View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16022_high_8 (Length: 413)

Name: NF16022_high_8
Description: NF16022
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16022_high_8
NF16022_high_8
[»] chr7 (28 HSPs)
chr7 (211-356)||(46358515-46358660)
chr7 (215-356)||(30884148-30884289)
chr7 (216-356)||(16933169-16933310)
chr7 (216-356)||(16938552-16938693)
chr7 (216-356)||(47340146-47340287)
chr7 (216-356)||(763697-763837)
chr7 (216-356)||(31660069-31660209)
chr7 (232-356)||(35736964-35737088)
chr7 (216-356)||(41911038-41911175)
chr7 (215-304)||(20000652-20000741)
chr7 (219-277)||(24359874-24359932)
chr7 (216-279)||(5757386-5757449)
chr7 (216-278)||(44141255-44141317)
chr7 (232-284)||(39007647-39007699)
chr7 (219-277)||(11732652-11732710)
chr7 (211-285)||(15974933-15975006)
chr7 (232-284)||(34875505-34875557)
chr7 (216-279)||(27335632-27335694)
chr7 (317-356)||(46572608-46572647)
chr7 (215-273)||(6797394-6797452)
chr7 (22-95)||(34726648-34726721)
chr7 (211-279)||(30428868-30428935)
chr7 (243-279)||(46024053-46024089)
chr7 (243-282)||(48690921-48690960)
chr7 (317-356)||(48692021-48692060)
chr7 (218-279)||(46346719-46346780)
chr7 (45-93)||(5832324-5832372)
chr7 (216-284)||(25778837-25778904)
[»] chr4 (43 HSPs)
chr4 (216-356)||(49425983-49426123)
chr4 (216-355)||(53441320-53441459)
chr4 (215-356)||(15051062-15051203)
chr4 (215-356)||(35291474-35291615)
chr4 (216-356)||(30597699-30597839)
chr4 (216-356)||(51921191-51921331)
chr4 (215-356)||(27865663-27865804)
chr4 (215-356)||(46672438-46672578)
chr4 (215-356)||(13635651-13635792)
chr4 (216-345)||(36011843-36011972)
chr4 (216-356)||(11785974-11786114)
chr4 (216-356)||(11798141-11798281)
chr4 (216-356)||(49492438-49492578)
chr4 (216-356)||(1621875-1622016)
chr4 (215-356)||(55765480-55765621)
chr4 (210-284)||(10472491-10472565)
chr4 (219-277)||(30357810-30357868)
chr4 (211-295)||(26578176-26578260)
chr4 (220-277)||(38010145-38010202)
chr4 (218-295)||(38244946-38245023)
chr4 (219-279)||(1729618-1729678)
chr4 (216-284)||(25574126-25574194)
chr4 (218-278)||(24686574-24686634)
chr4 (219-273)||(20861583-20861637)
chr4 (232-284)||(16298937-16298989)
chr4 (317-356)||(638965-639004)
chr4 (317-356)||(10473619-10473658)
chr4 (317-356)||(26577295-26577334)
chr4 (317-356)||(45256866-45256905)
chr4 (218-284)||(29826604-29826669)
chr4 (243-279)||(4168384-4168420)
chr4 (243-279)||(26447415-26447451)
chr4 (243-279)||(36621704-36621740)
chr4 (216-284)||(50643743-50643810)
chr4 (223-262)||(805109-805148)
chr4 (216-279)||(27764240-27764302)
chr4 (317-356)||(38245889-38245928)
chr4 (216-279)||(45255975-45256037)
chr4 (317-356)||(51836361-51836400)
chr4 (243-285)||(22181242-22181284)
chr4 (318-356)||(50644642-50644680)
chr4 (246-279)||(637883-637916)
chr4 (318-346)||(9551626-9551654)
[»] chr1 (44 HSPs)
chr1 (216-356)||(49936863-49937003)
chr1 (216-356)||(24635926-24636066)
chr1 (216-356)||(18618835-18618975)
chr1 (216-356)||(20434648-20434788)
chr1 (215-356)||(25888954-25889095)
chr1 (216-356)||(19897686-19897826)
chr1 (216-356)||(43452542-43452682)
chr1 (216-356)||(48762257-48762397)
chr1 (216-356)||(50351803-50351943)
chr1 (215-356)||(16975953-16976095)
chr1 (216-353)||(6314115-6314253)
chr1 (216-319)||(28375464-28375567)
chr1 (216-295)||(4097895-4097974)
chr1 (216-293)||(11421594-11421671)
chr1 (219-295)||(23175509-23175585)
chr1 (216-295)||(34369660-34369739)
chr1 (219-277)||(21256777-21256835)
chr1 (232-284)||(33097421-33097473)
chr1 (317-356)||(11422541-11422580)
chr1 (216-279)||(37639341-37639404)
chr1 (234-285)||(44260536-44260587)
chr1 (232-279)||(51801736-51801783)
chr1 (232-284)||(31529663-31529715)
chr1 (215-279)||(35198184-35198248)
chr1 (232-284)||(44688608-44688660)
chr1 (243-282)||(16115877-16115916)
chr1 (216-279)||(18056784-18056846)
chr1 (317-356)||(23174436-23174475)
chr1 (223-262)||(41033946-41033985)
chr1 (318-356)||(23817412-23817450)
chr1 (219-277)||(31083365-31083423)
chr1 (218-266)||(13590469-13590517)
chr1 (317-352)||(4097147-4097182)
chr1 (216-279)||(22348039-22348101)
chr1 (223-262)||(37228364-37228403)
chr1 (317-347)||(16116998-16117028)
chr1 (219-277)||(20507286-20507344)
chr1 (318-356)||(23921005-23921043)
chr1 (232-273)||(13673907-13673948)
chr1 (232-273)||(20372221-20372262)
chr1 (216-277)||(41033262-41033322)
chr1 (317-361)||(8401431-8401475)
chr1 (318-346)||(23319079-23319107)
chr1 (216-284)||(28323330-28323398)
[»] chr8 (39 HSPs)
chr8 (216-356)||(41099182-41099322)
chr8 (215-356)||(43690639-43690780)
chr8 (216-356)||(1149949-1150089)
chr8 (216-356)||(19784271-19784411)
chr8 (216-356)||(34633247-34633387)
chr8 (215-353)||(10237353-10237491)
chr8 (213-356)||(41451102-41451245)
chr8 (216-356)||(7857680-7857820)
chr8 (213-356)||(30413911-30414054)
chr8 (216-354)||(15227030-15227168)
chr8 (219-277)||(9852273-9852331)
chr8 (219-277)||(34648133-34648191)
chr8 (215-282)||(15260851-15260918)
chr8 (212-277)||(23396473-23396538)
chr8 (232-279)||(40247288-40247335)
chr8 (219-277)||(35302591-35302649)
chr8 (216-273)||(2522867-2522924)
chr8 (317-356)||(4835552-4835591)
chr8 (317-356)||(4840997-4841036)
chr8 (216-279)||(32987448-32987510)
chr8 (318-356)||(1209758-1209796)
chr8 (219-265)||(40023279-40023325)
chr8 (242-279)||(8550529-8550566)
chr8 (232-277)||(12355438-12355483)
chr8 (240-284)||(30651973-30652017)
chr8 (216-284)||(42433701-42433768)
chr8 (216-279)||(39021975-39022037)
chr8 (317-356)||(39657742-39657781)
chr8 (318-356)||(2751207-2751245)
chr8 (245-279)||(4836704-4836738)
chr8 (245-279)||(4842149-4842183)
chr8 (216-278)||(7058114-7058175)
chr8 (216-262)||(18022053-18022099)
chr8 (30-84)||(34898095-34898149)
chr8 (216-278)||(40012186-40012247)
chr8 (216-277)||(1208709-1208769)
chr8 (243-279)||(7614094-7614130)
chr8 (232-284)||(13526669-13526721)
chr8 (232-284)||(13616204-13616256)
[»] chr2 (32 HSPs)
chr2 (216-356)||(8149831-8149971)
chr2 (216-356)||(8154455-8154595)
chr2 (216-356)||(39355035-39355175)
chr2 (216-370)||(9143585-9143739)
chr2 (216-356)||(15016492-15016632)
chr2 (216-356)||(1292105-1292245)
chr2 (215-356)||(7487180-7487321)
chr2 (218-356)||(34464713-34464851)
chr2 (16-85)||(3558673-3558742)
chr2 (216-277)||(18762867-18762928)
chr2 (216-295)||(2263573-2263652)
chr2 (218-287)||(5098718-5098787)
chr2 (220-284)||(39548046-39548110)
chr2 (164-215)||(3558742-3558793)
chr2 (317-354)||(2264625-2264662)
chr2 (317-356)||(18297202-18297241)
chr2 (216-279)||(18298114-18298176)
chr2 (216-290)||(36636929-36637003)
chr2 (219-277)||(41346045-41346103)
chr2 (216-277)||(25192892-25192952)
chr2 (216-285)||(25995286-25995355)
chr2 (371-403)||(3558785-3558817)
chr2 (306-354)||(18762927-18762975)
chr2 (216-279)||(20709774-20709836)
chr2 (223-262)||(21155441-21155480)
chr2 (223-262)||(27974291-27974330)
chr2 (223-262)||(28060820-28060859)
chr2 (216-262)||(3925578-3925624)
chr2 (232-278)||(13081864-13081910)
chr2 (232-273)||(24024633-24024674)
chr2 (324-356)||(4578593-4578625)
chr2 (232-276)||(40853685-40853729)
[»] chr6 (22 HSPs)
chr6 (215-361)||(7089081-7089227)
chr6 (216-353)||(31216662-31216799)
chr6 (220-356)||(6900807-6900943)
chr6 (216-356)||(1449542-1449682)
chr6 (216-356)||(1536822-1536962)
chr6 (216-356)||(15493174-15493314)
chr6 (217-297)||(34870071-34870151)
chr6 (219-277)||(30908655-30908713)
chr6 (216-282)||(33346371-33346436)
chr6 (216-279)||(35119239-35119297)
chr6 (232-273)||(27079939-27079980)
chr6 (232-284)||(16968021-16968073)
chr6 (296-356)||(34869989-34870049)
chr6 (219-274)||(7764444-7764499)
chr6 (317-351)||(24736574-24736608)
chr6 (317-351)||(24736610-24736644)
chr6 (218-279)||(18611190-18611251)
chr6 (216-265)||(32556344-32556393)
chr6 (321-361)||(878365-878405)
chr6 (243-275)||(12394387-12394419)
chr6 (247-279)||(24737694-24737726)
chr6 (243-279)||(29157252-29157288)
[»] chr3 (40 HSPs)
chr3 (214-356)||(26662464-26662606)
chr3 (216-356)||(3475333-3475473)
chr3 (216-356)||(30947837-30947977)
chr3 (216-356)||(47335032-47335172)
chr3 (216-356)||(2941852-2941992)
chr3 (216-356)||(9106267-9106407)
chr3 (216-356)||(9595906-9596046)
chr3 (216-356)||(19284671-19284811)
chr3 (216-356)||(46237684-46237824)
chr3 (217-356)||(33413939-33414078)
chr3 (216-356)||(6097610-6097750)
chr3 (216-356)||(54379163-54379302)
chr3 (220-356)||(26960630-26960766)
chr3 (216-356)||(10986352-10986492)
chr3 (219-277)||(41192355-41192413)
chr3 (219-277)||(51846785-51846843)
chr3 (216-284)||(47728388-47728456)
chr3 (216-284)||(51682000-51682068)
chr3 (215-285)||(19385312-19385381)
chr3 (219-277)||(34563352-34563410)
chr3 (218-279)||(50754008-50754068)
chr3 (216-285)||(51362435-51362503)
chr3 (317-356)||(19384415-19384454)
chr3 (216-275)||(23755285-23755344)
chr3 (218-273)||(32232993-32233048)
chr3 (317-356)||(50755163-50755202)
chr3 (243-279)||(52987653-52987689)
chr3 (232-284)||(53594984-53595036)
chr3 (317-356)||(7044391-7044430)
chr3 (216-279)||(7045303-7045365)
chr3 (216-279)||(23699327-23699390)
chr3 (216-279)||(23717782-23717845)
chr3 (216-279)||(23736238-23736301)
chr3 (232-279)||(28299955-28300002)
chr3 (216-262)||(9180111-9180157)
chr3 (246-279)||(16277417-16277450)
chr3 (324-356)||(31853164-31853196)
chr3 (232-272)||(37319470-37319510)
chr3 (232-284)||(39195106-39195158)
chr3 (318-346)||(47729134-47729162)
[»] scaffold0045 (1 HSPs)
scaffold0045 (216-356)||(33684-33824)
[»] chr5 (23 HSPs)
chr5 (220-356)||(14940282-14940418)
chr5 (216-356)||(3883961-3884101)
chr5 (216-356)||(14394468-14394608)
chr5 (216-356)||(15416664-15416804)
chr5 (216-356)||(37456680-37456820)
chr5 (216-356)||(26637763-26637903)
chr5 (216-341)||(13552983-13553108)
chr5 (216-297)||(30783435-30783516)
chr5 (216-290)||(33868155-33868229)
chr5 (216-284)||(16552637-16552705)
chr5 (296-356)||(30783538-30783597)
chr5 (234-279)||(4674978-4675023)
chr5 (218-279)||(16668797-16668858)
chr5 (317-355)||(28069282-28069320)
chr5 (218-279)||(13362772-13362832)
chr5 (218-279)||(25017220-25017280)
chr5 (215-279)||(28070156-28070219)
chr5 (215-279)||(34329126-34329189)
chr5 (317-356)||(34330157-34330196)
chr5 (317-346)||(2826098-2826127)
chr5 (317-346)||(16667722-16667751)
chr5 (218-279)||(18465559-18465620)
chr5 (243-279)||(42512225-42512261)
[»] scaffold0581 (1 HSPs)
scaffold0581 (216-356)||(8347-8487)
[»] scaffold0074 (1 HSPs)
scaffold0074 (211-356)||(24269-24414)
[»] scaffold0571 (2 HSPs)
scaffold0571 (216-297)||(661-742)
scaffold0571 (296-356)||(579-639)
[»] scaffold0238 (1 HSPs)
scaffold0238 (216-285)||(25229-25297)
[»] scaffold0338 (1 HSPs)
scaffold0338 (317-356)||(6484-6523)
[»] scaffold0460 (1 HSPs)
scaffold0460 (232-273)||(1620-1661)
[»] scaffold0012 (1 HSPs)
scaffold0012 (216-273)||(119202-119259)
[»] scaffold0006 (2 HSPs)
scaffold0006 (216-273)||(209326-209383)
scaffold0006 (232-273)||(171521-171562)
[»] scaffold0097 (1 HSPs)
scaffold0097 (216-279)||(13613-13675)
[»] scaffold0544 (1 HSPs)
scaffold0544 (217-279)||(10678-10739)
[»] scaffold0002 (1 HSPs)
scaffold0002 (216-266)||(450202-450252)
[»] scaffold0558 (2 HSPs)
scaffold0558 (217-278)||(2448-2508)
scaffold0558 (217-278)||(5860-5920)
[»] scaffold0069 (1 HSPs)
scaffold0069 (232-273)||(51375-51416)
[»] scaffold0189 (1 HSPs)
scaffold0189 (216-284)||(11188-11255)


Alignment Details
Target: chr7 (Bit Score: 114; Significance: 1e-57; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 211 - 356
Target Start/End: Original strand, 46358515 - 46358660
Alignment:
Q  211 aaataggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataatttt 310  Q
    |||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||  ||||    
T  46358515 aaataggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagattttttttattttgaacaaaaatggtttt 46358614  T
Q  311 agctcactttgggggtgtaggaagcaattatgttggaatttatgca 356  Q
     ||||||||||||||||||||||||||||||||||| |||||||||    
T  46358615 ggctcactttgggggtgtaggaagcaattatgttgggatttatgca 46358660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 215 - 356
Target Start/End: Complemental strand, 30884289 - 30884148
Alignment:
Q  215 aggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttagct 314  Q
    |||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||  |||| |||    
T  30884289 aggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagatttcttttattttgaacaaaaatggttttggct 30884190  T
Q  315 cactttgggggtgtaggaagcaattatgttggaatttatgca 356  Q
    |||||||||||||||||||||||||||||| | |||||||||    
T  30884189 cactttgggggtgtaggaagcaattatgttaggatttatgca 30884148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 216 - 356
Target Start/End: Complemental strand, 16933310 - 16933169
Alignment:
Q  216 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttagctc 315  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| |||||||||||||||  |||| ||||    
T  16933310 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttgattttgaacaaaaatggttttggctc 16933211  T
Q  316 actttg-ggggtgtaggaagcaattatgttggaatttatgca 356  Q
    |||||| ||||||||||||||||||||||||  |||||||||    
T  16933210 actttggggggtgtaggaagcaattatgttgagatttatgca 16933169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 216 - 356
Target Start/End: Complemental strand, 16938693 - 16938552
Alignment:
Q  216 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttagctc 315  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| |||||||||||||||  |||| ||||    
T  16938693 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttgattttgaacaaaaatggttttggctc 16938594  T
Q  316 actttg-ggggtgtaggaagcaattatgttggaatttatgca 356  Q
    |||||| ||||||||||||||||||||||||  |||||||||    
T  16938593 actttggggggtgtaggaagcaattatgttgagatttatgca 16938552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 216 - 356
Target Start/End: Original strand, 47340146 - 47340287
Alignment:
