View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16020_low_94 (Length: 270)
Name: NF16020_low_94
Description: NF16020
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16020_low_94 |
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Alignment Details
Target: chr2 (Bit Score: 222; Significance: 1e-122; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 24 - 249
Target Start/End: Complemental strand, 8188285 - 8188060
Alignment:
| Q |
24 |
gtctcttgaagagaggtctcaagctcatcaagactgaaaccttcaagcgaataacgagctctagtacgcatacaaatagcatcctcagtatctatgtcta |
123 |
Q |
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| T |
8188285 |
gtctcttgaagaaaggtctcaagctcatcaagactgaaaccttcaagcgaataacgagctctagtacgcatacaaatagcatcctcagtatctatgtcta |
8188186 |
T |
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| Q |
124 |
tcactgggcttcggggtttcgttgtgttgcttatgtcttctatcctaaaaccatcactagtaccactaatcaagtcattcttcttctccttatcaatctc |
223 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8188185 |
tcactgggcttcggggtttcgttgtgttgcttatgtcttctatcctaaaaccatcactagtaccactaatcaagtcattcttcttctccttatcaatctc |
8188086 |
T |
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| Q |
224 |
caattgagatatcatacctgccgctt |
249 |
Q |
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|||||||||||||||||||||||||| |
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| T |
8188085 |
caattgagatatcatacctgccgctt |
8188060 |
T |
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