View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16020_low_62 (Length: 337)

Name: NF16020_low_62
Description: NF16020
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16020_low_62
NF16020_low_62
[»] chr4 (42 HSPs)
chr4 (267-320)||(53828588-53828641)
chr4 (268-320)||(53814994-53815046)
chr4 (268-320)||(20821940-20821992)
chr4 (268-320)||(21498321-21498373)
chr4 (268-320)||(21498762-21498814)
chr4 (268-320)||(53828354-53828406)
chr4 (268-320)||(5846346-5846398)
chr4 (268-320)||(25052819-25052871)
chr4 (268-316)||(35819197-35819245)
chr4 (268-317)||(11103964-11104013)
chr4 (268-320)||(980115-980167)
chr4 (268-320)||(1518131-1518183)
chr4 (268-320)||(5846113-5846165)
chr4 (268-320)||(9685365-9685417)
chr4 (268-320)||(40717506-40717558)
chr4 (268-320)||(54055097-54055149)
chr4 (267-317)||(14783255-14783305)
chr4 (268-320)||(9685599-9685651)
chr4 (268-320)||(12869094-12869146)
chr4 (268-320)||(54054870-54054922)
chr4 (288-320)||(16066052-16066084)
chr4 (268-320)||(27634146-27634198)
chr4 (268-320)||(31254472-31254524)
chr4 (268-320)||(39902628-39902680)
chr4 (264-320)||(50543632-50543688)
chr4 (284-320)||(53814739-53814775)
chr4 (279-320)||(7806646-7806687)
chr4 (267-320)||(9279193-9279246)
chr4 (267-320)||(21684964-21685017)
chr4 (267-320)||(27634581-27634634)
chr4 (280-320)||(2261818-2261858)
chr4 (268-320)||(2516168-2516220)
chr4 (268-320)||(11036811-11036863)
chr4 (268-320)||(17111735-17111787)
chr4 (268-320)||(22231138-22231190)
chr4 (272-320)||(22827509-22827557)
chr4 (264-320)||(22863437-22863493)
chr4 (268-320)||(28245591-28245643)
chr4 (268-320)||(35788626-35788678)
chr4 (268-320)||(35788861-35788913)
chr4 (268-320)||(35796807-35796859)
chr4 (272-320)||(44118924-44118972)
[»] chr6 (23 HSPs)
chr6 (268-320)||(19712919-19712971)
chr6 (266-320)||(27653182-27653236)
chr6 (268-320)||(27656425-27656477)
chr6 (268-320)||(27772913-27772965)
chr6 (266-320)||(27772679-27772733)
chr6 (268-320)||(21690689-21690741)
chr6 (268-320)||(8026356-8026408)
chr6 (268-320)||(15600903-15600955)
chr6 (270-320)||(13740885-13740935)
chr6 (270-320)||(13746385-13746435)
chr6 (268-320)||(5572680-5572732)
chr6 (268-320)||(28868022-28868074)
chr6 (280-319)||(5572450-5572489)
chr6 (266-320)||(6543008-6543062)
chr6 (267-320)||(13353167-13353220)
chr6 (268-320)||(2736232-2736284)
chr6 (268-320)||(2736467-2736519)
chr6 (268-320)||(2737235-2737287)
chr6 (268-320)||(4868642-4868694)
chr6 (268-320)||(7915817-7915869)
chr6 (268-320)||(12330355-12330407)
chr6 (268-320)||(33494506-33494558)
chr6 (268-320)||(33796293-33796345)
[»] chr3 (28 HSPs)
chr3 (268-320)||(17638202-17638254)
chr3 (268-320)||(6487398-6487450)
chr3 (268-320)||(20327914-20327966)
chr3 (268-320)||(11589752-11589804)
chr3 (268-320)||(23691257-23691309)
chr3 (268-320)||(23708057-23708109)
chr3 (268-320)||(23726513-23726565)
chr3 (268-320)||(23744969-23745021)
chr3 (268-320)||(24063494-24063546)
chr3 (268-320)||(1723141-1723192)
chr3 (268-320)||(8018935-8018987)
chr3 (268-320)||(9273162-9273214)
chr3 (268-320)||(17638375-17638427)
chr3 (268-320)||(28087284-28087336)
chr3 (268-320)||(9272928-9272980)
chr3 (268-320)||(23708289-23708341)
chr3 (268-320)||(23726745-23726797)
chr3 (268-320)||(23745201-23745253)
chr3 (268-320)||(27670457-27670509)
chr3 (264-321)||(38791514-38791571)
chr3 (268-320)||(35038259-35038311)
chr3 (268-320)||(35038493-35038545)
chr3 (268-310)||(11589985-11590027)
chr3 (279-320)||(23691489-23691530)
chr3 (279-320)||(24063726-24063767)
chr3 (268-320)||(16239558-16239610)
chr3 (268-320)||(16927014-16927066)
chr3 (268-320)||(34992517-34992569)
[»] chr8 (33 HSPs)
chr8 (266-320)||(19256885-19256939)
chr8 (267-320)||(17469784-17469837)
chr8 (268-320)||(17477032-17477084)
chr8 (268-320)||(19256651-19256703)
chr8 (268-319)||(39743496-39743547)
chr8 (267-320)||(42846671-42846724)
chr8 (268-320)||(19472315-19472367)
chr8 (268-320)||(19543240-19543292)
chr8 (268-320)||(19589404-19589456)
chr8 (268-320)||(20702763-20702815)
chr8 (268-320)||(24075371-24075423)
chr8 (268-320)||(34842645-34842697)
chr8 (267-320)||(7267530-7267583)
chr8 (268-321)||(16050228-16050281)
chr8 (272-320)||(4828264-4828312)
chr8 (268-320)||(12547066-12547118)
chr8 (268-320)||(34843084-34843136)
chr8 (264-320)||(4828030-4828087)
chr8 (280-321)||(16050008-16050049)
chr8 (268-321)||(34653118-34653171)
chr8 (268-320)||(24532486-24532538)
chr8 (268-320)||(39960158-39960210)
chr8 (264-320)||(39984777-39984833)
chr8 (268-320)||(35682846-35682898)
chr8 (268-320)||(39052994-39053046)
chr8 (273-320)||(26800577-26800624)
chr8 (266-320)||(25325611-25325665)
chr8 (280-317)||(12317265-12317302)
chr8 (268-320)||(10449967-10450019)
chr8 (268-320)||(11232259-11232311)
chr8 (268-320)||(15042735-15042787)
chr8 (268-320)||(39052602-39052654)
chr8 (268-320)||(39984883-39984935)
[»] chr7 (28 HSPs)
chr7 (267-320)||(36206128-36206181)
chr7 (268-320)||(2544280-2544332)
chr7 (268-320)||(2544512-2544564)
chr7 (268-320)||(4267821-4267873)
chr7 (268-320)||(4268021-4268073)
chr7 (268-320)||(6634822-6634874)
chr7 (268-320)||(17202146-17202198)
chr7 (268-320)||(26562138-26562190)
chr7 (268-320)||(34027360-34027412)
chr7 (268-320)||(40746465-40746517)
chr7 (268-320)||(34027594-34027646)
chr7 (279-321)||(40746243-40746285)
chr7 (268-320)||(2404239-2404291)
chr7 (270-320)||(31257096-31257146)
chr7 (268-320)||(3519790-3519842)
chr7 (268-320)||(21861496-21861548)
chr7 (269-309)||(26029037-26029077)
chr7 (280-320)||(31257332-31257372)
chr7 (268-320)||(43688224-43688276)
chr7 (266-321)||(21861259-21861314)
chr7 (267-320)||(29469571-29469624)
chr7 (268-320)||(3392949-3393001)
chr7 (268-320)||(6001500-6001552)
chr7 (272-320)||(10882070-10882118)
chr7 (268-300)||(17202350-17202382)
chr7 (268-320)||(18826553-18826605)
chr7 (268-320)||(21055018-21055070)
chr7 (268-320)||(29469807-29469859)
[»] chr5 (28 HSPs)
chr5 (268-320)||(8098285-8098337)
chr5 (268-320)||(21209986-21210038)
chr5 (268-318)||(8098518-8098568)
chr5 (268-321)||(27133057-27133110)
chr5 (268-320)||(13296859-13296911)
chr5 (268-320)||(19522288-19522340)
chr5 (268-320)||(29909552-29909604)
chr5 (268-320)||(42295546-42295598)
chr5 (268-308)||(21209764-21209804)
chr5 (268-317)||(4481631-4481680)
chr5 (259-320)||(24487710-24487771)
chr5 (268-321)||(38731667-38731720)
chr5 (268-320)||(6637570-6637621)
chr5 (268-320)||(6637804-6637856)
chr5 (268-320)||(8081179-8081231)
chr5 (268-320)||(24269935-24269987)
chr5 (268-320)||(24346566-24346618)
chr5 (270-320)||(8287771-8287821)
chr5 (270-320)||(9368799-9368849)
chr5 (264-320)||(9368558-9368614)
chr5 (268-320)||(13296640-13296692)
chr5 (268-320)||(17150298-17150350)
chr5 (268-320)||(18333530-18333582)
chr5 (268-320)||(19705870-19705922)
chr5 (268-320)||(20510707-20510759)
chr5 (268-320)||(33337303-33337355)
chr5 (268-320)||(41666822-41666874)
chr5 (268-320)||(41667058-41667110)
[»] chr2 (33 HSPs)
chr2 (268-320)||(27036477-27036529)
chr2 (268-320)||(27897670-27897722)
chr2 (268-320)||(32884074-32884126)
chr2 (268-321)||(29718295-29718348)
chr2 (268-320)||(2324207-2324259)
chr2 (268-320)||(2324441-2324493)
chr2 (268-320)||(13486300-13486352)
chr2 (264-320)||(28407858-28407914)
chr2 (268-321)||(17854993-17855046)
chr2 (267-320)||(37770008-37770061)
chr2 (268-320)||(5509280-5509332)
chr2 (268-320)||(17854757-17854809)
chr2 (268-320)||(19191675-19191727)
chr2 (268-320)||(21591748-21591800)
chr2 (268-320)||(36316116-36316168)
chr2 (270-320)||(5509048-5509098)
chr2 (268-321)||(40718271-40718324)
chr2 (268-321)||(31700812-31700865)
chr2 (268-320)||(8424855-8424907)
chr2 (268-320)||(17719367-17719419)
chr2 (268-320)||(37812333-37812385)
chr2 (268-319)||(33606120-33606171)
chr2 (266-320)||(14466475-14466529)
chr2 (267-320)||(40379509-40379562)
chr2 (268-320)||(94085-94137)
chr2 (268-320)||(2029736-2029788)
chr2 (268-320)||(4662198-4662250)
chr2 (268-320)||(5711504-5711556)
chr2 (268-320)||(5711740-5711792)
chr2 (268-320)||(14466240-14466292)
chr2 (268-320)||(16419469-16419521)
chr2 (268-320)||(37840304-37840356)
chr2 (268-320)||(40379274-40379326)
[»] chr1 (26 HSPs)
chr1 (269-319)||(25137369-25137419)
chr1 (268-321)||(51588959-51589012)
chr1 (268-321)||(51589193-51589246)
chr1 (268-320)||(3169733-3169785)
chr1 (268-320)||(28408107-28408159)
chr1 (268-321)||(3169967-3170021)
chr1 (268-321)||(51590007-51590060)
chr1 (268-320)||(35772231-35772283)
chr1 (268-320)||(52127688-52127740)
chr1 (268-318)||(33156936-33156986)
chr1 (268-320)||(12245027-12245079)
chr1 (264-319)||(13386211-13386266)
chr1 (267-317)||(38080571-38080621)
chr1 (271-320)||(2859457-2859506)
chr1 (267-320)||(20208591-20208644)
chr1 (268-321)||(52961549-52961602)
chr1 (268-316)||(855948-855996)
chr1 (268-320)||(4112836-4112888)
chr1 (268-320)||(11924888-11924940)
chr1 (268-320)||(15986398-15986450)
chr1 (268-320)||(25713360-25713412)
chr1 (265-321)||(26176872-26176928)
chr1 (272-320)||(39348184-39348232)
chr1 (268-320)||(51459895-51459947)
chr1 (268-320)||(51460147-51460199)
chr1 (268-320)||(52650836-52650888)
[»] scaffold0334 (1 HSPs)
scaffold0334 (268-320)||(4494-4546)
[»] scaffold0481 (2 HSPs)
scaffold0481 (268-320)||(3536-3588)
scaffold0481 (268-320)||(3302-3354)
[»] scaffold0005 (1 HSPs)
scaffold0005 (267-317)||(56425-56475)
[»] scaffold1034 (1 HSPs)
scaffold1034 (267-320)||(3202-3255)
[»] scaffold0001 (1 HSPs)
scaffold0001 (269-320)||(429841-429892)
[»] scaffold0092 (1 HSPs)
scaffold0092 (268-321)||(5857-5910)
[»] scaffold0519 (1 HSPs)
scaffold0519 (268-320)||(2118-2170)


