View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16020_low_133 (Length: 217)

Name: NF16020_low_133
Description: NF16020
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16020_low_133
NF16020_low_133
[»] chr7 (62 HSPs)
chr7 (9-171)||(23101364-23101526)
chr7 (9-171)||(28342413-28342575)
chr7 (9-170)||(39784165-39784326)
chr7 (9-171)||(29614736-29614898)
chr7 (9-168)||(18838455-18838614)
chr7 (9-168)||(3022992-3023151)
chr7 (9-168)||(7993208-7993367)
chr7 (9-168)||(9882212-9882370)
chr7 (9-168)||(28034780-28034939)
chr7 (9-168)||(8675399-8675557)
chr7 (15-168)||(33382709-33382862)
chr7 (9-171)||(509722-509874)
chr7 (14-168)||(44256741-44256895)
chr7 (9-168)||(40460692-40460841)
chr7 (29-168)||(37972842-37972981)
chr7 (29-168)||(41827390-41827529)
chr7 (9-164)||(12740439-12740593)
chr7 (10-168)||(44121885-44122033)
chr7 (9-168)||(46405416-46405565)
chr7 (14-149)||(973262-973397)
chr7 (14-149)||(7719254-7719389)
chr7 (15-161)||(43187339-43187485)
chr7 (9-149)||(47914339-47914479)
chr7 (9-149)||(7718356-7718496)
chr7 (9-164)||(29585580-29585725)
chr7 (9-109)||(32883848-32883948)
chr7 (9-168)||(37327993-37328142)
chr7 (9-149)||(40996643-40996783)
chr7 (9-137)||(43581096-43581224)
chr7 (14-149)||(34695351-34695486)
chr7 (9-158)||(10068533-10068682)
chr7 (9-149)||(18914729-18914869)
chr7 (9-149)||(30440869-30441009)
chr7 (14-149)||(32142911-32143046)
chr7 (14-149)||(44343390-44343525)
chr7 (15-149)||(12893487-12893621)
chr7 (9-137)||(20275269-20275397)
chr7 (9-168)||(39028163-39028312)
chr7 (9-149)||(47879241-47879381)
chr7 (15-149)||(39219371-39219504)
chr7 (9-158)||(12963767-12963911)
chr7 (14-149)||(34009091-34009226)
chr7 (9-134)||(33892269-33892384)
chr7 (14-114)||(43679492-43679592)
chr7 (14-149)||(7113530-7113665)
chr7 (18-150)||(19810874-19810996)
chr7 (12-113)||(25805761-25805862)
chr7 (9-76)||(19251605-19251672)
chr7 (17-103)||(10676460-10676546)
chr7 (80-149)||(17001037-17001106)
chr7 (9-140)||(47066770-47066881)
chr7 (12-73)||(447852-447913)
chr7 (9-76)||(31638948-31639015)
chr7 (9-158)||(3797052-3797191)
chr7 (9-149)||(9179946-9180076)
chr7 (14-67)||(17001099-17001152)
chr7 (17-124)||(727594-727691)
chr7 (49-158)||(10617024-10617134)
chr7 (120-166)||(32883944-32883990)
chr7 (12-86)||(1470291-1470364)
chr7 (131-168)||(29893173-29893210)
chr7 (9-67)||(44623352-44623410)
[»] chr4 (61 HSPs)
chr4 (9-171)||(5441475-5441637)
chr4 (9-171)||(27768127-27768289)
chr4 (9-171)||(54341215-54341377)
chr4 (9-171)||(37828375-37828537)
chr4 (9-171)||(48261198-48261360)
chr4 (9-168)||(37915898-37916057)
chr4 (9-168)||(51320992-51321151)
chr4 (9-164)||(54853448-54853603)
chr4 (9-162)||(32322162-32322315)
chr4 (9-168)||(23987285-23987434)
chr4 (9-171)||(41725196-41725352)
chr4 (9-168)||(30967285-30967434)
chr4 (9-149)||(34228578-34228718)
chr4 (14-149)||(41881077-41881212)
chr4 (9-168)||(49501495-49501646)
chr4 (9-168)||(49507560-49507711)
chr4 (9-146)||(55302914-55303051)
chr4 (9-149)||(1112964-1113104)
chr4 (15-149)||(12113022-12113156)
chr4 (11-149)||(39479350-39479488)
chr4 (9-168)||(5800049-5800198)
chr4 (9-149)||(25331202-25331342)
chr4 (9-149)||(30009672-30009812)
chr4 (9-149)||(32950831-32950971)
chr4 (15-137)||(3436670-3436792)
chr4 (9-149)||(7007445-7007585)
chr4 (50-158)||(8711978-8712086)
chr4 (9-149)||(41320881-41321021)
chr4 (9-149)||(42786755-42786895)
chr4 (15-135)||(44770862-44770982)
chr4 (9-123)||(19740929-19741043)
chr4 (9-137)||(1044878-1045006)
chr4 (9-115)||(25446121-25446227)
chr4 (9-164)||(32683988-32684123)
chr4 (9-149)||(37046445-37046586)
chr4 (9-137)||(22202086-22202214)
chr4 (9-168)||(28483970-28484117)
chr4 (50-149)||(24736447-24736546)
chr4 (9-168)||(49834809-49834948)
chr4 (9-146)||(50018322-50018449)
chr4 (9-114)||(7249795-7249900)
chr4 (9-114)||(28541769-28541874)
chr4 (15-149)||(56445350-56445474)
chr4 (29-149)||(24130976-24131097)
chr4 (15-161)||(12913301-12913437)
chr4 (14-149)||(27454073-27454208)
chr4 (9-80)||(29649731-29649802)
chr4 (9-158)||(36479228-36479366)
chr4 (9-156)||(9163147-9163286)
chr4 (17-149)||(46635643-46635769)
chr4 (9-137)||(39307260-39307388)
chr4 (13-154)||(40537150-40537281)
chr4 (9-149)||(31314737-31314867)
chr4 (9-102)||(23465026-23465119)
chr4 (18-86)||(25504697-25504765)
chr4 (15-107)||(28371001-28371093)
chr4 (9-124)||(53275910-53276025)
chr4 (9-137)||(41581796-41581923)
chr4 (70-157)||(36727937-36728023)
chr4 (29-168)||(20021424-20021563)
chr4 (69-154)||(11090435-11090520)
[»] chr1 (45 HSPs)
chr1 (9-171)||(6312639-6312801)
chr1 (9-171)||(51701645-51701807)
chr1 (9-168)||(29396364-29396523)
chr1 (9-171)||(25612222-25612384)
chr1 (9-164)||(48177442-48177597)
chr1 (13-171)||(9322473-9322631)
chr1 (10-168)||(15835029-15835187)
chr1 (10-168)||(28387369-28387527)
chr1 (9-168)||(46328107-46328266)
chr1 (9-168)||(38536075-38536224)
chr1 (9-168)||(38558293-38558442)
chr1 (9-158)||(9577418-9577567)
chr1 (9-161)||(29219351-29219493)
chr1 (9-149)||(6304247-6304387)
chr1 (9-149)||(19451803-19451943)
chr1 (14-149)||(49198264-49198399)
chr1 (16-146)||(21222219-21222349)
chr1 (9-149)||(28824368-28824507)
chr1 (9-137)||(35279737-35279865)
chr1 (9-149)||(50192545-50192685)
chr1 (13-147)||(35679125-35679259)
chr1 (14-159)||(48668770-48668905)
chr1 (9-134)||(32588963-32589088)
chr1 (9-149)||(37014635-37014775)
chr1 (9-149)||(45760004-45760144)
chr1 (9-149)||(47780776-47780916)
chr1 (9-124)||(45536009-45536124)
chr1 (12-137)||(31572204-31572329)
chr1 (9-149)||(47654346-47654486)
chr1 (9-137)||(49418149-49418277)
chr1 (9-164)||(18798556-18798691)
chr1 (18-149)||(29556178-29556310)
chr1 (69-168)||(45272700-45272799)
chr1 (9-115)||(48524384-48524490)
chr1 (9-133)||(5495117-5495231)
chr1 (9-109)||(730214-730314)
chr1 (9-66)||(49230951-49231008)
chr1 (9-101)||(51085860-51085952)
chr1 (9-137)||(33025578-33025696)
chr1 (17-76)||(955823-955882)
chr1 (34-136)||(38319996-38320098)
chr1 (9-67)||(47784451-47784509)
chr1 (12-67)||(31622536-31622591)
chr1 (31-77)||(43885157-43885203)
chr1 (14-67)||(45272656-45272708)
[»] chr8 (38 HSPs)
chr8 (9-171)||(14782107-14782269)
chr8 (9-171)||(44725782-44725944)
chr8 (9-164)||(9288436-9288591)
chr8 (9-168)||(19717856-19718015)
chr8 (9-168)||(43166665-43166824)
chr8 (9-164)||(18958706-18958861)
chr8 (9-168)||(39467443-39467602)
chr8 (9-162)||(10295360-10295515)
chr8 (9-168)||(26856139-26856298)
chr8 (14-164)||(4403184-4403334)
chr8 (9-166)||(32497597-32497744)
chr8 (9-168)||(18305946-18306095)
chr8 (9-168)||(7466407-7466556)
chr8 (9-149)||(24501807-24501947)
chr8 (9-149)||(26374424-26374564)
chr8 (9-162)||(16362268-16362411)
chr8 (9-149)||(2704813-2704953)
chr8 (9-164)||(37857191-37857336)
chr8 (9-149)||(42937423-42937563)
chr8 (9-149)||(42938111-42938251)
chr8 (10-164)||(42305774-42305918)
chr8 (9-149)||(7506893-7507033)
chr8 (9-149)||(42735271-42735411)
chr8 (14-149)||(5576614-5576749)
chr8 (9-134)||(10392246-10392371)
chr8 (17-161)||(39189798-39189940)
chr8 (9-149)||(23115163-23115302)
chr8 (9-162)||(31623767-31623900)
chr8 (9-149)||(4950010-4950150)
chr8 (14-149)||(43959734-43959859)
chr8 (15-149)||(41479175-41479299)
chr8 (9-67)||(4031334-4031392)
chr8 (15-86)||(8410455-8410526)
chr8 (9-124)||(13478269-13478384)
chr8 (80-127)||(4031294-4031341)
chr8 (9-67)||(32711358-32711416)
chr8 (10-66)||(41070018-41070074)
chr8 (18-66)||(9770497-9770545)
[»] chr6 (17 HSPs)
chr6 (9-171)||(31895767-31895929)
chr6 (9-164)||(14262412-14262567)
chr6 (9-168)||(34759025-34759184)
chr6 (9-168)||(7497147-7497305)
chr6 (10-137)||(34773481-34773608)
chr6 (12-171)||(31067567-31067716)
chr6 (29-171)||(4200409-4200541)
chr6 (9-168)||(30385044-30385191)
chr6 (9-149)||(6197472-6197612)
chr6 (15-137)||(2300744-2300866)
chr6 (9-149)||(1391695-1391835)
chr6 (13-137)||(7051920-7052044)
chr6 (17-149)||(29076678-29076810)
chr6 (17-149)||(29111652-29111784)
chr6 (9-129)||(28002736-28002856)
chr6 (12-77)||(3848284-3848348)
chr6 (105-149)||(2238678-2238722)
[»] chr5 (25 HSPs)
chr5 (9-171)||(14000077-14000239)
chr5 (9-168)||(39852417-39852576)
chr5 (9-168)||(1152078-1152237)
chr5 (9-168)||(13926003-13926162)
chr5 (9-168)||(7947548-7947707)
chr5 (9-154)||(4550246-4550391)
chr5 (9-171)||(4240434-4240586)
chr5 (10-168)||(5949181-5949329)
chr5 (10-168)||(40013687-40013835)
chr5 (9-166)||(1461125-1461272)
chr5 (9-149)||(21147139-21147279)
chr5 (15-149)||(33656035-33656169)
chr5 (9-137)||(5272925-5273053)
chr5 (9-149)||(22746369-22746501)
chr5 (9-137)||(7016745-7016873)
chr5 (9-149)||(27458944-27459084)
chr5 (9-146)||(32157891-32158031)
chr5 (15-124)||(849225-849334)
chr5 (9-137)||(139345-139473)
chr5 (80-167)||(37014037-37014124)
chr5 (9-149)||(9689730-9689869)
chr5 (9-91)||(14465279-14465361)
chr5 (14-110)||(6460869-6460965)
chr5 (9-67)||(37013986-37014044)
chr5 (9-149)||(9220711-9220841)
[»] chr3 (61 HSPs)
chr3 (9-171)||(36674103-36674265)
chr3 (9-168)||(18749683-18749842)
chr3 (9-171)||(32580247-32580409)
chr3 (12-168)||(34484006-34484162)
chr3 (9-168)||(44906489-44906648)
chr3 (9-162)||(11431597-11431750)
chr3 (9-168)||(17946359-17946518)
chr3 (10-168)||(54628916-54629074)
chr3 (9-164)||(26107332-26107487)
chr3 (9-168)||(48379228-48379387)
chr3 (9-168)||(52810449-52810608)
chr3 (10-165)||(31646265-31646418)
chr3 (9-168)||(40897215-40897375)
chr3 (9-168)||(52617947-52618100)
chr3 (9-168)||(51737703-51737861)
chr3 (9-151)||(50903233-50903375)
chr3 (9-166)||(50762038-50762185)
chr3 (9-166)||(10728629-10728776)
chr3 (9-162)||(37454932-37455075)
chr3 (9-149)||(3206200-3206340)
chr3 (9-168)||(39038111-39038260)
chr3 (9-149)||(996081-996221)
chr3 (9-149)||(10139141-10139281)
chr3 (9-149)||(19253898-19254038)
chr3 (9-149)||(20498280-20498420)
chr3 (9-146)||(33807796-33807933)
chr3 (9-133)||(20833063-20833187)
chr3 (9-149)||(37820472-37820612)
chr3 (9-158)||(6035039-6035188)
chr3 (9-149)||(6589635-6589775)
chr3 (9-149)||(29448853-29448993)
chr3 (9-149)||(54625663-54625803)
chr3 (14-149)||(3999640-3999775)
chr3 (15-149)||(5825139-5825273)
chr3 (9-168)||(39842470-39842619)
chr3 (9-149)||(40246915-40247055)
chr3 (9-149)||(44762032-44762172)
chr3 (14-137)||(33996548-33996671)
chr3 (9-168)||(23753383-23753521)
chr3 (16-149)||(25418444-25418577)
chr3 (9-134)||(35337806-35337930)
chr3 (80-157)||(45862983-45863060)
chr3 (9-149)||(53929123-53929263)
chr3 (12-171)||(10660609-10660744)
chr3 (14-129)||(51699495-51699610)
chr3 (14-109)||(22057838-22057933)
chr3 (9-136)||(29030076-29030203)
chr3 (61-149)||(6131228-6131316)
chr3 (9-137)||(52114600-52114728)
chr3 (69-161)||(15492850-15492942)
chr3 (69-161)||(44276506-44276598)
chr3 (9-72)||(539476-539539)
chr3 (18-100)||(55235264-55235347)
chr3 (9-86)||(1440010-1440087)
chr3 (9-149)||(27899415-27899545)
chr3 (33-149)||(1439889-1440005)
chr3 (9-76)||(6975817-6975884)
chr3 (14-76)||(52080003-52080065)
chr3 (9-65)||(23535890-23535946)
chr3 (94-146)||(33807678-33807730)
chr3 (81-122)||(12103733-12103774)
[»] chr2 (36 HSPs)
chr2 (9-168)||(10657479-10657638)
chr2 (12-170)||(18177343-18177501)
chr2 (9-171)||(26788859-26789018)
chr2 (10-166)||(25288233-25288389)
chr2 (9-168)||(28844628-28844787)
chr2 (9-168)||(33135696-33135854)
chr2 (26-168)||(43078653-43078795)
chr2 (9-164)||(28740275-28740420)
chr2 (9-168)||(3463745-3463894)
chr2 (9-149)||(12407453-12407593)
chr2 (9-168)||(13833410-13833559)
chr2 (9-149)||(16269764-16269904)
chr2 (9-149)||(24776428-24776568)
chr2 (9-149)||(20605309-20605449)
chr2 (9-149)||(31170621-31170761)
chr2 (14-149)||(14198574-14198709)
chr2 (9-149)||(22551760-22551900)
chr2 (9-149)||(35317135-35317275)
chr2 (14-137)||(32125331-32125454)
chr2 (15-168)||(379016-379159)
chr2 (9-147)||(305464-305602)
chr2 (17-149)||(5093044-5093176)
chr2 (80-168)||(6224545-6224633)
chr2 (17-149)||(43847727-43847859)
chr2 (9-124)||(1789515-1789630)
chr2 (80-168)||(215216-215303)
chr2 (18-149)||(9120208-9120339)
chr2 (9-117)||(7026677-7026775)
chr2 (18-161)||(10125285-10125418)
chr2 (100-171)||(7027051-7027122)
chr2 (9-100)||(44765848-44765939)
chr2 (9-67)||(3574920-3574978)
chr2 (80-158)||(3574971-3575049)
chr2 (9-67)||(6224626-6224684)
chr2 (14-76)||(26601270-26601332)
chr2 (9-65)||(21370631-21370687)
[»] scaffold0042 (1 HSPs)
scaffold0042 (13-168)||(58052-58207)
[»] scaffold0543 (1 HSPs)
scaffold0543 (10-168)||(10633-10791)
[»] scaffold0110 (1 HSPs)
scaffold0110 (13-168)||(39593-39748)
[»] scaffold0054 (1 HSPs)
scaffold0054 (9-146)||(36905-37042)
[»] scaffold1504 (1 HSPs)
scaffold1504 (9-168)||(936-1091)
[»] scaffold0839 (1 HSPs)
scaffold0839 (38-168)||(3668-3798)
[»] scaffold0306 (1 HSPs)
scaffold0306 (9-168)||(13954-14103)
[»] scaffold0152 (2 HSPs)
scaffold0152 (9-168)||(21224-21373)
scaffold0152 (49-168)||(28463-28573)
[»] scaffold0400 (1 HSPs)
scaffold0400 (9-149)||(15028-15168)
[»] scaffold0365 (1 HSPs)
scaffold0365 (9-149)||(15671-15811)
[»] scaffold0004 (1 HSPs)
scaffold0004 (9-149)||(102167-102307)
[»] scaffold0347 (1 HSPs)
scaffold0347 (69-168)||(14892-14991)
[»] scaffold0151 (1 HSPs)
scaffold0151 (9-149)||(38600-38739)
[»] scaffold0037 (1 HSPs)
scaffold0037 (9-137)||(100283-100411)
[»] scaffold0113 (1 HSPs)
scaffold0113 (9-149)||(38890-39030)
[»] scaffold0276 (1 HSPs)
scaffold0276 (14-154)||(529-669)
[»] scaffold0922 (1 HSPs)
scaffold0922 (9-74)||(4272-4337)
[»] scaffold0007 (1 HSPs)
scaffold0007 (17-92)||(199905-199980)


Alignment Details
Target: chr7 (Bit Score: 159; Significance: 8e-85; HSPs: 62)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 159; E-Value: 8e-85
Query Start/End: Original strand, 9 - 171
Target Start/End: Original strand, 23101364 - 23101526
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23101364 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 23101463  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttactatctttt 171  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23101464 aagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttactatctttt 23101526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 159; E-Value: 8e-85
Query Start/End: Original strand, 9 - 171
Target Start/End: Original strand, 28342413 - 28342575
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28342413 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 28342512  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttactatctttt 171  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28342513 aagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttactatctttt 28342575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 154; E-Value: 7e-82
Query Start/End: Original strand, 9 - 170
Target Start/End: Original strand, 39784165 - 39784326
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    ||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39784165 gtcttgtggtattcaaaatcatttaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 39784264  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttactatcttt 170  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39784265 aagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttactatcttt 39784326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 9 - 171
Target Start/End: Complemental strand, 29614898 - 29614736
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29614898 gtcttgtgatattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 29614799  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttactatctttt 171  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  29614798 aagtctttcatgaaaagatgagatttcttgagattatttttattttaaaagttactatctttt 29614736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 9 - 168
Target Start/End: Original strand, 18838455 - 18838614
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18838455 gtcttgtggtattcaaaatcattcaaatttcgaaagattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 18838554  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttactatct 168  Q
    |||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  18838555 aagtatttcatgaaaagatgagatttcttgagattgtttttcttttaaaagttactatct 18838614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 9 - 168
Target Start/End: Original strand, 3022992 - 3023151
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3022992 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 3023091  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttactatct 168  Q
    |||| |||||||||||||||||||||||||||||||||||| |||||||||||| |||||    
T  3023092 aagtttttcatgaaaagatgagatttcttgagattgtttttcttttaaaagttagtatct 3023151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 9 - 168
Target Start/End: Original strand, 7993208 - 7993367
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    ||||| |||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||    
T  7993208 gtcttatggtattcaaaatcattcaaatttcgaaggattgtttaataaattgaattttgatggattgtgtgggattttgtagtgtaattttaacaagaaa 7993307  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttactatct 168  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||    
T  7993308 aagtctttcatgaaaagataagatttcttgagattgtttttcttttaaaagttactatct 7993367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 9 - 168
Target Start/End: Complemental strand, 9882370 - 9882212
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  9882370 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaagaagaaa 9882271  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttactatct 168  Q
    ||||||||||| |||| |||||||||||||||||||||||| |||||||||||| |||||    
T  9882270 aagtctttcat-aaaaaatgagatttcttgagattgtttttcttttaaaagttattatct 9882212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 9 - 168
Target Start/End: Complemental strand, 28034939 - 28034780
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    ||||||||||||||||||| ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  28034939 gtcttgtggtattcaaaattattcaaatttcaaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaaaaaa 28034840  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttactatct 168  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||    
T  28034839 aagtctttcatgaaaagatgagatttcttgagattgtttttcttttacaagttactatct 28034780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 9 - 168
Target Start/End: Original strand, 8675399 - 8675557
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    ||||||||||||||||||||||| ||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8675399 gtcttgtggtattcaaaatcatttaaacttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 8675498  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttactatct 168  Q
    || ||||| |||||||||||||||||||||||||||||||| |||| |||||||||||||    
T  8675499 aaatcttttatgaaaagatgagatttcttgagattgtttttctttt-aaagttactatct 8675557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 15 - 168
Target Start/End: Original strand, 33382709 - 33382862
Alignment:
Q  15 tggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtct 114  Q
    ||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33382709 tggtattcaaaatcatttaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtct 33382808  T
Q  115 ttcatgaaaagatgagatttcttgagattgtttttattttaaaagttactatct 168  Q
    || ||||||||||||||||| || ||||||||||| |||||||| |||||||||    
T  33382809 tttatgaaaagatgagatttatttagattgtttttcttttaaaatttactatct 33382862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 9 - 171
Target Start/End: Original strand, 509722 - 509874
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||          |||||||||  ||||||||||||||    
T  509722 gtcttgtggtattcaaaatcattcaaatttcgaacgattgtttaataaattggattttgatggat----------tttgtagtgggattttaacaagaaa 509811  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttactatctttt 171  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  509812 aagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttactatctttt 509874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 14 - 168
Target Start/End: Complemental strand, 44256895 - 44256741
Alignment:
Q  14 gtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtc 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||| |||||||| ||||||||||||||||||||||||     
T  44256895 gtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggatttggatgaattttgttggattttgcagtgtaattttaacaagaaaaagtt 44256796  T
Q  114 tttcatgaaaagatgagatttcttgagattgtttttattttaaaagttactatct 168  Q
    |||||| |||| ||||||||| |||||||||||||| |||||||||||| |||||    
T  44256795 tttcatcaaaatatgagattttttgagattgtttttcttttaaaagttattatct 44256741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 9 - 168
Target Start/End: Complemental strand, 40460841 - 40460692
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||          ||||||||||||||||||||    
T  40460841 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgt----------agtgtaattttaacaagaaa 40460752  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttactatct 168  Q
    || ||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||    
T  40460751 aaatctttcatgaaaatatgagatttcttgagattgtttttcttttaaaagttactatct 40460692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 29 - 168
Target Start/End: Complemental strand, 37972981 - 37972842
Alignment:
Q  29 attcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatg 128  Q
    |||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||    
T  37972981 attcaaatttcgaaggattatttaataaattggattttgatggattttgcgggattttatagtgtaattttaacaagaaaaagtctttcatgaaaagatg 37972882  T
Q  129 agatttcttgagattgtttttattttaaaagttactatct 168  Q
    ||| ||||||||||||||||| |||||||||||| |||||    
T  37972881 agacttcttgagattgtttttcttttaaaagttattatct 37972842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 29 - 168
Target Start/End: Original strand, 41827390 - 41827529
Alignment:
Q  29 attcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatg 128  Q
    ||||||| || ||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||| |||    
T  41827390 attcaaaatttgaaggattgtttaataaattggattttgatggattttgtgggattgtgtagtgtaattttaacaagaaaatgtctttcatgaaaatatg 41827489  T
Q  129 agatttcttgagattgtttttattttaaaagttactatct 168  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  41827490 agatttcttgagattgtttttcttttaaaagttactatct 41827529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 9 - 164
Target Start/End: Original strand, 12740439 - 12740593
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||| |||||||||||||||||||||||||| || ||||||||||||||| |||||||||| |||||||||||||||| ||||||||||||||||||| |    
T  12740439 gtctcgtggtattcaaaatcattcaaatttcaaaggattgtttaataaat-ggattttgatagattttgtgggattttatagtgtaattttaacaagaga 12740537  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttact 164  Q
    ||||||||||| ||||||||||||||||| ||||||||||  ||||||||||||||    
T  12740538 aagtctttcataaaaagatgagatttcttaagattgttttacttttaaaagttact 12740593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 10 - 168
Target Start/End: Complemental strand, 44122033 - 44121885
Alignment:
Q  10 tcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaa 109  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||          |||||||||||||||||||||    
T  44122033 tcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgt----------agtgtaattttaacaagaaaa 44121944  T
Q  110 agtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttactatct 168  Q
    ||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||||    
T  44121943 agtctttaatgaaaagatgagattttttgagattgtttttcttttaaaagttactatct 44121885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 9 - 168
Target Start/End: Complemental strand, 46405565 - 46405416
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||          ||||||||||||||||||    
T  46405565 gtcttgtggtattcaaaatcattcaaatttcaaatgattgtttaataaattggattttgatggattttgtgg----------tgtaattttaacaagaaa 46405476  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttactatct 168  Q
    |||| ||| || ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  46405475 aagtatttaataaaaagatgagatttcttgagattgtttttcttttaaaagttactatct 46405416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 14 - 149
Target Start/End: Original strand, 973262 - 973397
Alignment:
Q  14 gtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtc 113  Q
    ||||||||||||||||||||||||||||| |||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| ||||||||||||    
T  973262 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcaagaaaaagtc 973361  T
Q  114 tttcatgaaaagatgagatttcttgagattgttttt 149  Q
    ||||||||||| ||||||||||||  ||||||||||    
T  973362 tttcatgaaaacatgagatttcttaggattgttttt 973397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 14 - 149
Target Start/End: Complemental strand, 7719389 - 7719254
Alignment:
Q  14 gtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtc 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || |||||||||    
T  7719389 gtggtattcaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 7719290  T
Q  114 tttcatgaaaagatgagatttcttgagattgttttt 149  Q
    ||||||||||| ||||||||||||  ||||||||||    
