View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16020_high_82 (Length: 292)
Name: NF16020_high_82
Description: NF16020
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16020_high_82 |
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Alignment Details
Target: chr7 (Bit Score: 263; Significance: 1e-147; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 263; E-Value: 1e-147
Query Start/End: Original strand, 1 - 275
Target Start/End: Original strand, 18267133 - 18267407
Alignment:
| Q |
1 |
atagctcatatctaacataacaagaactatacaacactctacaacctttacgattgctacaaaaagtttgaaaattgttcactgcaatagccaaacattg |
100 |
Q |
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|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
18267133 |
atagttcatatctaacataacaagaactatacaacactctacaacctttacgattgctacaaaaagtttgaaaattgttcactgcaatagccaaacattg |
18267232 |
T |
|
| Q |
101 |
agcacaagaaatctcatcaaggtccctagtacattgaaccaatccataaagtgtcacaaatggtgacaacactgtttttccctttccaagccctttattt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
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| T |
18267233 |
agcacaagaaatctcatcaaggtccctagtacattgaaccaatccataaagtgtcacaaatggtgacaacacagtttttccctttccaagccctttattt |
18267332 |
T |
|
| Q |
201 |
ttaaccataacagcttctcctcttatttgatccattaaatttccaagtttcttgttaaaaacctcagaatcagtt |
275 |
Q |
| |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
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| T |
18267333 |
ttaaccataacagcttctcctcttatttgatccattaaatttccaagtttcttgttaaaaacttcagaatcagtt |
18267407 |
T |
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