View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16020_low_16 (Length: 526)

Name: NF16020_low_16
Description: NF16020
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16020_low_16
NF16020_low_16
[»] chr1 (5 HSPs)
chr1 (81-390)||(11405637-11405952)
chr1 (445-511)||(11405964-11406030)
chr1 (88-197)||(47643185-47643294)
chr1 (14-46)||(11405579-11405611)
chr1 (227-315)||(44650881-44650970)
[»] scaffold1657 (2 HSPs)
scaffold1657 (209-432)||(591-825)
scaffold1657 (81-149)||(474-542)
[»] chr2 (3 HSPs)
chr2 (83-317)||(38070533-38070776)
chr2 (95-151)||(25925143-25925199)
chr2 (239-354)||(28495262-28495378)
[»] chr5 (1 HSPs)
chr5 (278-362)||(31559374-31559459)
[»] chr7 (4 HSPs)
chr7 (101-188)||(30058170-30058258)
chr7 (81-150)||(24471347-24471416)
chr7 (81-150)||(24476295-24476364)
chr7 (82-317)||(21835405-21835643)
[»] chr8 (1 HSPs)
chr8 (96-390)||(14348803-14349099)
[»] chr3 (2 HSPs)
chr3 (91-191)||(26551607-26551708)
chr3 (97-197)||(32256845-32256946)
[»] chr4 (4 HSPs)
chr4 (83-151)||(36312062-36312130)
chr4 (83-151)||(36326271-36326339)
chr4 (287-378)||(26157010-26157102)
chr4 (96-183)||(26156819-26156907)
[»] scaffold1603 (1 HSPs)
scaffold1603 (83-222)||(1326-1466)
[»] chr6 (2 HSPs)
chr6 (99-191)||(26390946-26391039)
chr6 (214-267)||(34390560-34390613)


Alignment Details
Target: chr1 (Bit Score: 236; Significance: 1e-130; HSPs: 5)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 81 - 390
Target Start/End: Original strand, 11405637 - 11405952
Alignment:
Q  81 taaattacacctagtctctacaattattctcatagtctcacgacaaattatcaaaatagttctgatcaatccatgattcaaaactctcttctcaagttac 180  Q
    |||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| | |||||||||||||||||||||||||    
T  11405637 taaattgcacctagtctctacaattattctcatagtctcacgataaattatcaaaatagttctgatcaatccttaattcaaaactctcttctcaagttac 11405736  T
Q  181 aacaccctaatttcttaacgagtctgtgaccgttgaaggttttattaacgttaatttctatatcatgacctagcagtcatc-----tatccttagactaa 275  Q
    ||||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||| || |||||||||||     |||||||||||| |    
T  11405737 aacacccaaatttcttaacaagtctatgaccgttgaaggttttattaacgttaatttctatatcataacttagcagtcatctatcatatccttagactca 11405836  T
Q  276 tccgttagattaacataattattagatctaattcaatagctaagactcgtagttaattgatatttgaattcagtttatacgtgatc-agatgcaaaaagc 374  Q
    ||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||| |    
T  11405837 tccgttagattaacacaattattagatctaattcaatagctaaggctcgtagttaattgatatttgaattcagtttatacgtgatcaagatgcaaaaatc 11405936  T
Q  375 attaagagcaaacaat 390  Q
    ||||||||||||||||    
T  11405937 attaagagcaaacaat 11405952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 445 - 511
Target Start/End: Original strand, 11405964 - 11406030
Alignment:
Q  445 caatcaaaattaaaatcatctgaaagacccaatcaaaatgaaattagctaaacatggtgacataaat 511  Q
    ||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||    
T  11405964 caatcaaaattaaaatcatctaaaagacccgatcaaaatgaaattagctaaacatggtgacataaat 11406030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 88 - 197
Target Start/End: Original strand, 47643185 - 47643294
Alignment:
Q  88 cacctagtctctacaattattctcatagtctcacgacaaattatcaaaatagttctgatcaatccatgattcaaaactctcttctcaagttacaacaccc 187  Q
    ||||||| |||||||||||||||| ||   | ||||||||||| ||||||||||||||||||||  ||| ||||||||||||| | ||| ||||||||||    