Q  216 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaa-cacatcacaaccatcaaatttattttattttgaacaaaaataattttagct 314  Q
    ||||||||||||||| ||||||| |||| ||||||||||||||||||| |||||||||||||||| |||| |||||||||||||||||||  |||| |||    
T  47340146 ggcaaaagttatggtgcataagttattttcttatgcaccgtgcataaaacacatcacaaccatcagatttcttttattttgaacaaaaatggttttggct 47340245  T
Q  315 cactttgggggtgtaggaagcaattatgttggaatttatgca 356  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  47340246 cactttgggggtgtaggaagcaattatgttgggatttatgca 47340287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 216 - 356
Target Start/End: Original strand, 763697 - 763837
Alignment:
Q  216 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttagctc 315  Q
    ||||||||||||||| |||||| |||||||||||||||||||||||||||| |||||||||||| |||| |||||||||||||| ||||  |||| ||||    
T  763697 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacgtcacaaccatcagatttcttttattttgaacataaatggttttggctc 763796  T
Q  316 actttgggggtgtaggaagcaattatgttggaatttatgca 356  Q
     |||||||||||||||||||||||||||||| |||||||||    
T  763797 gctttgggggtgtaggaagcaattatgttgggatttatgca 763837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 216 - 356
Target Start/End: Original strand, 31660069 - 31660209
Alignment:
Q  216 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttagctc 315  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| |||| |||||||||||| ||||||  |||| | ||    
T  31660069 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagatttcttttattttgaataaaaatggttttggttc 31660168  T
Q  316 actttgggggtgtaggaagcaattatgttggaatttatgca 356  Q
    ||||||||||||||||||||||||||||||  |||||||||    
T  31660169 actttgggggtgtaggaagcaattatgttgagatttatgca 31660209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 232 - 356
Target Start/End: Original strand, 35736964 - 35737088
Alignment:
Q  232 cataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttagctcactttgggggtgtagg 331  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||  |||| ||||||||||||| ||||||    
T  35736964 cataagttatttccttatgcaccgtgcataaacacatcacaaccatcatatttcttttattttgaacaaaaatggttttggctcactttggggatgtagg 35737063  T
Q  332 aagcaattatgttggaatttatgca 356  Q
    ||||||||||||||| |||||||||    
T  35737064 aagcaattatgttgggatttatgca 35737088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 216 - 356
Target Start/End: Complemental strand, 41911175 - 41911038
Alignment:
Q  216 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttagctc 315  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| ||   |||||||||||||||||||  |||| | ||    
T  41911175 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagat---ttttattttgaacaaaaatggttttggttc 41911079  T
Q  316 actttgggggtgtaggaagcaattatgttggaatttatgca 356  Q
    |||||| |||||||||||||||||||||||| |||||||||    
T  41911078 actttgagggtgtaggaagcaattatgttgggatttatgca 41911038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 215 - 304
Target Start/End: Complemental strand, 20000741 - 20000652
Alignment:
Q  215 aggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaat 304  Q
    |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||| |||| ||| | |||||||||||||    
T  20000741 aggcaaaagttatggtgcataagtcatttacttatgcaccgtgcataaacacatcacaaccatcagatttctttcactttgaacaaaaat 20000652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 219 - 277
Target Start/End: Original strand, 24359874 - 24359932
Alignment:
Q  219 aaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccat 277  Q
    |||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||||    
T  24359874 aaaagttatggtgcataagtcatttccttatgcaccgtgcatcaacacttcacaaccat 24359932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 216 - 279
Target Start/End: Original strand, 5757386 - 5757449
Alignment:
Q  216 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatca 279  Q
    ||||||||||||  | |||||| |||||||||||||||||||||||||||| ||||||||||||    
T  5757386 ggcaaaagttattatgcataagacatttccttatgcaccgtgcataaacacttcacaaccatca 5757449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 216 - 278
Target Start/End: Complemental strand, 44141317 - 44141255
Alignment:
Q  216 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatc 278  Q
    ||||||||||||  | ||||||||||||||||||||||| ||||||||||| |||||||||||    
T  44141317 ggcaaaagttatcatgcataagtcatttccttatgcaccctgcataaacacttcacaaccatc 44141255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 232 - 284
Target Start/End: Complemental strand, 39007699 - 39007647
Alignment:
Q  232 cataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaattt 284  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||||| ||||    
T  39007699 cataagtcatttccttatgcaccctgcataaacacttcacaaccatcatattt 39007647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 219 - 277
Target Start/End: Complemental strand, 11732710 - 11732652
Alignment:
Q  219 aaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccat 277  Q
    |||||||||||| |||||| ||||| ||||||||| |||||||||||| ||||||||||    
T  11732710 aaaagttatggtgcataagccattttcttatgcactgtgcataaacacttcacaaccat 11732652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 211 - 285
Target Start/End: Complemental strand, 15975006 - 15974933
Alignment:
Q  211 aaataggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaattta 285  Q
    |||| ||||||||||||||| ||||||  | | ||||||||||||||||||||||| |||||||||||| |||||    
T  15975006 aaattggcaaaagttatggtgcataaggaaat-ccttatgcaccgtgcataaacacttcacaaccatcatattta 15974933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 232 - 284
Target Start/End: Original strand, 34875505 - 34875557
Alignment:
Q  232 cataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaattt 284  Q
    |||||| |||||||||||||||| ||||||||||| |||||||||||| ||||    
T  34875505 cataagccatttccttatgcaccctgcataaacacttcacaaccatcagattt 34875557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 216 - 279
Target Start/End: Complemental strand, 27335694 - 27335632
Alignment:
Q  216 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatca 279  Q
    ||||||||||||  || ||||||||||| |||||||||| ||||||||||| ||||||||||||    
T  27335694 ggcaaaagttattataaataagtcattttcttatgcacc-tgcataaacacttcacaaccatca 27335632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 317 - 356
Target Start/End: Complemental strand, 46572647 - 46572608
Alignment:
Q  317 ctttgggggtgtaggaagcaattatgttggaatttatgca 356  Q
    |||||||||||||||||||||||||||||| |||||||||    
T  46572647 ctttgggggtgtaggaagcaattatgttgggatttatgca 46572608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 215 - 273
Target Start/End: Complemental strand, 6797452 - 6797394
Alignment:
Q  215 aggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaa 273  Q
    |||||||||||||  | ||||||||||||||||||||| | ||||||||||| ||||||    
T  6797452 aggcaaaagttattatgcataagtcatttccttatgcatcctgcataaacacttcacaa 6797394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 22 - 95
Target Start/End: Complemental strand, 34726721 - 34726648
Alignment:
Q  22 tccatcaaaatatgtcttttataaacatccattaaaatcaataaaagaaatgcatattgacttgaatagtcttt 95  Q
    ||||||||||||| ||||   ||| ||||||| |||| |||||||||| || ||||||||||| ||||||||||    
T  34726721 tccatcaaaatatttcttcagtaagcatccatgaaaaccaataaaagagatacatattgacttaaatagtcttt 34726648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 211 - 279
Target Start/End: Original strand, 30428868 - 30428935
Alignment:
Q  211 aaataggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatca 279  Q
    |||| ||||||||||||||| ||||||  | | ||||||||||||||||||||||  ||||||||||||    
T  30428868 aaattggcaaaagttatggtgcataaggaaat-ccttatgcaccgtgcataaacatttcacaaccatca 30428935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 279
Target Start/End: Original strand, 46024053 - 46024089
Alignment:
Q  243 tccttatgcaccgtgcataaacacatcacaaccatca 279  Q
    |||||||||||||||||||||||| ||||||||||||    
T  46024053 tccttatgcaccgtgcataaacacttcacaaccatca 46024089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 243 - 282
Target Start/End: Original strand, 48690921 - 48690960
Alignment:
Q  243 tccttatgcaccgtgcataaacacatcacaaccatcaaat 282  Q
    |||||||||||||||||||||||  |||||||||||||||    
T  48690921 tccttatgcaccgtgcataaacagttcacaaccatcaaat 48690960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 317 - 356
Target Start/End: Original strand, 48692021 - 48692060
Alignment:
Q  317 ctttgggggtgtaggaagcaattatgttggaatttatgca 356  Q
    |||||| ||||||||||||||||||||||| |||||||||    
T  48692021 ctttggaggtgtaggaagcaattatgttgggatttatgca 48692060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 279
Target Start/End: Complemental strand, 46346780 - 46346719
Alignment:
Q  218 caaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatca 279  Q
    ||||||||||  | |||||||||||| |||||||| | || |||||||| ||||||||||||    
T  46346780 caaaagttattatgcataagtcattttcttatgcatcctgtataaacacttcacaaccatca 46346719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 45 - 93
Target Start/End: Complemental strand, 5832372 - 5832324
Alignment:
Q  45 aacatccattaaaatcaataaaagaaatgcatattgacttgaatagtct 93  Q
    ||||||| | ||||||||| ||||| |||||||||||||| ||||||||    
T  5832372 aacatccgtcaaaatcaatgaaagagatgcatattgacttaaatagtct 5832324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 216 - 284
Target Start/End: Original strand, 25778837 - 25778904
Alignment:
Q  216 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaattt 284  Q
    ||||||||||||||| ||||||  | ||| |||||||| |||||||| ||| |||||||||||| ||||    
T  25778837 ggcaaaagttatggtgcataagaaaattc-ttatgcactgtgcataagcacttcacaaccatcagattt 25778904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 113; Significance: 4e-57; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 216 - 356
Target Start/End: Complemental strand, 49426123 - 49425983
Alignment:
Q  216 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttagctc 315  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||  |||| ||||    
T  49426123 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcaaatttcttttattttgaacaaaaatggttttggctc 49426024  T
Q  316 actttgggggtgtaggaagcaattatgttggaatttatgca 356  Q
    ||||||||||||||||||||||||||||||| |||||||||    
T  49426023 actttgggggtgtaggaagcaattatgttgggatttatgca 49425983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 216 - 355
Target Start/End: Original strand, 53441320 - 53441459
Alignment:
Q  216 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttagctc 315  Q
    ||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||  |||| ||||    
T  53441320 ggcaaaagttatggtgcataagttatttccttatgcatcgtgcataaacacatcacaaccatcaaatttcttttattttgaacaaaaatggttttggctc 53441419  T
Q  316 actttgggggtgtaggaagcaattatgttggaatttatgc 355  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  53441420 actttgggggtgtaggaagcaattatgttggaatttatgc 53441459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 215 - 356
Target Start/End: Complemental strand, 15051203 - 15051062
Alignment:
Q  215 aggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttagct 314  Q
    |||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| ||||| |||    
T  15051203 aggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagatttcttttattttgaacaaaaatgattttggct 15051104  T
Q  315 cactttgggggtgtaggaagcaattatgttggaatttatgca 356  Q
    |||||||||||||||||||||||||||||| | |||||||||    
T  15051103 cactttgggggtgtaggaagcaattatgttaggatttatgca 15051062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 215 - 356
Target Start/End: Complemental strand, 35291615 - 35291474
Alignment:
Q  215 aggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttagct 314  Q
    |||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||| |||| |||    
T  35291615 aggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccataagatttattttattttgaacaaaaatagttttggct 35291516  T
Q  315 cactttgggggtgtaggaagcaattatgttggaatttatgca 356  Q
    || ||||||||||||||||||||||||||||| |||||||||    
T  35291515 caatttgggggtgtaggaagcaattatgttgggatttatgca 35291474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 216 - 356
Target Start/End: Original strand, 30597699 - 30597839
Alignment:
Q  216 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttagctc 315  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| ||||| ||||    
T  30597699 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagatttcttttattttgaacaaaaatgattttggctc 30597798  T
Q  316 actttgggggtgtaggaagcaattatgttggaatttatgca 356  Q
    ||| ||||||||||||||||||||||||||| |||||||||    
T  30597799 actctgggggtgtaggaagcaattatgttgggatttatgca 30597839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 216 - 356
Target Start/End: Complemental strand, 51921331 - 51921191
Alignment:
Q  216 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttagctc 315  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||  |||| ||||    
T  51921331 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagatttcttttattttgaacaaaaatggttttggctc 51921232  T
Q  316 actttgggggtgtaggaagcaattatgttggaatttatgca 356  Q
    ||||||||||||||||||||||||||||||| |||||||||    
T  51921231 actttgggggtgtaggaagcaattatgttgggatttatgca 51921191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 215 - 356
Target Start/End: Complemental strand, 27865804 - 27865663
Alignment:
Q  215 aggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttagct 314  Q
    ||||||||||||| || |||||| ||||||| ||||||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||| |||    
T  27865804 aggcaaaagttatagtgcataagccatttccatatgcaccgtgcataaacacatcacaaccatcagatttctttcattttgaacaaaaataattttggct 27865705  T
Q  315 cactttgggggtgtaggaagcaattatgttggaatttatgca 356  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  27865704 cactttgggggtgtaggaagcaattatgttgggatttatgca 27865663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 215 - 356
