtcccttaacttattttttggtttc 42026445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 321 - 357
Target Start/End: Complemental strand, 42381635 - 42381599
Alignment:
Q  321 attactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||| ||||||||||||||||||||||| |||||    
T  42381635 attactcttttggtcccttaacttattttttagtttc 42381599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 357
Target Start/End: Original strand, 42381926 - 42381954
Alignment:
Q  329 tttggtcccttaacttattttttggtttc 357  Q
    |||||||||||||||||||||||||||||    
T  42381926 tttggtcccttaacttattttttggtttc 42381954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 37; Significance: 0.000000000009; HSPs: 26)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 317 - 357
Target Start/End: Original strand, 7203960 - 7204000
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  7203960 cttaattactcgtttggtcccttaacttattttttggtttc 7204000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 317 - 357
Target Start/End: Complemental strand, 7204363 - 7204323
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    |||||||||||||||||||| ||||||||||||||||||||    
T  7204363 cttaattactcatttggtccattaacttattttttggtttc 7204323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 317 - 357
Target Start/End: Original strand, 10579296 - 10579336
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  10579296 cttaattactcttttggtcccttaacttattttttggtttc 10579336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 317 - 357
Target Start/End: Complemental strand, 10579731 - 10579691
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  10579731 cttaattactcttttggtcccttaacttattttttggtttc 10579691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 317 - 357
Target Start/End: Original strand, 11652878 - 11652918
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  11652878 cttaattactcttttggtcccttaacttattttttggtttc 11652918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 317 - 357
Target Start/End: Complemental strand, 14499633 - 14499593
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  14499633 cttaattactcttttggtcccttaacttattttttggtttc 14499593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 317 - 357
Target Start/End: Complemental strand, 17738722 - 17738682
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  17738722 cttaattactcttttggtcccttaacttattttttggtttc 17738682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 317 - 357
Target Start/End: Original strand, 17750128 - 17750168
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  17750128 cttaattactcttttggtcccttaacttattttttggtttc 17750168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 317 - 357
Target Start/End: Complemental strand, 48225450 - 48225410
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  48225450 cttaattactcttttggtcccttaacttattttttggtttc 48225410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 318 - 357
Target Start/End: Original strand, 14499259 - 14499298
Alignment:
Q  318 ttaattactcatttggtcccttaacttattttttggtttc 357  Q
    |||||||||| |||||||||||||||||||||||||||||    
T  14499259 ttaattactcttttggtcccttaacttattttttggtttc 14499298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 318 - 357
Target Start/End: Complemental strand, 28999485 - 28999446
Alignment:
Q  318 ttaattactcatttggtcccttaacttattttttggtttc 357  Q
    |||||||||| |||||||||||||||||||||||||||||    
T  28999485 ttaattactcttttggtcccttaacttattttttggtttc 28999446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 318 - 359
Target Start/End: Original strand, 52051233 - 52051274
Alignment:
Q  318 ttaattactcatttggtcccttaacttattttttggtttcat 359  Q
    |||||||||| |||||||||||||||||||||||| ||||||    
T  52051233 ttaattactcttttggtcccttaacttattttttgatttcat 52051274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 329 - 359
Target Start/End: Complemental strand, 7204231 - 7204201
Alignment:
Q  329 tttggtcccttaacttattttttggtttcat 359  Q
    |||||||||||||||||||||||||||||||    
T  7204231 tttggtcccttaacttattttttggtttcat 7204201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 329 - 359
Target Start/End: Original strand, 10579459 - 10579489
Alignment:
Q  329 tttggtcccttaacttattttttggtttcat 359  Q
    |||||||||||||||||||||||||||||||    
T  10579459 tttggtcccttaacttattttttggtttcat 10579489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 329 - 359
Target Start/End: Original strand, 14499421 - 14499451
Alignment:
Q  329 tttggtcccttaacttattttttggtttcat 359  Q
    |||||||||||||||||||||||||||||||    