T  47643185 cacctagcctctacaattattctcctaaatttacgacaaattaacaaaatagttctgatcaatctttgactcaaaactctcttttaaaggtacaacaccc 47643284  T
Q  188 taatttctta 197  Q
    |||| |||||    
T  47643285 taatctctta 47643294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 46
Target Start/End: Original strand, 11405579 - 11405611
Alignment:
Q  14 aaaataaaaaataagtgggataattagcttctt 46  Q
    |||||||||||||||||||||||||||||||||    
T  11405579 aaaataaaaaataagtgggataattagcttctt 11405611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 227 - 315
Target Start/End: Original strand, 44650881 - 44650970
Alignment:
Q  227 aacgttaatttctatatcatgacctagcagtcatctatccttagactaatccgttagattaac-ataattattagatctaattcaatagc 315  Q
    ||||||||||||||| |||| ||| |  | |||||||||| |||| | |   ||||||||||| ||||||| ||||||||||||||||||    
T  44650881 aacgttaatttctatgtcataaccaaataatcatctatccctagattgacatgttagattaaccataattaatagatctaattcaatagc 44650970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1657 (Bit Score: 54; Significance: 9e-22; HSPs: 2)
Name: scaffold1657
Description:

Target: scaffold1657; HSP #1
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 209 - 432
Target Start/End: Original strand, 591 - 825
Alignment:
Q  209 accgttgaaggttttatta--acgttaatttctatatcatgacctagcagtcatctatccttagactaatccgttagattaa-cataattattagatcta 305  Q
    |||||||||||||| || |  |||||||||||||| |||| ||||| || |||||||||| |||||| | |||||||||||| || |||||||||||| |    
T  591 accgttgaaggtttgatgagaacgttaatttctatgtcataacctaacaatcatctatccctagactgacccgttagattaaccagaattattagatcca 690  T
Q  306 attcaatagctaagactcgtagttaattgatatttgaattcagtttatacgtgatc-agatgcaaaaagcattaagagcaaa-------caataaaacta 397  Q
    ||||||||| ||  |   ||| | |||||| ||||||| ||| ||||||||||||| | || ||||| ||| ||||| ||||        ||||||||||    
T  691 attcaatagttagtatcagtaatcaattgacatttgaaatcattttatacgtgatcaatatacaaaaggcagtaagaacaaataattctgaataaaacta 790  T
Q  398 agattataatggaagtgaaaagagtttatacaatc 432  Q
     ||||||||| | | ||||||||||||||||||||    
T  791 ggattataattgcattgaaaagagtttatacaatc 825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1657; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 81 - 149
Target Start/End: Original strand, 474 - 542
Alignment:
Q  81 taaattacacctagtctctacaattattctcatagtctcacgacaaattatcaaaatagttctgatcaa 149  Q
    |||||| |||||||||||||||||||||||| ||   | ||||||||||| ||||||||||||||||||    
T  474 taaattgcacctagtctctacaattattctcctaaatttacgacaaattaacaaaatagttctgatcaa 542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 52; Significance: 1e-20; HSPs: 3)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 83 - 317
Target Start/End: Complemental strand, 38070776 - 38070533
Alignment:
Q  83 aattacacctagtctctacaattattctcatagtctcacgacaaattatcaaaa----tagttctgatcaatc-catgattcaaaactctcttctcaagt 177  Q
    |||| ||||||||||||| | |||||||  || | ||||||||||||| |||||    ||||||| ||||||  | ||| ||| | ||||||||||||||    
T  38070776 aattgcacctagtctctagagttattcttctaatttcacgacaaattaacaaaaaaaatagttctaatcaatttcttgactcagagctctcttctcaagt 38070677  T
Q  178 tacaacaccctaatttcttaac-gagtctgtgaccgttgaaggttttatt--aacgttaatttctatatcatgacctagcagtcatctatccttagacta 274  Q
    ||||||||||||||  ||||   ||||| || | |||||||||||||||   ||||||||||| ||| |||| ||||| || |||||||||| || | |     
T  38070676 tacaacaccctaatcacttaggtgagtccgtaagcgttgaaggttttatatgaacgttaatttttatgtcataacctaacaatcatctatccctaaattg 38070577  T