T  7719289 tttcatgaaaacatgagatttcttaggattgttttt 7719254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 15 - 161
Target Start/End: Complemental strand, 43187485 - 43187339
Alignment:
Q  15 tggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtct 114  Q
    |||||||||||||||||||||||| |||  |||||||||||||||||||||||||| ||||||| ||||||| ||||| |||||||||||||||||||||    
T  43187485 tggtattcaaaatcattcaaattttgaagcattgtttaataaattggattttgatgaattttgtcggattttctagtgaaattttaacaagaaaaagtct 43187386  T
Q  115 ttcatgaaaagatgagatttcttgagattgtttttattttaaaagtt 161  Q
    |||||||| | ||||||||| ||| |||||||||| |||||||||||    
T  43187385 ttcatgaagacatgagattttttgggattgtttttcttttaaaagtt 43187339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 9 - 149
Target Start/End: Original strand, 47914339 - 47914479
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||| ||| ||||||||||||||||||||||||| |||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || ||||    
T  47914339 gtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaataagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 47914438  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||||||||||||||| |||||||||||| |||||||||||    
T  47914439 aagtctttcatgaaaacatgagatttcttaagattgttttt 47914479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 7718496 - 7718356
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || ||||    
T  7718496 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 7718397  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    || ||||||||||||| ||||||||||||  ||||||||||    
T  7718396 aaatctttcatgaaaacatgagatttcttaggattgttttt 7718356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 9 - 164
Target Start/End: Original strand, 29585580 - 29585725
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    ||||| |||||||||||||||||||||||| ||| ||||||||||||| ||||||||||||||||          |||||||||||||||||||||||||    
T  29585580 gtcttctggtattcaaaatcattcaaattttgaaggattgtttaataatttggattttgatggat----------tttgtagtgtaattttaacaagaaa 29585669  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttact 164  Q
    ||||||||||| ||||||||| ||||||||||||||||||| ||||||||||||||    
T  29585670 aagtctttcataaaaagatgaaatttcttgagattgtttttcttttaaaagttact 29585725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 9 - 109
Target Start/End: Original strand, 32883848 - 32883948
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  32883848 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttattaaattggattttgatggatttcgtgggattttgtagtgtaattttaacaagaaa 32883947  T
Q  109 a 109  Q
    |    
T  32883948 a 32883948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 9 - 168
Target Start/End: Original strand, 37327993 - 37328142
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    ||||||||||||||||||||||||||||||| || ||||||||||||||||| ||||||||||||          |||||||| |||||||||||| |||    
T  37327993 gtcttgtggtattcaaaatcattcaaatttcaaaggattgtttaataaattgaattttgatggat----------tttgtagtataattttaacaaaaaa 37328082  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttactatct 168  Q
    ||||||||||||||||||| |||||| |||||||||||||| ||||||||||||||||||    
T  37328083 aagtctttcatgaaaagataagattttttgagattgtttttcttttaaaagttactatct 37328142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 40996783 - 40996643
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||||||  |||||||||||||||||| ||||||| ||||| ||||||| || ||||    
T  40996783 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtaggattttctagtgaaattttagcatgaaa 40996684  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||||||||||||||| ||||||||||||  ||||||||||    
T  40996683 aagtctttcatgaaaacatgagatttcttaggattgttttt 40996643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 9 - 137
Target Start/End: Complemental strand, 43581224 - 43581096
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || ||||    
T  43581224 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 43581125  T
Q  109 aagtctttcatgaaaagatgagatttctt 137  Q
    |||||||||||||||| ||||||||||||    
T  43581124 aagtctttcatgaaaacatgagatttctt 43581096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 14 - 149
Target Start/End: Original strand, 34695351 - 34695486
Alignment:
Q  14 gtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtc 113  Q
    ||||||||||||| ||||||||||||||| |||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || |||||||||    
T  34695351 gtggtattcaaaaccattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 34695450  T
Q  114 tttcatgaaaagatgagatttcttgagattgttttt 149  Q
    ||||||||||| ||||||||||||  ||||||||||    
T  34695451 tttcatgaaaacatgagatttcttaggattgttttt 34695486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 9 - 158
Target Start/End: Original strand, 10068533 - 10068682
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||||||||||||||||||||||||||||| ||| ||||||||||||||||  ||||||||||||||||||||||||| ||||| ||||||| || ||||    
T  10068533 gtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaattaaattttgatggattttgtgggattttctagtgaaattttagcatgaaa 10068632  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaa 158  Q
    |||| |||||| |||| ||||||||| ||  |||||||||| ||||||||    
T  10068633 aagtatttcataaaaacatgagatttgttaggattgtttttcttttaaaa 10068682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 18914869 - 18914729
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||| |||||||||||||||||||||||||| || | |||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || ||||    
T  18914869 gtctagtggtattcaaaatcattcaaatttcaaaggtttgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 18914770  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||||||||||||||| ||||||||||||  ||||||||||    
T  18914769 aagtctttcatgaaaacatgagatttcttaggattgttttt 18914729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 9 - 149
Target Start/End: Original strand, 30440869 - 30441009
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||||||  |||||||||||||||||||||||||| ||||| |||||||  | ||||    
T  30440869 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagtatgaaa 30440968  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    ||||||||| |||||| ||||||||||||  ||||||||||    
T  30440969 aagtctttcgtgaaaacatgagatttcttaggattgttttt 30441009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 14 - 149
Target Start/End: Complemental strand, 32143046 - 32142911
Alignment:
Q  14 gtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtc 113  Q
    ||||||||||||||||||||||||| ||| |||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || |||||||||    
T  32143046 gtggtattcaaaatcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 32142947  T
Q  114 tttcatgaaaagatgagatttcttgagattgttttt 149  Q
    || ||| |||| |||||||||||| |||||||||||    
T  32142946 ttccataaaaacatgagatttcttaagattgttttt 32142911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 14 - 149
Target Start/End: Complemental strand, 44343525 - 44343390
Alignment:
Q  14 gtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtc 113  Q
    |||||||| |||||||||||||||||||| |||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || |||||||||    
T  44343525 gtggtatttaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 44343426  T
Q  114 tttcatgaaaagatgagatttcttgagattgttttt 149  Q
    ||||| ||||| ||||||||||||  ||||||||||    
T  44343425 tttcacgaaaacatgagatttcttaggattgttttt 44343390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 15 - 149
Target Start/End: Original strand, 12893487 - 12893621
Alignment:
Q  15 tggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtct 114  Q
    ||||||||||||||||||||||||||||  ||||||||||||||  ||||||||||||||||||| |||||| ||||| ||||||| || ||||||||||    
T  12893487 tggtattcaaaatcattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtgagattttctagtgaaattttagcatgaaaaagtct 12893586  T
Q  115 ttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||||||||| ||||||||||||  ||||||||||    
T  12893587 ttcatgaaaacatgagatttcttaggattgttttt 12893621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 9 - 137
Target Start/End: Complemental strand, 20275397 - 20275269
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    ||||| |||||||||||||||||||||||||||| |||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || ||||    
T  20275397 gtcttatggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaa 20275298  T
Q  109 aagtctttcatgaaaagatgagatttctt 137  Q
    |||||| ||||||||  ||||||||||||    
T  20275297 aagtctgtcatgaaagcatgagatttctt 20275269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 9 - 168
Target Start/End: Original strand, 39028163 - 39028312
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||||||| ||||||||||| |||||||| |||| ||||||||||||||||||||||||||||||          |||||||||||| ||||||||||||    
T  39028163 gtcttgtgttattcaaaatcgttcaaattacgaaagattgtttaataaattggattttgatggat----------tttgtagtgtaactttaacaagaaa 39028252  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttactatct 168  Q
    |||| |||||||||||   |||||||||||||||||||||| ||||||||||||||||||    
T  39028253 aagtttttcatgaaaaacagagatttcttgagattgtttttcttttaaaagttactatct 39028312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 9 - 149
Target Start/End: Original strand, 47879241 - 47879381
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||| ||| |||||||||||||||||||||  || |||||||||||||||  |||||||||||||||||||| ||||| ||||| ||||||| || ||||    
T  47879241 gtctagtgatattcaaaatcattcaaatttaaaaggattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaa 47879340  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||||||||||||||| |||||||||||| |||||||||||    
T  47879341 aagtctttcatgaaaacatgagatttcttaagattgttttt 47879381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 15 - 149
Target Start/End: Complemental strand, 39219504 - 39219371
Alignment:
Q  15 tggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtct 114  Q
    |||||||||||||||||||||||| || ||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || ||||||||||    
T  39219504 tggtattcaaaatcattcaaattttga-tgattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtct 39219406  T
Q  115 ttcatgaaaagatgagatttcttgagattgttttt 149  Q
    ||||| |||| ||||||||||||  ||||||||||    
T  39219405 ttcataaaaacatgagatttcttaggattgttttt 39219371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 9 - 158
Target Start/End: Original strand, 12963767 - 12963911
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||| ||||||| ||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||| ||||| |||||||  ||||||    
T  12963767 gtctcgtggtatccaaaatcattcaaatttcgaaggattgtttaataaattagattttgatggattttgtgggattttctagtgaaattttagtaagaaa 12963866  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaa 158  Q
    ||||||||  |      |||||||||||||||||||||||| ||||||||    
T  12963867 aagtctttttt-----catgagatttcttgagattgtttttcttttaaaa 12963911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 14 - 149
Target Start/End: Original strand, 34009091 - 34009226
Alignment:
Q  14 gtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtc 113  Q
    ||||||||||||||||||||||||||||| |||||||||||||||  |||||||||||||||||||| ||||| || |  ||||||| ||  ||||||||    
T  34009091 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtggaattttctaataaaattttagcataaaaaagtc 34009190  T
Q  114 tttcatgaaaagatgagatttcttgagattgttttt 149  Q
    ||||| ||||| ||||||||||||  ||||||||||    
T  34009191 tttcaagaaaacatgagatttcttaggattgttttt 34009226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 9 - 134
Target Start/End: Complemental strand, 33892384 - 33892269
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||          | |||||||||||||||||||||||||||    
T  33892384 gtcttgtggtattcaaaatcattcaaatttcgaatgattgttaaataaattggatttttat----------gaattttgtagtgtaattttaacaagaaa 33892295  T
Q  109 aagtctttcatgaaaagatgagattt 134  Q
    ||||||||||| ||||||||||||||    
T  33892294 aagtctttcattaaaagatgagattt 33892269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 14 - 114
Target Start/End: Original strand, 43679492 - 43679592
Alignment:
Q  14 gtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtc 113  Q
    ||||||||||||||||||||||||||||| |||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || |||||||||    
T  43679492 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 43679591  T
Q  114 t 114  Q
    |    
T  43679592 t 43679592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 14 - 149
Target Start/End: Original strand, 7113530 - 7113665
Alignment:
Q  14 gtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtc 113  Q
    |||||||||||||| |||||||||||| | |||||||||||||||  ||||||||| |||||||||||||||| |||   ||||||| || |||||||||    
T  7113530 gtggtattcaaaataattcaaatttcgcaggattgtttaataaatcagattttgatagattttgtgggattttctaggaaaattttagcatgaaaaagtc 7113629  T
Q  114 tttcatgaaaagatgagatttcttgagattgttttt 149  Q
    ||||||||||| |||| |||||||  ||||||||||    
T  7113630 tttcatgaaaacatgaaatttcttaggattgttttt 7113665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 18 - 150
Target Start/End: Original strand, 19810874 - 19810996
Alignment:
Q  18 tattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttc 117  Q
    |||||||||||||||||||||| ||||||||||||||||||||||          |||||||| ||||| ||||| ||||||| ||  |||| |||||||    
T  19810874 tattcaaaatcattcaaatttcaaatgattgtttaataaattgga----------ttttgtggaattttctagtgaaattttagcataaaaatgtctttc 19810963  T
Q  118 atgaaaagatgagatttcttgagattgttttta 150  Q
    ||||||| |||||||||||||||||||||||||    
T  19810964 atgaaaacatgagatttcttgagattgttttta 19810996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 12 - 113
Target Start/End: Original strand, 25805761 - 25805862
Alignment:
Q  12 ttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaag 111  Q
    ||||||||||||||||||||||||||||| | ||||||||||||||||| ||| ||||||||||||||||||||| || |  ||||||| || |||||||    
T  25805761 ttgtggtattcaaaatcattcaaatttcgtaggattgtttaataaattgaattatgatggattttgtgggattttctaataaaattttagcatgaaaaag 25805860  T
Q  112 tc 113  Q
    ||    
T  25805861 tc 25805862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 9 - 76
Target Start/End: Original strand, 19251605 - 19251672
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggatttt 76  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  19251605 gtctcgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggatttt 19251672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 17 - 103
Target Start/End: Complemental strand, 10676546 - 10676460
Alignment:
Q  17 gtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaaca 103  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||| ||| ||||| | ||| ||||||||||    
T  10676546 gtattcaaaatcattcaaatttcgaaggattgtttaataaattggatttggatggattttatggaattttcttgtgaaattttaaca 10676460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 80 - 149
Target Start/End: Complemental strand, 17001106 - 17001037
Alignment:
Q  80 ggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  17001106 ggattttgtagtgtaattataacaagaaaaagtctttcatgaaaatatgagatttcttgatattgttttt 17001037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 9 - 140
Target Start/End: Original strand, 47066770 - 47066881
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||                    |||||||||||||||||||||||||    
T  47066770 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggat--------------------tttgtagtgtaattttaacaagaaa 47066849  T
Q  109 aagtctttcatgaaaagatgagatttcttgag 140  Q
    || | |||||||||||||||||||||||||||    
T  47066850 aaatatttcatgaaaagatgagatttcttgag 47066881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 12 - 73
Target Start/End: Original strand, 447852 - 447913
Alignment:
Q  12 ttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggat 73  Q
    |||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  447852 ttgtggtatttaaaatcattcaaatttcgaatgattgtttaattaattggattttgatggat 447913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 9 - 76
Target Start/End: Original strand, 31638948 - 31639015
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggatttt 76  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||    
T  31638948 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggatttt 31639015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 9 - 158
Target Start/End: Complemental strand, 3797191 - 3797052
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||||||||||||||| |||||| |||||| ||| |||||||||||||||| ||||||||         ||||||||| ||||| ||||||| || ||||    
T  3797191 gtcttgtggtattcaagatcattaaaattttgaaggattgtttaataaattagattttga---------tgggattttctagtgaaattttagcatgaaa 3797101  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaa 158  Q
    |||||||| | ||||| || |||||||||  |||||||||| ||||||||    
T  3797100 aagtcttttaagaaaacat-agatttcttaggattgtttttcttttaaaa 3797052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 9 - 149
Target Start/End: Original strand, 9179946 - 9180076
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||||||||||| |||||||| | ||||| |||| |||||||||||||||||||          |||||||||||||| ||||| | ||||| ||  |||    
T  9179946 gtcttgtggtatacaaaatcacttaaattccgaaggattgtttaataaattgga----------ttttgtgggattttctagtgaatttttagcataaaa 9180035  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||||||||||||||| ||||||||||||  ||||||||||    
T  9180036 aagtctttcatgaaaacatgagatttcttaggattgttttt 9180076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 14 - 67
Target Start/End: Complemental strand, 17001152 - 17001099
Alignment:
Q  14 gtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttg 67  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  17001152 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 17001099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 17 - 124
Target Start/End: Original strand, 727594 - 727691
Alignment:
Q  17 gtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtcttt 116  Q
    ||||||||||||||||||||||| || |||||||||||||||  ||||          |||||||||||| ||||| ||||||| || ||||||||||||    
T  727594 gtattcaaaatcattcaaatttcaaaggattgtttaataaatcagatt----------ttgtgggattttctagtgaaattttagcatgaaaaagtcttt 727683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 49 - 158
Target Start/End: Original strand, 10617024 - 10617134
Alignment:
Q  49 tttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat-gagatttcttgagattgttt 147  Q
    ||||||||||| ||||||||||||||||||| |||||| |||||  ||||||  || || ||||||||||| |||| ||  |||||| ||| ||||| ||    
T  10617024 tttaataaattagattttgatggattttgtgagattttctagtgatattttagtaataacaagtctttcataaaaacataaagattttttgggattgctt 10617123  T
Q  148 ttattttaaaa 158  Q
    || ||||||||    
T  10617124 ttcttttaaaa 10617134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 120 - 166
Target Start/End: Original strand, 32883944 - 32883990
Alignment:
Q  120 gaaaagatgagatttcttgagattgtttttattttaaaagttactat 166  Q
    ||||||||||||||| |||||||||||||| ||||||||||||||||    
T  32883944 gaaaagatgagatttattgagattgtttttcttttaaaagttactat 32883990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 12 - 86
Target Start/End: Complemental strand, 1470364 - 1470291
Alignment:
Q  12 ttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggatttt 86  Q
    ||||||||||||||||| |||||||||  ||  |||||||||| |||| ||||||||| | ||||||||||||||    
T  1470364 ttgtggtattcaaaatcgttcaaattttaaagcattgtttaatgaattagattttgatag-ttttgtgggatttt 1470291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 131 - 168
Target Start/End: Original strand, 29893173 - 29893210
Alignment:
Q  131 atttcttgagattgtttttattttaaaagttactatct 168  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  29893173 atttcttgagattgtttttcttttaaaagttactatct 29893210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 67
Target Start/End: Complemental strand, 44623410 - 44623352
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttg 67  Q
    |||| ||| |||||||||||||||| ||||| || || |||||||||||||| ||||||    
T  44623410 gtctcgtgatattcaaaatcattcatatttctaaagactgtttaataaattgaattttg 44623352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 159; Significance: 8e-85; HSPs: 61)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 159; E-Value: 8e-85
Query Start/End: Original strand, 9 - 171
Target Start/End: Original strand, 5441475 - 5441637
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5441475 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 5441574  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttactatctttt 171  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5441575 aagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttactatctttt 5441637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 159; E-Value: 8e-85
Query Start/End: Original strand, 9 - 171
Target Start/End: Original strand, 27768127 - 27768289
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27768127 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 27768226  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttactatctttt 171  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27768227 aagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttactatctttt 27768289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 9 - 171
Target Start/End: Original strand, 54341215 - 54341377
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54341215 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 54341314  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttactatctttt 171  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  54341315 aagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttactatttttt 54341377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 9 - 171
Target Start/End: Complemental strand, 37828537 - 37828375
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  37828537 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaaaaagaaa 37828438  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttactatctttt 171  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  37828437 aagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaaattactatctttt 37828375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 9 - 171
Target Start/End: Original strand, 48261198 - 48261360
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48261198 gtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 48261297  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttactatctttt 171  Q
    || ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  48261298 aaatctttcatgaaaatatgagatttcttgagattgtttttattttaaaagttactatctttt 48261360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 9 - 168
Target Start/End: Original strand, 37915898 - 37916057
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  37915898 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtacttttaacaagaaa 37915997  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttactatct 168  Q
    ||||| ||||||||||||| |||||| |||||||||||||| ||||||||||||||||||    
T  37915998 aagtcattcatgaaaagataagatttattgagattgtttttcttttaaaagttactatct 37916057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 9 - 168
Target Start/End: Original strand, 51320992 - 51321151
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||  ||||| |||||||||||||||||||||    
T  51320992 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgtaattttatagtgtaattttaacaagaaa 51321091  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttactatct 168  Q
    |||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  51321092 aagtttttcatgaaaagatgagatttcttgagattgtttttcttttaaaagttactatct 51321151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 9 - 164
Target Start/End: Complemental strand, 54853603 - 54853448
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    ||||||||||||||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54853603 gtcttgtggtattcaaaattattcaaatttcaaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 54853504  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttact 164  Q
    || |||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  54853503 aaatctttcatgaaaagatgagatttcttgagattgtttttcttttaaaagttact 54853448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 9 - 162
Target Start/End: Original strand, 32322162 - 32322315
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||    
T  32322162 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaataagaaa 32322261  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagtta 162  Q
    | ||||||||| ||||||||||||||||||||||||||||| |||||| |||||    
T  32322262 atgtctttcataaaaagatgagatttcttgagattgtttttcttttaatagtta 32322315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 9 - 168
Target Start/End: Original strand, 23987285 - 23987434
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||          |||||||||||||||||||||||||    