Target Start/End: Original strand, 46672438 - 46672578
Alignment:
Q  215 aggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttagct 314  Q
    |||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||| |||    
T  46672438 aggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagatttattttattttgaacaaaaatagttttggct 46672537  T
Q  315 cactttgggggtgtaggaagcaattatgttggaatttatgca 356  Q
    |||||| ||||||||||||||||| ||||||| |||||||||    
T  46672538 cacttt-ggggtgtaggaagcaatcatgttgggatttatgca 46672578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 215 - 356
Target Start/End: Complemental strand, 13635792 - 13635651
Alignment:
Q  215 aggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttagct 314  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| |||||||| ||||||  ||||  ||    
T  13635792 aggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttcattttgaataaaaatggttttgact 13635693  T
Q  315 cactttgggggtgtaggaagcaattatgttggaatttatgca 356  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  13635692 cactttgggggtgtaggaagcaattatgttgggatttatgca 13635651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 216 - 345
Target Start/End: Original strand, 36011843 - 36011972
Alignment:
Q  216 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttagctc 315  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||| |||| ||||    
T  36011843 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagatttcttttattttgaacaaaaatagttttggctc 36011942  T
Q  316 actttgggggtgtaggaagcaattatgttg 345  Q
    ||||| ||||||||||||||||||||||||    
T  36011943 actttaggggtgtaggaagcaattatgttg 36011972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 216 - 356
Target Start/End: Original strand, 11785974 - 11786114
Alignment:
Q  216 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttagctc 315  Q
    ||||||||||||||| |||||  ||||||||||||||||||||||||||||||||||||||||| |||| ||| |||||||||||||||  |||| ||||    
T  11785974 ggcaaaagttatggtgcataaaccatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttcattttgaacaaaaatggttttggctc 11786073  T
Q  316 actttgggggtgtaggaagcaattatgttggaatttatgca 356  Q
    ||||| ||||||||||||||||||||||||| |||||||||    
T  11786074 acttttggggtgtaggaagcaattatgttgggatttatgca 11786114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 216 - 356
Target Start/End: Original strand, 11798141 - 11798281
Alignment:
Q  216 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttagctc 315  Q
    ||||||||||||||| |||||  ||||||||||||||||||||||||||||||||||||||||| |||| ||| |||||||||||||||  |||| ||||    
T  11798141 ggcaaaagttatggtgcataaaccatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttcattttgaacaaaaatggttttggctc 11798240  T
Q  316 actttgggggtgtaggaagcaattatgttggaatttatgca 356  Q
    ||||| ||||||||||||||||||||||||| |||||||||    
T  11798241 actttaggggtgtaggaagcaattatgttgggatttatgca 11798281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 216 - 356
Target Start/End: Complemental strand, 49492578 - 49492438
Alignment:
Q  216 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttagctc 315  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| |||||||| ||||||  ||||  |||    
T  49492578 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttcattttgaataaaaatggttttgactc 49492479  T
Q  316 actttgggggtgtaggaagcaattatgttggaatttatgca 356  Q
    ||||| || |||||||||||||||||||||| |||||||||    
T  49492478 actttaggagtgtaggaagcaattatgttgggatttatgca 49492438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 216 - 356
Target Start/End: Original strand, 1621875 - 1622016
Alignment:
Q  216 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttagctc 315  Q
    ||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| |||| ||| |||||||||||||||  ||||  ||     
T  1621875 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttaattttgaacaaaaatggttttgacta 1621974  T
Q  316 acttt-gggggtgtaggaagcaattatgttggaatttatgca 356  Q
    ||||| |||||||||||||||||||||||||| |||||||||    
T  1621975 actttggggggtgtaggaagcaattatgttgggatttatgca 1622016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 215 - 356
Target Start/End: Original strand, 55765480 - 55765621
Alignment:
Q  215 aggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttagct 314  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||| |||| ||| ||||||||||||||| |||||  ||    
T  55765480 aggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacattacaaccatcagatttctttcattttgaacaaaaatgattttgact 55765579  T
Q  315 cactttgggggtgtaggaagcaattatgttggaatttatgca 356  Q
    ||||||  |||| || ||||||||||| |||| |||||||||    
T  55765580 cactttaagggtatatgaagcaattatattgggatttatgca 55765621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 210 - 284
Target Start/End: Original strand, 10472491 - 10472565
Alignment:
Q  210 taaataggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaattt 284  Q
    |||| |||||||||||||||| ||||||||||||||||||||||||||||||||||  |||||||||||| ||||    
T  10472491 taaaaaggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacatttcacaaccatcagattt 10472565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 219 - 277
Target Start/End: Original strand, 30357810 - 30357868
Alignment:
Q  219 aaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccat 277  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||    
T  30357810 aaaagttatggttcataagtcatttccttatgcaccgtgcataaacacttcacaaccat 30357868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 211 - 295
Target Start/End: Complemental strand, 26578260 - 26578176
Alignment:
Q  211 aaataggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttg 295  Q
    |||||||||||||| ||||| |||||| |||||| ||||||| ||||||||||||| |||||||||||| |||| ||| ||||||    
T  26578260 aaataggcaaaagtcatggtgcataagccatttctttatgcatcgtgcataaacacttcacaaccatcagatttctttcattttg 26578176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 220 - 277
Target Start/End: Original strand, 38010145 - 38010202
Alignment:
Q  220 aaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccat 277  Q
    ||||||||||| ||||||||||||||||||||||| ||||||||||| ||||||||||    
T  38010145 aaagttatggtgcataagtcatttccttatgcaccatgcataaacacttcacaaccat 38010202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 218 - 295
Target Start/End: Original strand, 38244946 - 38245023
Alignment:
Q  218 caaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttg 295  Q
    ||||||||||||| |||||| ||||||||| ||||| || ||||||||| |||||||||||| |||| ||||||||||    
T  38244946 caaaagttatggtgcataagccatttccttctgcacagttcataaacacttcacaaccatcagatttcttttattttg 38245023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 219 - 279
Target Start/End: Complemental strand, 1729678 - 1729618
Alignment:
Q  219 aaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatca 279  Q
    |||||||||||| ||||||||||||| |||| |||||||||||||||| ||||||||||||    
T  1729678 aaaagttatggtgcataagtcatttctttatacaccgtgcataaacacttcacaaccatca 1729618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 216 - 284
Target Start/End: Complemental strand, 25574194 - 25574126
Alignment:
Q  216 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaattt 284  Q
    ||||||||||||  | ||||||||||||||||||||||| ||||||||||| |||||||||||| ||||    
T  25574194 ggcaaaagttattatgcataagtcatttccttatgcaccctgcataaacacttcacaaccatcagattt 25574126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 218 - 278
Target Start/End: Original strand, 24686574 - 24686634
Alignment:
Q  218 caaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatc 278  Q
    ||||||||||  | ||||||||||||||||||||||| ||||||||||| |||||||||||    
T  24686574 caaaagttattatgcataagtcatttccttatgcaccctgcataaacacttcacaaccatc 24686634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 219 - 273
Target Start/End: Original strand, 20861583 - 20861637
Alignment:
Q  219 aaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaa 273  Q
    |||||||||||| |||||| ||||||||||||| |||||||||||||| ||||||    
T  20861583 aaaagttatggtgcataagccatttccttatgcgccgtgcataaacacttcacaa 20861637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 232 - 284
Target Start/End: Original strand, 16298937 - 16298989
Alignment:
Q  232 cataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaattt 284  Q
    ||||||||||||||||||||||| ||||||| ||| |||||||||||| ||||    
T  16298937 cataagtcatttccttatgcaccctgcataatcacttcacaaccatcagattt 16298989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 317 - 356
Target Start/End: Original strand, 638965 - 639004
Alignment:
Q  317 ctttgggggtgtaggaagcaattatgttggaatttatgca 356  Q
    |||||||||||||||||||||||||||||| |||||||||    
T  638965 ctttgggggtgtaggaagcaattatgttgggatttatgca 639004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 317 - 356
Target Start/End: Original strand, 10473619 - 10473658
Alignment:
Q  317 ctttgggggtgtaggaagcaattatgttggaatttatgca 356  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  10473619 ctttgggggtgtaggaagcaattaggttggaatttatgca 10473658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 317 - 356
Target Start/End: Complemental strand, 26577334 - 26577295
Alignment:
Q  317 ctttgggggtgtaggaagcaattatgttggaatttatgca 356  Q
    ||||||||||||||||||||||||||||| ||||||||||    
T  26577334 ctttgggggtgtaggaagcaattatgttgaaatttatgca 26577295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 317 - 356
Target Start/End: Original strand, 45256866 - 45256905
Alignment:
Q  317 ctttgggggtgtaggaagcaattatgttggaatttatgca 356  Q
    |||||||||||||||||||||||||||||| |||||||||    
T  45256866 ctttgggggtgtaggaagcaattatgttgggatttatgca 45256905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 218 - 284
Target Start/End: Complemental strand, 29826669 - 29826604
Alignment:
Q  218 caaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaattt 284  Q
    ||||||||||||||||||||  | | ||||||||||||||||||| ||| |||||||||||| ||||    
T  29826669 caaaagttatggtacataaggaaat-ccttatgcaccgtgcataagcacttcacaaccatcagattt 29826604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 279
Target Start/End: Original strand, 4168384 - 4168420
Alignment:
Q  243 tccttatgcaccgtgcataaacacatcacaaccatca 279  Q
    |||||||||||||||||||||||| ||||||||||||    
T  4168384 tccttatgcaccgtgcataaacacttcacaaccatca 4168420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 279
Target Start/End: Complemental strand, 26447451 - 26447415
Alignment:
Q  243 tccttatgcaccgtgcataaacacatcacaaccatca 279  Q
    |||||||||||||||||||||||| ||||||||||||    
T  26447451 tccttatgcaccgtgcataaacacttcacaaccatca 26447415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 279
Target Start/End: Complemental strand, 36621740 - 36621704
Alignment:
Q  243 tccttatgcaccgtgcataaacacatcacaaccatca 279  Q
    |||||||||||||||||||||||| ||||||||||||    
T  36621740 tccttatgcaccgtgcataaacacttcacaaccatca 36621704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 216 - 284
Target Start/End: Original strand, 50643743 - 50643810
Alignment:
Q  216 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaattt 284  Q
    ||||||||||||||| ||||||  | | ||||||||||||||||||||||| ||| |||||||| ||||    
T  50643743 ggcaaaagttatggtgcataaggaaat-ccttatgcaccgtgcataaacacttcataaccatcagattt 50643810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 223 - 262
Target Start/End: Original strand, 805109 - 805148
Alignment:
Q  223 gttatggtacataagtcatttccttatgcaccgtgcataa 262  Q
    |||||||| |||||| ||||||||||||||||||||||||    
T  805109 gttatggtgcataagccatttccttatgcaccgtgcataa 805148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 216 - 279
Target Start/End: Original strand, 27764240 - 27764302
Alignment:
Q  216 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatca 279  Q
    ||||||||||||||| ||||||  | | ||||||||||||||||||||||| || |||||||||    
T  27764240 ggcaaaagttatggtgcataaggaaat-ccttatgcaccgtgcataaacacttcgcaaccatca 27764302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 317 - 356
Target Start/End: Original strand, 38245889 - 38245928
Alignment:
Q  317 ctttgggggtgtaggaagcaattatgttggaatttatgca 356  Q
    ||||||||||||||||| |||||||||||| |||||||||    
T  38245889 ctttgggggtgtaggaaacaattatgttgggatttatgca 38245928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 216 - 279
Target Start/End: Original strand, 45255975 - 45256037
Alignment:
Q  216 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatca 279  Q
    ||||||||||||||| ||||||  | | ||||||||||||||||||||||| ||||||| ||||    
T  45255975 ggcaaaagttatggtgcataaggaaat-ccttatgcaccgtgcataaacacttcacaactatca 45256037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 317 - 356
Target Start/End: Complemental strand, 51836400 - 51836361
Alignment:
Q  317 ctttgggggtgtaggaagcaattatgttggaatttatgca 356  Q
    |||| ||||||||||||||||||||||||| |||||||||    
T  51836400 ctttaggggtgtaggaagcaattatgttgggatttatgca 51836361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 243 - 285
Target Start/End: Complemental strand, 22181284 - 22181242
Alignment:
Q  243 tccttatgcaccgtgcataaacacatcacaaccatcaaattta 285  Q
    ||||||||||||||||||||| || |||||||||||| |||||    
T  22181284 tccttatgcaccgtgcataaaaacttcacaaccatcagattta 22181242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 318 - 356
Target Start/End: Original strand, 50644642 - 50644680
Alignment:
Q  318 tttgggggtgtaggaagcaattatgttggaatttatgca 356  Q
    ||||||||| ||||||||||||||||||| |||||||||    
T  50644642 tttgggggtataggaagcaattatgttgggatttatgca 50644680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 279
Target Start/End: Original strand, 637883 - 637916
Alignment:
Q  246 ttatgcaccgtgcataaacacatcacaaccatca 279  Q
    ||||||||||||||||||||| ||||||||||||    
T  637883 ttatgcaccgtgcataaacacttcacaaccatca 637916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 318 - 346