Q  275 atccgttagattaa-cataattattagatctaattcaatagcta 317  Q
    | |||||||||||| ||||||||||| ||  |||||||||||||    
T  38070576 acccgttagattaaccataattattatattcaattcaatagcta 38070533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 95 - 151
Target Start/End: Original strand, 25925143 - 25925199
Alignment:
Q  95 tctctacaattattctcatagtctcacgacaaattatcaaaatagttctgatcaatc 151  Q
    ||||||||||||||||| || ||| |||| |||||| |||||||||| |||||||||    
T  25925143 tctctacaattattctcttaatctgacgataaattaacaaaatagttttgatcaatc 25925199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 239 - 354
Target Start/End: Original strand, 28495262 - 28495378
Alignment:
Q  239 tatatcatgacctagcagtcatctatccttagactaatccgttagattaac-ataattattagatctaattcaatagctaagactcgtagttaattgata 337  Q
    |||||||| ||||| | |||||||||||||||| | |  |||||||||||| | ||||||| |||| |||||||||| ||| |   ||||| |||||||     
T  28495262 tatatcataacctaacggtcatctatccttagattgactcgttagattaactagaattatttgatcaaattcaatagttaatatcagtagtcaattgatg 28495361  T
Q  338 tttgaattcagtttata 354  Q
    |||||| ||| ||||||    
T  28495362 tttgaaatcattttata 28495378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 278 - 362
Target Start/End: Original strand, 31559374 - 31559459
Alignment:
Q  278 cgttagattaac-ataattattagatctaattcaatagctaagactcgtagttaattgatatttgaattcagtttatacgtgatca 362  Q
    |||||||||||| |||||||||||||| |||||||||||||   || ||||| |||||||||||||| | ||||||||||||||||    
T  31559374 cgttagattaaccataattattagatccaattcaatagctagagctagtagtcaattgatatttgaaattagtttatacgtgatca 31559459  T

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Target: chr7 (Bit Score: 45; Significance: 2e-16; HSPs: 4)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 101 - 188
Target Start/End: Original strand, 30058170 - 30058258
Alignment:
Q  101 caattattctcatagtctcacgacaaattatcaaaatagttctgatcaat-ccatgattcaaaactctcttctcaagttacaacaccct 188  Q
    ||||||||||| |||||||||||||||||| |||||||||| |||||||| || ||| ||||||| ||||||| ||  |||||||||||    
T  30058170 caattattctcctagtctcacgacaaattaacaaaatagttttgatcaatcccttgactcaaaacactcttctaaaactacaacaccct 30058258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 81 - 150
Target Start/End: Complemental strand, 24471416 - 24471347
Alignment:
Q  81 taaattacacctagtctctacaattattctcatagtctcacgacaaattatcaaaatagttctgatcaat 150  Q
    |||||| || |||| |||||||||||||||| ||||||||||| |||||| ||||||||  |||||||||    
T  24471416 taaattgcaactagactctacaattattctcctagtctcacgaaaaattaacaaaatagccctgatcaat 24471347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 81 - 150
Target Start/End: Complemental strand, 24476364 - 24476295
Alignment:
Q  81 taaattacacctagtctctacaattattctcatagtctcacgacaaattatcaaaatagttctgatcaat 150  Q
    |||||| || |||| |||||||||||||||| ||||||||||| |||||| ||||||||  |||||||||    
T  24476364 taaattgcaactagactctacaattattctcctagtctcacgaaaaattaacaaaatagccctgatcaat 24476295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 82 - 317
Target Start/End: Original strand, 21835405 - 21835643
Alignment:
Q  82 aaattacacctagtctctacaattattctcatagtctcacgacaaattatcaaaatagttctgatcaat-ccatgattcaaaactctcttctcaagttac 180  Q
    ||||| |||||||| ||||||||||||||| || |  || ||||||||  |||||||||||| |||||| || |||   | |||||| |||| ||  |||    