Alignment Details
Target: chr4 (Bit Score: 54; Significance: 6e-22; HSPs: 42)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 267 - 320
Target Start/End: Complemental strand, 53828641 - 53828588
Alignment:
Q  267 ctgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53828641 ctgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 53828588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 268 - 320
Target Start/End: Complemental strand, 53815046 - 53814994
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53815046 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 53814994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 268 - 320
Target Start/End: Original strand, 20821940 - 20821992
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  20821940 tgttaagagtcccacatcggttaggagttggcctgacaatttgtttataagtg 20821992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 268 - 320
Target Start/End: Original strand, 21498321 - 21498373
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  21498321 tgttaagagtcccacatcggttaggagttggcctgacaatttgtttataagtg 21498373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 268 - 320
Target Start/End: Original strand, 21498762 - 21498814
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  21498762 tgttaagagtcccacatcggttaggagttggcctgacaatttgtttataagtg 21498814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 268 - 320
Target Start/End: Complemental strand, 53828406 - 53828354
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  53828406 tgttaagagtcccacatcggttaggagttggcctgacaatttgtttataagtg 53828354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 268 - 320
Target Start/End: Original strand, 5846346 - 5846398
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||||| ||||||||||||||||||||| ||||||||||||||||||||    
T  5846346 tgttaagagtcccacatcggttaggagttggcatgacaatttgtttataagtg 5846398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 268 - 320
Target Start/End: Original strand, 25052819 - 25052871
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||||| ||||||||||||||| ||||||||||||||||||||||||||    
T  25052819 tgttaagagtcccacatcggttaggaattggcctgacaatttgtttataagtg 25052871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 268 - 316
Target Start/End: Complemental strand, 35819245 - 35819197
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttata 316  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||    
T  35819245 tgttaagagtcccacatcggttaggagttggcctgacaatttgtttata 35819197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 268 - 317
Target Start/End: Complemental strand, 11104013 - 11103964
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataa 317  Q
    |||||||||| ||||||||||||||||||||||||||||||| |||||||    
T  11104013 tgttaagagtcccacatcggttaggagttggcctgacaatttatttataa 11103964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 268 - 320
Target Start/End: Complemental strand, 980167 - 980115
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||||| ||||||||||||||||||| ||||| ||||||||||||||||    
T  980167 tgttaagagtcccacatcggttaggagttgacctgagaatttgtttataagtg 980115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 268 - 320
Target Start/End: Original strand, 1518131 - 1518183
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    ||||| |||| ||||||||||||||||||| ||||||||||||||||||||||    
T  1518131 tgttatgagtcccacatcggttaggagttgacctgacaatttgtttataagtg 1518183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 268 - 320
Target Start/End: Original strand, 5846113 - 5846165
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    ||||||||||  ||||||||||||||||||| |||||||||||||||||||||    
T  5846113 tgttaagagtctcacatcggttaggagttggtctgacaatttgtttataagtg 5846165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 268 - 320
Target Start/End: Original strand, 9685365 - 9685417
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||||| | ||||||||||||||||||||| ||||||||||||||||||    
T  9685365 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtg 9685417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 268 - 320
Target Start/End: Complemental strand, 40717558 - 40717506
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||||||||||||| ||| ||||||||||||| ||||||||||||||||    
T  40717558 tgttaagagttccacatcagttgggagttggcctgataatttgtttataagtg 40717506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 268 - 320
Target Start/End: Complemental strand, 54055149 - 54055097
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||||| ||||||||||||| ||||||||| ||||||||||||||||||    
T  54055149 tgttaagagtcccacatcggttagaagttggcctaacaatttgtttataagtg 54055097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 267 - 317
Target Start/End: Complemental strand, 14783305 - 14783255
Alignment:
Q  267 ctgttaagagttccacatcggttaggagttggcctgacaatttgtttataa 317  Q
    ||||||||||| |||||||||||||||||||  ||||||||||||||||||    
T  14783305 ctgttaagagtcccacatcggttaggagttgatctgacaatttgtttataa 14783255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 268 - 320
Target Start/End: Original strand, 9685599 - 9685651
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||||| || ||||||||||||||||| || ||||||||||||||||||    
T  9685599 tgttaagagtcccgcatcggttaggagttggtctaacaatttgtttataagtg 9685651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 268 - 320
Target Start/End: Complemental strand, 12869146 - 12869094
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||||| | ||||| ||||| ||||||||||||||||||||||||||||    
T  12869146 tgttaagagtcctacatcagttagcagttggcctgacaatttgtttataagtg 12869094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 268 - 320
Target Start/End: Complemental strand, 54054922 - 54054870
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||||| |||||||| |||||||||| ||| ||||||||||||||||||    
T  54054922 tgttaagagtcccacatcgattaggagttgacctaacaatttgtttataagtg 54054870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 288 - 320
Target Start/End: Original strand, 16066052 - 16066084
Alignment:
Q  288 ttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||||||||||||||||||||||||||||    
T  16066052 ttaggagttggcctgacaatttgtttataagtg 16066084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 268 - 320
Target Start/End: Complemental strand, 27634198 - 27634146
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||||| ||||||||| |||||  |||||||||||| ||||||||||||    
T  27634198 tgttaagagtcccacatcggataggacatggcctgacaatgtgtttataagtg 27634146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 268 - 320
Target Start/End: Complemental strand, 31254524 - 31254472
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||||| ||||||||| |||| | |||||||||||| ||||||||||||    
T  31254524 tgttaagagtcccacatcggataggtgatggcctgacaatgtgtttataagtg 31254472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 268 - 320
Target Start/End: Complemental strand, 39902680 - 39902628
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||||| ||||||||| |||||  |||||||||||| ||||||||||||    
T  39902680 tgttaagagtcccacatcggataggacatggcctgacaatgtgtttataagtg 39902628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 264 - 320
Target Start/End: Complemental strand, 50543688 - 50543632
Alignment:
Q  264 aaactgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||||||||| ||||||||| |||| | |||||||||||| ||| ||||||||    
T  50543688 aaactgttaagagtcccacatcggataggtgatggcctgacaatgtgtgtataagtg 50543632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 284 - 320
Target Start/End: Complemental strand, 53814775 - 53814739
Alignment:
Q  284 tcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||| ||||||||||||||||||||||||||||||||    
T  53814775 tcggctaggagttggcctgacaatttgtttataagtg 53814739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 320
Target Start/End: Complemental strand, 7806687 - 7806646
Alignment:
Q  279 ccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    ||||||||||||||||||||||||||||| | ||| ||||||    
T  7806687 ccacatcggttaggagttggcctgacaatgtatttttaagtg 7806646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 267 - 320
Target Start/End: Original strand, 9279193 - 9279246
Alignment:
Q  267 ctgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||||||  |||||||| |||| | |||||||||||| ||||||||||||    
T  9279193 ctgttaagagtcgcacatcggataggtgatggcctgacaatgtgtttataagtg 9279246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 267 - 320
Target Start/End: Original strand, 21684964 - 21685017
Alignment:
Q  267 ctgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||||||  |||||||| |||||  |||||||||||| ||||||||||||    
T  21684964 ctgttaagagtctcacatcggataggacatggcctgacaatgtgtttataagtg 21685017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 267 - 320
Target Start/End: Complemental strand, 27634634 - 27634581
Alignment:
Q  267 ctgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    ||||||||||| ||||||||| |||||  |||||||||||| ||||||| ||||    
T  27634634 ctgttaagagtcccacatcggataggacatggcctgacaatgtgtttatgagtg 27634581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 320
Target Start/End: Complemental strand, 2261858 - 2261818
Alignment:
Q  280 cacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    ||||| ||||||||| |||||||||||||| ||||||||||    
T  2261858 cacattggttaggaggtggcctgacaatttatttataagtg 2261818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 268 - 320
Target Start/End: Original strand, 2516168 - 2516220
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||||| |||| |||||||| || || ||||||||| ||||||||||||    
T  2516168 tgttaagagtcccacttcggttagaagatgacctgacaatatgtttataagtg 2516220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 268 - 320
Target Start/End: Complemental strand, 11036863 - 11036811
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||||| | ||||||| |||| | |||||||||||| ||||||||||||    
T  11036863 tgttaagagtacaacatcggataggtgatggcctgacaatgtgtttataagtg 11036811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 268 - 320
Target Start/End: Original strand, 17111735 - 17111787
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||||| ||||||| | |||| | |||||||||||| ||||||||||||    
T  17111735 tgttaagagtcccacatcagataggtgatggcctgacaatgtgtttataagtg 17111787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 268 - 320
Target Start/End: Complemental strand, 22231190 - 22231138
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||||| | ||||||| |||||  |||||||||||| ||||||||||||    
T  22231190 tgttaagagtcctacatcggataggatatggcctgacaatgtgtttataagtg 22231138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 272 - 320
Target Start/End: Original strand, 22827509 - 22827557
Alignment:
Q  272 aagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||| ||||||||| |||||| |||||||||||  ||||||||||||    
T  22827509 aagagtcccacatcggataggagatggcctgacaacgtgtttataagtg 22827557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 264 - 320
Target Start/End: Original strand, 22863437 - 22863493
Alignment:
Q  264 aaactgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    ||||||||||||||  ||||||||  || || |||||||||||| ||||||||||||    
T  22863437 aaactgttaagagtctcacatcggacagaagatggcctgacaatgtgtttataagtg 22863493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 268 - 320
Target Start/End: Complemental strand, 28245643 - 28245591
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    ||||||||||  |||||||| |||| | |||||||||||| ||||||||||||    
T  28245643 tgttaagagtctcacatcggataggtgatggcctgacaatgtgtttataagtg 28245591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 268 - 320
Target Start/End: Original strand, 35788626 - 35788678
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||||| ||||||| | |||||  |||||||||||| ||||||||||||    
T  35788626 tgttaagagtcccacatcagataggacatggcctgacaatgtgtttataagtg 35788678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 268 - 320
Target Start/End: Original strand, 35788861 - 35788913
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||||| ||||||||| ||| |  |||||||||||| ||||||||||||    
T  35788861 tgttaagagtcccacatcggatagaacatggcctgacaatgtgtttataagtg 35788913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 268 - 320
Target Start/End: Complemental strand, 35796859 - 35796807
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    ||||||||||||||||||||  ||||  |||| ||||||| ||||||||||||    
T  35796859 tgttaagagttccacatcggacaggacatggcatgacaatgtgtttataagtg 35796807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 272 - 320
Target Start/End: Complemental strand, 44118972 - 44118924
Alignment:
Q  272 aagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||| ||||||||| || ||| |||||||||||| ||||||||||||    
T  44118972 aagagtcccacatcggataagagatggcctgacaatgtgtttataagtg 44118924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 53; Significance: 2e-21; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 268 - 320
Target Start/End: Original strand, 19712919 - 19712971
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19712919 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 19712971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 266 - 320
Target Start/End: Original strand, 27653182 - 27653236
Alignment:
Q  266 actgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  27653182 actgttaagagtcccacatcggttaggagttggcctgacaatttgtttataagtg 27653236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 268 - 320
Target Start/End: Original strand, 27656425 - 27656477
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  27656425 tgttaagagtcccacatcggttaggagttggcctgacaatttgtttataagtg 27656477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 268 - 320
Target Start/End: Original strand, 27772913 - 27772965
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  27772913 tgttaagagtcccacatcggttaggagttggcctgacaatttgtttataagtg 27772965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 266 - 320