T  23987285 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattagattttgatggat----------tttgtagtgtaattttaacaagaaa 23987374  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttactatct 168  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  23987375 aagtctttcatgaaaagatgagatttcttgagattgtttttcttttaaaagttactatct 23987434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 9 - 171
Target Start/End: Original strand, 41725196 - 41725352
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||||||| ||||||||||||||||||||| ||| ||||||||||   |||||||||||||| ||||||||||||||| |||||||||||||||||||||    
T  41725196 gtcttgtgatattcaaaatcattcaaattttgaaggattgtttaa---attggattttgatgaattttgtgggattttatagtgtaattttaacaagaaa 41725292  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttactatctttt 171  Q
    || |||||||||||||||||||||||||||   ||| ||||||||||||||||||||||||||    
T  41725293 aaatctttcatgaaaagatgagatttcttg---ttggttttattttaaaagttactatctttt 41725352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 9 - 168
Target Start/End: Complemental strand, 30967434 - 30967285
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    ||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||          |||||||||||||||||||||||||||||||    
T  30967434 gtcttgtggtattcaaaatcattcaaatttcaaaggattgtttaataaattggattttg----------tgggattttgtagtgtaattttaacaagaaa 30967345  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttactatct 168  Q
    || ||||||||||||| || ||||||||||||||||||||| ||||||||||||||||||    
T  30967344 aaatctttcatgaaaaaataagatttcttgagattgttttttttttaaaagttactatct 30967285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 34228718 - 34228578
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||| |||||||||||||||||| ||||||||||||||||||||||||||  |||||||||||||||||| ||||||| ||||| ||||||| || ||||    
T  34228718 gtctagtggtattcaaaatcattgaaatttcgaatgattgtttaataaatcagattttgatggattttgtaggattttctagtgaaattttagcatgaaa 34228619  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||||||||||||||| |||||||||||| |||||||||||    
T  34228618 aagtctttcatgaaaacatgagatttcttaagattgttttt 34228578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 14 - 149
Target Start/End: Complemental strand, 41881212 - 41881077
Alignment:
Q  14 gtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtc 113  Q
    ||||||||||||||||||||||||||||| |||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || |||||||||    
T  41881212 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 41881113  T
Q  114 tttcatgaaaagatgagatttcttgagattgttttt 149  Q
    ||||||||||| ||||||||||||  ||||||||||    
T  41881112 tttcatgaaaacatgagatttcttaggattgttttt 41881077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 9 - 168
Target Start/End: Complemental strand, 49501646 - 49501495
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||          ||| |||||||||||||||||||||||||||    
T  49501646 gtcttgtggcattcaaaatcattcaaatttcgaatgattgtttaataaattggattttg----------tggaattttgtagtgtaattttaacaagaaa 49501557  T
Q  109 aagtctttc--atgaaaagatgagatttcttgagattgtttttattttaaaagttactatct 168  Q
    |||||||||  || ||||||||||||||||||||||||||||| |||||||||||| |||||    
T  49501556 aagtctttcatataaaaagatgagatttcttgagattgtttttcttttaaaagttattatct 49501495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 9 - 168
Target Start/End: Complemental strand, 49507711 - 49507560
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||          ||| |||||||||||||||||||||||||||    
T  49507711 gtcttgtggcattcaaaatcattcaaatttcgaatgattgtttaataaattggattttg----------tggaattttgtagtgtaattttaacaagaaa 49507622  T
Q  109 aagtctttc--atgaaaagatgagatttcttgagattgtttttattttaaaagttactatct 168  Q
    |||||||||  || ||||||||||||||||||||||||||||| |||||||||||| |||||    
T  49507621 aagtctttcatataaaaagatgagatttcttgagattgtttttcttttaaaagttattatct 49507560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 9 - 146
Target Start/End: Original strand, 55302914 - 55303051
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||||||  ||||||||||||| |||||||||||| ||||| ||||||| || ||||    
T  55302914 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggatattgtgggattttctagtgaaattttagcatgaaa 55303013  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgtt 146  Q
    |||||||||||||||| |||||||||||| ||||||||    
T  55303014 aagtctttcatgaaaacatgagatttcttaagattgtt 55303051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 9 - 149
Target Start/End: Original strand, 1112964 - 1113104
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||| |||||||||||||||||||||||||| ||||||||||||||||||  |||||||||||||||||||||||||  ||||  |||||||||| ||||    
T  1112964 gtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagattttgatggattttgtgggatttcctagtaaaattttaacatgaaa 1113063  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||||||||||||||| ||||||||||||  ||||||||||    
T  1113064 aagtctttcatgaaaacatgagatttcttaggattgttttt 1113104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 15 - 149
Target Start/End: Original strand, 12113022 - 12113156
Alignment:
Q  15 tggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtct 114  Q
    |||||||||||||||||||||||||||| |||||||||||||||  |||||| ||||||||||||| ||||| ||||| ||||||| || ||||||||||    
T  12113022 tggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttaatggattttgtggaattttctagtgaaattttagcatgaaaaagtct 12113121  T
Q  115 ttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||||||||| ||||||||||||| ||||||||||    
T  12113122 ttcatgaaaacatgagatttcttgggattgttttt 12113156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 11 - 149
Target Start/End: Complemental strand, 39479488 - 39479350
Alignment:
Q  11 cttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaa 110  Q
    ||||||||||||||||||||||||||||||||  ||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || ||||||    
T  39479488 cttgtggtattcaaaatcattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcaggaaaaa 39479389  T
Q  111 gtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||||||||||||  ||||||||||||  ||||||||||    
T  39479388 gtctttcatgaaagcatgagatttcttaggattgttttt 39479350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 9 - 168
Target Start/End: Original strand, 5800049 - 5800198
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    ||||||||||||||||||||||||||||||| || |||||||||||||||||||          ||||||| |||||||||| |||||||||||||||||    
T  5800049 gtcttgtggtattcaaaatcattcaaatttcaaaggattgtttaataaattgga----------ttttgtgagattttgtagagtaattttaacaagaaa 5800138  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttactatct 168  Q
    |||||||| |||||||||| |||||| |||||||||||||| |||||||||||| |||||    
T  5800139 aagtctttaatgaaaagataagattttttgagattgtttttcttttaaaagttattatct 5800198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 9 - 149
Target Start/End: Original strand, 25331202 - 25331342
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||| ||| |||||||||||||||||||||| || |||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || ||||    
T  25331202 gtctagtgatattcaaaatcattcaaatttcaaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 25331301  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||||||||||||||| ||||||||||||  ||||||||||    
T  25331302 aagtctttcatgaaaacatgagatttcttaggattgttttt 25331342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 30009812 - 30009672
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||| |||||||||||||||||| ||||||  ||||||||||||||||||  |||||||||||||||||||||||||| ||||  ||||||| || ||||    
T  30009812 gtctagtggtattcaaaatcatttaaattttaaatgattgtttaataaatcagattttgatggattttgtgggattttctagtaaaattttagcatgaaa 30009713  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||||||||||||||| |||||||||||| |||||||||||    
T  30009712 aagtctttcatgaaaacatgagatttcttaagattgttttt 30009672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 32950971 - 32950831
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||||||  |||||||||| ||||||||||||||| ||||| ||||||| || ||||    
T  32950971 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatgaattttgtgggattttctagtgaaattttagcatgaaa 32950872  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    || ||||||||||||| |||||||||||| ||||| |||||    
T  32950871 aattctttcatgaaaacatgagatttcttaagatttttttt 32950831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 15 - 137
Target Start/End: Original strand, 3436670 - 3436792
Alignment:
Q  15 tggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtct 114  Q
    |||||||||||||||||||||||||||| |||||||||||||||  |||||||||| ||||||||||||||||||||| |||||||||| |||||||| |    
T  3436670 tggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatgaattttgtgggattttgtagtgaaattttaacatgaaaaagttt 3436769  T
Q  115 ttcatgaaaagatgagatttctt 137  Q
    |||||||||| || |||||||||    
T  3436770 ttcatgaaaacataagatttctt 3436792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 9 - 149
Target Start/End: Original strand, 7007445 - 7007585
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||||||  |||||||||| ||||||||||||||| ||||| ||||||| || ||||    
T  7007445 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatgaattttgtgggattttctagtgaaattttagcatgaaa 7007544  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |  | ||||||||||| |||||||||||| |||||||||||    
T  7007545 atttttttcatgaaaacatgagatttcttaagattgttttt 7007585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 50 - 158
Target Start/End: Original strand, 8711978 - 8712086
Alignment:
Q  50 ttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    ||||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||||||||||||| |||| ||||||||||||||||||||||||    
T  8711978 ttaataaattggattttgatggattttgtgggattttatagtgaaattttagcaagaaaaagtctttcatcaaaacatgagatttcttgagattgttttt 8712077  T
Q  150 attttaaaa 158  Q
     ||||||||    
T  8712078 cttttaaaa 8712086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 9 - 149
Target Start/End: Original strand, 41320881 - 41321021
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||||||||| || ||||| |||||||  | ||||    
T  41320881 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggatgttctagtgaaattttagtatgaaa 41320980  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    ||||||||||| |||| |||||||||||| |||||| ||||    
T  41320981 aagtctttcataaaaacatgagatttcttaagattgatttt 41321021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 9 - 149
Target Start/End: Original strand, 42786755 - 42786895
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||||||   ||||||||||||||||||| ||||| ||||| ||||||| ||  |||    
T  42786755 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcatattttgatggattttgtggaattttctagtgaaattttatcataaaa 42786854  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||||||||||||||| ||||||||||||  ||||||||||    
T  42786855 aagtctttcatgaaaacatgagatttcttatgattgttttt 42786895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 15 - 135
Target Start/End: Complemental strand, 44770982 - 44770862
Alignment:
Q  15 tggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtct 114  Q
    |||||||||||||||||||||||| ||| |||||||||||||||||||||||| |||||||||||||||||| ||||| |||||||| ||||||||||||    
T  44770982 tggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttggtggattttgtgggattttctagtgaaattttaagaagaaaaagtct 44770883  T
Q  115 ttcatgaaaagatgagatttc 135  Q
    |||||||  | ||||||||||    
T  44770882 ttcatgacgacatgagatttc 44770862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 9 - 123
Target Start/End: Complemental strand, 19741043 - 19740929
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    ||||||||||||| |||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||| ||||| ||||||| |  ||||    
T  19741043 gtcttgtggtattaaaaatcattcaaatttcgaaggattgtttaataaattagattttgatggattttgtgggattttctagtgaaattttagcttgaaa 19740944  T
Q  109 aagtctttcatgaaa 123  Q
    |||||||||||||||    
T  19740943 aagtctttcatgaaa 19740929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 9 - 137
Target Start/End: Original strand, 1044878 - 1045006
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||| ||||||||||||| ||||||| ||||||| |||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || ||||    
T  1044878 gtctagtggtattcaaaaccattcaactttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 1044977  T
Q  109 aagtctttcatgaaaagatgagatttctt 137  Q
    |||||||||||||||| || |||||||||    
T  1044978 aagtctttcatgaaaacataagatttctt 1045006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 9 - 115
Target Start/End: Original strand, 25446121 - 25446227
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || ||||    
T  25446121 gtctagtggtattcaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaa 25446220  T
Q  109 aagtctt 115  Q
    |||||||    
T  25446221 aagtctt 25446227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 9 - 164
Target Start/End: Complemental strand, 32684123 - 32683988
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||                    ||||||||||||||||||||||||    
T  32684123 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggatt--------------------ttgtagtgtaattttaacaagaaa 32684044  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttact 164  Q
    |||||||||||||||||||||||||| |||||||||||||| ||||||||||||||    
T  32684043 aagtctttcatgaaaagatgagatttattgagattgtttttcttttaaaagttact 32683988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 37046586 - 37046445
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtg-taattttaacaagaa 107  Q
    |||| ||| |||| |||||||||||||||||||| |||||||||||||||  |||||||||||||||||||| ||||| |||||  ||||||| || |||    
T  37046586 gtctagtgatatttaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtggaattttctagtgaaaattttagcatgaa 37046487  T
Q  108 aaagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    ||||||||||||||||| ||||||||||||  ||||||||||    
T  37046486 aaagtctttcatgaaaatatgagatttcttaggattgttttt 37046445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 9 - 137
Target Start/End: Original strand, 22202086 - 22202214
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||| |||||||||||||||||| ||||||| || |||||||||||||||   ||||||||||||||||||||||||| ||||| ||||||| || ||||    
T  22202086 gtctagtggtattcaaaatcattaaaatttcaaaagattgtttaataaataaaattttgatggattttgtgggattttctagtgaaattttagcatgaaa 22202185  T
Q  109 aagtctttcatgaaaagatgagatttctt 137  Q
    |||||||||||||||| || |||||||||    
T  22202186 aagtctttcatgaaaacattagatttctt 22202214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 9 - 168
Target Start/End: Original strand, 28483970 - 28484117
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||| ||||||||||||||||||||||||||||| |||| |||||||||||||||||||          | ||||||||||||||||||| |||||||||    
T  28483970 gtctcgtggtattcaaaatcattcaaatttcgaaggattatttaataaattggattttg----------taggattttgtagtgtaattt-aacaagaaa 28484058  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttactatct 168  Q
    |||||||||||||||||| |||||||||| ||||| ||||| |||||||| |||||||||    
T  28484059 aagtctttcatgaaaagacgagatttcttaagattatttttcttttaaaa-ttactatct 28484117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 50 - 149
Target Start/End: Original strand, 24736447 - 24736546
Alignment:
Q  50 ttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||||||||||||||||||||||||||||| |||||| ||||| |||||||||||||| |||||||||||||||| ||||||||||||| ||||||||||    
T  24736447 ttaataaattggattttgatggattttgtgagattttctagtgaaattttaacaagaagaagtctttcatgaaaacatgagatttcttgtgattgttttt 24736546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 9 - 168
Target Start/End: Complemental strand, 49834948 - 49834809
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||                    |||||||||||||||||||||||     
T  49834948 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggatt--------------------ttgtagtgtaattttaacaagaag 49834869  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttactatct 168  Q
    ||||||||||| ||||||||||||||||||||||||||||| | ||||||||||||||||    
T  49834868 aagtctttcattaaaagatgagatttcttgagattgtttttctattaaaagttactatct 49834809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 9 - 146
Target Start/End: Original strand, 50018322 - 50018449
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||||||||||||||| ||||||||||||| ||| ||||||||||||||||| ||||| ||||||          |||||||||||||||||||||||||    
T  50018322 gtcttgtggtattcaagatcattcaaattttgaaggattgtttaataaattgaattttaatggat----------tttgtagtgtaattttaacaagaaa 50018411  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgtt 146  Q
    |||||||||| ||||||||||||||| |||||||||||    
T  50018412 aagtctttcaagaaaagatgagatttattgagattgtt 50018449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 9 - 114
Target Start/End: Complemental strand, 7249900 - 7249795
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || ||||    
T  7249900 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 7249801  T
Q  109 aagtct 114  Q
    ||||||    
T  7249800 aagtct 7249795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 9 - 114
Target Start/End: Original strand, 28541769 - 28541874
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||| ||||| ||||| ||||||| || ||||    
T  28541769 gtctagtggtattcaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaa 28541868  T
Q  109 aagtct 114  Q
    ||||||    
T  28541869 aagtct 28541874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 15 - 149
Target Start/End: Complemental strand, 56445474 - 56445350
Alignment:
Q  15 tggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtct 114  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||          ||||||||||||| ||||| || |||| |||||||||||||    
T  56445474 tggtattcaaaatcattcaaatttcgaatgattgtttaataaattggat----------tttgtgggattttctagtgaaactttagcaagaaaaagtct 56445385  T
Q  115 ttcatgaaaagatgagatttcttgagattgttttt 149  Q
    ||||| || | ||||||||||||||||||||||||    
T  56445384 ttcataaagacatgagatttcttgagattgttttt 56445350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 29 - 149
Target Start/End: Complemental strand, 24131097 - 24130976
Alignment:
Q  29 attcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaag-aaaaagtctttcatgaaaagat 127  Q
    ||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||| |||||||  | | ||||| ||||||||||||| ||    
T  24131097 attcaaatttcgaatgattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttaggatgaaaaaaatctttcatgaaaacat 24130998  T
Q  128 gagatttcttgagattgttttt 149  Q
    ||||||||||  ||||||||||    
T  24130997 gagatttcttaggattgttttt 24130976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 15 - 161
Target Start/End: Original strand, 12913301 - 12913437
Alignment:
Q  15 tggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtct 114  Q
    |||||||||||||||||||||||| ||| |||||||||||||||||||          |||||||||||||| ||||| ||||||||||||||||||| |    
T  12913301 tggtattcaaaatcattcaaattttgaaggattgtttaataaattgga----------ttttgtgggattttctagtgaaattttaacaagaaaaagtat 12913390  T
Q  115 ttcatgaaaagatgagatttcttgagattgtttttattttaaaagtt 161  Q
    |||||||| | |||||||||||||  ||| ||||| |||||||||||    
T  12913391 ttcatgaagacatgagatttcttggaattatttttcttttaaaagtt 12913437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 14 - 149
Target Start/End: Complemental strand, 27454208 - 27454073
Alignment:
Q  14 gtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtc 113  Q
    ||||||||||||||||||||||||| ||| |||| ||||||||||  |||||||||| ||||||||| ||||| ||||| ||||||  || |||||||||    
T  27454208 gtggtattcaaaatcattcaaattttgaaagattatttaataaatcagattttgatgaattttgtggaattttctagtgaaattttggcatgaaaaagtc 27454109  T
Q  114 tttcatgaaaagatgagatttcttgagattgttttt 149  Q
    ||||||||||| || | |||| || |||||||||||    
T  27454108 tttcatgaaaacataatatttgttaagattgttttt 27454073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 9 - 80
Target Start/End: Complemental strand, 29649802 - 29649731
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgg 80  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  29649802 gtcttgtggtattcaaaatcattcaaatttcgaaagattgtttaataaattggattttgatggattttgtgg 29649731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 9 - 158
Target Start/End: Complemental strand, 36479366 - 36479228
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||| |||||||||||||| |||||||||||||| |||| ||||||||||||||||||||||||||||           ||||| ||||||| ||| |||    
T  36479366 gtctcgtggtattcaaaattattcaaatttcgaaggattatttaataaattggattttgatggatttt-----------tagtgaaattttagcaaaaaa 36479278  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaa 158  Q
    |||||||| ||||||| |||||||||||||||||| ||||| ||||||||    
T  36479277 aagtcttttatgaaaacatgagatttcttgagattatttttcttttaaaa 36479228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 9 - 156
Target Start/End: Original strand, 9163147 - 9163286
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||||||| ||||||||||||||||||||||||| ||||||||||||||||  ||||||||||||||||||| ||||| ||||| ||||||| || |||     
T  9163147 gtcttgtgatattcaaaatcattcaaatttcgaaggattgtttaataaattaaattttgatggattttgtggaattttctagtgaaattttagcatgaa- 9163245  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgtttttattttaa 156  Q
           ||||||||| ||||||||||||  |||||||||| ||||||    
T  9163246 -------tcatgaaaacatgagatttcttatgattgttttttttttaa 9163286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 17 - 149
Target Start/End: Complemental strand, 46635769 - 46635643
Alignment:
Q  17 gtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtcttt 116  Q
    |||||||||||||||||||||||||| |||||||||||||||  ||||      |||||||||||||||| ||||| ||||||| || ||||||||||||    
T  46635769 gtattcaaaatcattcaaatttcgaaggattgtttaataaataagatt------gattttgtgggattttttagtgaaattttagcatgaaaaagtcttt 46635676  T
Q  117 catgaaaagatgagatttcttgagattgttttt 149  Q
    ||| |||| ||||||||||||  ||||||||||    
T  46635675 cataaaaacatgagatttcttaggattgttttt 46635643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 9 - 137
Target Start/End: Complemental strand, 39307388 - 39307260
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    ||||||||||||||| ||||||||||||||| || |||| |||||| |||||  |||||||| ||||||||||||||| ||||| |||||||||| ||||    
T  39307388 gtcttgtggtattcataatcattcaaatttctaaagattatttaatgaattgagttttgatgaattttgtgggattttctagtgaaattttaacatgaaa 39307289  T
Q  109 aagtctttcatgaaaagatgagatttctt 137  Q
    |||| | | || |||| ||||||||||||    
T  39307288 aagtttctgataaaaacatgagatttctt 39307260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 13 - 154
Target Start/End: Complemental strand, 40537281 - 40537150
Alignment:
Q  13 tgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagt 112  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||  |||||||||||||||||||          ||| ||||||| || ||||||||    
T  40537281 tgtggtattcaaaatcatttaaatttcgaatgattgtttaataaatctgattttgatggattttgtg----------gtgaaattttagcatgaaaaagt 40537192  T
Q  113 ctttcatgaaaagatgagatttcttgagattgtttttatttt 154  Q
    |||||||||||| ||||||||||||  |||| ||||| ||||    
T  40537191 ctttcatgaaaacatgagatttcttaggattttttttttttt 40537150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 31314867 - 31314737
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||||||  |||||||          ||||||||| ||||| ||||||| || ||||    
T  31314867 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttg----------tgggattttctagtgaaattttagcatgaaa 31314778  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||||||||||||||| ||||||||||||  ||||||||||    
T  31314777 aagtctttcatgaaaacatgagatttcttaggattgttttt 31314737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 9 - 102
Target Start/End: Original strand, 23465026 - 23465119
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaac 102  Q
    |||| ||||||||||||| ||||||||||||||| |||||||||||||||  || ||||||||||||||||||||||| ||||  |||||||||    
T  23465026 gtctagtggtattcaaaaccattcaaatttcgaaggattgtttaataaatcagaatttgatggattttgtgggattttctagttaaattttaac 23465119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 18 - 86
Target Start/End: Complemental strand, 25504765 - 25504697
Alignment:
Q  18 tattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggatttt 86  Q
    ||||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||||||||||||    
T  25504765 tattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggatttt 25504697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 15 - 107
Target Start/End: Original strand, 28371001 - 28371093
Alignment:
Q  15 tggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaa 107  Q
    ||||||||||||||||||||||||  || ||||||||||||||||| |||||| || ||||||||||||||| ||||| |||||||| |||||    
T  28371001 tggtattcaaaatcattcaaattttaaaggattgtttaataaattgaattttggtgaattttgtgggattttctagtgaaattttaagaagaa 28371093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 9 - 124
Target Start/End: Original strand, 53275910 - 53276025
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||| ||| |||| |||||||||||||||||||| |||||| ||||||||  ||||||||||||||||||| |||||| || |  ||||||| || ||||    
T  53275910 gtctagtgatatttaaaatcattcaaatttcgaaggattgtgtaataaatcagattttgatggattttgtgagattttctaataaaattttagcatgaaa 53276009  T
Q  109 aagtctttcatgaaaa 124  Q