T  21835405 aaattgcacctagtttctacaattattctcctaattccatgacaaattgacaaaatagttctaatcaatcccttgaaatacaactcttttctaaaactac 21835504  T
Q  181 aacaccctaatttctta-acgagtctgtgaccgttgaaggttttattaacgttaatttctatatcatgacctagcagtcatctatccttagactaatccg 279  Q
    |||||||||||  ||||   || ||  | |||||||||||||| || || |||  |||||||||||| ||||| || |||| ||| | |||||| | | |    
T  21835505 aacaccctaatcccttaggtgattccttaaccgttgaaggtttgatgaatgttggtttctatatcataacctaacaatcatgtattcatagactgacctg 21835604  T
Q  280 ttagatt-aacataattattagatctaattcaatagcta 317  Q
     |||||| |||| |||||||||||| ||||||| |||||    
T  21835605 ctagattaaacagaattattagatccaattcaaaagcta 21835643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 44; Significance: 8e-16; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 96 - 390
Target Start/End: Complemental strand, 14349099 - 14348803
Alignment:
Q  96 ctctacaattattctcatagtctcacgacaaattatcaaaatagttctgatcaat-ccatgattcaaaactctcttctcaagttacaacaccctaatttc 194  Q
    ||||||||||||| |  |||||| || | |||||| |||||||||| |||||||| || ||| ||| ||| ||||||| ||| |||||||||||||| ||    
T  14349099 ctctacaattatttttttagtcttactagaaattaacaaaatagttttgatcaatcccttgactcagaacactcttctaaagctacaacaccctaatctc 14349000  T
Q  195 tta-acgagtctgtgaccgttgaaggttttattaacgttaatttctatatcatgacctagcagtcatctatccttagactaatccgttagattaa-cata 292  Q
    ||| |  ||||||| | | ||  ||| ||||| ||||||||||  ||| |||  ||||| || ||| |||||| ||  |||| |||||||||||| || |    
T  14348999 ttagatcagtctgtaatcatt--aggctttatgaacgttaattcttatgtcacaacctaacaatcaactatccctaagctaacccgttagattaatcaga 14348902  T
Q  293 attattagatctaattcaatagctaagactcgtagttaattgatatttgaattcagtttatacgtgatca-gatgcaaaaagcattaagagcaaacaat 390  Q
     |||||||||| ||||||||| ||| | || ||||    |||||| ||||||| |||||||| |||||||  ||  ||||||||||| ||| |||||||    
T  14348901 cttattagatccaattcaataactagggctagtagcatgttgatagttgaatttagtttatatgtgatcattatataaaaagcattatgagaaaacaat 14348803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 38; Significance: 0.000000000003; HSPs: 2)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 91 - 191
Target Start/End: Complemental strand, 26551708 - 26551607
Alignment:
Q  91 ctagtctctacaattattctcatagtctcacgacaaattatcaaaatagttctgatcaatc-catgattcaaaactctcttctcaagttacaacacccta 189  Q
    ||||||||||||||||||||| || | || |||||||||| ||||||| |  ||||||||| | ||| ||| ||||| ||||| ||| ||||||||||||    
T  26551708 ctagtctctacaattattctcttaatttcgcgacaaattaacaaaataatgttgatcaatctcttgactcataactcacttctaaagctacaacacccta 26551609  T
Q  190 at 191  Q
    ||    
T  26551608 at 26551607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 97 - 197
Target Start/End: Complemental strand, 32256946 - 32256845
Alignment:
Q  97 tctacaattattctcatagtctcacgacaaattatcaaaatagttctgatcaatc-catgattcaaaactctcttctcaagttacaacaccctaatttct 195  Q
    ||||||||||||||  |||| |||||| | || | ||||||| || ||||||||| | ||||| |||||||| |||| |||||||||| ||||||| |||    
T  32256946 tctacaattattctattagtttcacgatacatcaacaaaatatttttgatcaatctcttgatttaaaactctattctaaagttacaaccccctaatctct 32256847  T
Q  196 ta 197  Q
    ||    
T  32256846 ta 32256845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 37; Significance: 0.00000000001; HSPs: 4)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 83 - 151
Target Start/End: Original strand, 36312062 - 36312130
Alignment:
Q  83 aattacacctagtctctacaattattctcatagtctcacgacaaattatcaaaatagttctgatcaatc 151  Q