Target Start/End: Original strand, 27772679 - 27772733
Alignment:
Q  266 actgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||||| | ||||||||||||||||||||||||||||||||||||||||||    
T  27772679 actgttaagattcccacatcggttaggagttggcctgacaatttgtttataagtg 27772733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 268 - 320
Target Start/End: Original strand, 21690689 - 21690741
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||||| ||||||||||||||| ||||||||||||||||||||||||||    
T  21690689 tgttaagagtcccacatcggttaggatttggcctgacaatttgtttataagtg 21690741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 268 - 320
Target Start/End: Original strand, 8026356 - 8026408
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||||| |||| ||||||| |||||||||||||||||||||||||||||    
T  8026356 tgttaagagtcccacgtcggttatgagttggcctgacaatttgtttataagtg 8026408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 268 - 320
Target Start/End: Original strand, 15600903 - 15600955
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||||| |||||||||||||||||||| |||| ||||||||||||||||    
T  15600903 tgttaagagtcccacatcggttaggagttggtctgataatttgtttataagtg 15600955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 270 - 320
Target Start/End: Original strand, 13740885 - 13740935
Alignment:
Q  270 ttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||||||||||||| || | |||||||||||||||||||||||||||    
T  13740885 ttaagagttccacatcggatatgtgttggcctgacaatttgtttataagtg 13740935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 270 - 320
Target Start/End: Original strand, 13746385 - 13746435
Alignment:
Q  270 ttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||||||||||||| || | |||||||||||||||||||||||||||    
T  13746385 ttaagagttccacatcggatatgtgttggcctgacaatttgtttataagtg 13746435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 268 - 320
Target Start/End: Complemental strand, 5572732 - 5572680
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||| | |||||||| |||||||||||| ||||||||||||||||||||    
T  5572732 tgttaagaatcccacatcgtttaggagttggcatgacaatttgtttataagtg 5572680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 268 - 320
Target Start/End: Complemental strand, 28868074 - 28868022
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||||| |||||||||||| |||||| ||||||||||| ||||||||||    
T  28868074 tgttaagagtcccacatcggttacgagttgacctgacaatttatttataagtg 28868022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 280 - 319
Target Start/End: Complemental strand, 5572489 - 5572450
Alignment:
Q  280 cacatcggttaggagttggcctgacaatttgtttataagt 319  Q
    ||||||||||||||||| ||||||||||||||||||||||    
T  5572489 cacatcggttaggagtttgcctgacaatttgtttataagt 5572450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 266 - 320
Target Start/End: Complemental strand, 6543062 - 6543008
Alignment:
Q  266 actgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||||||||||||||||| || ||| ||| |||||||| ||||||||||||    
T  6543062 actgttaagagttccacatcggataagagatggtctgacaatgtgtttataagtg 6543008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 267 - 320
Target Start/End: Original strand, 13353167 - 13353220
Alignment:
Q  267 ctgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    ||||||||||| |||||||||  ||||  |||||||||||| ||||||||||||    
T  13353167 ctgttaagagtcccacatcggacaggacatggcctgacaatgtgtttataagtg 13353220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 268 - 320
Target Start/End: Complemental strand, 2736284 - 2736232
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||| ||||| ||||||||| |||||| || ||||||||| ||||||||||||    
T  2736284 tgttgagagtcccacatcgggtaggagatgacctgacaatgtgtttataagtg 2736232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 268 - 320
Target Start/End: Complemental strand, 2736519 - 2736467
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||||||||||||||| || ||| || ||||| ||| ||||||||||||    
T  2736519 tgttaagagttccacatcggatatgagatgacctgataatgtgtttataagtg 2736467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 268 - 320
Target Start/End: Complemental strand, 2737287 - 2737235
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||||||||||||||| || ||| || ||||| ||| ||||||||||||    
T  2737287 tgttaagagttccacatcggatatgagatgacctgataatgtgtttataagtg 2737235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 268 - 320
Target Start/End: Complemental strand, 4868694 - 4868642
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||||| |||||||||  ||||  |||||||||||| ||||||||||||    
T  4868694 tgttaagagtcccacatcggacaggacatggcctgacaatgtgtttataagtg 4868642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 268 - 320
Target Start/End: Original strand, 7915817 - 7915869
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||||| | |||| || ||| ||||||||||||||| ||||||||||||    
T  7915817 tgttaagagtccaacattggatagaagttggcctgacaatgtgtttataagtg 7915869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 268 - 320
Target Start/End: Complemental strand, 12330407 - 12330355
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||||| ||||||||| |||||  ||| |||||||| ||||||||||||    
T  12330407 tgttaagagtcccacatcggataggacatggtctgacaatgtgtttataagtg 12330355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 268 - 320
Target Start/End: Original strand, 33494506 - 33494558
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||||| ||||||||| |||||| |||| ||| ||| ||||||||||||    
T  33494506 tgttaagagtcccacatcggataggagatggcttgaaaatatgtttataagtg 33494558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 268 - 320
Target Start/End: Original strand, 33796293 - 33796345
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||||| |||||||||  ||||  |||||||||||| ||||||||||||    
T  33796293 tgttaagagtcccacatcggacaggacatggcctgacaatgtgtttataagtg 33796345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 53; Significance: 2e-21; HSPs: 28)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 268 - 320
Target Start/End: Original strand, 17638202 - 17638254
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17638202 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 17638254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 268 - 320
Target Start/End: Complemental strand, 6487450 - 6487398
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  6487450 tgttaagagtcccacatcggttaggagttggcctgacaatttgtttataagtg 6487398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 268 - 320
Target Start/End: Complemental strand, 20327966 - 20327914
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  20327966 tgttaagagtcccacatcggttaggagttggcctgacaatttgtttataagtg 20327914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 268 - 320
Target Start/End: Original strand, 11589752 - 11589804
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    ||||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  11589752 tgttaagagtctcacatcggttaggagttggcctgacaatttgtttataagtg 11589804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 268 - 320
Target Start/End: Complemental strand, 23691309 - 23691257
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  23691309 tgttaagagtcccacatcggttaggagttagcctgacaatttgtttataagtg 23691257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 268 - 320
Target Start/End: Complemental strand, 23708109 - 23708057
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  23708109 tgttaagagtcccacatcggttaggagttagcctgacaatttgtttataagtg 23708057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 268 - 320
Target Start/End: Complemental strand, 23726565 - 23726513
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  23726565 tgttaagagtcccacatcggttaggagttagcctgacaatttgtttataagtg 23726513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 268 - 320
Target Start/End: Complemental strand, 23745021 - 23744969
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  23745021 tgttaagagtcccacatcggttaggagttagcctgacaatttgtttataagtg 23744969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 268 - 320
Target Start/End: Complemental strand, 24063546 - 24063494
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  24063546 tgttaagagtcccacatcggttaggagttagcctgacaatttgtttataagtg 24063494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 268 - 320
Target Start/End: Complemental strand, 1723192 - 1723141
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  1723192 tgttaagagtcccacatcggttag-agttggcctgacaatttgtttataagtg 1723141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 268 - 320
Target Start/End: Original strand, 8018935 - 8018987
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||||| ||||||||||||| ||||||||||| ||||||||||||||||    
T  8018935 tgttaagagtcccacatcggttagaagttggcctgaaaatttgtttataagtg 8018987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 268 - 320
Target Start/End: Original strand, 9273162 - 9273214
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||||| ||||||||||||||| |||| |||||||||||||||||||||    
T  9273162 tgttaagagtcccacatcggttaggaattggtctgacaatttgtttataagtg 9273214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 268 - 320
Target Start/End: Original strand, 17638375 - 17638427
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||||| ||||||||||||| || |||||||||||||||||||||||||    
T  17638375 tgttaagagtcccacatcggttagaagctggcctgacaatttgtttataagtg 17638427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 268 - 320
Target Start/End: Complemental strand, 28087336 - 28087284
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    ||||||||||  |||||||||||||||||||||| ||||||||||||||||||    
T  28087336 tgttaagagtctcacatcggttaggagttggcctaacaatttgtttataagtg 28087284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 268 - 320
Target Start/End: Original strand, 9272928 - 9272980
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    ||||||||||  |||||||||||||| ||||||||| ||||||||||||||||    
T  9272928 tgttaagagtctcacatcggttaggaattggcctgataatttgtttataagtg 9272980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 268 - 320
Target Start/End: Complemental strand, 23708341 - 23708289
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||||| ||||||| |||||||||| | |||||||||||||||||||||    
T  23708341 tgttaagagtcccacatcagttaggagttagtctgacaatttgtttataagtg 23708289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 268 - 320
Target Start/End: Complemental strand, 23726797 - 23726745
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||||| ||||||| |||||||||| | |||||||||||||||||||||    
T  23726797 tgttaagagtcccacatcagttaggagttagtctgacaatttgtttataagtg 23726745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 268 - 320
Target Start/End: Complemental strand, 23745253 - 23745201
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||||| ||||||| |||||||||| | |||||||||||||||||||||    
T  23745253 tgttaagagtcccacatcagttaggagttagtctgacaatttgtttataagtg 23745201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 268 - 320
Target Start/End: Complemental strand, 27670509 - 27670457
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||||| |||||||||| |||| |||||||||||| |||||||||||||    
T  27670509 tgttaagagtcccacatcggtcaggaattggcctgacaaattgtttataagtg 27670457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 264 - 321
Target Start/End: Complemental strand, 38791571 - 38791514
Alignment:
Q  264 aaactgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtga 321  Q
    |||||||||||||| ||||||||| |||||| ||| |||||||| | |||||||||||    
T  38791571 aaactgttaagagtcccacatcggataggagatggtctgacaatgtatttataagtga 38791514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 268 - 320
Target Start/End: Complemental strand, 35038311 - 35038259
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||||| ||||||||| |||| | |||||||||||| ||||||||||||    
T  35038311 tgttaagagtcccacatcggataggtgatggcctgacaatgtgtttataagtg 35038259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 268 - 320
Target Start/End: Complemental strand, 35038545 - 35038493
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||||| ||||||||| |||| | |||||||||||| ||||||||||||    
T  35038545 tgttaagagtcccacatcggataggtgatggcctgacaatgtgtttataagtg 35038493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 268 - 310
Target Start/End: Original strand, 11589985 - 11590027
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttg 310  Q
    |||||||||| |||||||||||||||| ||| |||||||||||    
T  11589985 tgttaagagtcccacatcggttaggagctggtctgacaatttg 11590027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 320
Target Start/End: Complemental strand, 23691530 - 23691489
Alignment:
Q  279 ccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    ||||||| |||||||||| | |||||||||||||||||||||    
T  23691530 ccacatcagttaggagttagtctgacaatttgtttataagtg 23691489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 320
Target Start/End: Complemental strand, 24063767 - 24063726
Alignment:
Q  279 ccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    ||||||| |||||||||| | |||||||||||||||||||||    
T  24063767 ccacatcagttaggagttagtctgacaatttgtttataagtg 24063726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 268 - 320
Target Start/End: Original strand, 16239558 - 16239610
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    ||||||||||  |||||||| |||||  |||||||||||| ||||||||||||    
T  16239558 tgttaagagtctcacatcggataggacatggcctgacaatgtgtttataagtg 16239610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 268 - 320
Target Start/End: Complemental strand, 16927066 - 16927014
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||||| ||||||||| ||| |  |||||||||||| ||||||||||||    
T  16927066 tgttaagagtcccacatcggatagaacatggcctgacaatgtgtttataagtg 16927014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 268 - 320
Target Start/End: Original strand, 34992517 - 34992569
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||||| ||||||||| |||| | ||| |||||||| ||||||||||||    