Target Start/End: Complemental strand, 9551654 - 9551626
Alignment:
Q  318 tttgggggtgtaggaagcaattatgttgg 346  Q
    |||||||||||||||||||||||||||||    
T  9551654 tttgggggtgtaggaagcaattatgttgg 9551626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 113; Significance: 4e-57; HSPs: 44)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 216 - 356
Target Start/End: Complemental strand, 49937003 - 49936863
Alignment:
Q  216 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttagctc 315  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||||||||||||||| ||||| ||||    
T  49937003 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttcattttgaacaaaaatgattttggctc 49936904  T
Q  316 actttgggggtgtaggaagcaattatgttggaatttatgca 356  Q
    ||||||||||||||||||||||||||||||| |||||||||    
T  49936903 actttgggggtgtaggaagcaattatgttgggatttatgca 49936863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 216 - 356
Target Start/End: Original strand, 24635926 - 24636066
Alignment:
Q  216 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttagctc 315  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||  |||| ||||    
T  24635926 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagatttcttttattttgaacaaaaatggttttggctc 24636025  T
Q  316 actttgggggtgtaggaagcaattatgttggaatttatgca 356  Q
    ||||||||||||||||||||||||||||||| |||||||||    
T  24636026 actttgggggtgtaggaagcaattatgttgggatttatgca 24636066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 216 - 356
Target Start/End: Original strand, 18618835 - 18618975
Alignment:
Q  216 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttagctc 315  Q
    ||||||||||||||| ||||| | |||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||  |||| ||||    
T  18618835 ggcaaaagttatggtgcataaattatttccttatgcaccgtgcataaacacatcacaaccatcagatttcttttattttgaacaaaaattgttttggctc 18618934  T
Q  316 actttgggggtgtaggaagcaattatgttggaatttatgca 356  Q
    ||||||||||||||||||||||||||||||| |||||||||    
T  18618935 actttgggggtgtaggaagcaattatgttgggatttatgca 18618975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 216 - 356
Target Start/End: Complemental strand, 20434788 - 20434648
Alignment:
Q  216 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttagctc 315  Q
    ||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||| | |||| ||| ||||||||||||||| ||||| ||||    
T  20434788 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccattagatttctttcattttgaacaaaaatgattttggctc 20434689  T
Q  316 actttgggggtgtaggaagcaattatgttggaatttatgca 356  Q
    ||||||||||||||||||||||||||||||| |||||||||    
T  20434688 actttgggggtgtaggaagcaattatgttgggatttatgca 20434648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 215 - 356
Target Start/End: Complemental strand, 25889095 - 25888954
Alignment:
Q  215 aggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttagct 314  Q
    |||||||||||||||| ||||||  |||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||  |||| |||    
T  25889095 aggcaaaagttatggtgcataagctatttccttatgcaccgtgcataaacacatcacaaccatcagatttcttttattttgaacaaaaatggttttggct 25888996  T
Q  315 cactttgggggtgtaggaagcaattatgttggaatttatgca 356  Q
    |||||||||||||||||||||||||||||| | |||||||||    
T  25888995 cactttgggggtgtaggaagcaattatgttaggatttatgca 25888954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 216 - 356
Target Start/End: Complemental strand, 19897826 - 19897686
Alignment:
Q  216 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttagctc 315  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||||||| ||||||||||||| |||| ||||||||||||||||||| ||||| ||||    
T  19897826 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacatatcacaaccatcagatttcttttattttgaacaaaaatgattttggctc 19897727  T
Q  316 actttgggggtgtaggaagcaattatgttggaatttatgca 356  Q
    ||||||| ||||||||||||||||||||||| |||| ||||    
T  19897726 actttggaggtgtaggaagcaattatgttgggatttctgca 19897686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 216 - 356
Target Start/End: Original strand, 43452542 - 43452682
Alignment:
Q  216 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttagctc 315  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||| |||| |||| |||||||||||||||||||  |||| ||||    
T  43452542 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaactatcagatttcttttattttgaacaaaaatggttttggctc 43452641  T
Q  316 actttgggggtgtaggaagcaattatgttggaatttatgca 356  Q
    |||||||||||||||||| |||||||||||| |||||||||    
T  43452642 actttgggggtgtaggaaacaattatgttgggatttatgca 43452682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 216 - 356
Target Start/End: Complemental strand, 48762397 - 48762257
Alignment:
Q  216 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttagctc 315  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||| | |||| |||||||||||||||||||  |||| ||||    
T  48762397 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccattagatttcttttattttgaacaaaaatggttttggctc 48762298  T
Q  316 actttgggggtgtaggaagcaattatgttggaatttatgca 356  Q
    ||||| ||||||||||||||||||||||||| |||||||||    
T  48762297 actttaggggtgtaggaagcaattatgttgggatttatgca 48762257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 216 - 356
Target Start/End: Original strand, 50351803 - 50351943
Alignment:
Q  216 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttagctc 315  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||| | | |||||||||||||||  || | ||||    
T  50351803 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagatttctatcattttgaacaaaaatggttatggctc 50351902  T
Q  316 actttgggggtgtaggaagcaattatgttggaatttatgca 356  Q
    ||||||||||||||||||||||||||||||| |||||||||    
T  50351903 actttgggggtgtaggaagcaattatgttgggatttatgca 50351943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 215 - 356
Target Start/End: Original strand, 16975953 - 16976095
Alignment:
Q  215 aggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaac-aaaaataattttagc 313  Q
    |||||||||||||||| ||||||| |||||||||||||||||| ||||||||||||||||||||| |||| ||||||||||||| ||||||  |||| ||    
T  16975953 aggcaaaagttatggttcataagttatttccttatgcaccgtgtataaacacatcacaaccatcagatttcttttattttgaacaaaaaatggttttggc 16976052  T
Q  314 tcactttgggggtgtaggaagcaattatgttggaatttatgca 356  Q
    ||||||||||||||||||||||||||||||| | |||||||||    
T  16976053 tcactttgggggtgtaggaagcaattatgttaggatttatgca 16976095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 216 - 353
Target Start/End: Original strand, 6314115 - 6314253
Alignment:
Q  216 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaac-aaaaataattttagct 314  Q
    ||||||||||||||| |||||| |||||||||||||||||||||||||||||||||| ||||||||||| ||| ||||||||| ||||||  |||| |||    
T  6314115 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacagccatcaaatttctttcattttgaacaaaaaatggttttggct 6314214  T
Q  315 cactttgggggtgtaggaagcaattatgttggaatttat 353  Q
    |||||||||| ||||||||||||||||||||| ||||||    
T  6314215 cactttggggatgtaggaagcaattatgttgggatttat 6314253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 216 - 319
Target Start/End: Original strand, 28375464 - 28375567
Alignment:
Q  216 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttagctc 315  Q
    ||||||||||||||| ||||||| ||||| |||||||||||||||||||||||||||||||||| |||| ||||||||| |||||||||| ||||  |||    
T  28375464 ggcaaaagttatggtgcataagttatttctttatgcaccgtgcataaacacatcacaaccatcagattttttttattttaaacaaaaatagttttgactc 28375563  T
Q  316 actt 319  Q
    ||||    
T  28375564 actt 28375567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 216 - 295
Target Start/End: Complemental strand, 4097974 - 4097895
Alignment:
Q  216 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttg 295  Q
    ||||||||||||||| ||||||  ||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||    
T  4097974 ggcaaaagttatggtgcataagctatttccttatgcaccgtgcataaacacttcacaaccatcaaatttctttcattttg 4097895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 216 - 293
Target Start/End: Original strand, 11421594 - 11421671
Alignment:
Q  216 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattt 293  Q
    ||||||||||||||| ||||| ||||||||||||||||||||||||||||| |||||||||||| |||| ||| ||||    
T  11421594 ggcaaaagttatggtgcataaatcatttccttatgcaccgtgcataaacacttcacaaccatcagatttctttcattt 11421671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 219 - 295
Target Start/End: Complemental strand, 23175585 - 23175509
Alignment:
Q  219 aaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttg 295  Q
    |||||||||||| |||||| ||||||||||||| |||||||||||||| ||||||||||||||||| ||| ||||||    
T  23175585 aaaagttatggtgcataagccatttccttatgcgccgtgcataaacacttcacaaccatcaaatttctttcattttg 23175509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 216 - 295
Target Start/End: Original strand, 34369660 - 34369739
Alignment:
Q  216 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttg 295  Q
    ||||||| ||||||| |||||| ||||| |||||||||||||||||||||| |||||||||||| |||| ||| ||||||    
T  34369660 ggcaaaaattatggtgcataagccattttcttatgcaccgtgcataaacacttcacaaccatcagatttctttcattttg 34369739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 219 - 277
Target Start/End: Complemental strand, 21256835 - 21256777
Alignment:
Q  219 aaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccat 277  Q
    |||||||||||| |||||| ||||| |||||||||||||||||||||| ||||||||||    
T  21256835 aaaagttatggtgcataagccattttcttatgcaccgtgcataaacacttcacaaccat 21256777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 232 - 284
Target Start/End: Original strand, 33097421 - 33097473
Alignment:
Q  232 cataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaattt 284  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||||| ||||    
T  33097421 cataagtcatttccttatgcaccctgcataaacacttcacaaccatcagattt 33097473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 317 - 356
Target Start/End: Original strand, 11422541 - 11422580
Alignment:
Q  317 ctttgggggtgtaggaagcaattatgttggaatttatgca 356  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  11422541 ctttgggggtgtaggaagcaattatgttggaatttatgca 11422580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 216 - 279
Target Start/End: Original strand, 37639341 - 37639404
Alignment:
Q  216 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatca 279  Q
    ||||||||||||  | |||||| |||||||||||||||| ||||||||||| ||||||||||||    
T  37639341 ggcaaaagttattatgcataagacatttccttatgcaccctgcataaacacttcacaaccatca 37639404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 234 - 285
Target Start/End: Original strand, 44260536 - 44260587
Alignment:
Q  234 taagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaattta 285  Q
    ||||||||||||||||||||| ||||||||||| |||||||||||| |||||    
T  44260536 taagtcatttccttatgcaccctgcataaacacttcacaaccatcagattta 44260587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 232 - 279
Target Start/End: Complemental strand, 51801783 - 51801736
Alignment:
Q  232 cataagtcatttccttatgcaccgtgcataaacacatcacaaccatca 279  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||||    
T  51801783 cataagtcatttccttatgcaccctgcataaacacttcacaaccatca 51801736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 232 - 284
Target Start/End: Complemental strand, 31529715 - 31529663
Alignment:
Q  232 cataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaattt 284  Q
    |||||| |||||||||||||||| ||||||||||| |||||||||||| ||||    
T  31529715 cataagccatttccttatgcaccatgcataaacacttcacaaccatcagattt 31529663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 215 - 279
Target Start/End: Complemental strand, 35198248 - 35198184
Alignment:
Q  215 aggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatca 279  Q
    |||||||||||||  | |||||| |||||||||||||||| ||||||||||| ||||| ||||||    
T  35198248 aggcaaaagttattatgcataagacatttccttatgcaccctgcataaacacttcacagccatca 35198184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 232 - 284
Target Start/End: Complemental strand, 44688660 - 44688608
Alignment:
Q  232 cataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaattt 284  Q
    ||||||||||||||||||||||  ||||||||||| |||||||||||| ||||    
T  44688660 cataagtcatttccttatgcacgctgcataaacacttcacaaccatcagattt 44688608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 243 - 282
Target Start/End: Original strand, 16115877 - 16115916
Alignment:
Q  243 tccttatgcaccgtgcataaacacatcacaaccatcaaat 282  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  16115877 tccttatgcaccgtgcataaacacttcacaaccatcaaat 16115916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 216 - 279
Target Start/End: Original strand, 18056784 - 18056846
Alignment:
Q  216 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatca 279  Q
    ||||||||||||||| ||||||  | | ||||||||||||||||||||||| ||||||||||||    
T  18056784 ggcaaaagttatggtgcataaggaaat-ccttatgcaccgtgcataaacacttcacaaccatca 18056846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 317 - 356
Target Start/End: Complemental strand, 23174475 - 23174436
Alignment:
Q  317 ctttgggggtgtaggaagcaattatgttggaatttatgca 356  Q
    |||||||||||||||||||||||||||||| |||||||||    
T  23174475 ctttgggggtgtaggaagcaattatgttgggatttatgca 23174436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 223 - 262
Target Start/End: Complemental strand, 41033985 - 41033946
Alignment:
Q  223 gttatggtacataagtcatttccttatgcaccgtgcataa 262  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  41033985 gttatggtgcataagtcatttccttatgcaccgtgcataa 41033946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 318 - 356
Target Start/End: Original strand, 23817412 - 23817450
Alignment:
Q  318 tttgggggtgtaggaagcaattatgttggaatttatgca 356  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  23817412 tttgggggtgtaggaagcaattatgttgggatttatgca 23817450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 219 - 277