    |||| ||||||||||||||||||||||||  | | |||| || ||||| ||||||||||||||||||||    
T  36312062 aatttcacctagtctctacaattattctccaattttcacaactaattaacaaaatagttctgatcaatc 36312130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 83 - 151
Target Start/End: Original strand, 36326271 - 36326339
Alignment:
Q  83 aattacacctagtctctacaattattctcatagtctcacgacaaattatcaaaatagttctgatcaatc 151  Q
    |||| ||||||||||||||||||||||||  | | |||| || ||||| ||||||||||||||||||||    
T  36326271 aatttcacctagtctctacaattattctccaattttcacaactaattaacaaaatagttctgatcaatc 36326339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 287 - 378
Target Start/End: Original strand, 26157010 - 26157102
Alignment:
Q  287 aacataattattagatctaattcaatagctaagactcgtagttaattgatatttgaattcagtttatacgtgatc-agatgcaaaaagcatta 378  Q
    |||| |||||||||||| ||||||| | ||| |||| ||||| ||||||||||| |||||| || ||| |||||| ||||  |||||||||||    
T  26157010 aacaaaattattagatcgaattcaacaactatgactagtagtcaattgatatttaaattcatttaatatgtgatcaagatataaaaagcatta 26157102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 96 - 183
Target Start/End: Original strand, 26156819 - 26156907
Alignment:
Q  96 ctctacaattattctcatagtctcacgacaaattatcaaaatagttctgatcaatc-catgattcaaaactctcttctcaagttacaac 183  Q
    ||||||||||||| ||||||| |||||| |||||| ||||||| |||  |||||||   ||||||||||| ||| ||| | ||||||||    
T  26156819 ctctacaattattatcatagtttcacgataaattaacaaaatatttcaaatcaatcttttgattcaaaaccctcatctaaggttacaac 26156907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1603 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold1603
Description:

Target: scaffold1603; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 83 - 222
Target Start/End: Complemental strand, 1466 - 1326
Alignment:
Q  83 aattacacctagtctctacaattattctcatagtctcacgacaaattatcaaaatagttctgatcaatcca-tgattcaaaactctcttctcaagttaca 181  Q
    |||| |||||||||||||||||||| ||| || | ||| || |||||| |||||||||| ||||||||| | ||  |||||||  |||||| ||| ||||    
T  1466 aattgcacctagtctctacaattatcctc-taatttcatgataaattaacaaaatagttatgatcaatctattggctcaaaaccttcttctaaagctaca 1368  T
Q  182 acaccctaatttctta-acgagtctgtgaccgttgaaggttt 222  Q
    |||| ||||| ||||| |  |||| || ||||||||||||||    
T  1367 acactctaatctcttagataagtccgtaaccgttgaaggttt 1326  T

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Target: chr6 (Bit Score: 30; Significance: 0.0000002; HSPs: 2)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 99 - 191
Target Start/End: Complemental strand, 26391039 - 26390946
Alignment:
Q  99 tacaattattctcatagtctcacgacaaattatcaaaatagttctgatcaatc-catgattcaaaactctcttctcaagttacaacaccctaat 191  Q
    ||||||||||||| |||| | || |  ||||| |||||||||| ||||||||| | ||||||||||| || ||||| | ||||||| |||||||    
T  26391039 tacaattattctcctagtttaacaatgaattaacaaaatagttttgatcaatctcttgattcaaaaccctattctctaattacaaccccctaat 26390946  T

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Target: chr6; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 267
Target Start/End: Original strand, 34390560 - 34390613
Alignment:
Q  214 tgaaggttttattaacgttaatttctatatcatgacctagcagtcatctatcct 267  Q
    |||||||||||| |||||||| |||||| |||| ||||| || |||||||||||    
T  34390560 tgaaggttttatgaacgttaacttctatgtcataacctaacaatcatctatcct 34390613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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