T  34992517 tgttaagagtcccacatcggataggtgatggtctgacaatgtgtttataagtg 34992569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 51; Significance: 3e-20; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 266 - 320
Target Start/End: Complemental strand, 19256939 - 19256885
Alignment:
Q  266 actgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  19256939 actgttaagagtcccacatcggttaggagttggcctgacaatttgtttataagtg 19256885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 267 - 320
Target Start/End: Original strand, 17469784 - 17469837
Alignment:
Q  267 ctgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  17469784 ctgttaagagtcccacatcggttaggagttggcctgacaatttgtttataagtg 17469837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 268 - 320
Target Start/End: Original strand, 17477032 - 17477084
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  17477032 tgttaagagtcccacatcggttaggagttggcctgacaatttgtttataagtg 17477084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 268 - 320
Target Start/End: Complemental strand, 19256703 - 19256651
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  19256703 tgttaagagtcccacatcggttaggagttggcctgacaatttgtttataagtg 19256651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 268 - 319
Target Start/End: Original strand, 39743496 - 39743547
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagt 319  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  39743496 tgttaagagtcccacatcggttaggagttggcctgacaatttgtttataagt 39743547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 267 - 320
Target Start/End: Complemental strand, 42846724 - 42846671
Alignment:
Q  267 ctgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  42846724 ctgttaagagtctcacatcggttaggagttggcctgacaatttgtttataagtg 42846671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 268 - 320
Target Start/End: Complemental strand, 19472367 - 19472315
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||||| ||||||||||||||| ||||||||||||||||||||||||||    
T  19472367 tgttaagagtcccacatcggttaggaattggcctgacaatttgtttataagtg 19472315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 268 - 320
Target Start/End: Complemental strand, 19543292 - 19543240
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||||| ||||||||||||||| ||||||||||||||||||||||||||    
T  19543292 tgttaagagtcccacatcggttaggaattggcctgacaatttgtttataagtg 19543240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 268 - 320
Target Start/End: Original strand, 19589404 - 19589456
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||||| ||||||||||||||| ||||||||||||||||||||||||||    
T  19589404 tgttaagagtcccacatcggttaggaattggcctgacaatttgtttataagtg 19589456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 268 - 320
Target Start/End: Original strand, 20702763 - 20702815
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||||| ||||||||||||||||||||||||||| ||||||||||||||    
T  20702763 tgttaagagtcccacatcggttaggagttggcctgacagtttgtttataagtg 20702815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 268 - 320
Target Start/End: Complemental strand, 24075423 - 24075371
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||||| ||||||||||||||||||||||||||| ||||||||||||||    
T  24075423 tgttaagagtcccacatcggttaggagttggcctgacactttgtttataagtg 24075371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 268 - 320
Target Start/End: Original strand, 34842645 - 34842697
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||||| ||||||| ||||||||||||||||||||||||||||||||||    
T  34842645 tgttaagagtcccacatcagttaggagttggcctgacaatttgtttataagtg 34842697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 267 - 320
Target Start/End: Complemental strand, 7267583 - 7267530
Alignment:
Q  267 ctgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||||||  |||||||||||||||||||| ||||||||||||||||||||    
T  7267583 ctgttaagagtcacacatcggttaggagttggcttgacaatttgtttataagtg 7267530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 268 - 321
Target Start/End: Original strand, 16050228 - 16050281
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtga 321  Q
    ||||||||||  |||||||||||||||||||||||||||||| |||||||||||    
T  16050228 tgttaagagtctcacatcggttaggagttggcctgacaatttatttataagtga 16050281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 272 - 320
Target Start/End: Original strand, 4828264 - 4828312
Alignment:
Q  272 aagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||||||    
T  4828264 aagagtcccacatcggttaggagttggcatgacaatttgtttataagtg 4828312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 268 - 320
Target Start/End: Original strand, 12547066 - 12547118
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||||| |||||||||||||||||||| |||||||||| ||||||||||    
T  12547066 tgttaagagtcccacatcggttaggagttggtctgacaatttatttataagtg 12547118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 268 - 320
Target Start/End: Original strand, 34843084 - 34843136
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||||| |||||||||||||||||||| || ||||||||||||||||||    
T  34843084 tgttaagagtcccacatcggttaggagttggtctaacaatttgtttataagtg 34843136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 264 - 320
Target Start/End: Original strand, 4828030 - 4828087
Alignment:
Q  264 aaactgttaa-gagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||||| |||| ||||||||||||||||||| | ||||||||||||||||||||    
T  4828030 aaactgttaaagagtcccacatcggttaggagttgacatgacaatttgtttataagtg 4828087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 280 - 321
Target Start/End: Original strand, 16050008 - 16050049
Alignment:
Q  280 cacatcggttaggagttggcctgacaatttgtttataagtga 321  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  16050008 cacatcggttaggagttggcctgataatttgtttataagtga 16050049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 268 - 321
Target Start/End: Original strand, 34653118 - 34653171
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtga 321  Q
    ||||||||||  ||||||||||||||||||  ||||||||||||||||||||||    
T  34653118 tgttaagagtctcacatcggttaggagttgatctgacaatttgtttataagtga 34653171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 268 - 320
Target Start/End: Complemental strand, 24532538 - 24532486
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||||| ||||||||| |||||| |||||||||||| ||||||||||||    
T  24532538 tgttaagagtcccacatcggataggagatggcctgacaatgtgtttataagtg 24532486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 268 - 320
Target Start/End: Original strand, 39960158 - 39960210
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||||| ||||||||| |||||| |||||||| ||||||||||||||||    
T  39960158 tgttaagagtcccacatcggataggagatggcctgaaaatttgtttataagtg 39960210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 264 - 320
Target Start/End: Original strand, 39984777 - 39984833
Alignment:
Q  264 aaactgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||| |||||||||  ||||||| ||||||||||| |||||||||||||||||||||    
T  39984777 aaaccgttaagagtctcacatcgattaggagttggtctgacaatttgtttataagtg 39984833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 268 - 320
Target Start/End: Complemental strand, 35682898 - 35682846
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    ||||||||||||||||||||  ||||  |||||||||||| ||||||||||||    
T  35682898 tgttaagagttccacatcggacaggacatggcctgacaatgtgtttataagtg 35682846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 268 - 320
Target Start/End: Complemental strand, 39053046 - 39052994
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||||| ||||||||| |||| | |||||||||||| ||||||||||||    
T  39053046 tgttaagagtcccacatcggataggtgatggcctgacaatgtgtttataagtg 39052994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 273 - 320
Target Start/End: Complemental strand, 26800624 - 26800577
Alignment:
Q  273 agagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    ||||| ||||||||||||| ||||||||||| ||||||| ||||||||    
T  26800624 agagtcccacatcggttagaagttggcctgataatttgtctataagtg 26800577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 266 - 320
Target Start/End: Original strand, 25325611 - 25325665
Alignment:
Q  266 actgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||||||| ||||||||| |||||  |||||| ||||| ||||||||||||    
T  25325611 actgttaagagtcccacatcggataggacatggcctaacaatgtgtttataagtg 25325665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 280 - 317
Target Start/End: Original strand, 12317265 - 12317302
Alignment:
Q  280 cacatcggttaggagttggcctgacaatttgtttataa 317  Q
    ||||||||||| |||||||||| |||||||||||||||    
T  12317265 cacatcggttaagagttggcctaacaatttgtttataa 12317302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 268 - 320
Target Start/End: Original strand, 10449967 - 10450019
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    ||||||||||  |||||||| |||||  |||||||||||| ||||||||||||    
T  10449967 tgttaagagtctcacatcggataggacatggcctgacaatgtgtttataagtg 10450019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 268 - 320
Target Start/End: Complemental strand, 11232311 - 11232259
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||||| |||||||||  ||||  |||||||||||| ||||||||||||    
T  11232311 tgttaagagtcccacatcggacaggacatggcctgacaatgtgtttataagtg 11232259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 268 - 320
Target Start/End: Complemental strand, 15042787 - 15042735
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||||| ||||||||| || ||  |||||||||||| ||||||||||||    
T  15042787 tgttaagagtcccacatcggatacgacatggcctgacaatgtgtttataagtg 15042735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 268 - 320
Target Start/End: Complemental strand, 39052654 - 39052602
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||||| ||||||| | |||| | |||||||||||| ||||||||||||    
T  39052654 tgttaagagtcccacatcagataggtgatggcctgacaatgtgtttataagtg 39052602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 268 - 320
Target Start/End: Original strand, 39984883 - 39984935
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    ||||||||||  |||||| ||||||||||| | | ||||||||||||||||||    
T  39984883 tgttaagagtctcacatcagttaggagttgacataacaatttgtttataagtg 39984935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 50; Significance: 1e-19; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 267 - 320
Target Start/End: Complemental strand, 36206181 - 36206128
Alignment:
Q  267 ctgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  36206181 ctgttaagagttccacatcggttaggagttggcctaacaatttgtttataagtg 36206128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 268 - 320
Target Start/End: Complemental strand, 2544332 - 2544280
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||||| |||||||||||||||||||| |||||||||||||||||||||    
T  2544332 tgttaagagtcccacatcggttaggagttggtctgacaatttgtttataagtg 2544280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 268 - 320
Target Start/End: Complemental strand, 2544564 - 2544512
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||||| |||| |||||||||||||||||||||||||||||||||||||    
T  2544564 tgttaagagtcccacgtcggttaggagttggcctgacaatttgtttataagtg 2544512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 268 - 320
Target Start/End: Original strand, 4267821 - 4267873
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||||| |||||||||||||||||||| |||||||||||||||||||||    
T  4267821 tgttaagagtcccacatcggttaggagttggtctgacaatttgtttataagtg 4267873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 268 - 320
Target Start/End: Original strand, 4268021 - 4268073
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||||| ||||||| ||||||||||||||||||||||||||||||||||    
T  4268021 tgttaagagtcccacatcagttaggagttggcctgacaatttgtttataagtg 4268073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 268 - 320
Target Start/End: Original strand, 6634822 - 6634874
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    ||||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  6634822 tgttaagagtctcacatcggttaggagttggcctgacaatttgtttataagtg 6634874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 268 - 320
Target Start/End: Original strand, 17202146 - 17202198
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  17202146 tgttaagagtcccacatcggttaagagttggcctgacaatttgtttataagtg 17202198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 268 - 320
Target Start/End: Complemental strand, 26562190 - 26562138
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    ||||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  26562190 tgttaagagtctcacatcggttaggagttggcctgacaatttgtttataagtg 26562138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 268 - 320
Target Start/End: Original strand, 34027360 - 34027412
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||| | ||||||||||||||||||||||||||||||||||||||||||    
T  34027360 tgttaagaatcccacatcggttaggagttggcctgacaatttgtttataagtg 34027412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 268 - 320
Target Start/End: Original strand, 40746465 - 40746517
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||||| |||||| |||||||||||||||||||||||||||||||||||    
T  40746465 tgttaagagtcccacattggttaggagttggcctgacaatttgtttataagtg 40746517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 268 - 320
Target Start/End: Original strand, 34027594 - 34027646
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||||| ||||||| ||||| ||||||||||||||||||||||||||||    
T  34027594 tgttaagagtcccacatcagttagaagttggcctgacaatttgtttataagtg 34027646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 279 - 321
Target Start/End: Original strand, 40746243 - 40746285
Alignment:
Q  279 ccacatcggttaggagttggcctgacaatttgtttataagtga 321  Q
    |||||| ||||||||||||||||||||||||||||||||||||    
T  40746243 ccacattggttaggagttggcctgacaatttgtttataagtga 40746285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 268 - 320
Target Start/End: Complemental strand, 2404291 - 2404239