    ||||||||||| ||||    
T  53276010 aagtctttcattaaaa 53276025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 9 - 137
Target Start/End: Complemental strand, 41581923 - 41581796
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaag-aa 107  Q
    |||| |||||||| | | |||||||||||| |||| ||||||||||||||||||  |||||  ||||||||||||||| ||||| |||||||||| | ||    
T  41581923 gtctcgtggtatttagagtcattcaaattttgaataattgtttaataaattgga--ttgatatattttgtgggattttctagtgaaattttaacatgaaa 41581826  T
Q  108 aaagtctttcatgaaaagatgagatttctt 137  Q
    ||| | ||||||| ||| ||||||||||||    
T  41581825 aaaatatttcatgtaaacatgagatttctt 41581796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 70 - 157
Target Start/End: Complemental strand, 36728023 - 36727937
Alignment:
Q  70 ggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttattttaaa 157  Q
    ||||||||| ||||||| ||||| ||||||||||||||||| ||||||||| | | ||||||||| |||||||||||||| |||||||    
T  36728023 ggattttgtaggattttttagtgaaattttaacaagaaaaaatctttcatg-agacatgagattttttgagattgttttttttttaaa 36727937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 29 - 168
Target Start/End: Original strand, 20021424 - 20021563
Alignment:
Q  29 attcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaac-aagaaaaagtctttcatgaaaagat 127  Q
    ||||||||||  || |||||||||||||||| ||||||| |||||||| ||||||||| || || ||||||||| || ||||| ||||||||||| | ||    
T  20021424 attcaaattttaaaggattgtttaataaattagattttgctggattttatgggattttttaatgaaattttaacaaaaaaaaaatctttcatgaagacat 20021523  T
Q  128 gagatttcttgagattgtttttattttaaaagttactatct 168  Q
     ||||||| || ||||  ||||  ||| |||||||||||||    
T  20021524 aagatttcatgggattactttt-ctttgaaagttactatct 20021563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 69 - 154
Target Start/End: Original strand, 11090435 - 11090520
Alignment:
Q  69 tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttatttt 154  Q
    |||||||||||||||||| ||||| ||||||| ||  ||||||||||| || |||| ||||||||||||  |||||||||| ||||    
T  11090435 tggattttgtgggattttttagtgaaattttagcattaaaaagtctttaataaaaacatgagatttcttaggattgtttttctttt 11090520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 159; Significance: 8e-85; HSPs: 45)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 159; E-Value: 8e-85
Query Start/End: Original strand, 9 - 171
Target Start/End: Original strand, 6312639 - 6312801
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6312639 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 6312738  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttactatctttt 171  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6312739 aagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttactatctttt 6312801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 9 - 171
Target Start/End: Original strand, 51701645 - 51701807
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51701645 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 51701744  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttactatctttt 171  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  51701745 aagtctttcatgaaaagatgagattttttgagattgtttttattttaaaagttactatctttt 51701807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 9 - 168
Target Start/End: Complemental strand, 29396523 - 29396364
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29396523 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 29396424  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttactatct 168  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  29396423 aagtctttcatgaaaagatgagatttcttgagattgtttttgttttaaaagttactatct 29396364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 9 - 171
Target Start/End: Original strand, 25612222 - 25612384
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    ||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  25612222 gtcttgtggtattcaaaatcattcaaatttcaaaggattgtttaataaattggattttgatggattttgtgggattttgtagtataattttaacaagaaa 25612321  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttactatctttt 171  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25612322 aagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttactatctttt 25612384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 9 - 164
Target Start/End: Complemental strand, 48177597 - 48177442
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48177597 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 48177498  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttact 164  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  48177497 aagtctttcatgaaaagatgagatttcttgagattgtttttcttttaaaagatact 48177442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 13 - 171
Target Start/End: Complemental strand, 9322631 - 9322473
Alignment:
Q  13 tgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagt 112  Q
    |||||||||||||||||||||||||| ||| ||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  9322631 tgtggtattcaaaatcattcaaatttagaaggattgtttaataaattgaattttgatggattttatgggattttgtagtgtaattttaacaagaaaaagt 9322532  T
Q  113 ctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttactatctttt 171  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  9322531 ctttcatgaaaagatgagatttcttgagattgtttttattttaaaatttactatctttt 9322473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 10 - 168
Target Start/End: Complemental strand, 15835187 - 15835029
Alignment:
Q  10 tcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaa 109  Q
    |||||||||||||||||||||||||||| | || ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  15835187 tcttgtggtattcaaaatcattcaaattgcaaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaattttaacaagaaaa 15835088  T
Q  110 agtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttactatct 168  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  15835087 agtctttcatgaaaagatgagatttcttgagattgtttttgttttaaaagttactatct 15835029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 10 - 168
Target Start/End: Complemental strand, 28387527 - 28387369
Alignment:
Q  10 tcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaa 109  Q
    |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||    
T  28387527 tcttgtggtattcaaattcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtttaattttaacaaaaaaa 28387428  T
Q  110 agtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttactatct 168  Q
    |||||||||| ||||||||||||||||||||||||||||| |||||||||||| |||||    
T  28387427 agtctttcataaaaagatgagatttcttgagattgtttttgttttaaaagttattatct 28387369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 9 - 168
Target Start/End: Original strand, 46328107 - 46328266
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||| ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46328107 gtctcgtggtattcaaaatcattcaaatttcgaaggattgtttaattaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 46328206  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttactatct 168  Q
    ||||||||||| ||||||| |||||||| || ||||||||| ||||||||||||||||||    
T  46328207 aagtctttcataaaaagataagatttctcgaaattgtttttcttttaaaagttactatct 46328266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 9 - 168
Target Start/End: Complemental strand, 38536224 - 38536075
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    ||||||||||||||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||          ||||||||||||||||||||    
T  38536224 gtcttgtggtattcaaaattattcaaatttcaaaggattgtttaataaattggattttgatggattttgt----------agtgtaattttaacaagaaa 38536135  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttactatct 168  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||    
T  38536134 aagtctttcatgaaaagatgagatttcttgagattgtttttcttttaaaagttacaatct 38536075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 9 - 168
Target Start/End: Complemental strand, 38558442 - 38558293
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    ||||||||||||||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||          ||||||||||||||||||||    
T  38558442 gtcttgtggtattcaaaattattcaaatttcaaaggattgtttaataaattggattttgatggattttgt----------agtgtaattttaacaagaaa 38558353  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttactatct 168  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||    
T  38558352 aagtctttcatgaaaagatgagatttcttgagattgtttttcttttaaaagttacaatct 38558293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 9 - 158
Target Start/End: Complemental strand, 9577567 - 9577418
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||||||| ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| |||||| ||||| |||||||  | ||||    
T  9577567 gtcttgtgatattcaaaatcattcaaatttagaaggattgtttaataaattggattttgatggattttgtgagattttctagtgaaattttagaatgaaa 9577468  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaa 158  Q
    || ||||||||||||| ||||||||||||| |||||||||| ||||||||    
T  9577467 aaatctttcatgaaaacatgagatttcttgggattgtttttcttttaaaa 9577418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 9 - 161
Target Start/End: Original strand, 29219351 - 29219493
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||||||||||||||||||||||||||||  ||| ||||||||||||||||||||||||||||||          |||||||||||||||||||||||||    
T  29219351 gtcttgtggtattcaaaatcattcaaattaagaaggattgtttaataaattggattttgatggat----------tttgtagtgtaattttaacaagaaa 29219440  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagtt 161  Q
    |||| |||||||||||||||||||||||||||||||||||| |||||||||||    
T  29219441 aagtatttcatgaaaagatgagatttcttgagattgtttttcttttaaaagtt 29219493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 6304387 - 6304247
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || ||||    
T  6304387 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 6304288  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||||||||||||||| |||| |||||||  ||||||||||    
T  6304287 aagtctttcatgaaaacatgaaatttcttatgattgttttt 6304247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 19451943 - 19451803
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||| ||||||||||||||||||||||||||||| ||| |||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || ||||    
T  19451943 gtctagtggtattcaaaatcattcaaatttcgaaggatcgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 19451844  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||||||||||||||| ||||||||||||  ||||||||||    
T  19451843 aagtctttcatgaaaacatgagatttcttatgattgttttt 19451803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 14 - 149
Target Start/End: Complemental strand, 49198399 - 49198264
Alignment:
Q  14 gtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtc 113  Q
    ||||||||||||||||||||||||||||| |||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || |||||||||    
T  49198399 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 49198300  T
Q  114 tttcatgaaaagatgagatttcttgagattgttttt 149  Q
    ||||||||||| |||| |||||||  ||||||||||    
T  49198299 tttcatgaaaacatgatatttcttaggattgttttt 49198264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 16 - 146
Target Start/End: Original strand, 21222219 - 21222349
Alignment:
Q  16 ggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctt 115  Q
    ||||||||||||||||||||||||||| |||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || |||||||||||    
T  21222219 ggtattcaaaatcattcaaatttcgaaggattgtttaataaataagattttgatggattttgtgggattttttagtgaaattttagcatgaaaaagtctt 21222318  T
Q  116 tcatgaaaagatgagatttcttgagattgtt 146  Q
    ||||||||| ||||||||||||  |||||||    
T  21222319 tcatgaaaacatgagatttcttaggattgtt 21222349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 28824507 - 28824368
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||  |||||||||||||||||||||||||| ||| | |||||||||| ||||    
T  28824507 gtcttgtggtattcaaaatcattcaaatttcgaa-gattgtttaataaatcagattttgatggattttgtgggattttctagggaaattttaacatgaaa 28824409  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||||||| || |||| ||||||||||||  ||||||||||    
T  28824408 aagtcttttataaaaacatgagatttcttaggattgttttt 28824368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 9 - 137
Target Start/End: Original strand, 35279737 - 35279865
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||| |||||||||||||||||| |||||||||| |||||||||||||||  |||||||||||||||||||||||||| ||||| ||||| |||| ||||    
T  35279737 gtctagtggtattcaaaatcatttaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaatttcaacatgaaa 35279836  T
Q  109 aagtctttcatgaaaagatgagatttctt 137  Q
    |||||||||||||||| ||||||||||||    
T  35279837 aagtctttcatgaaaacatgagatttctt 35279865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 50192685 - 50192545
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||| ||||||||||||||||||||||||| ||| |||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || ||||    
T  50192685 gtctagtggtattcaaaatcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 50192586  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||||||||||||||| ||||||||| ||  ||||||||||    
T  50192585 aagtctttcatgaaaacatgagattttttaggattgttttt 50192545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 13 - 147
Target Start/End: Complemental strand, 35679259 - 35679125
Alignment:
Q  13 tgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagt 112  Q
    |||||||||||||||||||||||||||||| |||||||||||||||  |||||||||||||||  ||||||||| ||||| ||||||| || ||||||||    
T  35679259 tgtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggatttgatgggattttctagtgaaattttagcatgaaaaagt 35679160  T
Q  113 ctttcatgaaaagatgagatttcttgagattgttt 147  Q
    |||||||||| | |||||||||||| |||||||||    
T  35679159 ctttcatgaagacatgagatttcttaagattgttt 35679125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 14 - 159
Target Start/End: Complemental strand, 48668905 - 48668770
Alignment:
Q  14 gtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtc 113  Q
    |||||||||||||| |||||||||||||| ||||||||||||||||||||||||          ||||||| ||||||||||||||||||||||||||||    
T  48668905 gtggtattcaaaattattcaaatttcgaaagattgtttaataaattggattttg----------tgggattctgtagtgtaattttaacaagaaaaagtc 48668816  T
Q  114 tttcatgaaaagatgagatttcttgagattgtttttattttaaaag 159  Q
    ||||||||||||||||||||| ||| |||||||||| |||||||||    
T  48668815 tttcatgaaaagatgagatttgttgggattgtttttcttttaaaag 48668770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 9 - 134
Target Start/End: Complemental strand, 32589088 - 32588963
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||||||||||||||||||||||||||||| ||| ||||||||||||||| |||||||||||||||||||| |||||| ||||| ||||||| ||  |||    
T  32589088 gtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaatcggattttgatggattttgtgagattttctagtgaaattttagcataaaa 32588989  T
Q  109 aagtctttcatgaaaagatgagattt 134  Q
    |||||||||||||||| |||||||||    
T  32588988 aagtctttcatgaaaacatgagattt 32588963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 37014775 - 37014635
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||||||| |||||||||||||||||||||| || |||||||| |||||||| ||||||||||||||||| ||||||| ||||| ||||||| || ||||    
T  37014775 gtcttgtgatattcaaaatcattcaaatttctaaagattgttttataaattgaattttgatggattttgtcggattttctagtgaaattttagcatgaaa 37014676  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||||| |||| |||| |||||||||||| |||||||||||    
T  37014675 aagtctctcataaaaacatgagatttcttaagattgttttt 37014635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 45760144 - 45760004
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||| |||||||||||||||||||||| |||||| |||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || ||||    
T  45760144 gtctagtggtattcaaaatcattcaaacttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 45760045  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||| ||| ||||||| ||||||||||||  ||||||||||    
T  45760044 aagtatttgatgaaaacatgagatttcttaggattgttttt 45760004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 9 - 149
Target Start/End: Original strand, 47780776 - 47780916
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||| ||| |||||||||||||||||| ||  || |||||||||||||||  |||||||||||||||||||||||||| ||||| |||||||||| ||||    
T  47780776 gtctagtgatattcaaaatcattcaaaattaaaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttaacatgaaa 47780875  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||| ||||||||||| |||||||||||| |||||||||||    
T  47780876 aagtttttcatgaaaacatgagatttcttaagattgttttt 47780916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 9 - 124
Target Start/End: Original strand, 45536009 - 45536124
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || ||||    
T  45536009 gtctagtggtattcaaaatcattcaaatttcgaaagattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 45536108  T
Q  109 aagtctttcatgaaaa 124  Q
    ||||||||||||||||    
T  45536109 aagtctttcatgaaaa 45536124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 12 - 137
Target Start/End: Complemental strand, 31572329 - 31572204
Alignment:
Q  12 ttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaag 111  Q
    |||||||||||||||||||| |||||||||| |||||||||||||||  |||||||||||||||||||||||||| ||||| |||||||  | |||||||    
T  31572329 ttgtggtattcaaaatcatttaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttatagtgaaattttaggatgaaaaag 31572230  T
Q  112 tctttcatgaaaagatgagatttctt 137  Q
    ||||||||||||  ||||||||||||    
T  31572229 tctttcatgaaatcatgagatttctt 31572204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 47654486 - 47654346
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||| |||||||||||||| |||||||||||||| |||||||||||||||  |||||||||||||||||||| ||||| ||| | ||||||| || ||||    
T  47654486 gtctagtggtattcaaaattattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtggaattttctagggaaattttagcatgaaa 47654387  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||| ||||||||||| ||||||||||||  ||||||||||    
T  47654386 aagtatttcatgaaaacatgagatttcttaggattgttttt 47654346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 9 - 137
Target Start/End: Original strand, 49418149 - 49418277
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||| |||||||||||||||||||||||||| || |||||||||||||||  |||||||||||||||||||||||||| || || ||||||| || ||||    
T  49418149 gtctagtggtattcaaaatcattcaaatttcaaaggattgtttaataaatcagattttgatggattttgtgggattttctattgaaattttagcatgaaa 49418248  T
Q  109 aagtctttcatgaaaagatgagatttctt 137  Q
    || ||||||||||||| ||||||||||||    
T  49418249 aaatctttcatgaaaatatgagatttctt 49418277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 9 - 164
Target Start/End: Original strand, 18798556 - 18798691
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||                    |||||||||||||||||||||||||    
T  18798556 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggat--------------------tttgtagtgtaattttaacaagaaa 18798635  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttact 164  Q
    |||||||||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  18798636 aagtctttcatgaaaagatgagatttctagagattgtttttgttttaaaagttact 18798691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 18 - 149
Target Start/End: Original strand, 29556178 - 29556310
Alignment:
Q  18 tattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttc 117  Q
    ||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| ||||||||| || || ||||||| |  ||||||||||||     
T  29556178 tattcaaaatcattcaaatttcgaaagattgtttaataaattagattttgatggattttatgggattttctaatgaaattttagcttgaaaaagtctttt 29556277  T
Q  118 atgaaa-agatgagatttcttgagattgttttt 149  Q
    |||||| | ||||||||||||  ||||||||||    
T  29556278 atgaaacacatgagatttcttaggattgttttt 29556310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 69 - 168
Target Start/End: Original strand, 45272700 - 45272799
Alignment:
Q  69 tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttactatct 168  Q
    ||||||||||| |||||||||||||||||||||||||||||| ||||| || |||||||||||||| |||||||||||||| |||||||||||| |||||    
T  45272700 tggattttgtgagattttgtagtgtaattttaacaagaaaaaatcttttataaaaagatgagattttttgagattgtttttcttttaaaagttattatct 45272799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 9 - 115
Target Start/End: Original strand, 48524384 - 48524490
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||||||| ||||||||||||||||||||| ||| |||||||||||||||  | |||||||||||||||||||||||| ||||| |||||||||| ||||    
T  48524384 gtcttgtgatattcaaaatcattcaaattttgaaagattgtttaataaatcagtttttgatggattttgtgggattttctagtgaaattttaacatgaaa 48524483  T
Q  109 aagtctt 115  Q
    |||||||    
T  48524484 aagtctt 48524490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 9 - 133
Target Start/End: Complemental strand, 5495231 - 5495117
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||| |||||||||||||||||| ||||||| || |||| |||||||||||||||||||          |||||||||||||||||||||||||||||||    
T  5495231 gtctcgtggtattcaaaatcatttaaatttcaaaggattatttaataaattggattttg----------tgggattttgtagtgtaattttaacaagaaa 5495142  T
Q  109 aagtctttcatgaaaagatgagatt 133  Q
    ||||| || ||||||||||||||||    
T  5495141 aagtcctttatgaaaagatgagatt 5495117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 9 - 109
Target Start/End: Original strand, 730214 - 730314
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||| ||||||||||||||||||||||||||||   ||||||||||||||  ||||||||||||||||||| |||||| ||||| ||||||| || ||||    
T  730214 gtctagtggtattcaaaatcattcaaatttcgacgaattgtttaataaatcagattttgatggattttgtgagattttctagtgaaattttagcatgaaa 730313  T
Q  109 a 109  Q
    |    
T  730314 a 730314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 9 - 66
Target Start/End: Original strand, 49230951 - 49231008
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggatttt 66  Q
    |||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  49230951 gtcttgtggtattcaaaatcattcaaatttcgaaggattatttaataaattggatttt 49231008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 9 - 101
Target Start/End: Original strand, 51085860 - 51085952
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaa 101  Q
    |||| |||||||||||||| |||||||||| ||| |||| || ||||||||||||||||||| ||||||||| ||||| | ||| ||||||||    
T  51085860 gtctcgtggtattcaaaataattcaaattttgaaggattattaaataaattggattttgatgaattttgtggaattttcttgtgaaattttaa 51085952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 9 - 137
Target Start/End: Original strand, 33025578 - 33025696
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||||||||||||||||||||||||||||| ||| |||||||||||| ||            |||||||||||||||| || |  ||||||| || ||||    
T  33025578 gtcttgtggtattcaaaatcattcaaattttgaaggattgtttaatacat----------cagattttgtgggattttctaataaaattttagcatgaaa 33025667  T
Q  109 aagtctttcatgaaaagatgagatttctt 137  Q
    |||||||||||||||| ||||||||||||    
T  33025668 aagtctttcatgaaaacatgagatttctt 33025696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 17 - 76
Target Start/End: Original strand, 955823 - 955882
Alignment:
Q  17 gtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggatttt 76  Q
    |||||||||||||||||||||||||| | |||||||||||||  ||||||||||||||||    
T  955823 gtattcaaaatcattcaaatttcgaagggttgtttaataaatcagattttgatggatttt 955882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 34 - 136
Target Start/End: Original strand, 38319996 - 38320098
Alignment:
Q  34 aatttcgaatgattgtttaataaattggattttgatggattttg-tgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagat 132  Q
    ||||| ||||||||||||| ||||| |||||||||| ||||||| |||| |||| ||||| ||||||| ||  ||||||||||||||||||| |||| ||    
T  38319996 aattttgaatgattgtttactaaataggattttgatagattttgttgggtttttttagtg-aattttagcacaaaaaagtctttcatgaaaatatgatat 38320094  T
Q  133 ttct 136  Q
    ||||    
T  38320095 ttct 38320098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 9 - 67
Target Start/End: Original strand, 47784451 - 47784509
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttg 67  Q
    ||||||||||||||||||| ||||||| ||| || ||||||||||||||||||||||||    
T  47784451 gtcttgtggtattcaaaattattcaaacttctaaagattgtttaataaattggattttg 47784509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 12 - 67
Target Start/End: Complemental strand, 31622591 - 31622536
Alignment:
Q  12 ttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttg 67  Q
    |||| ||||||||||||||||||||||| || ||||||||||||||| ||||||||    
T  31622591 ttgttgtattcaaaatcattcaaatttcaaaagattgtttaataaatcggattttg 31622536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 31 - 77
Target Start/End: Complemental strand, 43885203 - 43885157
Alignment:
Q  31 tcaaatttcgaatgattgtttaataaattggattttgatggattttg 77  Q
    |||||||| |||||||| |||||||||||||||||||||||||||||    
T  43885203 tcaaattttgaatgattatttaataaattggattttgatggattttg 43885157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 14 - 67
Target Start/End: Original strand, 45272656 - 45272708
Alignment:
Q  14 gtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttg 67  Q
    |||||||||||||| ||| |||||||||| || |||||||||||||||||||||    