Target Start/End: Original strand, 31083365 - 31083423
Alignment:
Q  219 aaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccat 277  Q
    |||||||||||| |||||| |||||||||||| ||| | ||||||||| ||||||||||    
T  31083365 aaaagttatggtgcataagccatttccttatgtaccattcataaacacttcacaaccat 31083423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 266
Target Start/End: Original strand, 13590469 - 13590517
Alignment:
Q  218 caaaagttatggtacataagtcatttccttatgcaccgtgcataaacac 266  Q
    ||||||||||  | ||||||||||||||||||||||| |||||||||||    
T  13590469 caaaagttattatgcataagtcatttccttatgcaccctgcataaacac 13590517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 317 - 352
Target Start/End: Complemental strand, 4097182 - 4097147
Alignment:
Q  317 ctttgggggtgtaggaagcaattatgttggaattta 352  Q
    |||||||||||||||||||||||||||||| |||||    
T  4097182 ctttgggggtgtaggaagcaattatgttgggattta 4097147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 216 - 279
Target Start/End: Original strand, 22348039 - 22348101
Alignment:
Q  216 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatca 279  Q
    ||||||||||||||| ||||||  | | |||||||||||| |||||||||| ||||||||||||    
T  22348039 ggcaaaagttatggtgcataaggaaat-ccttatgcaccgcgcataaacacttcacaaccatca 22348101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 223 - 262
Target Start/End: Complemental strand, 37228403 - 37228364
Alignment:
Q  223 gttatggtacataagtcatttccttatgcaccgtgcataa 262  Q
    |||||||| |||||| ||||||||||||||||||||||||    
T  37228403 gttatggtgcataagccatttccttatgcaccgtgcataa 37228364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 317 - 347
Target Start/End: Original strand, 16116998 - 16117028
Alignment:
Q  317 ctttgggggtgtaggaagcaattatgttgga 347  Q
    |||||||||||||||||||||||||||||||    
T  16116998 ctttgggggtgtaggaagcaattatgttgga 16117028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 219 - 277
Target Start/End: Complemental strand, 20507344 - 20507286
Alignment:
Q  219 aaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccat 277  Q
    |||||||||||| |||||| ||||||||||||||  ||||||||| |  ||||||||||    
T  20507344 aaaagttatggtgcataagccatttccttatgcattgtgcataaatatttcacaaccat 20507286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 318 - 356
Target Start/End: Complemental strand, 23921043 - 23921005
Alignment:
Q  318 tttgggggtgtaggaagcaattatgttggaatttatgca 356  Q
    |||||||||||||||| |||||||||||| |||||||||    
T  23921043 tttgggggtgtaggaaacaattatgttgggatttatgca 23921005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 273
Target Start/End: Original strand, 13673907 - 13673948
Alignment:
Q  232 cataagtcatttccttatgcaccgtgcataaacacatcacaa 273  Q
    ||||||||||||||||||||||| || |||||||| ||||||    
T  13673907 cataagtcatttccttatgcaccctgtataaacacttcacaa 13673948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 273
Target Start/End: Original strand, 20372221 - 20372262
Alignment:
Q  232 cataagtcatttccttatgcaccgtgcataaacacatcacaa 273  Q
    |||||||||||| |||||||||| ||||||||||| ||||||    
T  20372221 cataagtcattttcttatgcaccctgcataaacacttcacaa 20372262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 216 - 277
Target Start/End: Original strand, 41033262 - 41033322
Alignment:
Q  216 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccat 277  Q
    ||||||||||||||| ||||||  ||||||||||||||| | |||||| | |||||||||||    
T  41033262 ggcaaaagttatggtgcataagg-atttccttatgcaccatacataaagaaatcacaaccat 41033322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 317 - 361
Target Start/End: Complemental strand, 8401475 - 8401431
Alignment:
Q  317 ctttgggggtgtaggaagcaattatgttggaatttatgcaaggta 361  Q
    |||||| |||||||||| |||||||||||| ||||||||| ||||    
T  8401475 ctttggaggtgtaggaaacaattatgttgggatttatgcacggta 8401431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 318 - 346
Target Start/End: Complemental strand, 23319107 - 23319079
Alignment:
Q  318 tttgggggtgtaggaagcaattatgttgg 346  Q
    |||||||||||||||||||||||||||||    
T  23319107 tttgggggtgtaggaagcaattatgttgg 23319079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 216 - 284
Target Start/End: Complemental strand, 28323398 - 28323330
Alignment:
Q  216 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaattt 284  Q
    ||||||||||||  | ||||||||||||  ||||||||| | |||||||||  ||||||||||| ||||    
T  28323398 ggcaaaagttattatgcataagtcatttttttatgcaccctccataaacactacacaaccatcagattt 28323330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 109; Significance: 1e-54; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 216 - 356
Target Start/End: Original strand, 41099182 - 41099322
Alignment:
Q  216 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttagctc 315  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||  |||| ||||    
T  41099182 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagatttcttttattttgaacaaaaatggttttggctc 41099281  T
Q  316 actttgggggtgtaggaagcaattatgttggaatttatgca 356  Q
    ||||||||||||||||||||||||||||||| |||||||||    
T  41099282 actttgggggtgtaggaagcaattatgttgggatttatgca 41099322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 215 - 356
Target Start/End: Original strand, 43690639 - 43690780
Alignment:
Q  215 aggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttagct 314  Q
    |||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||  |||| |||    
T  43690639 aggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagattttttttattttgaacaaaaatggttttggct 43690738  T
Q  315 cactttgggggtgtaggaagcaattatgttggaatttatgca 356  Q
    |||||||||||||||| ||||||||||||||| |||||||||    
T  43690739 cactttgggggtgtagaaagcaattatgttgggatttatgca 43690780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 216 - 356
Target Start/End: Complemental strand, 1150089 - 1149949
Alignment:
Q  216 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttagctc 315  Q
    ||||||||||||||| ||||||| ||| |||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||  |||| ||||    
T  1150089 ggcaaaagttatggtgcataagttattcccttatgcaccgtgcataaacacatcacaaccatcatatttcttttattttgaacaaaaatggttttggctc 1149990  T
Q  316 actttgggggtgtaggaagcaattatgttggaatttatgca 356  Q
    ||||||| |||||||||||||||||||||||||||||||||    
T  1149989 actttggaggtgtaggaagcaattatgttggaatttatgca 1149949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 216 - 356
Target Start/End: Original strand, 19784271 - 19784411
Alignment:
Q  216 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttagctc 315  Q
    ||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||  |||| ||||    
T  19784271 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagatttcttttattttgaacaaaaatggttttggctc 19784370  T
Q  316 actttgggggtgtaggaagcaattatgttggaatttatgca 356  Q
    |||||| |||||||||||||||||||||||| |||||||||    
T  19784371 actttgagggtgtaggaagcaattatgttgggatttatgca 19784411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 216 - 356
Target Start/End: Complemental strand, 34633387 - 34633247
Alignment:
Q  216 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttagctc 315  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||  |||| ||||    
T  34633387 ggcaaaagttatggtacataagttatttccttatgcaccgtgcataaacacatcacaaccatcagatttcttttattttgaacaaaaatggttttggctc 34633288  T
Q  316 actttgggggtgtaggaagcaattatgttggaatttatgca 356  Q
    |||||| ||||||| |||||||||||||||| |||||||||    
T  34633287 actttgagggtgtaagaagcaattatgttgggatttatgca 34633247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 215 - 353
Target Start/End: Original strand, 10237353 - 10237491
Alignment:
Q  215 aggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttagct 314  Q
    |||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||  |||| |||    
T  10237353 aggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagattttttttattttgaacaaaaatggttttggct 10237452  T
Q  315 cactttgggggtgtaggaagcaattatgttggaatttat 353  Q
    |||||||||||||||| ||||||||||||||| ||||||    
T  10237453 cactttgggggtgtagaaagcaattatgttgggatttat 10237491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 213 - 356
Target Start/End: Original strand, 41451102 - 41451245
Alignment:
Q  213 ataggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttag 312  Q
    |||||||||||||||||| |||||| |||||||||||||||||||||||||||| |||||| ||||| |||| |||||||||||||||||||  |||| |    
T  41451102 ataggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacgtcacaatcatcagatttcttttattttgaacaaaaatggttttgg 41451201  T
Q  313 ctcactttgggggtgtaggaagcaattatgttggaatttatgca 356  Q
    |||||||||| ||||||||||||||||||||||| |||||||||    
T  41451202 ctcactttggaggtgtaggaagcaattatgttgggatttatgca 41451245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 216 - 356
Target Start/End: Original strand, 7857680 - 7857820
Alignment:
Q  216 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttagctc 315  Q
    ||||||||||||||| |||||| ||||| ||||||| ||||||||||||||||||||| ||||| |||| ||| |||||||||||||||  |||| ||||    
T  7857680 ggcaaaagttatggtgcataagccattttcttatgcgccgtgcataaacacatcacaatcatcagatttttttaattttgaacaaaaatggttttggctc 7857779  T
Q  316 actttgggggtgtaggaagcaattatgttggaatttatgca 356  Q
    ||||||||||||||||||||||||||||||| |||||||||    
T  7857780 actttgggggtgtaggaagcaattatgttgggatttatgca 7857820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 213 - 356
Target Start/End: Original strand, 30413911 - 30414054
Alignment:
Q  213 ataggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttag 312  Q
    |||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| |||||||||||||||  |||||     
T  30413911 ataggcaaaagttatgctgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttaattttgaacaaaaatggttttac 30414010  T
Q  313 ctcactttgggggtgtaggaagcaattatgttggaatttatgca 356  Q
    |||||| | | | ||||||||||||||||||||| |||||||||    
T  30414011 ctcactctagagatgtaggaagcaattatgttgggatttatgca 30414054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 216 - 354
Target Start/End: Original strand, 15227030 - 15227168
Alignment:
Q  216 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttagctc 315  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||||||||||| |||||||||| |||| |||||||||||||||||||  |||| ||||    
T  15227030 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacattacaaccatcagatttcttttattttgaacaaaaatggttttggctc 15227129  T
Q  316 actttgggggtgtaggaagcaattatgttggaatttatg 354  Q
    |||||  |  ||||||||||||||||||||| |||||||    
T  15227130 actttaagaatgtaggaagcaattatgttgggatttatg 15227168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 219 - 277
Target Start/End: Original strand, 9852273 - 9852331
Alignment:
Q  219 aaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccat 277  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||    
T  9852273 aaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacttcacaaccat 9852331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 219 - 277
Target Start/End: Complemental strand, 34648191 - 34648133
Alignment:
Q  219 aaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccat 277  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||    
T  34648191 aaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacttcacaaccat 34648133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 215 - 282
Target Start/End: Complemental strand, 15260918 - 15260851
Alignment:
Q  215 aggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaat 282  Q
    |||||||||||||||| ||||||   |||||||||||||||||||||||||| |||||||||||||||    
T  15260918 aggcaaaagttatggtgcataaggattttccttatgcaccgtgcataaacacttcacaaccatcaaat 15260851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 212 - 277
Target Start/End: Original strand, 23396473 - 23396538
Alignment:
Q  212 aataggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccat 277  Q
    |||||| ||| |||||||| |||||| |||||||||||||||||||||||||||| | ||||||||    
T  23396473 aatagggaaacgttatggtgcataagccatttccttatgcaccgtgcataaacactttacaaccat 23396538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 232 - 279
Target Start/End: Complemental strand, 40247335 - 40247288
Alignment:
Q  232 cataagtcatttccttatgcaccgtgcataaacacatcacaaccatca 279  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||||    
T  40247335 cataagtcatttccttatgcaccctgcataaacacttcacaaccatca 40247288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 219 - 277
Target Start/End: Complemental strand, 35302649 - 35302591
Alignment:
Q  219 aaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccat 277  Q
    |||||||||||| |||| | ||||| |||||||||||||||||||||| ||||||||||    
T  35302649 aaaagttatggtgcataggacattttcttatgcaccgtgcataaacacttcacaaccat 35302591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 216 - 273
Target Start/End: Original strand, 2522867 - 2522924
Alignment:
Q  216 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaa 273  Q
    ||||||||||||  | ||||||||||||||||||||||| ||||||||||| ||||||    
T  2522867 ggcaaaagttattatgcataagtcatttccttatgcaccctgcataaacacttcacaa 2522924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 317 - 356
Target Start/End: Complemental strand, 4835591 - 4835552
Alignment:
Q  317 ctttgggggtgtaggaagcaattatgttggaatttatgca 356  Q
    |||||||||||||||||||||||||||||| |||||||||    
T  4835591 ctttgggggtgtaggaagcaattatgttgggatttatgca 4835552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 317 - 356
Target Start/End: Complemental strand, 4841036 - 4840997
Alignment:
Q  317 ctttgggggtgtaggaagcaattatgttggaatttatgca 356  Q
    |||||||||||||||||||||||||||||| |||||||||    
T  4841036 ctttgggggtgtaggaagcaattatgttgggatttatgca 4840997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 216 - 279
Target Start/End: Complemental strand, 32987510 - 32987448
Alignment:
Q  216 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatca 279  Q
    ||||||||||||||| ||||||  | | ||||||||||||||||||||||| ||||||||||||    
T  32987510 ggcaaaagttatggtgcataaggaaat-ccttatgcaccgtgcataaacacttcacaaccatca 32987448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 318 - 356
Target Start/End: Original strand, 1209758 - 1209796
Alignment:
Q  318 tttgggggtgtaggaagcaattatgttggaatttatgca 356  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  1209758 tttgggggtgtaggaagcaattatgttgggatttatgca 1209796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 219 - 265
Target Start/End: Complemental strand, 40023325 - 40023279
Alignment:
Q  219 aaaagttatggtacataagtcatttccttatgcaccgtgcataaaca 265  Q
    |||||||||||| |||||| ||||||||||| |||||||||||||||    
T  40023325 aaaagttatggtgcataagccatttccttatacaccgtgcataaaca 40023279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 242 - 279
Target Start/End: Original strand, 8550529 - 8550566
Alignment:
Q  242 ttccttatgcaccgtgcataaacacatcacaaccatca 279  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  8550529 ttccttatgcaccgtgcataaacacttcacaaccatca 8550566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 232 - 277
Target Start/End: Original strand, 12355438 - 12355483
Alignment:
Q  232 cataagtcatttccttatgcaccgtgcataaacacatcacaaccat 277  Q
    |||||||||||| |||||||||| ||||||||||| ||||||||||    
T  12355438 cataagtcattttcttatgcaccctgcataaacacttcacaaccat 12355483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 284
Target Start/End: Original strand, 30651973 - 30652017
Alignment:
Q  240 atttccttatgcaccgtgcataaacacatcacaaccatcaaattt 284  Q
    ||||||||||||||| ||||||||||| ||||||||| |||||||    
T  30651973 atttccttatgcaccctgcataaacacttcacaaccagcaaattt 30652017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 216 - 284
Target Start/End: Original strand, 42433701 - 42433768
Alignment:
Q  216 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaattt 284  Q
    ||||||||||||||| ||||||  | | ||||||||||||||||||| ||| |||||||||||| ||||    
T  42433701 ggcaaaagttatggtgcataaggaaat-ccttatgcaccgtgcataagcacttcacaaccatcagattt 42433768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 216 - 279
Target Start/End: Original strand, 39021975 - 39022037
Alignment:
Q  216 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatca 279  Q
    ||||||||||||||| ||||||  | | ||||||||||||||||||||||| |||||| |||||    
T  39021975 ggcaaaagttatggtgcataaggaaat-ccttatgcaccgtgcataaacacttcacaatcatca 39022037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 317 - 356
Target Start/End: Complemental strand, 39657781 - 39657742
Alignment:
Q  317 ctttgggggtgtaggaagcaattatgttggaatttatgca 356  Q
    |||| ||||||||||||||||||||||||| |||||||||    
T  39657781 ctttaggggtgtaggaagcaattatgttgggatttatgca 39657742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 318 - 356
Target Start/End: Original strand, 2751207 - 2751245
Alignment:
Q  318 tttgggggtgtaggaagcaattatgttggaatttatgca 356  Q
    ||||||||||||||||||||||||||||| ||| |||||    
T  2751207 tttgggggtgtaggaagcaattatgttgggattcatgca 2751245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 245 - 279
Target Start/End: Complemental strand, 4836738 - 4836704
Alignment:
Q  245 cttatgcaccgtgcataaacacatcacaaccatca 279  Q
    |||||||||||||||||||||| ||||||||||||    
T  4836738 cttatgcaccgtgcataaacacttcacaaccatca 4836704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 245 - 279
Target Start/End: Complemental strand, 4842183 - 4842149
Alignment:
Q  245 cttatgcaccgtgcataaacacatcacaaccatca 279  Q
    |||||||||||||||||||||| ||||||||||||    
T  4842183 cttatgcaccgtgcataaacacttcacaaccatca 4842149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 216 - 278
Target Start/End: Original strand, 7058114 - 7058175
Alignment:
Q  216 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatc 278  Q
    ||||||||||||||| ||||||  | | | ||||||||||||||||||||| |||||||||||    
T  7058114 ggcaaaagttatggtgcataaggaaatac-ttatgcaccgtgcataaacacttcacaaccatc 7058175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 216 - 262
Target Start/End: Original strand, 18022053 - 18022099
Alignment:
Q  216 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataa 262  Q
    ||||||||||||||| |||||||| || ||||||||||| |||||||    
T  18022053 ggcaaaagttatggtgcataagtccttcccttatgcaccctgcataa 18022099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 30 - 84
Target Start/End: Complemental strand, 34898149 - 34898095
Alignment:
Q  30 aatatgtcttttataaacatccattaaaatcaataaaagaaatgcatattgactt 84  Q
    ||||| |||||  ||||||||||| |||| |||||||||| ||||||||||||||    
T  34898149 aatatttctttagtaaacatccatcaaaaccaataaaagacatgcatattgactt 34898095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 216 - 278
Target Start/End: Complemental strand, 40012247 - 40012186
Alignment:
Q  216 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatc 278  Q
    ||||||||||||||| ||||||  ||||||||||||||| |||||||| || | |||||||||    
T  40012247 ggcaaaagttatggtgcataagg-atttccttatgcaccatgcataaagactttacaaccatc 40012186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 216 - 277
Target Start/End: Original strand, 1208709 - 1208769
Alignment:
Q  216 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccat 277  Q
    ||||||||||||||| ||||||  | | ||||||||||||||||||||||| | ||||||||    
T  1208709 ggcaaaagttatggtgcataaggaaat-ccttatgcaccgtgcataaacactttacaaccat 1208769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 243 - 279
Target Start/End: Original strand, 7614094 - 7614130
Alignment:
Q  243 tccttatgcaccgtgcataaacacatcacaaccatca 279  Q
    |||||||||||| ||||||||||| ||||||||||||    
T  7614094 tccttatgcaccatgcataaacacttcacaaccatca 7614130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 232 - 284
Target Start/End: Complemental strand, 13526721 - 13526669
Alignment:
Q  232 cataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaattt 284  Q
    |||||| |||||||||||| ||  ||||||||||| |||||||||||| ||||    
T  13526721 cataagccatttccttatgtactctgcataaacacttcacaaccatcagattt 13526669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 232 - 284
Target Start/End: Complemental strand, 13616256 - 13616204
Alignment:
Q  232 cataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaattt 284  Q
    |||||| |||||||||||| ||  ||||||||||| |||||||||||| ||||    
T  13616256 cataagccatttccttatgtactctgcataaacacttcacaaccatcagattt 13616204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 109; Significance: 1e-54; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 216 - 356
Target Start/End: Original strand, 8149831 - 8149971
Alignment:
Q  216 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttagctc 315  Q
    ||||||||||||||| |||||| |||||||||||||| |||||||||||||||||||||||||| |||| ||||||||||||||||||| ||||| ||||    
T  8149831 ggcaaaagttatggtgcataagccatttccttatgcatcgtgcataaacacatcacaaccatcagatttcttttattttgaacaaaaatgattttggctc 8149930  T
Q  316 actttgggggtgtaggaagcaattatgttggaatttatgca 356  Q
    ||||||||||||||||||||||||||||||| |||||||||    
T  8149931 actttgggggtgtaggaagcaattatgttgggatttatgca 8149971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 216 - 356
Target Start/End: Original strand, 8154455 - 8154595
Alignment:
Q  216 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttagctc 315  Q
    ||||||||||||||| |||||| |||||||||||||| |||||||||||||||||||||||||| |||| ||||||||||||||||||| ||||| ||||    
T  8154455 ggcaaaagttatggtgcataagccatttccttatgcatcgtgcataaacacatcacaaccatcagatttcttttattttgaacaaaaatgattttggctc 8154554  T
Q  316 actttgggggtgtaggaagcaattatgttggaatttatgca 356  Q
    ||||||||||||||||||||||||||||||| |||||||||    
T  8154555 actttgggggtgtaggaagcaattatgttgggatttatgca 8154595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 216 - 356
Target Start/End: Original strand, 39355035 - 39355175
Alignment:
Q  216 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttagctc 315  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||| |||| ||||    
T  39355035 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagatttcttttattttgaacaaaaatagttttggctc 39355134  T
Q  316 actttgggggtgtaggaagcaattatgttggaatttatgca 356  Q
     |||||||||||||||||||||||||||||| |||||||||    
T  39355135 gctttgggggtgtaggaagcaattatgttgggatttatgca 39355175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 216 - 370
Target Start/End: Original strand, 9143585 - 9143739
Alignment:
Q  216 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttagctc 315  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| ||||| |||| |||||||||||||||||||  ||||  |||    
T  9143585 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaatcatcagatttcttttattttgaacaaaaatggttttgactc 9143684  T
Q  316 actttgggggtgtaggaagcaattatgttggaatttatgcaaggtaaccactccc 370  Q
    |||||||||||||||||||||||||||||||||||||||||   |||||||||||    
T  9143685 actttgggggtgtaggaagcaattatgttggaatttatgcaccataaccactccc 9143739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 216 - 356
Target Start/End: Complemental strand, 15016632 - 15016492
Alignment:
Q  216 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttagctc 315  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||  |||| ||||    
T  15016632 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagatttcttttattttgaacaaaaatggttttggctc 15016533  T
Q  316 actttgggggtgtaggaagcaattatgttggaatttatgca 356  Q
    ||||||||||||||||||||||||||||||  |||||||||    
T  15016532 actttgggggtgtaggaagcaattatgttgagatttatgca 15016492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 216 - 356
Target Start/End: Complemental strand, 1292245 - 1292105
Alignment:
Q  216 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttagctc 315  Q
    ||||||||||||||| ||||||| |||| |||||||||||| |||||||||||||||||||||| |||| |||||||||||||||||||  |||| ||||    
T  1292245 ggcaaaagttatggtgcataagttattttcttatgcaccgtacataaacacatcacaaccatcagatttcttttattttgaacaaaaatggtttttgctc 1292146  T
Q  316 actttgggggtgtaggaagcaattatgttggaatttatgca 356  Q
    | |||||||||||||||||||||||||||||||||||||||    
T  1292145 attttgggggtgtaggaagcaattatgttggaatttatgca 1292105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 215 - 356
Target Start/End: Complemental strand, 7487321 - 7487180
Alignment:
Q  215 aggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttagct 314  Q
    |||||||||||||||| ||||||  |||||||||||||||||||||||||||||||||||||||| |||| |||||||||||| ||||||  |||| |||    
T  7487321 aggcaaaagttatggtgcataagctatttccttatgcaccgtgcataaacacatcacaaccatcagatttcttttattttgaataaaaatggttttggct 7487222  T
Q  315 cactttgggggtgtaggaagcaattatgttggaatttatgca 356  Q
    |||||||| ||||||||||||||||||||||| |||||||||    
T  7487221 cactttggaggtgtaggaagcaattatgttgggatttatgca 7487180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 218 - 356
Target Start/End: Original strand, 34464713 - 34464851
Alignment:
Q  218 caaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttagctcac 317  Q
    ||||||||||||| ||||||| |||||||||||||||||||||||||| ||||||||||||| |||| |||||||||||||||||||  |||| ||||||    
T  34464713 caaaagttatggtgcataagttatttccttatgcaccgtgcataaacatatcacaaccatcagatttcttttattttgaacaaaaatggttttggctcac 34464812  T
Q  318 tttgggggtgtaggaagcaattatgttggaatttatgca 356  Q
    ||| ||||||||||||||||||||||| | |||||||||    
T  34464813 tttaggggtgtaggaagcaattatgtttggatttatgca 34464851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 3558673 - 3558742
Alignment:
Q  16 tgttcatccatcaaaatatgtcttttataaacatccattaaaatcaataaaagaaatgcatattgacttg 85  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  3558673 tgttcatccatcaaaatatgtcttttataaacatccattaaaatcaataaaagacatgcatattgacttg 3558742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 216 - 277
Target Start/End: Original strand, 18762867 - 18762928
Alignment:
Q  216 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccat 277  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||    
T  18762867 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccat 18762928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 216 - 295
Target Start/End: Original strand, 2263573 - 2263652
Alignment:
Q  216 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttg 295  Q
    ||||||||||||||| |||||| |||||| ||||||||||||||||||||| |||||||||||  |||||||| ||||||    
T  2263573 ggcaaaagttatggtgcataagccatttctttatgcaccgtgcataaacacttcacaaccatcgcatttatttcattttg 2263652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 218 - 287
Target Start/End: Original strand, 5098718 - 5098787
Alignment:
Q  218 caaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttatt 287  Q
    ||||||||||  | ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  5098718 caaaagttattatgcataagtcatttccttatgcaccctgcataaacacttcacaaccatcaaatttatt 5098787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 220 - 284
Target Start/End: Original strand, 39548046 - 39548110
Alignment:
Q  220 aaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaattt 284  Q
    ||||||||  ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||    
T  39548046 aaagttattatacataagtcatttccttatgcaccctgcataaacacttcacaaccatcaaattt 39548110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 164 - 215
Target Start/End: Original strand, 3558742 - 3558793
Alignment:
Q  164 gtttgggagaattaaactttgaaaatgacttctcagctcacaatcttaaata 215  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  3558742 gtttgggggaattaaactttgaaaatgacttctcagctcacaatcttaaata 3558793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 317 - 354
Target Start/End: Original strand, 2264625 - 2264662
Alignment:
Q  317 ctttgggggtgtaggaagcaattatgttggaatttatg 354  Q
    ||||||||||||||||||||||||||||||||||||||    
T  2264625 ctttgggggtgtaggaagcaattatgttggaatttatg 2264662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 317 - 356