T  14499421 tttggtcccttaacttattttttggtttcat 14499451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 329 - 359
Target Start/End: Complemental strand, 52051504 - 52051474
Alignment:
Q  329 tttggtcccttaacttattttttggtttcat 359  Q
    |||||||||||||||||||||||||||||||    
T  52051504 tttggtcccttaacttattttttggtttcat 52051474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 357
Target Start/End: Original strand, 10579428 - 10579456
Alignment:
Q  329 tttggtcccttaacttattttttggtttc 357  Q
    |||||||||||||||||||||||||||||    
T  10579428 tttggtcccttaacttattttttggtttc 10579456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 317 - 357
Target Start/End: Original strand, 13834713 - 13834753
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||| |||||| |||||||||||||||| |||||    
T  13834713 cttaattactcttttggttccttaacttatttttttgtttc 13834753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 357
Target Start/End: Original strand, 13834845 - 13834873
Alignment:
Q  329 tttggtcccttaacttattttttggtttc 357  Q
    |||||||||||||||||||||||||||||    
T  13834845 tttggtcccttaacttattttttggtttc 13834873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 357
Target Start/End: Complemental strand, 13835015 - 13834987
Alignment:
Q  329 tttggtcccttaacttattttttggtttc 357  Q
    |||||||||||||||||||||||||||||    
T  13835015 tttggtcccttaacttattttttggtttc 13834987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 317 - 357
Target Start/End: Original strand, 17738256 - 17738296
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    |||||||| || ||||||||||||||||||||||| |||||    
T  17738256 cttaattattcttttggtcccttaacttatttttttgtttc 17738296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 357
Target Start/End: Complemental strand, 17738559 - 17738531
Alignment:
Q  329 tttggtcccttaacttattttttggtttc 357  Q
    |||||||||||||||||||||||||||||    
T  17738559 tttggtcccttaacttattttttggtttc 17738531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 357
Target Start/End: Complemental strand, 17738590 - 17738562
Alignment:
Q  329 tttggtcccttaacttattttttggtttc 357  Q
    |||||||||||||||||||||||||||||    
T  17738590 tttggtcccttaacttattttttggtttc 17738562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 317 - 357
Target Start/End: Complemental strand, 17750594 - 17750554
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    |||||||| || ||||||||||||||||||||||| |||||    
T  17750594 cttaattattcttttggtcccttaacttatttttttgtttc 17750554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 317 - 357
Target Start/End: Original strand, 28991026 - 28991066
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||| ||||||| |||||||||||||||| ||||    
T  28991026 cttaattactcttttggtctcttaacttattttttgatttc 28991066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 326 - 358
Target Start/End: Original strand, 48467267 - 48467299
Alignment:
Q  326 tcatttggtcccttaacttattttttggtttca 358  Q
    ||||||||||||||||||||||||||| |||||    
T  48467267 tcatttggtcccttaacttattttttgttttca 48467299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 319 - 357
Target Start/End: Original strand, 4873 - 4911
Alignment:
Q  319 taattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  4873 taattactcttttggtcccttaacttattttttggtttc 4911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 317 - 357
Target Start/End: Complemental strand, 5244 - 5204
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||  |||||||||||||||||||||||||||||    
T  5244 cttaattacttttttggtcccttaacttattttttggtttc 5204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 33; Significance: 0.000000002; HSPs: 3)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 317 - 357
Target Start/End: Complemental strand, 11480 - 11440
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||| ||||||||||||||||| |||||||||||    
T  11480 cttaattactcttttggtcccttaacttaatttttggtttc 11440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 329 - 359
Target Start/End: Complemental strand, 11348 - 11318
Alignment:
Q  329 tttggtcccttaacttattttttggtttcat 359  Q
    |||||||||||||||||||||||||||||||    
T  11348 tttggtcccttaacttattttttggtttcat 11318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 317 - 357
Target Start/End: Original strand, 11137 - 11177
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||  ||||||||||||| |||||||||||||||    
T  11137 cttaattactattttggtcccttaatttattttttggtttc 11177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135 (Bit Score: 33; Significance: 0.000000002; HSPs: 13)