T  45272656 gtggtattcaaaattatttaaatttcgaagga-tgtttaataaattggattttg 45272708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 155; Significance: 2e-82; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 9 - 171
Target Start/End: Complemental strand, 14782269 - 14782107
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14782269 gtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 14782170  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttactatctttt 171  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14782169 aagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttactatctttt 14782107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 9 - 171
Target Start/End: Complemental strand, 44725944 - 44725782
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44725944 gtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 44725845  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttactatctttt 171  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44725844 aagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttactatctttt 44725782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 9 - 164
Target Start/End: Complemental strand, 9288591 - 9288436
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  9288591 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgggattttgtagtgtaattttaacaagaaa 9288492  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttact 164  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  9288491 aagtctttcatgaaaagatgagatttcttgagattgtttttcttttaaaagttact 9288436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 9 - 168
Target Start/End: Complemental strand, 19718015 - 19717856
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  19718015 gtcttgtggtattcaaaatcattcaaatttcgaagaattgtttaataaattggattttaatggattttgtgggattttgtagtgtaattttaacaagaaa 19717916  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttactatct 168  Q
    |||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  19717915 aagtcttttatgaaaagatgagatttcttgagattgtttttgttttaaaagttactatct 19717856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 9 - 168
Target Start/End: Complemental strand, 43166824 - 43166665
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  43166824 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgttgtgtaattttaacaagaaa 43166725  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttactatct 168  Q
    |||| ||||||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  43166724 aagtttttcatgaaaagatgagatttcttgagattggttttcttttaaaagttactatct 43166665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 9 - 164
Target Start/End: Complemental strand, 18958861 - 18958706
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  18958861 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttaatggattttgtgggattttgtagtgtaattttaacaagaaa 18958762  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttact 164  Q
    ||||||||||||||||||| |||||| |||||||||||||| ||||||||||||||    
T  18958761 aagtctttcatgaaaagattagattttttgagattgtttttgttttaaaagttact 18958706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 9 - 168
Target Start/End: Complemental strand, 39467602 - 39467443
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||    
T  39467602 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgaattttgatggattttatgggattttgtagtgtaattttaacaagaaa 39467503  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttactatct 168  Q
    || ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||    
T  39467502 aaatctttcatgaaaagatgagattttttgagattgtttttcttttaaaagttactatct 39467443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 9 - 162
Target Start/End: Complemental strand, 10295515 - 10295360
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggatttt-gtgggattttgtagtgtaattttaacaagaa 107  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  10295515 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggatttttgtgggattttgtagtgtaattttaacaagaa 10295416  T
Q  108 aaagtctttcatgaaaagatgagatttcttgagattgt-ttttattttaaaagtta 162  Q
    |||||||||||||||||||||||||||||||||||||| |||| ||||||||||||    
T  10295415 aaagtctttcatgaaaagatgagatttcttgagattgtttttttttttaaaagtta 10295360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 9 - 168
Target Start/End: Original strand, 26856139 - 26856298
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26856139 gtcttgtggtattcaaaatcattcaaatttcgaagtattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 26856238  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttactatct 168  Q
    ||||||||||  |||| || ||||||||||||||||||||| ||||||||||||||||||    
T  26856239 aagtctttcagaaaaaaataagatttcttgagattgtttttcttttaaaagttactatct 26856298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 14 - 164
Target Start/End: Original strand, 4403184 - 4403334
Alignment:
Q  14 gtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtc 113  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  4403184 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgggttttgatggattttgtgggattttttagtgtaattttaacaagaaaaagtc 4403283  T
Q  114 tttcatgaaaagatgagatttcttgagattgtttttattttaaaagttact 164  Q
    ||||||||||| ||||||||||||| |||||||||| ||||||||||||||    
T  4403284 tttcatgaaaatatgagatttcttgggattgtttttcttttaaaagttact 4403334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 9 - 166
Target Start/End: Original strand, 32497597 - 32497744
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||| |    
T  32497597 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattgga----------ttttgtgggattttgtagtgtaattttaacaagaga 32497686  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttactat 166  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  32497687 aagtctttcatgaaaagatgagatttcttgagattgtttttcttttaaaagttactat 32497744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 9 - 168
Target Start/End: Complemental strand, 18306095 - 18305946
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||          |||||||||||||||||||||||||||||||    
T  18306095 gtcttgtggtattcaaaatcattcaaatttcgaaagattgtttaataaattggattttg----------tgggattttgtagtgtaattttaacaagaaa 18306006  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttactatct 168  Q
    |||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||    
T  18306005 aagtctttcatgaaaagatgagatttcttgagattgttattcttttaaaagttactatct 18305946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 9 - 168
Target Start/End: Original strand, 7466407 - 7466556
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||||||||||||||||||||||||||||| |||  ||||||||||||||||||          ||||||||||||||||||||||||||||||||||||    
T  7466407 gtcttgtggtattcaaaatcattcaaattttgaagaattgtttaataaattgga----------ttttgtgggattttgtagtgtaattttaacaagaaa 7466496  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttactatct 168  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||    
T  7466497 aagtctttcatgaaaagatgagatttcttgagattgtttttcttttaaaagttacgatct 7466556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 24501947 - 24501807
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || ||||    
T  24501947 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 24501848  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||||||||||||||| ||||||||||||  ||||||||||    
T  24501847 aagtctttcatgaaaacatgagatttcttaggattgttttt 24501807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 26374564 - 26374424
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || ||||    
T  26374564 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaataagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 26374465  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||||||||||||||| ||||||||||||  ||||||||||    
T  26374464 aagtctttcatgaaaacatgagatttcttaggattgttttt 26374424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 9 - 162
Target Start/End: Original strand, 16362268 - 16362411
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||          |||||||||||||||||||||||||    
T  16362268 gtctcgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggat----------tttgtagtgtaattttaacaagaaa 16362357  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagtta 162  Q
    || ||||| || ||||||||||||||||||||||||||||| ||||||||||||    
T  16362358 aaatcttttataaaaagatgagatttcttgagattgtttttcttttaaaagtta 16362411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 2704953 - 2704813
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||| |||||  |||||| || ||||    
T  2704953 gtctagtggtattcaaaatcattcaaatttcgaatgattgtttaataaatcaaattttgatggattttgtgggattttctagtgatattttagcatgaaa 2704854  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||||||||||||||| ||||||||||||  ||||||||||    
T  2704853 aagtctttcatgaaaacatgagatttcttaggattgttttt 2704813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 9 - 164
Target Start/End: Original strand, 37857191 - 37857336
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    ||||||||||||||||| ||||||||||||  || ||||||||||||||||||||||||||||||          ||||||||||||||| |||||||||    
T  37857191 gtcttgtggtattcaaattcattcaaattttaaaggattgtttaataaattggattttgatggat----------tttgtagtgtaatttgaacaagaaa 37857280  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttact 164  Q
    || |||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  37857281 aaatctttcatgaaaagatgagatttcttgagattgtttttcttttaaaagttact 37857336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 9 - 149
Target Start/End: Original strand, 42937423 - 42937563
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| ||  |||    
T  42937423 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcattaaa 42937522  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||||||||||||||| ||||||||||||  ||||||||||    
T  42937523 aagtctttcatgaaaacatgagatttcttatgattgttttt 42937563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 42938251 - 42938111
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| |  ||||    
T  42938251 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcctgaaa 42938152  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||||||||||||||| ||||||||||||  ||||||||||    
T  42938151 aagtctttcatgaaaacatgagatttcttaggattgttttt 42938111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 10 - 164
Target Start/End: Complemental strand, 42305918 - 42305774
Alignment:
Q  10 tcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaa 109  Q
    |||||||||||||||||| |||||||||||||| ||||||||||| ||||||||||| |||||||||||          |||||||||||||||||||||    
T  42305918 tcttgtggtattcaaaataattcaaatttcgaaggattgtttaatcaattggattttaatggattttgt----------agtgtaattttaacaagaaaa 42305829  T
Q  110 agtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttact 164  Q
    |||| |||||||||| |||||||||||||||||||||||| |||| |||||||||    
T  42305828 agtcattcatgaaaaaatgagatttcttgagattgtttttgtttttaaagttact 42305774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 7507033 - 7506893
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||| ||||||||||||| ||||||||||| ||| |||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || ||||    
T  7507033 gtctagtggtattcaaaaccattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 7506934  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||||||||||| ||| ||||||||||||  ||||||||||    
T  7506933 aagtctttcatgtaaacatgagatttcttaggattgttttt 7506893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 42735411 - 42735271
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||| |||||||||||||||||||||||||||||  ||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| |  ||||    
T  42735411 gtctagtggtattcaaaatcattcaaatttcgaagtattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcttgaaa 42735312  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    ||||||||||| |||| ||||||||||||  ||||||||||    
T  42735311 aagtctttcataaaaacatgagatttcttaggattgttttt 42735271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 14 - 149
Target Start/End: Complemental strand, 5576749 - 5576614
Alignment:
Q  14 gtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtc 113  Q
    |||||||||||||||||||||||||||||  |||||||||||||   |||||||||||||||||||||||||| ||||| ||||||| || |||||||||    
T  5576749 gtggtattcaaaatcattcaaatttcgaagaattgtttaataaaccagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 5576650  T
Q  114 tttcatgaaaagatgagatttcttgagattgttttt 149  Q
    ||| ||||||| ||||||||||||  ||||||||||    
T  5576649 ttttatgaaaacatgagatttcttaggattgttttt 5576614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 9 - 134
Target Start/End: Complemental strand, 10392371 - 10392246
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||| |||||||||| |||||||||||||||||| |||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || ||||    
T  10392371 gtctagtggtattcagaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 10392272  T
Q  109 aagtctttcatgaaaagatgagattt 134  Q
    || ||||||||||||| |||||||||    
T  10392271 aaatctttcatgaaaacatgagattt 10392246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 17 - 161
Target Start/End: Complemental strand, 39189940 - 39189798
Alignment:
Q  17 gtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtcttt 116  Q
    |||||||| ||||||||||||||||| ||||||||||||||||| |||| |||||||||||  | ||||| ||||  ||||||||||||||||| |||||    
T  39189940 gtattcaacatcattcaaatttcgaaggattgtttaataaattgaattt-gatggattttgatgaattttctagta-aattttaacaagaaaaaatcttt 39189843  T
Q  117 catgaaaagatgagatttcttgagattgtttttattttaaaagtt 161  Q
    |||||||| ||||||||||||| |||||||||| |||||||||||    
T  39189842 catgaaaacatgagatttcttgggattgtttttcttttaaaagtt 39189798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 23115302 - 23115163
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||| |||||||||||| |||||||||||| ||| |||||||||||||||  |||||||||||||||||||||||||| || || ||||||  || ||||    
T  23115302 gtctagtggtattcaaa-tcattcaaatttggaaggattgtttaataaatcagattttgatggattttgtgggattttctaatgaaattttggcatgaaa 23115204  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||||||||||||||| |||||||| |||  ||||||||||    
T  23115203 aagtctttcatgaaaacatgagattccttaggattgttttt 23115163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 9 - 162
Target Start/End: Original strand, 31623767 - 31623900
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||                    |||||||||||||||||||||||||    
T  31623767 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggat--------------------tttgtagtgtaattttaacaagaaa 31623846  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagtta 162  Q
    |||| |||||||||||||| ||||||||||||||||||||| ||||||||||||    
T  31623847 aagtttttcatgaaaagataagatttcttgagattgtttttcttttaaaagtta 31623900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 4950150 - 4950010
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||||| ||||||||||||||||||| |||| || |||| ||||||||||| |||||||||||| ||||||| ||||| ||||| ||||||| || ||||    
T  4950150 gtcttggggtattcaaaatcattcaagtttcaaaagattatttaataaattagattttgatggaatttgtggaattttctagtgaaattttagcatgaaa 4950051  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    || | ||||||| ||| || ||||||||| | |||||||||    
T  4950050 aaatatttcatgcaaacataagatttcttaaaattgttttt 4950010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 14 - 149
Target Start/End: Original strand, 43959734 - 43959859
Alignment:
Q  14 gtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtc 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||          ||| ||||||| || |||||||||    
T  43959734 gtggtattcaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggattttgtg----------gtgaaattttagcatgaaaaagtc 43959823  T
Q  114 tttcatgaaaagatgagatttcttgagattgttttt 149  Q
    ||| || |||| ||||||||||||  ||||||||||    
T  43959824 tttaattaaaacatgagatttcttatgattgttttt 43959859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 15 - 149
Target Start/End: Original strand, 41479175 - 41479299
Alignment:
Q  15 tggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtct 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||            |||||||||||||||| ||||  ||||||| || |||||| |||    
T  41479175 tggtattcaaaatcattcaaatttcgaatgattgtttaataaat----------cagattttgtgggattttctagtaaaattttagcatgaaaaaatct 41479264  T
Q  115 ttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||||||||| ||||||||||||  ||||||||||    
T  41479265 ttcatgaaaacatgagatttcttaggattgttttt 41479299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 9 - 67
Target Start/End: Complemental strand, 4031392 - 4031334
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttg 67  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  4031392 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 4031334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 15 - 86
Target Start/End: Complemental strand, 8410526 - 8410455
Alignment:
Q  15 tggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggatttt 86  Q
    ||||||||||||||||| |||||| ||| ||||||||| ||||||||| |||||||||||||||||||||||    
T  8410526 tggtattcaaaatcattgaaatttggaaggattgtttactaaattggactttgatggattttgtgggatttt 8410455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 9 - 124
Target Start/End: Complemental strand, 13478384 - 13478269
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    ||||||| |||||||||||| || |||||||||| |||||||||||||||| ||||| | |||||||||| ||||||| |||   ||||||| || || |    
T  13478384 gtcttgtagtattcaaaatcttttaaatttcgaaggattgtttaataaattagatttcgttggattttgtaggattttttagctaaattttagcatgata 13478285  T
Q  109 aagtctttcatgaaaa 124  Q
    |||||||| |||||||    
T  13478284 aagtcttttatgaaaa 13478269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 80 - 127
Target Start/End: Complemental strand, 4031341 - 4031294
Alignment:
Q  80 ggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat 127  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  4031341 ggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat 4031294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 9 - 67
Target Start/End: Complemental strand, 32711416 - 32711358
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttg 67  Q
    |||| |||||||||||||||||| |||||||||| |||||||||||||||  |||||||    
T  32711416 gtctagtggtattcaaaatcatttaaatttcgaaggattgtttaataaatcagattttg 32711358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 10 - 66
Target Start/End: Original strand, 41070018 - 41070074
Alignment:
Q  10 tcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggatttt 66  Q
    |||||||||||| |||||||||| |||||| ||||||||||| |||||||| |||||    
T  41070018 tcttgtggtatttaaaatcattccaatttcaaatgattgtttgataaattgaatttt 41070074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 66
Target Start/End: Complemental strand, 9770545 - 9770497
Alignment:
Q  18 tattcaaaatcattcaaatttcgaatgattgtttaataaattggatttt 66  Q
    |||||||||| ||||||||||| ||  ||| ||||||||||||||||||    
T  9770545 tattcaaaataattcaaatttcaaagaattatttaataaattggatttt 9770497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 155; Significance: 2e-82; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 9 - 171
Target Start/End: Original strand, 31895767 - 31895929
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  31895767 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttctagtgtaattttaacaagaaa 31895866  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttactatctttt 171  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31895867 aagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttactatctttt 31895929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 9 - 164
Target Start/End: Complemental strand, 14262567 - 14262412
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    ||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14262567 gtcttgtggtattcaaaatcatttaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 14262468  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttact 164  Q
    |||||||||||||||||||| |||||||||||||||||||| ||||||||||||||    
T  14262467 aagtctttcatgaaaagatgggatttcttgagattgtttttcttttaaaagttact 14262412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 9 - 168
Target Start/End: Complemental strand, 34759184 - 34759025
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    ||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34759184 gtcttgtggtattcaaaatcattcaaatttccaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 34759085  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttactatct 168  Q
    || |||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||    
T  34759084 aaatctttcatgaaaagatgagatttcttgagattatttttcttttaaaagttactatct 34759025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 9 - 168
Target Start/End: Original strand, 7497147 - 7497305
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  7497147 gtcttgtggtattcaaaatcattcaaatttcgaaggagtgtttaataaattggattttgatggattttgtgg-attttgtagtgtaattttaacaagaaa 7497245  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttactatct 168  Q
    ||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||    
T  7497246 aagtctttcatgaaaagatgagatttcttgagattatttttcttttaaaagttactatct 7497305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 10 - 137
Target Start/End: Original strand, 34773481 - 34773608
Alignment:
Q  10 tcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaa 109  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  34773481 tcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgcagtgtaattttaacaagaaaa 34773580  T
Q  110 agtctttcatgaaaagatgagatttctt 137  Q
    ||||||||||||||||||||||||||||    
T  34773581 agtctttcatgaaaagatgagatttctt 34773608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 12 - 171
Target Start/End: Original strand, 31067567 - 31067716
Alignment:
Q  12 ttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaag 111  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||    
T  31067567 ttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgga----------ttttgtgggattttgtagtgtaattttaacaagaaaaag 31067656  T
Q  112 tctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttactatctttt 171  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31067657 tctttcataaaaagatgagatttcttgagattgtttttattttaaaagttactatctttt 31067716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 29 - 171
Target Start/End: Complemental strand, 4200541 - 4200409
Alignment:
Q  29 attcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatg 128  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||          ||||||||||||||||||||||||||||||||||||||||    
T  4200541 attcaaatttcgaaggattgtttaataaattggattttgatggattttgt----------agtgtaattttaacaagaaaaagtctttcatgaaaagatg 4200452  T
Q  129 agatttcttgagattgtttttattttaaaagttactatctttt 171  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  4200451 agatttcttgagattgtttttattttaaaagttactatctttt 4200409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 9 - 168
Target Start/End: Complemental strand, 30385191 - 30385044
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||          ||||||||||||||||||||||||||| |||    
T  30385191 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg----------tgggattttgtagtgtaattttaacaacaaa 30385102  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttactatct 168  Q
      ||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||    
T  30385101 --gtctttcatgaaaagatgagatttcttgagattgtttttcttttaaaaattactatct 30385044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 6197612 - 6197472
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || ||||    
T  6197612 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 6197513  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||||||||||||||| ||||||||||||  ||||||||||    
T  6197512 aagtctttcatgaaaacatgagatttcttaggattgttttt 6197472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 15 - 137
Target Start/End: Complemental strand, 2300866 - 2300744
Alignment:
Q  15 tggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtct 114  Q
    ||||||| |||||||||||||||||||| |||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || ||||||||||    
T  2300866 tggtattgaaaatcattcaaatttcgaaggattgtttaataaataagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtct 2300767  T
Q  115 ttcatgaaaagatgagatttctt 137  Q
    |||||||||| ||||||||||||    
T  2300766 ttcatgaaaacatgagatttctt 2300744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 9 - 149
Target Start/End: Original strand, 1391695 - 1391835
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||| ||||||||||||||||||||||||| ||| |||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||  || ||||    
T  1391695 gtctagtggtattcaaaatcattcaaatttggaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttggcatgaaa 1391794  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||||||||||||||| |||||||| |||  ||||||||||    
T  1391795 aagtctttcatgaaaacatgagattccttaggattgttttt 1391835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 13 - 137
Target Start/End: Original strand, 7051920 - 7052044
Alignment:
Q  13 tgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagt 112  Q
    |||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| ||||  ||||||| || ||||||||    
T  7051920 tgtgatattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtaggattttctagtaaaattttagcatgaaaaagt 7052019  T
Q  113 ctttcatgaaaagatgagatttctt 137  Q
     |||||| |||  ||||||||||||    
T  7052020 ttttcataaaatcatgagatttctt 7052044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 17 - 149
Target Start/End: Original strand, 29076678 - 29076810
Alignment:
Q  17 gtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtcttt 116  Q
    |||||||||||||||||||||||||| |||||||||||||||  |||||||||||||||| | ||||||| ||||| ||||||| || |||||| |||||    
T  29076678 gtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttataggattttctagtgaaattttagcatgaaaaaatcttt 29076777  T
Q  117 catgaaaagatgagatttcttgagattgttttt 149  Q
    ||| |||| ||||||||| ||  ||||||||||    
T  29076778 cataaaaacatgagattttttaggattgttttt 29076810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 17 - 149
Target Start/End: Original strand, 29111652 - 29111784
Alignment:
Q  17 gtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtcttt 116  Q
    |||||||||||||||||||||||||| |||||||||||||||  |||||||||||||||| | ||||||| ||||| ||||||| || |||||| |||||    
T  29111652 gtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttataggattttctagtgaaattttagcatgaaaaaatcttt 29111751  T
Q  117 catgaaaagatgagatttcttgagattgttttt 149  Q
    ||| |||| ||||||||| ||  ||||||||||    
T  29111752 cataaaaacatgagattttttaggattgttttt 29111784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 9 - 129
Target Start/End: Original strand, 28002736 - 28002856
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||| ||| ||||||||||||||||||||| ||| |||||||||||||||  |||||||||||||||||||  ||||| ||||| ||||||| || ||||    
T  28002736 gtctagtgatattcaaaatcattcaaatttggaaggattgtttaataaatcagattttgatggattttgtgaaattttctagtgaaattttagcatgaaa 28002835  T
Q  109 aagtctttcatgaaaagatga 129  Q
    |||||||||||||||| ||||    
T  28002836 aagtctttcatgaaaacatga 28002856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 12 - 77
Target Start/End: Original strand, 3848284 - 3848348
Alignment:
Q  12 ttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttg 77  Q
    |||||||||||||||||||| |||||| ||||||||||||||||||||| |||||| |||||||||    
T  3848284 ttgtggtattcaaaatcatttaaattttgaatgattgtttaataaattgaattttg-tggattttg 3848348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 149
Target Start/End: Original strand, 2238678 - 2238722
Alignment:
Q  105 gaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||||| ||||||||||||| |||||||||||| |||||||||||    
T  2238678 gaaaaaatctttcatgaaaacatgagatttcttaagattgttttt 2238722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 155; Significance: 2e-82; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 9 - 171
Target Start/End: Complemental strand, 14000239 - 14000077
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14000239 gtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 14000140  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttactatctttt 171  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14000139 aagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttactatctttt 14000077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 9 - 168
Target Start/End: Original strand, 39852417 - 39852576
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  39852417 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttactaaattggattttgatggattttatgggattttgtagtgtaattttaacaagaaa 39852516  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttactatct 168  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  39852517 aagtctttcatgaaaagatgagatttcttgagattgtttttgttttaaaagttactatct 39852576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 9 - 168
Target Start/End: Complemental strand, 1152237 - 1152078
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1152237 gtcttgtggtattcaaaatcattcaaatttcgagggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 1152138  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttactatct 168  Q
    |||||||| |||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  1152137 aagtcttttatgaaaagatgagatttcttaagattgtttttcttttaaaagttactatct 1152078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 9 - 168
Target Start/End: Original strand, 13926003 - 13926162
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13926003 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 13926102  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttactatct 168  Q
    |||||||||| |||||||||| ||||||||||||||||||| || |||||||||||||||    
T  13926103 aagtctttcaagaaaagatgatatttcttgagattgtttttcttctaaaagttactatct 13926162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 9 - 168
Target Start/End: Complemental strand, 7947707 - 7947548
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||||| | ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  7947707 gtcttgcgatattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtggaattttgtagtgtaattttaacaagaaa 7947608  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttactatct 168  Q
    |||||||||||||||||| |||||||||||| ||||||||| |||||||||||| |||||    
T  7947607 aagtctttcatgaaaagaagagatttcttgaaattgtttttcttttaaaagttaatatct 7947548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 9 - 154
Target Start/End: Complemental strand, 4550391 - 4550246
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  4550391 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtggaattttgtagtgtaattttaacaagaaa 4550292  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgtttttatttt 154  Q
     ||||||||||||||||||||||||| |||||||||||||| ||||    
T  4550291 gagtctttcatgaaaagatgagatttgttgagattgtttttttttt 4550246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 9 - 171
Target Start/End: Complemental strand, 4240586 - 4240434
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||          ||||||||||||||||||||    
T  4240586 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgt----------agtgtaattttaacaagaaa 4240497  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttactatctttt 171  Q
    |||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||    
T  4240496 aagtctttcatgaatagatgagatttcttgagattgtttttcttttaaaagttactatctttt 4240434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 10 - 168
Target Start/End: Original strand, 5949181 - 5949329
Alignment:
Q  10 tcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaa 109  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||          ||||||||||||||||||||||||||    
T  5949181 tcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggat----------tttgtagtgtaattttaacaagaaaa 5949270  T
Q  110 agtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttactatct 168  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||    
T  5949271 agtctttcatgaaaagatgagatttcttgagattgtttttcttttaaaagttattatct 5949329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 10 - 168
Target Start/End: Complemental strand, 40013835 - 40013687
Alignment:
Q  10 tcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaa 109  Q
    ||||||| ||||||||||||||||||||||||| ||||||||||| ||||||||||| |||||||||||          |||||||||||||||||||||    
T  40013835 tcttgtgttattcaaaatcattcaaatttcgaaggattgtttaatcaattggattttaatggattttgt----------agtgtaattttaacaagaaaa 40013746  T
Q  110 agtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttactatct 168  Q
    |||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||    
T  40013745 agtctttcatgaaaagatgagatttcttgagattgtttttgtttttaaagttactatct 40013687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 9 - 166
Target Start/End: Complemental strand, 1461272 - 1461125
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||||| | ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||          | ||||||||||||||||||    
T  1461272 gtcttgcgctattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgt----------actgtaattttaacaagaaa 1461183  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttactat 166  Q
    || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  1461182 aaatctttcatgaaaagatgagatttcttgagattgtttttcttttaaaagttactat 1461125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 9 - 149
Target Start/End: Original strand, 21147139 - 21147279
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || ||||    
T  21147139 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 21147238  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||||||||||||||| ||||||||||||  ||||||||||    
T  21147239 aagtctttcatgaaaacatgagatttcttaggattgttttt 21147279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 15 - 149
Target Start/End: Complemental strand, 33656169 - 33656035
Alignment:
Q  15 tggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtct 114  Q
    |||||||||||||||||||||||||||| |||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || ||||||||||    
T  33656169 tggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtct 33656070  T
Q  115 ttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||||||||| ||||||||||||  ||||||||||    
T  33656069 ttcatgaaaatatgagatttcttaggattgttttt 33656035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 9 - 137
Target Start/End: Complemental strand, 5273053 - 5272925
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || ||||    
T  5273053 gtctagtggtattcaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 5272954  T
Q  109 aagtctttcatgaaaagatgagatttctt 137  Q
    ||||||||||| |||| ||||||||||||    
T  5272953 aagtctttcataaaaacatgagatttctt 5272925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 9 - 149
Target Start/End: Original strand, 22746369 - 22746501
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||        ||||||||||||||||||    
T  22746369 gtcttgtgatattcaaaatcattcaaatttcgaatgattgtttaataaattgaattttgatggattttgtggga--------tgtaattttaacaagaaa 22746460  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    || |||||||||||||||| ||||||||| |||||||||||    
T  22746461 aactctttcatgaaaagataagatttcttaagattgttttt 22746501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 9 - 137
Target Start/End: Complemental strand, 7016873 - 7016745
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || ||||    
T  7016873 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 7016774  T
Q  109 aagtctttcatgaaaagatgagatttctt 137  Q
    ||||||||||| |||| ||||||||||||    
T  7016773 aagtctttcataaaaacatgagatttctt 7016745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 27459084 - 27458944
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||| |||||||||||||||||||| |||| ||| |||||||||||||||| |||||||||||||||||||||||||| ||||| ||||||| || ||||    
T  27459084 gtctagtggtattcaaaatcattcagattttgaaggattgtttaataaattagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 27458985  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    || || |||||||||| |||| |||||||  ||||||||||    
T  27458984 aaatcattcatgaaaacatgatatttcttaggattgttttt 27458944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 9 - 146
Target Start/End: Complemental strand, 32158031 - 32157891
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||||||| |||||||| ||||||||||||||||| ||||  ||||||| || ||||    
T  32158031 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaattagattttgacggattttgtgggattttctagtaaaattttagcacgaaa 32157932  T
Q  109 a---agtctttcatgaaaagatgagatttcttgagattgtt 146  Q
    |   ||||||||||||||| |||||||||||| | ||||||    
T  32157931 aaatagtctttcatgaaaacatgagatttcttaaaattgtt 32157891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 15 - 124
Target Start/End: Original strand, 849225 - 849334
Alignment:
Q  15 tggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtct 114  Q
    |||||||||||||||||||||||||||| |||||||||||||||  ||||||||| |||||||||||||||| ||||| ||||||| || ||||||||||    
T  849225 tggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaaagtct 849324  T
Q  115 ttcatgaaaa 124  Q
    ||||||||||    
T  849325 ttcatgaaaa 849334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 9 - 137
Target Start/End: Original strand, 139345 - 139473
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||| ||||||||||||||||||||||||||||| ||||||||||||||   |||||||||||||||||| |||||||  |||| |||||||| | ||||    
T  139345 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaaccagattttgatggattttgttggattttccagtgaaattttaatatgaaa 139444  T
Q  109 aagtctttcatgaaaagatgagatttctt 137  Q
    ||||||||||| |||| ||||||||||||    
T  139445 aagtctttcataaaaacatgagatttctt 139473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 80 - 167
Target Start/End: Original strand, 37014037 - 37014124
Alignment:
Q  80 ggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttactatc 167  Q
    |||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||    
T  37014037 ggattttgtagtataattttaacaagaaaaagtctttcataaaaagatgagatttcttgagattgtttttcttttaaaagttactatc 37014124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 9 - 149
Target Start/End: Original strand, 9689730 - 9689869
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    ||||||||||||| ||||||||| ||||||||||||||||||| ||||||| |||||||||||||| |||| |||||| | ||  |||||||  | ||||    
T  9689730 gtcttgtggtatttaaaatcatt-aaatttcgaatgattgtttgataaattagattttgatggattgtgtgagattttcttgtaaaattttattatgaaa 9689828  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    ||||||||||| |||| || |||||||||  ||||||||||    
T  9689829 aagtctttcataaaaacataagatttcttatgattgttttt 9689869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 9 - 91
Target Start/End: Complemental strand, 14465361 - 14465279
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagt 91  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| ||||||||| ||||| ||||    
T  14465361 gtcttgtggtattcaaaatcattcaaatttcgaaagattgtttaataaatcggattttgatgaattttgtggaattttctagt 14465279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 14 - 110
Target Start/End: Original strand, 6460869 - 6460965
Alignment:
Q  14 gtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaa 110  Q
    ||||||||||||||||||||||||||||| | |||||||||||||  ||||||||||||||||| |||||||| ||||| ||||||| || ||||||    
T  6460869 gtggtattcaaaatcattcaaatttcgaaggtttgtttaataaatcagattttgatggattttgagggattttctagtgaaattttatcatgaaaaa 6460965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 9 - 67
Target Start/End: Original strand, 37013986 - 37014044
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttg 67  Q
    |||||| ||||||||||||||||||||||||||| | ||||||||||||||||||||||    
T  37013986 gtcttgcggtattcaaaatcattcaaatttcgaagggttgtttaataaattggattttg 37014044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 9220841 - 9220711
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    ||||| || |||||||||||||||||||||| || ||||||||||| |||| || ||||          | ||||||| ||||  |||||||||| ||||    
T  9220841 gtcttatgatattcaaaatcattcaaatttctaaggattgtttaatgaattagaatttg----------taggattttatagtaaaattttaacacgaaa 9220752  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    ||||||||| |||||| |||| |||||||  ||||||||||    
T  9220751 aagtctttcgtgaaaacatgatatttcttaggattgttttt 9220711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 155; Significance: 2e-82; HSPs: 61)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 9 - 171
Target Start/End: Complemental strand, 36674265 - 36674103
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36674265 gtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 36674166  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttactatctttt 171  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36674165 aagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttactatctttt 36674103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 9 - 168
Target Start/End: Original strand, 18749683 - 18749842
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18749683 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 18749782  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttactatct 168  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  18749783 aagtctttcatgaaaagatgagatttcttgagattgtttttcttttaaaagttactatct 18749842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 9 - 171
Target Start/End: Original strand, 32580247 - 32580409
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  32580247 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgagggattttgtagtgtaattttaacaagaaa 32580346  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttactatctttt 171  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  32580347 aagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaaattactatctttt 32580409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 12 - 168
Target Start/End: Complemental strand, 34484162 - 34484006
Alignment:
Q  12 ttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaag 111  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  34484162 ttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaaa 34484063  T
Q  112 tctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttactatct 168  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  34484062 tctttcatgaaaagatgagatttcttgagattgtttttgttttaaaagttactatct 34484006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 9 - 168
Target Start/End: Complemental strand, 44906648 - 44906489
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  44906648 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgggattttgtagtgtaattttaacaagaaa 44906549  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttactatct 168  Q
    | ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  44906548 atgtctttcatgaaaagatgagatttcttgagattgtttttcttttaaaagttactatct 44906489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 9 - 162
Target Start/End: Original strand, 11431597 - 11431750
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    ||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  11431597 gtcttgtggtattcaaaatcatttaaatttcgaaggattgtttaataaattggattttggtggattttgtgggattttgtagtgtaattttaacaagaaa 11431696  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagtta 162  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11431697 aagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagtta 11431750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 9 - 168
Target Start/End: Original strand, 17946359 - 17946518
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||| ||| |||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17946359 gtctcgtgatattcaaaatcattcaaatttcaaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 17946458  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttactatct 168  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  17946459 aagtctttcatgaaaagatgagatttcttgagattgtttttcttttaaaagttactatct 17946518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 10 - 168
Target Start/End: Original strand, 54628916 - 54629074
Alignment:
Q  10 tcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaa 109  Q
    |||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54628916 tcttgtggtattcaaaatcattcaaatttcaaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaa 54629015  T
Q  110 agtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttactatct 168  Q
    |||||||||| ||||||||||||||||||||||||||||| |||| |||||||||||||    
T  54629016 agtctttcataaaaagatgagatttcttgagattgtttttcttttgaaagttactatct 54629074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 9 - 164
Target Start/End: Original strand, 26107332 - 26107487
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  26107332 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgtgattttgtagtgtaattttaacaagaaa 26107431  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttact 164  Q
    |||| |||||| ||||||||||||||||||||||||||||| ||||||||||||||    
T  26107432 aagtatttcataaaaagatgagatttcttgagattgtttttcttttaaaagttact 26107487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 9 - 168
Target Start/End: Original strand, 48379228 - 48379387
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||    
T  48379228 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaataagaaa 48379327  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttactatct 168  Q
    | ||||||||||||||||| ||||||||||||||||||||| ||||||| ||||||||||    
T  48379328 atgtctttcatgaaaagatcagatttcttgagattgtttttcttttaaatgttactatct 48379387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 9 - 168
Target Start/End: Original strand, 52810449 - 52810608
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||    
T  52810449 gtcttgtggtattcaaaatcattcaaattttgaatgattgtttaataaattgaattttgatggattttgtgggattttgtagcgtaattttaacaagaaa 52810548  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttactatct 168  Q
    || |||||||||||||||||||||||||||||||||||||| |||||||||  |||||||    
T  52810549 aaatctttcatgaaaagatgagatttcttgagattgtttttcttttaaaagaaactatct 52810608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 10 - 165
Target Start/End: Complemental strand, 31646418 - 31646265
Alignment:
Q  10 tcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaa 109  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31646418 tcttgtggtattcaaaatcattcaaatttcgaaagattgtttaatgaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaa 31646319  T
Q  110 agtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttacta 165  Q
    ||||||||||||||  ||||||||||||||||||||| || |||||||||||||||    
T  31646318 agtctttcatgaaa--atgagatttcttgagattgttattcttttaaaagttacta 31646265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 9 - 168
Target Start/End: Original strand, 40897215 - 40897375
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    ||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  40897215 gtcttatggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttatagtgtaattttaacaagaaa 40897314  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgtttttatttt-aaaagttactatct 168  Q
    ||||||||||||||||||||||||||||||| ||||||||| ||||  |||||||||||||    
T  40897315 aagtctttcatgaaaagatgagatttcttgatattgtttttcttttgtaaagttactatct 40897375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 125; E-Value: 1e-64
Query Start/End: Original strand, 9 - 168
Target Start/End: Complemental strand, 52618100 - 52617947
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||          
T  52618100 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaac------ 52618007  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttactatct 168  Q
    ||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  52618006 aagtctttcataaaaagatgagatttcttgagattgtttttcttttaaaagttactatct 52617947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 9 - 168
Target Start/End: Complemental strand, 51737861 - 51737703
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  51737861 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgttgtgtaattttaacaagaaa 51737762  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttactatct 168  Q
    ||||||||||| ||||||| ||  |||||||||||||||||  ||||||||||| |||||    
T  51737761 aagtctttcataaaaagataagtattcttgagattgttttt-ctttaaaagttattatct 51737703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 9 - 151
Target Start/End: Complemental strand, 50903375 - 50903233
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||||||||||||||||||||||||||||  ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50903375 gtcttgtggtattcaaaatcattcaaattaagaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 50903276  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgtttttat 151  Q
    || ||||| ||||||| ||||||||||||||||||||||||||    
T  50903275 aaatcttttatgaaaatatgagatttcttgagattgtttttat 50903233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 9 - 166
Target Start/End: Complemental strand, 50762185 - 50762038
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||          ||||||||||||||||||||    
T  50762185 gtcttgtggtattcaaaatcattctaatttcgaatgattgtttgataaattggattttgatggattttgt----------agtgtaattttaacaagaaa 50762096  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttactat 166  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  50762095 aagtctttcatgaaaagatgagatttcttgagattgtttttcttttaaaagttactat 50762038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 9 - 166
Target Start/End: Complemental strand, 10728776 - 10728629
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    ||||||||||||| |||||||||||||||| ||| |||||||||||||||||||||||||||||||||||          ||||||||||||||||||||    
T  10728776 gtcttgtggtatttaaaatcattcaaatttggaaggattgtttaataaattggattttgatggattttgt----------agtgtaattttaacaagaaa 10728687  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttactat 166  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  10728686 aagtctttcatgaaaagatgagatttcttgagattgtttttcttttaaaagttactat 10728629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 9 - 162