Target Start/End: Complemental strand, 18297241 - 18297202
Alignment:
Q  317 ctttgggggtgtaggaagcaattatgttggaatttatgca 356  Q
    |||||||||||||||||||||||||||||| |||||||||    
T  18297241 ctttgggggtgtaggaagcaattatgttgggatttatgca 18297202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 216 - 279
Target Start/End: Complemental strand, 18298176 - 18298114
Alignment:
Q  216 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatca 279  Q
    ||||||||||||||| ||||||  | | ||||||||||||||||||||||| ||||||||||||    
T  18298176 ggcaaaagttatggtgcataaggaaat-ccttatgcaccgtgcataaacacttcacaaccatca 18298114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 216 - 290
Target Start/End: Complemental strand, 36637003 - 36636929
Alignment:
Q  216 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttatttta 290  Q
    ||||||||||||  | |||||||||||| |||||| ||| | ||||||||| |||||||||||| |||| |||||    
T  36637003 ggcaaaagttattatgcataagtcattttcttatgtaccctacataaacacttcacaaccatcagatttgtttta 36636929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 219 - 277
Target Start/End: Complemental strand, 41346103 - 41346045
Alignment:
Q  219 aaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccat 277  Q
    |||||||||||| |||||| ||||| ||||||||||||  |||||||| ||||||||||    
T  41346103 aaaagttatggtgcataagccattttcttatgcaccgtatataaacacttcacaaccat 41346045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 216 - 277
Target Start/End: Original strand, 25192892 - 25192952
Alignment:
Q  216 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccat 277  Q
    ||||||||||||||| ||||||  | | ||||||||||||||||||||||| ||||||||||    
T  25192892 ggcaaaagttatggtgcataaggaaat-ccttatgcaccgtgcataaacacttcacaaccat 25192952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 216 - 285
Target Start/End: Original strand, 25995286 - 25995355
Alignment:
Q  216 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaattta 285  Q
    ||||||||||||  | |||||| |||||||||||||||  |||||||| || |||||||||||| |||||    
T  25995286 ggcaaaagttattatgcataagacatttccttatgcactctgcataaatacttcacaaccatcagattta 25995355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 371 - 403
Target Start/End: Original strand, 3558785 - 3558817
Alignment:
Q  371 tcttaaataaggcacctactttatttcattcat 403  Q
    |||||||||||||||||||||||||||||||||    
T  3558785 tcttaaataaggcacctactttatttcattcat 3558817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 306 - 354
Target Start/End: Original strand, 18762927 - 18762975
Alignment:
Q  306 attttagctcactttgggggtgtaggaagcaattatgttggaatttatg 354  Q
    ||||| |||||||||||  |||||||||||||||||||||| |||||||    
T  18762927 attttggctcactttggaagtgtaggaagcaattatgttgggatttatg 18762975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 216 - 279
Target Start/End: Original strand, 20709774 - 20709836
Alignment:
Q  216 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatca 279  Q
    ||||||||||||||| ||||||  | | |||||| |||||||||||||||| ||||||||||||    
T  20709774 ggcaaaagttatggtgcataaggaaat-ccttatccaccgtgcataaacacttcacaaccatca 20709836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 223 - 262
Target Start/End: Original strand, 21155441 - 21155480
Alignment:
Q  223 gttatggtacataagtcatttccttatgcaccgtgcataa 262  Q
    |||||||| |||||| ||||||||||||||||||||||||    
T  21155441 gttatggtgcataagccatttccttatgcaccgtgcataa 21155480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 223 - 262
Target Start/End: Complemental strand, 27974330 - 27974291
Alignment:
Q  223 gttatggtacataagtcatttccttatgcaccgtgcataa 262  Q
    |||||||| |||||| ||||||||||||||||||||||||    
T  27974330 gttatggtgcataagccatttccttatgcaccgtgcataa 27974291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 223 - 262
Target Start/End: Complemental strand, 28060859 - 28060820
Alignment:
Q  223 gttatggtacataagtcatttccttatgcaccgtgcataa 262  Q
    |||||||| |||||| ||||||||||||||||||||||||    
T  28060859 gttatggtgcataagccatttccttatgcaccgtgcataa 28060820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 216 - 262
Target Start/End: Original strand, 3925578 - 3925624
Alignment:
Q  216 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataa 262  Q
    ||||||||||||||| |||||||| || ||||||||||| |||||||    
T  3925578 ggcaaaagttatggtgcataagtccttcccttatgcaccctgcataa 3925624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 232 - 278
Target Start/End: Complemental strand, 13081910 - 13081864
Alignment:
Q  232 cataagtcatttccttatgcaccgtgcataaacacatcacaaccatc 278  Q
    ||||||||||||| ||||||||| | ||||||||| |||||||||||    
T  13081910 cataagtcatttcattatgcaccctacataaacacttcacaaccatc 13081864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 273
Target Start/End: Complemental strand, 24024674 - 24024633
Alignment:
Q  232 cataagtcatttccttatgcaccgtgcataaacacatcacaa 273  Q
    ||||||||| ||||||||||||| ||||||||||| ||||||    
T  24024674 cataagtcaattccttatgcaccatgcataaacacttcacaa 24024633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 324 - 356
Target Start/End: Complemental strand, 4578625 - 4578593
Alignment:
Q  324 ggtgtaggaagcaattatgttggaatttatgca 356  Q
    ||||||||||||||||||||||| |||||||||    
T  4578625 ggtgtaggaagcaattatgttgggatttatgca 4578593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 232 - 276
Target Start/End: Complemental strand, 40853729 - 40853685
Alignment:
Q  232 cataagtcatttccttatgcaccgtgcataaacacatcacaacca 276  Q
    |||||| |||||||||||||| | ||||||||||| |||||||||    
T  40853729 cataagccatttccttatgcatcctgcataaacacttcacaacca 40853685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 107; Significance: 2e-53; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 215 - 361
Target Start/End: Original strand, 7089081 - 7089227
Alignment:
Q  215 aggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttagct 314  Q
    |||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| ||||| |||| |||||||||||||||||||  |||| |||    
T  7089081 aggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaatcatcagatttcttttattttgaacaaaaatggttttggct 7089180  T
Q  315 cactttgggggtgtaggaagcaattatgttggaatttatgcaaggta 361  Q
    |||||||||||||||||||||||||||||||| ||||||||| ||||    
T  7089181 cactttgggggtgtaggaagcaattatgttgggatttatgcacggta 7089227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 216 - 353
Target Start/End: Original strand, 31216662 - 31216799
Alignment:
Q  216 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttagctc 315  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| |||||||||||||||  |||| ||||    
T  31216662 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttcattttgaacaaaaatggttttggctc 31216761  T
Q  316 actttgggggtgtaggaagcaattatgttggaatttat 353  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  31216762 actttaggggtgtaggaagcaattatgttggaatttat 31216799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 220 - 356
Target Start/End: Original strand, 6900807 - 6900943
Alignment:
Q  220 aaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttagctcactt 319  Q
    ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||  |||| ||||||||    
T  6900807 aaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagatttcttttattttgaacaaaaatggttttggctcactt 6900906  T
Q  320 tgggggtgtaggaagcaattatgttggaatttatgca 356  Q
    ||||||||||||||||||||||||||| |||||||||    
T  6900907 tgggggtgtaggaagcaattatgttgggatttatgca 6900943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 216 - 356
Target Start/End: Original strand, 1449542 - 1449682
Alignment:
Q  216 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttagctc 315  Q
    ||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| |||| ||| |||||||||||||||  |||| ||||    
T  1449542 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttgattttgaacaaaaatggttttggctc 1449641  T
Q  316 actttgggggtgtaggaagcaattatgttggaatttatgca 356  Q
    |||||||||||||||||| |||||||||||| |||||||||    
T  1449642 actttgggggtgtaggaaacaattatgttgggatttatgca 1449682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 216 - 356
Target Start/End: Complemental strand, 1536962 - 1536822
Alignment:
Q  216 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttagctc 315  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| |||| |||||||||||| ||||||  |||| ||||    
T  1536962 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagatttcttttattttgaataaaaatggttttggctc 1536863  T
Q  316 actttgggggtgtaggaagcaattatgttggaatttatgca 356  Q
     ||||||||||||||||||||||||| |||| |||||||||    
T  1536862 gctttgggggtgtaggaagcaattatattgggatttatgca 1536822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 216 - 356
Target Start/End: Original strand, 15493174 - 15493314
Alignment:
Q  216 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttagctc 315  Q
    ||||||||||||||| |||||| |||||||||||| ||||||||||||||||||| |||||| | |||| |||||||||||||||||||  |||| ||||    
T  15493174 ggcaaaagttatggtgcataagccatttccttatgtaccgtgcataaacacatcataaccattagatttcttttattttgaacaaaaatggttttggctc 15493273  T
Q  316 actttgggggtgtaggaagcaattatgttggaatttatgca 356  Q
    ||||||||||||||||||||||||||||||| |||||||||    
T  15493274 actttgggggtgtaggaagcaattatgttgggatttatgca 15493314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 217 - 297
Target Start/End: Complemental strand, 34870151 - 34870071
Alignment:
Q  217 gcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaa 297  Q
    |||||||||||||| |||||| |||||||||||||||| || ||||||||||||||||||||| |||| ||| ||||||||    
T  34870151 gcaaaagttatggtgcataagccatttccttatgcaccatgtataaacacatcacaaccatcagatttctttcattttgaa 34870071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 219 - 277
Target Start/End: Original strand, 30908655 - 30908713
Alignment:
Q  219 aaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccat 277  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||    
T  30908655 aaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacttcacaaccat 30908713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 216 - 282
Target Start/End: Complemental strand, 33346436 - 33346371
Alignment:
Q  216 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaat 282  Q
    ||||||||||||||| ||||||  | | ||||||||||||||||||||||| |||||||||||||||    
T  33346436 ggcaaaagttatggtgcataaggaaat-ccttatgcaccgtgcataaacacttcacaaccatcaaat 33346371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 216 - 279
Target Start/End: Original strand, 35119239 - 35119297
Alignment:
Q  216 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatca 279  Q
    ||||||||||||||| ||||||||     |||||||||||||||||||||| ||||||||||||    
T  35119239 ggcaaaagttatggtgcataagtc-----cttatgcaccgtgcataaacacttcacaaccatca 35119297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 232 - 273
Target Start/End: Complemental strand, 27079980 - 27079939
Alignment:
Q  232 cataagtcatttccttatgcaccgtgcataaacacatcacaa 273  Q
    |||||||||||| |||||||||||||||||||||| ||||||    
T  27079980 cataagtcattttcttatgcaccgtgcataaacacttcacaa 27079939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 284
Target Start/End: Complemental strand, 16968073 - 16968021
Alignment:
Q  232 cataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaattt 284  Q
    |||||| ||||| |||||||||| ||||||||||| ||| |||||||||||||    
T  16968073 cataagccattttcttatgcaccctgcataaacacttcataaccatcaaattt 16968021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 296 - 356
Target Start/End: Complemental strand, 34870049 - 34869989
Alignment:
Q  296 aacaaaaataattttagctcactttgggggtgtaggaagcaattatgttggaatttatgca 356  Q
    |||||||||  |||| | ||||||||| ||||||||||||||||||||| | |||||||||    
T  34870049 aacaaaaatggttttggttcactttggaggtgtaggaagcaattatgttaggatttatgca 34869989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 219 - 274
Target Start/End: Original strand, 7764444 - 7764499
Alignment:
Q  219 aaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaac 274  Q
    |||||||||||| |||||| ||||| ||||||| ||||| |||||||| |||||||    
T  7764444 aaaagttatggtgcataagccattttcttatgcgccgtgtataaacacttcacaac 7764499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 317 - 351
Target Start/End: Complemental strand, 24736608 - 24736574
Alignment:
Q  317 ctttgggggtgtaggaagcaattatgttggaattt 351  Q
    |||||||||||||||||||||||||||||| ||||    
T  24736608 ctttgggggtgtaggaagcaattatgttgggattt 24736574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 317 - 351
Target Start/End: Complemental strand, 24736644 - 24736610
Alignment:
Q  317 ctttgggggtgtaggaagcaattatgttggaattt 351  Q
    |||||||||||||||||||||||||||||| ||||    
T  24736644 ctttgggggtgtaggaagcaattatgttgggattt 24736610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 279
Target Start/End: Original strand, 18611190 - 18611251
Alignment:
Q  218 caaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatca 279  Q
    ||||||||||  | |||||| |||||| ||||||||  ||||||||||| ||||||||||||    
T  18611190 caaaagttattatgcataagacatttctttatgcactctgcataaacacttcacaaccatca 18611251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 216 - 265
Target Start/End: Original strand, 32556344 - 32556393
Alignment:
Q  216 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaaca 265  Q
    ||||||||||||  | |||||||||||| |||||||||| ||||||||||    
T  32556344 ggcaaaagttattatgcataagtcattttcttatgcaccctgcataaaca 32556393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 321 - 361
Target Start/End: Original strand, 878365 - 878405
Alignment:
Q  321 gggggtgtaggaagcaattatgttggaatttatgcaaggta 361  Q
    |||||||||||||| ||||||||||| ||||||||| ||||    
T  878365 gggggtgtaggaagtaattatgttgggatttatgcacggta 878405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 243 - 275
Target Start/End: Complemental strand, 12394419 - 12394387
Alignment:
Q  243 tccttatgcaccgtgcataaacacatcacaacc 275  Q