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||||| |||||||||||||||| ||| |||||||| ||||||||||||    
T  2404291 tgttaagagtcccacatcggttaggagatggactgacaatgtgtttataagtg 2404239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 270 - 320
Target Start/End: Complemental strand, 31257146 - 31257096
Alignment:
Q  270 ttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    ||||||||  |||||||||||| |||||| |||||||||||||||||||||    
T  31257146 ttaagagtctcacatcggttagaagttggtctgacaatttgtttataagtg 31257096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 268 - 320
Target Start/End: Complemental strand, 3519842 - 3519790
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||||| ||||||||| |||| | |||||||||||| ||||||||||||    
T  3519842 tgttaagagtcccacatcggataggtgatggcctgacaatgtgtttataagtg 3519790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 268 - 320
Target Start/End: Original strand, 21861496 - 21861548
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    ||||||||||||||||||||  ||||  |||||||||||| ||||||||||||    
T  21861496 tgttaagagttccacatcggacaggacatggcctgacaatgtgtttataagtg 21861548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 269 - 309
Target Start/End: Complemental strand, 26029077 - 26029037
Alignment:
Q  269 gttaagagttccacatcggttaggagttggcctgacaattt 309  Q
    ||||||||| | |||||||||||||||||||||||||||||    
T  26029077 gttaagagtcctacatcggttaggagttggcctgacaattt 26029037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 280 - 320
Target Start/End: Complemental strand, 31257372 - 31257332
Alignment:
Q  280 cacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    ||||||||||||||||||| |||||||||| ||||||||||    
T  31257372 cacatcggttaggagttggtctgacaatttatttataagtg 31257332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 268 - 320
Target Start/End: Complemental strand, 43688276 - 43688224
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||||| ||||||||| |||||  |||||||||||| ||||||||||||    
T  43688276 tgttaagagtcccacatcggataggacatggcctgacaatgtgtttataagtg 43688224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 266 - 321
Target Start/End: Original strand, 21861259 - 21861314
Alignment:
Q  266 actgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtga 321  Q
    |||||||||||| |||||||||  ||||  |||||||||||| |||||||||||||    
T  21861259 actgttaagagtcccacatcggacaggacatggcctgacaatgtgtttataagtga 21861314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 267 - 320
Target Start/End: Original strand, 29469571 - 29469624
Alignment:
Q  267 ctgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    ||||||||||| |||||||||  ||||  |||||||||||| ||||||||||||    
T  29469571 ctgttaagagtcccacatcggacaggacatggcctgacaatgtgtttataagtg 29469624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 268 - 320
Target Start/End: Original strand, 3392949 - 3393001
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    ||||||||||  |||||||| |||| | |||||||||||| ||||||||||||    
T  3392949 tgttaagagtctcacatcggataggtgatggcctgacaatgtgtttataagtg 3393001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 268 - 320
Target Start/End: Complemental strand, 6001552 - 6001500
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||||| ||||||||| ||| || || ||||||||| ||||||||||||    
T  6001552 tgttaagagtcccacatcggatagaagatgacctgacaatatgtttataagtg 6001500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 272 - 320
Target Start/End: Complemental strand, 10882118 - 10882070
Alignment:
Q  272 aagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||| |||||| | | |||||||||| ||||||||||||||||||||    
T  10882118 aagagtcccacattgataaggagttggcatgacaatttgtttataagtg 10882070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 268 - 300
Target Start/End: Original strand, 17202350 - 17202382
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcc 300  Q
    |||||||||| ||||||||||||||||||||||    
T  17202350 tgttaagagtcccacatcggttaggagttggcc 17202382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 268 - 320
Target Start/End: Complemental strand, 18826605 - 18826553
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||||| |||||| || |||||| || ||||||||| ||||||||||||    
T  18826605 tgttaagagtcccacattggataggagatgacctgacaatgtgtttataagtg 18826553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 268 - 320
Target Start/End: Complemental strand, 21055070 - 21055018
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||||| ||| ||||| |||| | |||||||||||| ||||||||||||    
T  21055070 tgttaagagtcccatatcggataggtgatggcctgacaatatgtttataagtg 21055018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 268 - 320
Target Start/End: Original strand, 29469807 - 29469859
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||||| |||||||||  ||||  |||||||||||| ||||||||||||    
T  29469807 tgttaagagtcccacatcggacaggacatggcctgacaatgtgtttataagtg 29469859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 49; Significance: 5e-19; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 268 - 320
Target Start/End: Original strand, 8098285 - 8098337
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  8098285 tgttaagagtcccacatcggttaggagttggcctgacaatttgtttataagtg 8098337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 268 - 320
Target Start/End: Complemental strand, 21210038 - 21209986
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  21210038 tgttaagagtcccacatcggttaggagttggcctgacaatttgtttataagtg 21209986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 268 - 318
Target Start/End: Original strand, 8098518 - 8098568
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataag 318  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  8098518 tgttaagagtcccacatcggttaggagttggcctgacaatttgtttataag 8098568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 268 - 321
Target Start/End: Complemental strand, 27133110 - 27133057
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtga 321  Q
    ||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  27133110 tgttaagagtctcacatcggttaggagttggcctgacaatttgtttataagtga 27133057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 268 - 320
Target Start/End: Original strand, 13296859 - 13296911
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||||| || ||||||||||||||||| |||||||||||||||||||||    
T  13296859 tgttaagagtcccgcatcggttaggagttggtctgacaatttgtttataagtg 13296911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 268 - 320
Target Start/End: Original strand, 19522288 - 19522340
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||||| |||||||||||||||||||| |||||||||| ||||||||||    
T  19522288 tgttaagagtcccacatcggttaggagttggactgacaatttatttataagtg 19522340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 268 - 320
Target Start/End: Complemental strand, 29909604 - 29909552
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||||| | ||||||||||||||||||||||||||||| ||||||||||    
T  29909604 tgttaagagtccgacatcggttaggagttggcctgacaatttatttataagtg 29909552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 268 - 320
Target Start/End: Original strand, 42295546 - 42295598
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||||| ||||||| ||||||||||||||||| ||||||||||||||||    
T  42295546 tgttaagagtcccacatcagttaggagttggcctgataatttgtttataagtg 42295598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 268 - 308
Target Start/End: Complemental strand, 21209804 - 21209764
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatt 308  Q
    |||||||||| ||||||||||||||||||||||||||||||    
T  21209804 tgttaagagtcccacatcggttaggagttggcctgacaatt 21209764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 268 - 317
Target Start/End: Complemental strand, 4481680 - 4481631
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataa 317  Q
    |||||||||| ||||||||| ||| ||||||||||||||| |||||||||    
T  4481680 tgttaagagtcccacatcggatagaagttggcctgacaatgtgtttataa 4481631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 259 - 320
Target Start/End: Complemental strand, 24487771 - 24487710
Alignment:
Q  259 tttccaaactgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||| ||| ||||||||||  ||||||||||||||||||| |||| ||| ||||||||||||    
T  24487771 tttcaaaagtgttaagagtctcacatcggttaggagttggtctgaaaatatgtttataagtg 24487710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 268 - 321
Target Start/End: Complemental strand, 38731720 - 38731667
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtga 321  Q
    ||||||| |||||||||||| |||||| || ||||||||||| |||||||||||    
T  38731720 tgttaagtgttccacatcggataggagatgacctgacaatttatttataagtga 38731667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 268 - 320
Target Start/End: Original strand, 6637570 - 6637621
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||||| |||||||||||||||  |||||||||||| ||||||||||||    
T  6637570 tgttaagagt-ccacatcggttaggaaatggcctgacaatgtgtttataagtg 6637621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 268 - 320
Target Start/End: Original strand, 6637804 - 6637856
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||||| |||||||||||||||| || ||||||||| ||| ||||||||    
T  6637804 tgttaagagtcccacatcggttaggagatgacctgacaatgtgtctataagtg 6637856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 268 - 320
Target Start/End: Complemental strand, 8081231 - 8081179
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||||| ||||||||| |||||  |||||||||||| ||||||||||||    
T  8081231 tgttaagagtcccacatcggataggacatggcctgacaatgtgtttataagtg 8081179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 268 - 320
Target Start/End: Complemental strand, 24269987 - 24269935
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||||| ||||||||| |||||  |||||||||||| ||||||||||||    
T  24269987 tgttaagagtcccacatcggataggacatggcctgacaatgtgtttataagtg 24269935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 268 - 320
Target Start/End: Complemental strand, 24346618 - 24346566
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||||| ||||||||| |||||  |||||||||||| ||||||||||||    
T  24346618 tgttaagagtcccacatcggataggacatggcctgacaatgtgtttataagtg 24346566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 270 - 320
Target Start/End: Original strand, 8287771 - 8287821
Alignment:
Q  270 ttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    ||||||||  |||||||| |||||||||| ||| |||||||||||||||||    
T  8287771 ttaagagtcacacatcggctaggagttggtctggcaatttgtttataagtg 8287821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 270 - 320
Target Start/End: Original strand, 9368799 - 9368849
Alignment:
Q  270 ttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||| ||||||||| |||||| |||| ||||||| ||||||||||||    
T  9368799 ttaagagtcccacatcggataggagatggcatgacaatgtgtttataagtg 9368849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 264 - 320
Target Start/End: Original strand, 9368558 - 9368614
Alignment:
Q  264 aaactgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    ||||||||||||||   ||||||| |||||| |||| ||||||| ||||||||||||    
T  9368558 aaactgttaagagtcatacatcggataggagatggcgtgacaatgtgtttataagtg 9368614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 268 - 320
Target Start/End: Original strand, 13296640 - 13296692
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||| | |||||||||||||| |||||||  ||||||||| ||||||||||    
T  13296640 tgttaaaaattccacatcggttaagagttggtttgacaatttatttataagtg 13296692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 268 - 320
Target Start/End: Complemental strand, 17150350 - 17150298
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||||||| ||||||| |||||| ||| |||| ||| ||||||||||||    
T  17150350 tgttaagagttcaacatcggataggagatggtctgaaaatgtgtttataagtg 17150298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 268 - 320
Target Start/End: Complemental strand, 18333582 - 18333530
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||| | ||||||||| |||||| ||| |||||||| ||||||||||||    
T  18333582 tgttaagaatcccacatcggataggagatggtctgacaatgtgtttataagtg 18333530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 268 - 320
Target Start/End: Original strand, 19705870 - 19705922
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||||| ||||||||| |||||  | |||||||||| ||||||||||||    
T  19705870 tgttaagagtcccacatcgggtaggacatagcctgacaatgtgtttataagtg 19705922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 268 - 320
Target Start/End: Complemental strand, 20510759 - 20510707
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||||  ||||||||| |||| | |||||||||||| ||||||||||||    
T  20510759 tgttaagagccccacatcggataggtgatggcctgacaatatgtttataagtg 20510707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 268 - 320
Target Start/End: Complemental strand, 33337355 - 33337303
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||||| |||||| || |||| | |||||||||||| ||||||||||||    
T  33337355 tgttaagagtcccacattggataggtgatggcctgacaatatgtttataagtg 33337303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 268 - 320
Target Start/End: Complemental strand, 41666874 - 41666822
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||||| |||||||||  ||||  |||||||||||| ||||||||||||    
T  41666874 tgttaagagtcccacatcggacaggacatggcctgacaatgtgtttataagtg 41666822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 268 - 320
Target Start/End: Complemental strand, 41667110 - 41667058
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||||| |||||||||  ||||  |||||||||||| ||||||||||||    
T  41667110 tgttaagagtcccacatcggacaggacatggcctgacaatgtgtttataagtg 41667058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 49; Significance: 5e-19; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 268 - 320
Target Start/End: Complemental strand, 27036529 - 27036477
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  27036529 tgttaagagtcccacatcggttaggagttggcctgacaatttgtttataagtg 27036477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 268 - 320
Target Start/End: Complemental strand, 27897722 - 27897670