Target Start/End: Original strand, 37454932 - 37455075
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||          |||||||||||||||||||||||||||||||||    
T  37454932 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattgaattt----------tgtgggattttgtagtgtaattttaacaagaaa 37455021  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagtta 162  Q
    |||| |||||||||||||||||||||||||||||||||||| ||||||||||||    
T  37455022 aagtatttcatgaaaagatgagatttcttgagattgtttttcttttaaaagtta 37455075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 3206340 - 3206200
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| |||||||    
T  3206340 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcaagaaa 3206241  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||||||||||||||| ||||||||||||  ||||||||||    
T  3206240 aagtctttcatgaaaacatgagatttcttatgattgttttt 3206200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 9 - 168
Target Start/End: Original strand, 39038111 - 39038260
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||||||||||| |||||||||||||||||||||  |||||||||||||||||||||||||||||          |||||||||||||||||||||||||    
T  39038111 gtcttgtggtatccaaaatcattcaaatttcgaagaattgtttaataaattggattttgatggat----------tttgtagtgtaattttaacaagaaa 39038200  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttactatct 168  Q
    ||||||||||| ||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  39038201 aagtctttcataaaaagatgagatttcttgaaattgtttttcttttaaaagttactatct 39038260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 996221 - 996081
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || ||||    
T  996221 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 996122  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||||||||||||||| ||||||||||||  ||||||||||    
T  996121 aagtctttcatgaaaacatgagatttcttaggattgttttt 996081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 10139281 - 10139141
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || ||||    
T  10139281 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 10139182  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||||||||||||||| ||||||||||||  ||||||||||    
T  10139181 aagtctttcatgaaaacatgagatttcttaggattgttttt 10139141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 9 - 149
Target Start/End: Original strand, 19253898 - 19254038
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || ||||    
T  19253898 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaataagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 19253997  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||||||||||||||| ||||||||||||  ||||||||||    
T  19253998 aagtctttcatgaaaacatgagatttcttaggattgttttt 19254038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 9 - 149
Target Start/End: Original strand, 20498280 - 20498420
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || ||||    
T  20498280 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 20498379  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||||||||||||||| ||||||||||||  ||||||||||    
T  20498380 aagtctttcatgaaaacatgagatttcttaggattgttttt 20498420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 9 - 146
Target Start/End: Complemental strand, 33807933 - 33807796
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || ||||    
T  33807933 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 33807834  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgtt 146  Q
    |||||||||||||||| ||||||||||||  |||||||    
T  33807833 aagtctttcatgaaaacatgagatttcttaggattgtt 33807796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 9 - 133
Target Start/End: Original strand, 20833063 - 20833187
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||||||||||||||||||||||||||||  ||| |||||||||||||||||||||||||||||||||||| |||||  |||||||||||||||||||||    
T  20833063 gtcttgtggtattcaaaatcattcaaattcggaaggattgtttaataaattggattttgatggattttgtgagatttattagtgtaattttaacaagaaa 20833162  T
Q  109 aagtctttcatgaaaagatgagatt 133  Q
    |||| |||||||||||||| |||||    
T  20833163 aagtatttcatgaaaagataagatt 20833187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 37820612 - 37820472
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||||||||||||  |||| ||||||| || ||||    
T  37820612 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttccagtgaaattttagcatgaaa 37820513  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    ||||||||||| |||| |||||||||||| |||||||||||    
T  37820512 aagtctttcataaaaacatgagatttcttaagattgttttt 37820472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 9 - 158
Target Start/End: Complemental strand, 6035188 - 6035039
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||| ||| |||||||||||||||||||||||||  | ||||||||||||| |||||||||||||||||||||||||| ||||  ||||||| || ||||    
T  6035188 gtctcgtgatattcaaaatcattcaaatttcgaagcaatgtttaataaattagattttgatggattttgtgggattttctagtaaaattttagcatgaaa 6035089  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaa 158  Q
    ||||||||||| |||| |||||||||||| ||||||||||| ||||||||    
T  6035088 aagtctttcataaaaacatgagatttcttaagattgtttttcttttaaaa 6035039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 9 - 149
Target Start/End: Original strand, 6589635 - 6589775
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||| |||||||||||||||||||||||||||||  ||| ||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || ||||    
T  6589635 gtctagtggtattcaaaatcattcaaatttcgaagaattatttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 6589734  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||||||||||||||| ||||||||||||  ||||||||||    
T  6589735 aagtctttcatgaaaacatgagatttcttaggattgttttt 6589775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 29448993 - 29448853
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||||||  |||||||||||||||||||||||||| ||||  ||||||| ||  |||    
T  29448993 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtaaaattttagcataaaa 29448894  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||||||||||||||| ||||||||||||  ||||||||||    
T  29448893 aagtctttcatgaaaacatgagatttcttaggattgttttt 29448853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 9 - 149
Target Start/End: Original strand, 54625663 - 54625803
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||| |||||||||||||| |||||||||||||| |||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || ||||    
T  54625663 gtctagtggtattcaaaattattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 54625762  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||| ||||||||||| |||||||||||| |||||| ||||    
T  54625763 aagtttttcatgaaaacatgagatttcttaagattgatttt 54625803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 14 - 149
Target Start/End: Complemental strand, 3999775 - 3999640
Alignment:
Q  14 gtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtc 113  Q
    ||||||||||||||||||||||||||||| |||||||||||||||  |||||||||||||||||||||||||| ||||| |||||||  | |||||||||    
T  3999775 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagaatgaaaaagtc 3999676  T
Q  114 tttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||||| |||| ||||||||||||  ||||||||||    
T  3999675 tttcataaaaacatgagatttcttaggattgttttt 3999640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 15 - 149
Target Start/End: Original strand, 5825139 - 5825273
Alignment:
Q  15 tggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtct 114  Q
    |||||||||||||||||||||||| ||| |||||||||||||||||||||||||| |||||||||||||||| ||||| |||| || || ||||||| ||    
T  5825139 tggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatagattttgtgggattttttagtgaaattctagcatgaaaaaggct 5825238  T
Q  115 ttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||||||||| ||||||||||||  ||||||||||    
T  5825239 ttcatgaaaacatgagatttcttatgattgttttt 5825273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 9 - 168
Target Start/End: Complemental strand, 39842619 - 39842470
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||| ||| |||||||||||||||||||||||||  ||||||||||||||| |||||||| |||||||||          | ||||||||||||||||||    
T  39842619 gtctcgtgatattcaaaatcattcaaatttcgaagaattgtttaataaattagattttgacggattttgt----------aatgtaattttaacaagaaa 39842530  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttactatct 168  Q
    |||||||||||||||||||||||||||||| |||||||||| ||||||||||||| ||||    
T  39842529 aagtctttcatgaaaagatgagatttcttgggattgtttttcttttaaaagttaccatct 39842470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 9 - 149
Target Start/End: Original strand, 40246915 - 40247055
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||| ||||||||||||||||||||||||| ||| |||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||  || ||||    
T  40246915 gtctagtggtattcaaaatcattcaaatttggaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttggcatgaaa 40247014  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||||||||||||||| |||||||| |||  ||||||||||    
T  40247015 aagtctttcatgaaaacatgagattccttatgattgttttt 40247055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 44762172 - 44762032
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||| |||||||| ||||| |||||| ||||||| |||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || ||||    
T  44762172 gtctagtggtatttaaaattattcaagtttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaa 44762073  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||||||| ||||||| |||||||||||| |||||||||||    
T  44762072 aagtcttttatgaaaacatgagatttcttaagattgttttt 44762032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 14 - 137
Target Start/End: Complemental strand, 33996671 - 33996548
Alignment:
Q  14 gtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtc 113  Q
    ||||||||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||| |||||||| ||||| ||||||| || |||||||||    
T  33996671 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgagggattttctagtgaaattttagcatgaaaaagtc 33996572  T
Q  114 tttcatgaaaagatgagatttctt 137  Q
    ||| || |||| ||||||||||||    
T  33996571 ttttataaaaacatgagatttctt 33996548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 9 - 168
Target Start/End: Complemental strand, 23753521 - 23753383
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||                    ||||||||||||||||||||||||    
T  23753521 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggatt--------------------ttgtagtgtaattttaacaagaaa 23753442  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttactatct 168  Q
    |||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||    
T  23753441 aagtctttcatg-aaagatgagatttcttgagattgtttttgttttaaaagttactatct 23753383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 16 - 149
Target Start/End: Original strand, 25418444 - 25418577
Alignment:
Q  16 ggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctt 115  Q
    |||||||||||||||||||||||  || |||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||  || |||||||| ||    
T  25418444 ggtattcaaaatcattcaaatttgaaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttggcatgaaaaagtatt 25418543  T
Q  116 tcatgaaaagatgagatttcttgagattgttttt 149  Q
    ||||||||| |||||||| |||  ||||||||||    
T  25418544 tcatgaaaacatgagattccttaggattgttttt 25418577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 9 - 134
Target Start/End: Original strand, 35337806 - 35337930
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||| |||||||||||||  |||||||||||||| |||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || ||||    
T  35337806 gtctagtggtattcaaaaaaattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 35337905  T
Q  109 aagtctttcatgaaaagatgagattt 134  Q
    |||| ||||||||||| |||||||||    
T  35337906 aagt-tttcatgaaaacatgagattt 35337930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 80 - 157
Target Start/End: Original strand, 45862983 - 45863060
Alignment:
Q  80 ggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttattttaaa 157  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  45862983 ggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttcttttaaa 45863060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 53929263 - 53929123
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||| |||||||||||||||||| |||| ||||| |||||||||||||||  |||||||||||||||||| ||||||| ||||| ||||||| || ||||    
T  53929263 gtctagtggtattcaaaatcatttaaatatcgaacgattgtttaataaataagattttgatggattttgtaggattttctagtgaaattttagcatgaaa 53929164  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    || ||||| ||||||| ||||||||| ||  ||||||||||    
T  53929163 aaatctttaatgaaaacatgagattttttaggattgttttt 53929123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 12 - 171
Target Start/End: Original strand, 10660609 - 10660744
Alignment:
Q  12 ttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaag 111  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||          ||||||||||||||||||||||||            
T  10660609 ttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgat----------ggattttgtagtgtaattttaaca-------- 10660690  T
Q  112 tctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttactatctttt 171  Q
          ||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  10660691 ------atgaaaagatgagatttcttgagattgtttttattttaaaagttactatttttt 10660744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 14 - 129
Target Start/End: Complemental strand, 51699610 - 51699495
Alignment:
Q  14 gtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtc 113  Q
    ||||||||||||||||||||||||||||| ||||| |||||||||  |||||||||| ||||||||||||||| ||||| ||||||| || |||||| ||    
T  51699610 gtggtattcaaaatcattcaaatttcgaaggattggttaataaataagattttgatgaattttgtgggattttctagtgaaattttagcatgaaaaaatc 51699511  T
Q  114 tttcatgaaaagatga 129  Q
    |||| |||||| ||||    
T  51699510 tttcgtgaaaacatga 51699495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 14 - 109
Target Start/End: Original strand, 22057838 - 22057933
Alignment:
Q  14 gtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaa 109  Q
    |||||||| |||||||||||||||||||  |||||||||||||||  |||||||||||||||||||||||||| ||||| |||||||||| |||||    
T  22057838 gtggtatttaaaatcattcaaatttcgatggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttaacatgaaaa 22057933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 9 - 136
Target Start/End: Original strand, 29030076 - 29030203
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||||||||||||||||||||||||||||| ||| |||||||||||||||  |||||||||||||||||||| ||||| || || |||||||||| |||     
T  29030076 gtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtggaattttctaatgaaattttaacatgaat 29030175  T
Q  109 aagtctttcatgaaaagatgagatttct 136  Q
       | ||| ||||||| |||||||||||    
T  29030176 tttttttttatgaaaacatgagatttct 29030203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 61 - 149
Target Start/End: Complemental strand, 6131316 - 6131228
Alignment:
Q  61 gattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||||||||||||||||||||||||| ||||| ||||||| || |||||||||||||||||||| ||||||||||||  ||||||||||    
T  6131316 gattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgttttt 6131228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 9 - 137
Target Start/End: Original strand, 52114600 - 52114728
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||| |||||||||||||| |||||||||||| | |||||||||||||||  ||||||||| |||||||||| ||||| ||||  ||||||| || ||||    
T  52114600 gtctagtggtattcaaaataattcaaatttcgcaggattgtttaataaatcagattttgatagattttgtggaattttctagtaaaattttagcatgaaa 52114699  T
Q  109 aagtctttcatgaaaagatgagatttctt 137  Q
    || |||||  |||||| ||||||||||||    
T  52114700 aaatcttttgtgaaaacatgagatttctt 52114728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 69 - 161
Target Start/End: Complemental strand, 15492942 - 15492850
Alignment:
Q  69 tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagtt 161  Q
    |||||||||| |||| || ||||| ||||||||||||||||| |||||||||||   || |||||||||||||||||||||||||||||||||    
T  15492942 tggattttgtaggatattctagtgaaattttaacaagaaaaaatctttcatgaagtcataagatttcttgagattgtttttattttaaaagtt 15492850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 69 - 161
Target Start/End: Original strand, 44276506 - 44276598
Alignment:
Q  69 tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagtt 161  Q
    |||||||||||||||||| ||||| ||||||||||||||||| ||||||||||| | ||||||||| ||| |||| ||||| |||||||||||    
T  44276506 tggattttgtgggattttctagtgaaattttaacaagaaaaaatctttcatgaagacatgagattttttgggattatttttcttttaaaagtt 44276598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 9 - 72
Target Start/End: Complemental strand, 539539 - 539476
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatgga 72  Q
    |||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||    
T  539539 gtcttgtggtattcaaaatcattcaaatttcgaaggattatttaataaattggattttgatgga 539476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 18 - 100
Target Start/End: Original strand, 55235264 - 55235347
Alignment:
Q  18 tattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatgga-ttttgtgggattttgtagtgtaatttta 100  Q
    ||||||||||||||||||||||||| |||||||||||||||||| |||||||||| |||||||||||||| || || |||||||    
T  55235264 tattcaaaatcattcaaatttcgaaagattgtttaataaattggtttttgatggatttttgtgggattttctaatgaaatttta 55235347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 9 - 86
Target Start/End: Complemental strand, 1440087 - 1440010
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggatttt 86  Q
    |||| |||||||||||||||||||||||||| || |||||||||||||||  |||||||||||||||| |||||||||    
T  1440087 gtctagtggtattcaaaatcattcaaatttccaaggattgtttaataaatcagattttgatggattttatgggatttt 1440010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 9 - 149
Target Start/End: Original strand, 27899415 - 27899545
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||||||            |||||||| ||||||| ||||| ||||||| || ||||    
T  27899415 gtctggtggtattcaaaatcattcaaatttcgaaggattgtttaataaat----------cagattttgtaggattttctagtgaaattttagcatgaaa 27899504  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||||||||||||||| |||| |||||||  ||||||||||    
T  27899505 aagtctttcatgaaaacatgaaatttcttatgattgttttt 27899545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 33 - 149
Target Start/End: Complemental strand, 1440005 - 1439889
Alignment:
Q  33 aaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagat 132  Q
    |||||| ||| |||||||||||||||| ||||||||| |||||||||||||||| ||||  ||||||   | |||||||||||||| ||||| |||||||    
T  1440005 aaatttggaaggattgtttaataaattagattttgatagattttgtgggattttctagtaaaattttggtatgaaaaagtctttcacgaaaacatgagat 1439906  T
Q  133 ttcttgagattgttttt 149  Q
    || ||  ||||||||||    
T  1439905 tttttaggattgttttt 1439889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 9 - 76
Target Start/End: Original strand, 6975817 - 6975884
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggatttt 76  Q
    ||||||||||||||||||||||||||||||||||  ||| |||| ||||||||| ||||  |||||||    
T  6975817 gtcttgtggtattcaaaatcattcaaatttcgaagaattatttactaaattggaatttgtgggatttt 6975884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 14 - 76
Target Start/End: Original strand, 52080003 - 52080065
Alignment:
Q  14 gtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggatttt 76  Q
    ||||||||||||||||||||||||| ||| |||||||||||||||  |||||||  |||||||    
T  52080003 gtggtattcaaaatcattcaaattttgaaggattgtttaataaatcagattttgtgggatttt 52080065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 9 - 65
Target Start/End: Complemental strand, 23535946 - 23535890
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattt 65  Q
    |||||||||||||||||||||||||||||| ||| ||| ||||||| |||| |||||    
T  23535946 gtcttgtggtattcaaaatcattcaaatttagaaggatcgtttaattaattagattt 23535890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 146
Target Start/End: Complemental strand, 33807730 - 33807678
Alignment:
Q  94 aattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtt 146  Q
    ||||||| || |||||||||||||||||||| ||||||||||||  |||||||    
T  33807730 aattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgtt 33807678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 81 - 122
Target Start/End: Original strand, 12103733 - 12103774
Alignment:
Q  81 gattttgtagtgtaattttaacaagaaaaagtctttcatgaa 122  Q
    |||||| ||||| |||||||||||||| ||||||||||||||    
T  12103733 gattttctagtgaaattttaacaagaataagtctttcatgaa 12103774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 144; Significance: 7e-76; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 9 - 168
Target Start/End: Original strand, 10657479 - 10657638
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10657479 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 10657578  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttactatct 168  Q
    |||| |||||||||||||||| ||||||||||||||||||| ||||||||| ||||||||    
T  10657579 aagtatttcatgaaaagatgaaatttcttgagattgtttttcttttaaaaggtactatct 10657638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 12 - 170
Target Start/End: Original strand, 18177343 - 18177501
Alignment:
Q  12 ttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaag 111  Q
    ||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18177343 ttgtggtattcaaaatcattcaaatttcgaaggattgtttaattaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaag 18177442  T
Q  112 tctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttactatcttt 170  Q
    ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18177443 tctttaataaaaagatgagatttcttgagattgtttttattttaaaagttactatcttt 18177501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 9 - 171
Target Start/End: Original strand, 26788859 - 26789018
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26788859 gtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 26788958  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttactatctttt 171  Q
    |||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||||    
T  26788959 aagtctttcat---aagatgagatttcttgagattgtttttattttaaaagttactatctttt 26789018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 10 - 166
Target Start/End: Original strand, 25288233 - 25288389
Alignment:
Q  10 tcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaa 109  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||    
T  25288233 tcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgggattttgtagtgtaattttaacaagagaa 25288332  T
Q  110 agtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttactat 166  Q
     ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  25288333 cgtctttcatgaaaagatgagatttcttgagattgtttttcttttaaaagttactat 25288389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 9 - 168
Target Start/End: Original strand, 28844628 - 28844787
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||| |||||||||||||||||||| ||||||    
T  28844628 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattagattttgatggattttgtggaattttgtagtgtaattttaataagaaa 28844727  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttactatct 168  Q
    ||||||||||| ||||||||||||||||||||||||||||| |||||||||||| |||||    
T  28844728 aagtctttcataaaaagatgagatttcttgagattgtttttcttttaaaagttagtatct 28844787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 9 - 168
Target Start/End: Original strand, 33135696 - 33135854
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33135696 gtctcgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 33135795  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttactatct 168  Q
    ||||||||||| |||| |||||||||||||||||||||||| |||||||||||| |||||    
T  33135796 aagtctttcat-aaaaaatgagatttcttgagattgtttttcttttaaaagttattatct 33135854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 26 - 168
Target Start/End: Original strand, 43078653 - 43078795
Alignment:
Q  26 atcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaag 125  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||| ||||||||||||||| |||||    
T  43078653 atcattcaaatttcgaatgattgtttaataaattggattttcatggattttgtgggattttatagtgtaattttaacatgaaaaagtctttcataaaaag 43078752  T
Q  126 atgagatttcttgagattgtttttattttaaaagttactatct 168  Q
    || ||||||||||||||||||||| |||||||||||| |||||    
T  43078753 ataagatttcttgagattgtttttgttttaaaagttagtatct 43078795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 9 - 164
Target Start/End: Complemental strand, 28740420 - 28740275
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||          ||||||||||||||||||    
T  28740420 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgg----------tgtaattttaacaagaaa 28740331  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttact 164  Q
    ||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||    
T  28740330 aagtctttcataaaaagatgagatttcttgagattgtttttcttttaaaagttact 28740275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 9 - 168
Target Start/End: Original strand, 3463745 - 3463894
