View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16020_low_139 (Length: 204)
Name: NF16020_low_139
Description: NF16020
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16020_low_139 |
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Alignment Details
Target: chr3 (Bit Score: 195; Significance: 1e-106; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 1 - 195
Target Start/End: Original strand, 51805244 - 51805438
Alignment:
| Q |
1 |
agaaaatataacagtttacctccttgacagacatgttctggcaaagggccagacaacttgttttcggacaaatcaagaacaaccattccggaggattgtc |
100 |
Q |
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| T |
51805244 |
agaaaatataacagtttacctccttgacagacatgttctggcaaagggccagacaacttgttttcggacaaatcaagaacaaccattccggaggattgtc |
51805343 |
T |
|
| Q |
101 |
ctagtttcgcaggaacgtgtccacttaagaaattgtcgtaaagtgacaatattctaagtgtttttgagttttcaattgattttggaatttcacct |
195 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
51805344 |
ctagtttcgcaggaacgtgtccacttaagaaattgtcgtaaagtgacaatattctaagtgtttttgagttttcaattgattttggaatttcacct |
51805438 |
T |
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