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  27897722 tgttaagagtcccacatcggttaggagttggcctgacaatttgtttataagtg 27897670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 268 - 320
Target Start/End: Original strand, 32884074 - 32884126
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  32884074 tgttaagagtcccacatcggttaggagttggcctgacaatttgtttataagtg 32884126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 268 - 321
Target Start/End: Original strand, 29718295 - 29718348
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtga 321  Q
    |||||||||| ||||||||||||||||||||| |||||||||||||||||||||    
T  29718295 tgttaagagtcccacatcggttaggagttggcttgacaatttgtttataagtga 29718348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 268 - 320
Target Start/End: Original strand, 2324207 - 2324259
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||||| |||||||||||||||||||| |||||||||||||||||||||    
T  2324207 tgttaagagtcccacatcggttaggagttggtctgacaatttgtttataagtg 2324259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 268 - 320
Target Start/End: Original strand, 2324441 - 2324493
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  2324441 tgttaagagtcccacatcggttagaagttggcctgacaatttgtttataagtg 2324493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 268 - 320
Target Start/End: Original strand, 13486300 - 13486352
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||||| ||||||||||||||||||||||||||||||| ||||||||||    
T  13486300 tgttaagagtcccacatcggttaggagttggcctgacaatttatttataagtg 13486352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 264 - 320
Target Start/End: Complemental strand, 28407914 - 28407858
Alignment:
Q  264 aaactgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||||||||| ||||||||||||||| ||||||| ||||||||||||||||||    
T  28407914 aaactgttaagagtcccacatcggttaggaattggcctaacaatttgtttataagtg 28407858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 268 - 321
Target Start/End: Complemental strand, 17855046 - 17854993
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtga 321  Q
    ||||||||||  |||||||||||||||||| |||||||||||||||||||||||    
T  17855046 tgttaagagtctcacatcggttaggagttgacctgacaatttgtttataagtga 17854993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 267 - 320
Target Start/End: Complemental strand, 37770061 - 37770008
Alignment:
Q  267 ctgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    ||||||||||| ||||||||||||||||||||  ||||||||||||||||||||    
T  37770061 ctgttaagagtcccacatcggttaggagttggtttgacaatttgtttataagtg 37770008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 268 - 320
Target Start/End: Original strand, 5509280 - 5509332
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||||| ||||||| |||||||||||||| |||||||||||||||||||    
T  5509280 tgttaagagtcccacatcagttaggagttggcccgacaatttgtttataagtg 5509332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 268 - 320
Target Start/End: Complemental strand, 17854809 - 17854757
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||||| |||||||||||||||||| |||||||||| ||||||||||||    
T  17854809 tgttaagagtcccacatcggttaggagttagcctgacaatctgtttataagtg 17854757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 268 - 320
Target Start/End: Complemental strand, 19191727 - 19191675
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||||| || |||||||||||||||||||||||| ||||||||||||||    
T  19191727 tgttaagagtcccccatcggttaggagttggcctgacagtttgtttataagtg 19191675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 268 - 320
Target Start/End: Original strand, 21591748 - 21591800
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||||| |||||||| ||||||||||| |||||||||||||||||||||    
T  21591748 tgttaagagtcccacatcgattaggagttggtctgacaatttgtttataagtg 21591800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 268 - 320
Target Start/End: Complemental strand, 36316168 - 36316116
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||||| ||||||| ||||| ||||||||||||||||||||||||||||    
T  36316168 tgttaagagtcccacatcagttagaagttggcctgacaatttgtttataagtg 36316116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 270 - 320
Target Start/End: Original strand, 5509048 - 5509098
Alignment:
Q  270 ttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    ||||||||  ||||||||||||||||||| |||||||||||||||||||||    
T  5509048 ttaagagtcacacatcggttaggagttggtctgacaatttgtttataagtg 5509098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 268 - 321
Target Start/End: Complemental strand, 40718324 - 40718271
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtga 321  Q
    ||||||||||  |||||||||||||||||| ||| |||||||||||||||||||    
T  40718324 tgttaagagtctcacatcggttaggagttgacctaacaatttgtttataagtga 40718271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 268 - 321
Target Start/End: Complemental strand, 31700865 - 31700812
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtga 321  Q
    ||||||||||| |||||||| |||| | |||||||||||| |||||||||||||    
T  31700865 tgttaagagttacacatcggataggtgatggcctgacaatgtgtttataagtga 31700812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 268 - 320
Target Start/End: Original strand, 8424855 - 8424907
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||| ||| ||||||| |||||||||||| |||||||||| ||||||||||    
T  8424855 tgttaaaagtcccacatcagttaggagttggtctgacaatttatttataagtg 8424907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 268 - 320
Target Start/End: Original strand, 17719367 - 17719419
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||||| ||||||||| |||| | |||||||||||| ||||||||||||    
T  17719367 tgttaagagtcccacatcggataggtgatggcctgacaatgtgtttataagtg 17719419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 268 - 320
Target Start/End: Complemental strand, 37812385 - 37812333
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||||| ||||||||| |||||  |||||||||||| ||||||||||||    
T  37812385 tgttaagagtcccacatcggataggacatggcctgacaatgtgtttataagtg 37812333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 268 - 319
Target Start/End: Complemental strand, 33606171 - 33606120
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagt 319  Q
    |||||||||| ||||||||| |||||| |||||||| ||| |||||||||||    
T  33606171 tgttaagagtcccacatcggataggagatggcctgaaaatgtgtttataagt 33606120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 266 - 320
Target Start/End: Complemental strand, 14466529 - 14466475
Alignment:
Q  266 actgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||||||| |||||||||  ||||  |||||||||||| ||||||||||||    
T  14466529 actgttaagagtcccacatcggacaggacatggcctgacaatgtgtttataagtg 14466475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 267 - 320
Target Start/End: Complemental strand, 40379562 - 40379509
Alignment:
Q  267 ctgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    ||||||||||| ||||||||| |||| | |||||||||| | ||||||||||||    
T  40379562 ctgttaagagtcccacatcggataggtgatggcctgacagtgtgtttataagtg 40379509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 268 - 320
Target Start/End: Complemental strand, 94137 - 94085
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||||| ||||||||| |||| | |||||||||| | ||||||||||||    
T  94137 tgttaagagtcccacatcggataggtgatggcctgacagtgtgtttataagtg 94085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 268 - 320
Target Start/End: Original strand, 2029736 - 2029788
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||||| ||||||||| |||||  || ||||||||| ||||||||||||    
T  2029736 tgttaagagtcccacatcggataggacatgacctgacaatgtgtttataagtg 2029788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 268 - 320
Target Start/End: Original strand, 4662198 - 4662250
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||||| ||||||||| |||||  || ||||||||| ||||||||||||    
T  4662198 tgttaagagtcccacatcggataggacatgacctgacaatatgtttataagtg 4662250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 268 - 320
Target Start/End: Complemental strand, 5711556 - 5711504
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||||| |||||||||  ||||  |||||||||||| ||||||||||||    
T  5711556 tgttaagagtcccacatcggaaaggaaatggcctgacaatgtgtttataagtg 5711504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 268 - 320
Target Start/End: Complemental strand, 5711792 - 5711740
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||||| |||||||||  ||||  |||||||||||| ||||||||||||    
T  5711792 tgttaagagtcccacatcggacaggacatggcctgacaatgtgtttataagtg 5711740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 268 - 320
Target Start/End: Complemental strand, 14466292 - 14466240
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    ||||||||||||||||||||  ||||  |||||| ||||| ||||||||||||    
T  14466292 tgttaagagttccacatcggacaggacatggcctaacaatgtgtttataagtg 14466240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 268 - 320
Target Start/End: Original strand, 16419469 - 16419521
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||||| ||||||||| |||||  ||| |||||||| ||||||||||||    
T  16419469 tgttaagagtcccacatcggataggacatggtctgacaatgtgtttataagtg 16419521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 268 - 320
Target Start/End: Original strand, 37840304 - 37840356
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||||| |||||| || |||||| || ||||||||| ||||||||||||    
T  37840304 tgttaagagtcccacattggataggagatgacctgacaatgtgtttataagtg 37840356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 268 - 320
Target Start/End: Complemental strand, 40379326 - 40379274
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||||| ||||||||| |||| | |||||||||| | ||||||||||||    
T  40379326 tgttaagagtcccacatcggataggtgatggcctgacagtgtgtttataagtg 40379274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 47; Significance: 8e-18; HSPs: 26)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 269 - 319
Target Start/End: Complemental strand, 25137419 - 25137369
Alignment:
Q  269 gttaagagttccacatcggttaggagttggcctgacaatttgtttataagt 319  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  25137419 gttaagagtcccacatcggttaggagttggcctgacaatttgtttataagt 25137369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 268 - 321
Target Start/End: Original strand, 51588959 - 51589012
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtga 321  Q
    |||||||||| |||||||||||||||||||| ||||||||||||||||||||||    
T  51588959 tgttaagagtcccacatcggttaggagttggtctgacaatttgtttataagtga 51589012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 268 - 321
Target Start/End: Original strand, 51589193 - 51589246
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtga 321  Q
    |||||||||| |||||||||||||||||||| ||||||||||||||||||||||    
T  51589193 tgttaagagtcccacatcggttaggagttggtctgacaatttgtttataagtga 51589246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 268 - 320
Target Start/End: Original strand, 3169733 - 3169785
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||||| |||||||||||||||||||| |||||||||||||||||||||    
T  3169733 tgttaagagtcccacatcggttaggagttggtctgacaatttgtttataagtg 3169785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 268 - 320
Target Start/End: Complemental strand, 28408159 - 28408107
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||||| ||||||||||||| |||||| |||||||||||||||||||||    
T  28408159 tgttaagagtcccacatcggttagaagttggtctgacaatttgtttataagtg 28408107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 268 - 321
Target Start/End: Original strand, 3169967 - 3170021
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttg-tttataagtga 321  Q
    |||||||||| |||||||||||||||||||| ||||||||||| |||||||||||    
T  3169967 tgttaagagtcccacatcggttaggagttggtctgacaatttgttttataagtga 3170021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 268 - 321
Target Start/End: Original strand, 51590007 - 51590060
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtga 321  Q
    |||||||||| ||||||| |||||||||| | ||||||||||||||||||||||    
T  51590007 tgttaagagtcccacatcagttaggagtttgtctgacaatttgtttataagtga 51590060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 268 - 320
Target Start/End: Original strand, 35772231 - 35772283
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||||| ||||||||| |||||| |||||||||||| ||||||||||||    
T  35772231 tgttaagagtcccacatcggataggagatggcctgacaatgtgtttataagtg 35772283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 268 - 320
Target Start/End: Original strand, 52127688 - 52127740
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||||| ||||||||||||||||||| ||| | ||||||||||||||||    
T  52127688 tgttaagagtcccacatcggttaggagttgacctaagaatttgtttataagtg 52127740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 268 - 318
Target Start/End: Original strand, 33156936 - 33156986
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataag 318  Q
    |||||||||||||||||||| |||||| ||| |||||||| ||||||||||    
T  33156936 tgttaagagttccacatcggataggagatggtctgacaatgtgtttataag 33156986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 268 - 320
Target Start/End: Complemental strand, 12245079 - 12245027
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||||| | |||||| ||||||||||| ||| |||||||||||||||||    
T  12245079 tgttaagagtcctacatcgattaggagttggtctggcaatttgtttataagtg 12245027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 264 - 319
Target Start/End: Original strand, 13386211 - 13386266
Alignment:
Q  264 aaactgttaagagttccacatcggttaggagttggcctgacaatttgtttataagt 319  Q
    |||||||||||||||||||||||| |||||  ||||||| |||| ||| |||||||    
T  13386211 aaactgttaagagttccacatcggataggacatggcctggcaatgtgtatataagt 13386266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 267 - 317
Target Start/End: Original strand, 38080571 - 38080621
Alignment:
Q  267 ctgttaagagttccacatcggttaggagttggcctgacaatttgtttataa 317  Q
    ||||||||||| ||||||||| | |||| |||||||||||| |||||||||    
T  38080571 ctgttaagagtcccacatcggatgggagatggcctgacaatgtgtttataa 38080621  T