Name: scaffold0135
Description:

Target: scaffold0135; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 317 - 357
Target Start/End: Complemental strand, 1698 - 1658
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||| ||||||||| |||||||||||||||||||    
T  1698 cttaattactcttttggtcccctaacttattttttggtttc 1658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 317 - 357
Target Start/End: Complemental strand, 5913 - 5873
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||| ||||||||| |||||||||||||||||||    
T  5913 cttaattactcttttggtcccctaacttattttttggtttc 5873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 317 - 357
Target Start/End: Complemental strand, 10128 - 10088
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||| ||||||||| |||||||||||||||||||    
T  10128 cttaattactcttttggtcccctaacttattttttggtttc 10088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 317 - 357
Target Start/End: Complemental strand, 14343 - 14303
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||| ||||||||| |||||||||||||||||||    
T  14343 cttaattactcttttggtcccctaacttattttttggtttc 14303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 317 - 357
Target Start/End: Complemental strand, 18558 - 18518
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||| ||||||||| |||||||||||||||||||    
T  18558 cttaattactcttttggtcccctaacttattttttggtttc 18518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 317 - 357
Target Start/End: Complemental strand, 22773 - 22733
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||| ||||||||| |||||||||||||||||||    
T  22773 cttaattactcttttggtcccctaacttattttttggtttc 22733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 317 - 357
Target Start/End: Complemental strand, 26988 - 26948
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||||| ||||||||| |||||||||||||||||||    
T  26988 cttaattactcttttggtcccctaacttattttttggtttc 26948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 329 - 359
Target Start/End: Complemental strand, 5810 - 5780
Alignment:
Q  329 tttggtcccttaacttattttttggtttcat 359  Q
    |||||||||||||||||||||||||||||||    
T  5810 tttggtcccttaacttattttttggtttcat 5780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 329 - 359
Target Start/End: Complemental strand, 10025 - 9995
Alignment:
Q  329 tttggtcccttaacttattttttggtttcat 359  Q
    |||||||||||||||||||||||||||||||    
T  10025 tttggtcccttaacttattttttggtttcat 9995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 329 - 359
Target Start/End: Complemental strand, 14240 - 14210
Alignment:
Q  329 tttggtcccttaacttattttttggtttcat 359  Q
    |||||||||||||||||||||||||||||||    
T  14240 tttggtcccttaacttattttttggtttcat 14210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 329 - 359
Target Start/End: Complemental strand, 18455 - 18425
Alignment:
Q  329 tttggtcccttaacttattttttggtttcat 359  Q
    |||||||||||||||||||||||||||||||    
T  18455 tttggtcccttaacttattttttggtttcat 18425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 329 - 359
Target Start/End: Complemental strand, 22670 - 22640
Alignment:
Q  329 tttggtcccttaacttattttttggtttcat 359  Q
    |||||||||||||||||||||||||||||||    
T  22670 tttggtcccttaacttattttttggtttcat 22640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 329 - 359
Target Start/End: Complemental strand, 26885 - 26855
Alignment:
Q  329 tttggtcccttaacttattttttggtttcat 359  Q
    |||||||||||||||||||||||||||||||    
T  26885 tttggtcccttaacttattttttggtttcat 26855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 317 - 357
Target Start/End: Original strand, 11784 - 11824
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttc 357  Q
    ||||||||| | |||||||||||||||||||||||||||||    
T  11784 cttaattacacttttggtcccttaacttattttttggtttc 11824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0237 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 317 - 359
Target Start/End: Complemental strand, 26248 - 26206
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttcat 359  Q
    ||||||||||  ||||||||| |||||||||||||||||||||    
T  26248 cttaattactattttggtcccctaacttattttttggtttcat 26206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 317 - 358
Target Start/End: Complemental strand, 56819 - 56778
Alignment:
Q  317 cttaattactcatttggtcccttaacttattttttggtttca 358  Q
    |||||| | ||||||||||||||||||||||||||| |||||    
T  56819 cttaataaatcatttggtcccttaacttattttttgatttca 56778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University