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    ||||||||||||| |||||||||||| |||| || ||||||||||||||||||||||||||||||          |||||||||||||||||||||||||    
T  3463745 gtcttgtggtatttaaaatcattcaattttcaaaggattgtttaataaattggattttgatggat----------tttgtagtgtaattttaacaagaaa 3463834  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttactatct 168  Q
    |||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||    
T  3463835 aagtctttcatgaaaatatgagatttcttgagattgtttttgttttaaaagttactatct 3463894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 9 - 149
Target Start/End: Original strand, 12407453 - 12407593
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||| ||||||||||||||||||||||||| ||| |||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || ||||    
T  12407453 gtctagtggtattcaaaatcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttaccatgaaa 12407552  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||||||||||||||| |||||||||||| |||||||||||    
T  12407553 aagtctttcatgaaaacatgagatttcttaagattgttttt 12407593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 9 - 168
Target Start/End: Complemental strand, 13833559 - 13833410
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    ||||| |||||||||||||||||||||||| ||| ||||||||||||||||||||||||          |||||||||||||||||||||||||||||||    
T  13833559 gtcttctggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttg----------tgggattttgtagtgtaattttaacaagaaa 13833470  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttactatct 168  Q
    ||||||||||||| |||||||||||||||||||||| |||| |||||||| |||||||||    
T  13833469 aagtctttcatgacaagatgagatttcttgagattgcttttcttttaaaaattactatct 13833410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 9 - 149
Target Start/End: Original strand, 16269764 - 16269904
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || ||||    
T  16269764 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttatagtgaaattttagcatgaaa 16269863  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||||||||||||||| ||||||||||||  ||||||||||    
T  16269864 aagtctttcatgaaaacatgagatttcttaggattgttttt 16269904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 9 - 149
Target Start/End: Original strand, 24776428 - 24776568
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || ||||    
T  24776428 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 24776527  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||||||||||||||| ||||||||||||  ||||||||||    
T  24776528 aagtctttcatgaaaacatgagatttcttaggattgttttt 24776568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 9 - 149
Target Start/End: Original strand, 20605309 - 20605449
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||| |||||||||||||||||| |||||||||| |||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || ||||    
T  20605309 gtctagtggtattcaaaatcattaaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 20605408  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||||||||||||||| ||||||||||||  ||||||||||    
T  20605409 aagtctttcatgaaaacatgagatttcttaggattgttttt 20605449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 31170761 - 31170621
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||| |||||||||||||||||||||||||| || |||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || ||||    
T  31170761 gtctagtggtattcaaaatcattcaaatttccaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 31170662  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||||||||||||||| ||||||||||||  ||||||||||    
T  31170661 aagtctttcatgaaaacatgagatttcttaggattgttttt 31170621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 14 - 149
Target Start/End: Complemental strand, 14198709 - 14198574
Alignment:
Q  14 gtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtc 113  Q
    ||||||||||||||||||||||||||||| |||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || |||||| ||    
T  14198709 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaattc 14198610  T
Q  114 tttcatgaaaagatgagatttcttgagattgttttt 149  Q
    ||||||||||| ||||||||||||  ||||||||||    
T  14198609 tttcatgaaaacatgagatttcttaggattgttttt 14198574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 22551900 - 22551760
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||| |||||||||||||| |||||||||||||||||||||||| ||||||  ||||||||||||||||||||||||| ||||| ||||||| || ||||    
T  22551900 gtctagtggtattcaaaattattcaaatttcgaatgattgtttattaaattaaattttgatggattttgtgggattttctagtgaaattttagcatgaaa 22551801  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||| ||||||||||| ||||||||||||  ||||||||||    
T  22551800 aagtatttcatgaaaacatgagatttcttatgattgttttt 22551760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 9 - 149
Target Start/End: Original strand, 35317135 - 35317275
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||||||  |||||||||||||||||||| ||||| ||||| ||||||| || ||||    
T  35317135 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaa 35317234  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||||||||||||||| || ||||||||| | |||||||||    
T  35317235 aagtctttcatgaaaacataagatttcttaacattgttttt 35317275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 14 - 137
Target Start/End: Original strand, 32125331 - 32125454
Alignment:
Q  14 gtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtc 113  Q
    ||||||||||||||||||||||||||||| |||||||||||||||  |||||||||||||||||||||||||| ||||  ||||||| || |||||||||    
T  32125331 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtaaaattttagcatgaaaaagtc 32125430  T
Q  114 tttcatgaaaagatgagatttctt 137  Q
    ||||||||||| ||||||||||||    
T  32125431 tttcatgaaaatatgagatttctt 32125454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 15 - 168
Target Start/End: Original strand, 379016 - 379159
Alignment:
Q  15 tggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtct 114  Q
    |||||||||||||||||||||||| ||| |||||||||||||||||||||||||| ||||          |||||||||||||||||||||||||| ||     
T  379016 tggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatagatt----------ttgtagtgtaattttaacaagaaaaaatcg 379105  T
Q  115 ttcatgaaaagatgagatttcttgagattgtttttattttaaaagttactatct 168  Q
    |||||||||||||||||||| |||||||||||||| |||||||| |||||||||    
T  379106 ttcatgaaaagatgagatttattgagattgtttttcttttaaaacttactatct 379159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 9 - 147
Target Start/End: Complemental strand, 305602 - 305464
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||| ||||||||||||||||||||||||| |||||||||||||||||||  ||||| ||||||||||||| |||||| ||||| |||||||  | ||||    
T  305602 gtctagtggtattcaaaatcattcaaattttgaatgattgtttaataaatcagatttcgatggattttgtgagattttctagtgaaattttagaatgaaa 305503  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttt 147  Q
    |||||||||||||||| ||||||||||||  ||||||||    
T  305502 aagtctttcatgaaaacatgagatttcttaggattgttt 305464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 17 - 149
Target Start/End: Complemental strand, 5093176 - 5093044
Alignment:
Q  17 gtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtcttt 116  Q
    |||||||||||||||||||||| ||| |||||||||||||||  |||||||||||||||||||||||||| || || ||||||| || ||||||||||||    
T  5093176 gtattcaaaatcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtcttt 5093077  T
Q  117 catgaaaagatgagatttcttgagattgttttt 149  Q
    ||| |||| ||||||||||||  ||||||||||    
T  5093076 cataaaaacatgagatttcttaggattgttttt 5093044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 80 - 168
Target Start/End: Complemental strand, 6224633 - 6224545
Alignment:
Q  80 ggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttactatct 168  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  6224633 ggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgatattgtttttcttttaaaagttactatct 6224545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 17 - 149
Target Start/End: Original strand, 43847727 - 43847859
Alignment:
Q  17 gtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtcttt 116  Q
    |||||||||||||||||||||||||| |||||||||||||||  || ||||||||||||||||| ||||| ||||| ||||||| || |||||||||| |    
T  43847727 gtattcaaaatcattcaaatttcgaaggattgtttaataaatcagaatttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctgt 43847826  T
Q  117 catgaaaagatgagatttcttgagattgttttt 149  Q
    |||||||| ||||||||||||  ||||||||||    
T  43847827 catgaaaacatgagatttcttaggattgttttt 43847859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 9 - 124
Target Start/End: Original strand, 1789515 - 1789630
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||||||  |||||||||||||||||||||||||| || || ||||||| || ||||    
T  1789515 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaa 1789614  T
Q  109 aagtctttcatgaaaa 124  Q
    ||||||||||| ||||    
T  1789615 aagtctttcatcaaaa 1789630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 80 - 168
Target Start/End: Complemental strand, 215303 - 215216
Alignment:
Q  80 ggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttactatct 168  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||    
T  215303 ggattttgtagtgtaattttaaca-gaaaaagtctttcatgaaaagatgagatttcatgagattgtttttcttttaaaagttactatct 215216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 18 - 149
Target Start/End: Original strand, 9120208 - 9120339
Alignment:
Q  18 tattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttc 117  Q
    |||||||||||||||| ||||  || |||||||||||||||| |||||||||||||||||||||||||| ||||| |||||||  | | |||| ||||||    
T  9120208 tattcaaaatcattcagattttaaaggattgtttaataaattagattttgatggattttgtgggattttctagtgaaattttagtatggaaaaatctttc 9120307  T
Q  118 atgaaaagatgagatttcttgagattgttttt 149  Q
    ||||||| ||||||||||||  ||||||||||    
T  9120308 atgaaaacatgagatttcttaggattgttttt 9120339  T

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Target: chr2; HSP #28
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 9 - 117
Target Start/End: Original strand, 7026677 - 7026775
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||          |||||||||||||||||||||||||||||    
T  7026677 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgat----------ggattttgtagtgtaattttaacaagaaa 7026766  T

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Target: chr2; HSP #29
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 18 - 161
Target Start/End: Complemental strand, 10125418 - 10125285
Alignment:
Q  18 tattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttc 117  Q
    |||||||||||||||||||||| || ||||||||||||||||| ||||||          ||||||||| ||||| ||||||||||||||||||||||||    
T  10125418 tattcaaaatcattcaaatttcaaaggattgtttaataaattgaattttg----------tgggattttttagtgaaattttaacaagaaaaagtctttc 10125329  T
Q  118 atgaaaagatgagatttcttgagattgtttttattttaaaagtt 161  Q
    || |||| | |||||||||| ||||||||||| |||||||||||    
T  10125328 ataaaaacacgagatttcttaagattgtttttcttttaaaagtt 10125285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 100 - 171
Target Start/End: Original strand, 7027051 - 7027122
Alignment:
Q  100 aacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttactatctttt 171  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7027051 aacaagaaaaaatctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttactatctttt 7027122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 9 - 100
Target Start/End: Original strand, 44765848 - 44765939
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatttta 100  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||||||  |||||||||||||||||||||||||| ||||| |||||||    
T  44765848 gtctagtggtattcaaaatcattcaaatttcgaaagattgtttaataaataagattttgatggattttgtgggattttctagtgaaatttta 44765939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 9 - 67
Target Start/End: Original strand, 3574920 - 3574978
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttg 67  Q
    |||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  3574920 gtcttgtgatattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 3574978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 80 - 158
Target Start/End: Original strand, 3574971 - 3575049
Alignment:
Q  80 ggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaa 158  Q
    ||||||||||||||||||||||||| ||||| | |||| | ||||| ||||||||||||||||||||||| ||||||||    
T  3574971 ggattttgtagtgtaattttaacaaaaaaaaatatttcgtaaaaagttgagatttcttgagattgtttttcttttaaaa 3575049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 9 - 67
Target Start/End: Complemental strand, 6224684 - 6224626
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttg 67  Q
    ||||||||||||||||||| |||||||||||||| |||| |||||||||||||||||||    
T  6224684 gtcttgtggtattcaaaattattcaaatttcgaaggattatttaataaattggattttg 6224626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 14 - 76
Target Start/End: Complemental strand, 26601332 - 26601270
Alignment:
Q  14 gtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggatttt 76  Q
    ||||||||||||||||||||||||||||||| |||||||||||||  |||||||  |||||||    
T  26601332 gtggtattcaaaatcattcaaatttcgaatgtttgtttaataaatcagattttgtgggatttt 26601270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 65
Target Start/End: Complemental strand, 21370687 - 21370631
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattt 65  Q
    |||||||||||||||||||||||||||||| |||  ||||||| |||||||||||||    
T  21370687 gtcttgtggtattcaaaatcattcaaattttgaagtattgtttgataaattggattt 21370631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 140; Significance: 2e-73; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 13 - 168
Target Start/End: Complemental strand, 58207 - 58052
Alignment:
Q  13 tgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagt 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| |    
T  58207 tgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtataattttaacaagagaaaat 58108  T
Q  113 ctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttactatct 168  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  58107 ctttcatgaaaagatgagatttcttgagattgtttttcttttaaaagttactatct 58052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0543 (Bit Score: 139; Significance: 7e-73; HSPs: 1)
Name: scaffold0543
Description:

Target: scaffold0543; HSP #1
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 10 - 168
Target Start/End: Original strand, 10633 - 10791
Alignment:
Q  10 tcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaa 109  Q
    |||||||||||||||||||||||||||||| || ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||    
T  10633 tcttgtggtattcaaaatcattcaaatttcaaaggattgtttaataaattgaattttgatggattttatgggattttgtagtgtaattttaacaagaaaa 10732  T
Q  110 agtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttactatct 168  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  10733 agtctttcatgaaaagatgagatttcttgagattgtttttgttttaaaagttactatct 10791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 136; Significance: 4e-71; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 13 - 168
Target Start/End: Complemental strand, 39748 - 39593
Alignment:
Q  13 tgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagt 112  Q
    ||||||||||||||||||||||| |||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39748 tgtggtattcaaaatcattcaaacttcgaaggattatttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagt 39649  T
Q  113 ctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttactatct 168  Q
    ||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||    
T  39648 ctttcatgaaaagataagatttcttgagattgtttttcttttaaaagttactatct 39593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 118; Significance: 2e-60; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 9 - 146
Target Start/End: Complemental strand, 37042 - 36905
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||||| |||||||||||||||| ||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37042 gtcttgaggtattcaaaatcattaaaatttcgaagcattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 36943  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgtt 146  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  36942 aagtctttcatgaaaagataagatttcttgagattgtt 36905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1504 (Bit Score: 110; Significance: 1e-55; HSPs: 1)
Name: scaffold1504
Description:

Target: scaffold1504; HSP #1
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 9 - 168
Target Start/End: Original strand, 936 - 1091
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    ||||||||||||||||||||||||||||||||||  ||| |||||||||| | ||||||||||||||||||||||||||||||||||||||||| |||||    
T  936 gtcttgtggtattcaaaatcattcaaatttcgaagaattatttaataaatag-attttgatggattttgtgggattttgtagtgtaattttaactagaaa 1034  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttactatct 168  Q
    ||||||||||| |||| ||||||||||||||||||||||   ||||||||||||||||||    
T  1035 aagtctttcattaaaatatgagatttcttgagattgttt---ttttaaaagttactatct 1091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0839 (Bit Score: 107; Significance: 8e-54; HSPs: 1)
Name: scaffold0839
Description:

Target: scaffold0839; HSP #1
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 38 - 168
Target Start/End: Complemental strand, 3798 - 3668
Alignment:
Q  38 tcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 137  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||| | |||| ||    
T  3798 tcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaggtctttcataaaaagattatatttttt 3699  T
Q  138 gagattgtttttattttaaaagttactatct 168  Q
    |||||||||||| ||||||||||||||||||    
T  3698 gagattgtttttcttttaaaagttactatct 3668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 101; Significance: 3e-50; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 9 - 168
Target Start/End: Original strand, 13954 - 14103
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    ||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||          |||||||||  ||||||| ||||||    
T  13954 gtcttgtggtattcaaaatcattcaaatttcaaaagattgtttaataaattggattttgatggat----------tttgtagtgggattttaataagaaa 14043  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttactatct 168  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  14044 aagtctttcatgaaaagatgagatttcttgagattgtttttcttttaaaagttactatct 14103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 101; Significance: 3e-50; HSPs: 2)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 9 - 168
Target Start/End: Complemental strand, 21373 - 21224
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    ||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||          ||||  ||||||| ||||||    
T  21373 gtcttgtggtattcaaaatcattcaaatttcaaaagattgtttaataaattggattttgatggattttgt----------agtgggattttaataagaaa 21284  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttactatct 168  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  21283 aagtctttcatgaaaagatgagatttcttgagattgtttttcttttaaaagttactatct 21224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152; HSP #2
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 49 - 168
Target Start/End: Original strand, 28463 - 28573
Alignment:
Q  49 tttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttt 148  Q
    |||||||||||||||||||||||||||||         ||||||  ||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  28463 tttaataaattggattttgatggattttg---------gtagtgggattttaataagaaaaagtctttcatgaaaagatgagatttcttgagattgtttt 28553  T
Q  149 tattttaaaagttactatct 168  Q
    | ||||||||||||||||||    
T  28554 tcttttaaaagttactatct 28573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0400 (Bit Score: 93; Significance: 2e-45; HSPs: 1)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 15168 - 15028
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || ||||    
T  15168 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 15069  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||||||||||||||| |||| |||||||  ||||||||||    
T  15068 aagtctttcatgaaaacatgaaatttcttaggattgttttt 15028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0365 (Bit Score: 93; Significance: 2e-45; HSPs: 1)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 15811 - 15671
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || ||||    
T  15811 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 15712  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||||||||||||||| |||| |||||||  ||||||||||    
T  15711 aagtctttcatgaaaacatgaaatttcttaggattgttttt 15671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 93; Significance: 2e-45; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 9 - 149
Target Start/End: Original strand, 102167 - 102307
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || ||||    
T  102167 gtctagtggtattcaaaatcattcaaatttcgaaagattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 102266  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    ||||||||||| |||| ||||||||||||  ||||||||||    
T  102267 aagtctttcataaaaatatgagatttcttatgattgttttt 102307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 92; Significance: 7e-45; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 69 - 168
Target Start/End: Original strand, 14892 - 14991
Alignment:
Q  69 tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttactatct 168  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  14892 tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttaagattgtttttcttttaaaagttactatct 14991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 89; Significance: 5e-43; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 38739 - 38600
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||| ||||||||||||||||||||||||||||| ||||||||||||| |  |||||||||||||||||||||||||| ||||| ||||||| || ||||    
T  38739 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataa-tcagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 38641  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||||||||||||||| ||||||||||||  ||||||||||    
T  38640 aagtctttcatgaaaacatgagatttcttaggattgttttt 38600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 89; Significance: 5e-43; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 9 - 137
Target Start/End: Original strand, 100283 - 100411
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||| |||||||||||||||||||||||||| || |||||||||||||||   |||||||||||||||||||| |||| ||||| |||||||||||||||    
T  100283 gtctagtggtattcaaaatcattcaaatttcaaaggattgtttaataaatcaaattttgatggattttgtgggtttttctagtgaaattttaacaagaaa 100382  T
Q  109 aagtctttcatgaaaagatgagatttctt 137  Q
    |||||||||||||||| ||||||||||||    
T  100383 aagtctttcatgaaaacatgagatttctt 100411  T

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Target: scaffold0113 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 39030 - 38890
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 108  Q
    |||| ||| ||||||||||||||||||||| ||| |||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||  || ||||    
T  39030 gtctagtgatattcaaaatcattcaaatttggaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttggcatgaaa 38931  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||||||||||||||| |||||||| |||  ||||||||||    
T  38930 aagtctttcatgaaaacatgagattccttaggattgttttt 38890  T

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Target: scaffold0276 (Bit Score: 65; Significance: 9e-29; HSPs: 1)
Name: scaffold0276
Description:

Target: scaffold0276; HSP #1
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 14 - 154
Target Start/End: Complemental strand, 669 - 529
Alignment:
Q  14 gtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtc 113  Q
    ||||||||||||||||||||||||| ||| |||||||||||||||   ||||||||||||||||||| ||||| ||||| ||||||   | |||||||||    
T  669 gtggtattcaaaatcattcaaatttggaaggattgtttaataaatcatattttgatggattttgtggaattttctagtgaaattttggtatgaaaaagtc 570  T
Q  114 tttcatgaaaagatgagatttcttgagattgtttttatttt 154  Q
    ||| | ||||| ||||||||||||  |||| ||||| ||||    
T  569 tttgacgaaaacatgagatttcttaggattttttttttttt 529  T

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Target: scaffold0922 (Bit Score: 58; Significance: 1e-24; HSPs: 1)
Name: scaffold0922
Description:

Target: scaffold0922; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 4272 - 4337
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggatt 74  Q
    |||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  4272 gtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatggatt 4337  T

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Target: scaffold0007 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 17 - 92
Target Start/End: Original strand, 199905 - 199980
Alignment:
Q  17 gtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtg 92  Q
    ||||| |||||||||||||||| ||| || |||||||||||||| |||||||| ||||||||| |||||| |||||    
T  199905 gtatttaaaatcattcaaattttgaaagagtgtttaataaattgaattttgattgattttgtgagattttttagtg 199980  T

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