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Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 271 - 320
Target Start/End: Complemental strand, 2859506 - 2859457
Alignment:
Q  271 taagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    ||||||| ||||||||| |||| | |||||||||||| ||||||||||||    
T  2859506 taagagtcccacatcggataggtgatggcctgacaatgtgtttataagtg 2859457  T

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Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 267 - 320
Target Start/End: Complemental strand, 20208644 - 20208591
Alignment:
Q  267 ctgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    ||||||||||| ||||||||| |||||  ||| |||||||| ||||||||||||    
T  20208644 ctgttaagagtcccacatcggataggacatggtctgacaatgtgtttataagtg 20208591  T

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Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 321
Target Start/End: Original strand, 52961549 - 52961602
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtga 321  Q
    ||||||| || ||||||||| |||||| ||| |||||||| |||||||||||||    
T  52961549 tgttaagtgtcccacatcggataggagatggtctgacaatgtgtttataagtga 52961602  T

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Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 268 - 316
Target Start/End: Original strand, 855948 - 855996
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttata 316  Q
    |||||||||||||||| ||| |||||  |||||||||||| ||||||||    
T  855948 tgttaagagttccacaccggataggacatggcctgacaatgtgtttata 855996  T

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Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 268 - 320
Target Start/End: Complemental strand, 4112888 - 4112836
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||||| ||||||||| | |||  |||||||||||| ||||||||||||    
T  4112888 tgttaagagtcccacatcggatgggacatggcctgacaatgtgtttataagtg 4112836  T

