View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16021_low_11 (Length: 265)
Name: NF16021_low_11
Description: NF16021
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16021_low_11 |
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Alignment Details
Target: chr1 (Bit Score: 224; Significance: 1e-123; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 1 - 255
Target Start/End: Complemental strand, 28119261 - 28119002
Alignment:
| Q |
1 |
tacacataagaccaacaaaaagaaattaatagaatcatctctcttcttgaattgatgatgaattacatcccttacatctcaatcaatctacttacaacat |
100 |
Q |
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| T |
28119261 |
tacacataagaccaacaaaaagaaattaatagaatcatctctcttcttgaattgatgatggattacatcccttacatctcaatcaatctacttacaacat |
28119162 |
T |
|
| Q |
101 |
attttaattaatattacggctacattacatata-----tatcatcactcatcaacacagttagctataaaagttcaataatttcatcatcacaaaaaata |
195 |
Q |
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| T |
28119161 |
attttaattaatattacggctacattacatatatatattatcatcactcatcgacacagttagctataaaagttcaataatttcaacatcacaaaaaata |
28119062 |
T |
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| Q |
196 |
ctgattaatgtctcatcaacaaagtaatttgttagagacacaaacacatcctttgcttct |
255 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
28119061 |
ctgattaatgtctcatcaacaaagtaatttgttagagacacaaacacatcctttgattct |
28119002 |
T |
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