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Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 268 - 320
Target Start/End: Original strand, 11924888 - 11924940
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    ||||||||||| |||||||| |||| | ||| |||||||| ||||||||||||    
T  11924888 tgttaagagttacacatcggataggtgatggtctgacaatatgtttataagtg 11924940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 268 - 320
Target Start/End: Complemental strand, 15986450 - 15986398
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||||| | ||||||| |||||| | |||||||||| ||||||||||||    
T  15986450 tgttaagagtcctacatcggataggagatagcctgacaatgtgtttataagtg 15986398  T

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Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 268 - 320
Target Start/End: Original strand, 25713360 - 25713412
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||||| ||||||||| |||| | ||| |||||||| ||||||||||||    
T  25713360 tgttaagagtcccacatcggataggtgatggtctgacaatgtgtttataagtg 25713412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 265 - 321
Target Start/End: Original strand, 26176872 - 26176928
Alignment:
Q  265 aactgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtga 321  Q
    ||||||||||||| |||||||||  ||||  |||||||||||| || ||||||||||    
T  26176872 aactgttaagagtcccacatcggacaggacatggcctgacaatgtgcttataagtga 26176928  T

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Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 272 - 320
Target Start/End: Complemental strand, 39348232 - 39348184
Alignment:
Q  272 aagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||| ||||||||| |||||| | |||||||||| ||||||||||||    
T  39348232 aagagtcccacatcggataggagatagcctgacaatgtgtttataagtg 39348184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 268 - 320
Target Start/End: Complemental strand, 51459947 - 51459895
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||||| ||||||||| |||| | |||||| ||||| ||||||||||||    
T  51459947 tgttaagagtcccacatcggataggtgatggcctaacaatgtgtttataagtg 51459895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 268 - 320
Target Start/End: Complemental strand, 51460199 - 51460147
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||||| ||||||||| |||| | |||||| ||||| ||||||||||||    
T  51460199 tgttaagagtcccacatcggataggtgatggcctaacaatgtgtttataagtg 51460147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 268 - 320
Target Start/End: Complemental strand, 52650888 - 52650836
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    ||||| |||| ||||||||| |||||| ||||| |||||| ||||||||||||    
T  52650888 tgttaggagtcccacatcggataggagatggccggacaatgtgtttataagtg 52650836  T

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Target: scaffold0334 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 268 - 320
Target Start/End: Complemental strand, 4546 - 4494
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||||| ||||||| ||||||||||||||||||||||||||||||||||    
T  4546 tgttaagagtgccacatcagttaggagttggcctgacaatttgtttataagtg 4494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0481 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0481
Description:

Target: scaffold0481; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 268 - 320
Target Start/End: Complemental strand, 3588 - 3536
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||||| ||||||||||||||||||| | ||||||||||||||||||||    
T  3588 tgttaagagtcccacatcggttaggagttgacatgacaatttgtttataagtg 3536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0481; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 268 - 320
Target Start/End: Complemental strand, 3354 - 3302
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    ||||||||||  ||||||| ||||||||||||| || ||||||||||||||||    
T  3354 tgttaagagtctcacatcgattaggagttggccagataatttgtttataagtg 3302  T

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Target: scaffold0005 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 267 - 317
Target Start/End: Original strand, 56425 - 56475
Alignment:
Q  267 ctgttaagagttccacatcggttaggagttggcctgacaatttgtttataa 317  Q
    ||||||||||| |||||||||||||||||||  ||||||||||||||||||    
T  56425 ctgttaagagtcccacatcggttaggagttgatctgacaatttgtttataa 56475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1034 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold1034
Description:

Target: scaffold1034; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 267 - 320
Target Start/End: Original strand, 3202 - 3255
Alignment:
Q  267 ctgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    ||||||||||| | ||||||||||||||||||||| || |||||||||||||||    
T  3202 ctgttaagagtcctacatcggttaggagttggccttactatttgtttataagtg 3255  T

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Target: scaffold0001 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 269 - 320
Target Start/End: Original strand, 429841 - 429892
Alignment:
Q  269 gttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    ||||||||| ||||||||| |||| | |||||||||||| ||||||||||||    
T  429841 gttaagagtcccacatcggataggtgatggcctgacaatgtgtttataagtg 429892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 321
Target Start/End: Original strand, 5857 - 5910
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtga 321  Q
    |||||| ||||||||||||| ||| || |||| ||||||| |||||||||||||    
T  5857 tgttaacagttccacatcggatagaagatggcatgacaatatgtttataagtga 5910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0519 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 268 - 320
Target Start/End: Original strand, 2118 - 2170
Alignment:
Q  268 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtg 320  Q
    |||||||||| |||||||||  ||||  |||||||||||| ||||||||||||    
T  2118 tgttaagagtcccacatcggacaggacatggcctgacaatgtgtttataagtg 2170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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