    |||||||||||||||||||||||| ||||||||    
T  12394419 tccttatgcaccgtgcataaacacttcacaacc 12394387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 247 - 279
Target Start/End: Complemental strand, 24737726 - 24737694
Alignment:
Q  247 tatgcaccgtgcataaacacatcacaaccatca 279  Q
    |||||||||||||||||||| ||||||||||||    
T  24737726 tatgcaccgtgcataaacacttcacaaccatca 24737694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 243 - 279
Target Start/End: Original strand, 29157252 - 29157288
Alignment:
Q  243 tccttatgcaccgtgcataaacacatcacaaccatca 279  Q
    |||||||||||||||||||||||| | ||||||||||    
T  29157252 tccttatgcaccgtgcataaacactttacaaccatca 29157288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 107; Significance: 2e-53; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 214 - 356
Target Start/End: Complemental strand, 26662606 - 26662464
Alignment:
Q  214 taggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttagc 313  Q
    |||||||||||||| || |||||| ||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||  |||| ||    
T  26662606 taggcaaaagttattgtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagatttcttttattttgaacaaaaatggttttggc 26662507  T
Q  314 tcactttgggggtgtaggaagcaattatgttggaatttatgca 356  Q
    ||||||||||||||||||||||||||||||||| |||||||||    
T  26662506 tcactttgggggtgtaggaagcaattatgttgggatttatgca 26662464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 216 - 356
Target Start/End: Complemental strand, 3475473 - 3475333
Alignment:
Q  216 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttagctc 315  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| ||||| ||||    
T  3475473 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagatttcttttattttgaacaaaaatgattttggctc 3475374  T
Q  316 actttgggggtgtaggaagcaattatgttggaatttatgca 356  Q
    ||||||| | ||||||||||||||||||||| |||||||||    
T  3475373 actttggagatgtaggaagcaattatgttgggatttatgca 3475333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 216 - 356
Target Start/End: Complemental strand, 30947977 - 30947837
Alignment:
Q  216 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttagctc 315  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||| ||| |||||||||||||||  |||| ||||    
T  30947977 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaatcatcaaatttctttcattttgaacaaaaatggttttggctc 30947878  T
Q  316 actttgggggtgtaggaagcaattatgttggaatttatgca 356  Q
    ||||| ||||||||||||||||||||||||| |||||||||    
T  30947877 acttttggggtgtaggaagcaattatgttgggatttatgca 30947837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 216 - 356
Target Start/End: Original strand, 47335032 - 47335172
Alignment:
Q  216 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttagctc 315  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| |||| |||||||||||| |||||| ||||| ||||    
T  47335032 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagatttcttttattttgaataaaaatgattttggctc 47335131  T
Q  316 actttgggggtgtaggaagcaattatgttggaatttatgca 356  Q
    |||||||||||||||||| |||||||||||| |||||||||    
T  47335132 actttgggggtgtaggaaacaattatgttgggatttatgca 47335172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 216 - 356
Target Start/End: Complemental strand, 2941992 - 2941852
Alignment:
Q  216 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttagctc 315  Q
    ||||||||||||||| ||||||| ||||||||||| |||||||||||||||||||||||||||| |||| |||||||||||||||||||  |||| ||||    
T  2941992 ggcaaaagttatggtgcataagttatttccttatgtaccgtgcataaacacatcacaaccatcagatttcttttattttgaacaaaaatggttttggctc 2941893  T
Q  316 actttgggggtgtaggaagcaattatgttggaatttatgca 356  Q
    ||||||||||||||| ||||||||||||||| |||||||||    
T  2941892 actttgggggtgtagaaagcaattatgttgggatttatgca 2941852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 216 - 356
Target Start/End: Original strand, 9106267 - 9106407
Alignment:
Q  216 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttagctc 315  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||| |||| ||| |||||||||||||||  |||| ||||    
T  9106267 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacattacaaccatcagatttctttcattttgaacaaaaatggttttggctc 9106366  T
Q  316 actttgggggtgtaggaagcaattatgttggaatttatgca 356  Q
    |||||||||||||||||||||||||| |||| |||||||||    
T  9106367 actttgggggtgtaggaagcaattatattgggatttatgca 9106407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 216 - 356
Target Start/End: Complemental strand, 9596046 - 9595906
Alignment:
Q  216 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttagctc 315  Q
    ||||||||||||||| ||||||  |||||||||||||||||||||||||||||||||||||||| |||| |||||||||||| ||||||  |||| ||||    
T  9596046 ggcaaaagttatggtgcataagctatttccttatgcaccgtgcataaacacatcacaaccatcagatttcttttattttgaataaaaatggttttggctc 9595947  T
Q  316 actttgggggtgtaggaagcaattatgttggaatttatgca 356  Q
    ||||||||||||||||||||||||||||||| |||||||||    
T  9595946 actttgggggtgtaggaagcaattatgttgggatttatgca 9595906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 216 - 356
Target Start/End: Original strand, 19284671 - 19284811
Alignment:
Q  216 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttagctc 315  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| |||| |||||||||||| ||||||  ||||  |||    
T  19284671 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagatttcttttattttgaataaaaatggttttgactc 19284770  T
Q  316 actttgggggtgtaggaagcaattatgttggaatttatgca 356  Q
    ||||||||| ||||||||||||||||||||| |||||||||    
T  19284771 actttggggatgtaggaagcaattatgttgggatttatgca 19284811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 216 - 356
Target Start/End: Complemental strand, 46237824 - 46237684
Alignment:
Q  216 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttagctc 315  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| |||| |||||||||||| ||||||  |||| ||||    
T  46237824 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagatttcttttattttgaataaaaatggttttggctc 46237725  T
Q  316 actttgggggtgtaggaagcaattatgttggaatttatgca 356  Q
    |||||||||| ||| |||||||||||||||| |||||||||    
T  46237724 actttgggggagtatgaagcaattatgttgggatttatgca 46237684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 217 - 356
Target Start/End: Complemental strand, 33414078 - 33413939
Alignment:
Q  217 gcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttagctca 316  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| || ||||||  |||| |||||    
T  33414078 gcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagatttcttttattttaaataaaaatggttttggctca 33413979  T
Q  317 ctttgggggtgtaggaagcaattatgttggaatttatgca 356  Q
    ||||| ||||||||||||||||||| |||| |||||||||    
T  33413978 ctttgagggtgtaggaagcaattatattgggatttatgca 33413939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 216 - 356
Target Start/End: Complemental strand, 6097750 - 6097610
Alignment:
Q  216 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttagctc 315  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||||||||||||| ||| |||| |||| |||||||||||||||||||  |||| ||||    
T  6097750 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcataactatcagatttcttttattttgaacaaaaatggttttggctc 6097651  T
Q  316 actttgggggtgtaggaagcaattatgttggaatttatgca 356  Q
    |||||  |||||||||||||||||||||||| |||||||||    
T  6097650 actttaagggtgtaggaagcaattatgttgggatttatgca 6097610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 216 - 356
Target Start/End: Original strand, 54379163 - 54379302
Alignment:
Q  216 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttagctc 315  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||   ||| ||||    
T  54379163 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcatatttcttttattttgaacaaaaat-ggtttggctc 54379261  T
Q  316 actttgggggtgtaggaagcaattatgttggaatttatgca 356  Q
    || |||| ||||||||||||||||||||||| |||||||||    
T  54379262 acattggaggtgtaggaagcaattatgttgggatttatgca 54379302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 220 - 356
Target Start/End: Original strand, 26960630 - 26960766
Alignment:
Q  220 aaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttagctcactt 319  Q
    |||||||||||  |||||| ||||||||||||||||||||||||||||| |||| |||||  ||| |||||||||||||||||||  |||| ||||||||    
T  26960630 aaagttatggtgtataagttatttccttatgcaccgtgcataaacacattacaatcatcaggtttcttttattttgaacaaaaatggttttggctcactt 26960729  T
Q  320 tgggggtgtaggaagcaattatgttggaatttatgca 356  Q
    |||||||||||||||||||||| |||| |||||||||    
T  26960730 tgggggtgtaggaagcaattatattgggatttatgca 26960766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 216 - 356
Target Start/End: Original strand, 10986352 - 10986492
Alignment:
Q  216 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttagctc 315  Q
    ||||||||||||| |  |||||| ||||||||||||||||||||||||||||||| |||||||| |||| ||||||||| |||||||||  ||||  |||    
T  10986352 ggcaaaagttatgatgtataagttatttccttatgcaccgtgcataaacacatcataaccatcagatttcttttattttaaacaaaaatggttttgactc 10986451  T
Q  316 actttgggggtgtaggaagcaattatgttggaatttatgca 356  Q
    |||||| || ||||||||||||||||||||  |||||||||    
T  10986452 actttgaggatgtaggaagcaattatgttgagatttatgca 10986492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 219 - 277
Target Start/End: Complemental strand, 41192413 - 41192355
Alignment:
Q  219 aaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccat 277  Q
    |||||||||||| ||||||||||||||||||||||||| ||||||||| ||||||||||    
T  41192413 aaaagttatggtgcataagtcatttccttatgcaccgtacataaacacttcacaaccat 41192355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 219 - 277
Target Start/End: Complemental strand, 51846843 - 51846785
Alignment:
Q  219 aaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccat 277  Q
    |||||||||||| |||||| |||||||||||||||||||||||||||| ||||||||||    
T  51846843 aaaagttatggtgcataagccatttccttatgcaccgtgcataaacacttcacaaccat 51846785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 216 - 284
Target Start/End: Original strand, 47728388 - 47728456
Alignment:
Q  216 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaattt 284  Q
    ||||||||||||  | |||||||||||| |||||||||| ||||||||||| |||||||||||| ||||    
T  47728388 ggcaaaagttattatgcataagtcattttcttatgcaccctgcataaacacttcacaaccatcagattt 47728456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 216 - 284
Target Start/End: Complemental strand, 51682068 - 51682000
Alignment:
Q  216 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaattt 284  Q
    ||||||||||||  | ||||||||||||||||||||||| ||||||||||| || ||||||||| ||||    
T  51682068 ggcaaaagttattatgcataagtcatttccttatgcaccctgcataaacacttcgcaaccatcagattt 51682000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 215 - 285
Target Start/End: Complemental strand, 19385381 - 19385312
Alignment:
Q  215 aggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaattta 285  Q
    |||||||||||||||| ||||||  | | ||||||||||||||||||||||| |||||||||||| |||||    
T  19385381 aggcaaaagttatggtgcataaggaaat-ccttatgcaccgtgcataaacacttcacaaccatcagattta 19385312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 219 - 277
Target Start/End: Complemental strand, 34563410 - 34563352
Alignment:
Q  219 aaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccat 277  Q
    |||||||||||| |||||| ||||| |||||||||||||||||||||  ||||||||||    
T  34563410 aaaagttatggtgcataagccattttcttatgcaccgtgcataaacatttcacaaccat 34563352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 218 - 279
Target Start/End: Original strand, 50754008 - 50754068
Alignment:
Q  218 caaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatca 279  Q
    ||||||||||||||||||||  | | ||||||||||||||||||||||| ||||||||||||    
T  50754008 caaaagttatggtacataaggaaat-ccttatgcaccgtgcataaacacttcacaaccatca 50754068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 216 - 285
Target Start/End: Complemental strand, 51362503 - 51362435
Alignment:
Q  216 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaattta 285  Q
    ||||||||||||||| ||||||  | | ||||||||||||||||||||||| |||||||||||| |||||    
T  51362503 ggcaaaagttatggtgcataaggaaat-ccttatgcaccgtgcataaacacttcacaaccatcagattta 51362435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 317 - 356
Target Start/End: Complemental strand, 19384454 - 19384415
Alignment:
Q  317 ctttgggggtgtaggaagcaattatgttggaatttatgca 356  Q
    |||||||||||||||||||||||||||||| |||||||||    
T  19384454 ctttgggggtgtaggaagcaattatgttgggatttatgca 19384415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 216 - 275
Target Start/End: Original strand, 23755285 - 23755344
Alignment:
Q  216 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaacc 275  Q
    ||||||||||||  | |||||| |||||||||||||||| ||||||||||| ||||||||    
T  23755285 ggcaaaagttattatgcataagacatttccttatgcaccctgcataaacacttcacaacc 23755344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 218 - 273
Target Start/End: Original strand, 32232993 - 32233048
Alignment:
Q  218 caaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaa 273  Q
    ||||||||||  | ||||||||||||||||||||||| ||||||||||| ||||||    
T  32232993 caaaagttattatgcataagtcatttccttatgcaccctgcataaacacttcacaa 32233048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 317 - 356
Target Start/End: Original strand, 50755163 - 50755202
Alignment:
Q  317 ctttgggggtgtaggaagcaattatgttggaatttatgca 356  Q
    |||||||||||||||||||||||||||||| |||||||||    
T  50755163 ctttgggggtgtaggaagcaattatgttgggatttatgca 50755202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 279
Target Start/End: Complemental strand, 52987689 - 52987653
Alignment:
Q  243 tccttatgcaccgtgcataaacacatcacaaccatca 279  Q
    |||||||||||||||||||||||| ||||||||||||    
T  52987689 tccttatgcaccgtgcataaacacttcacaaccatca 52987653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 284
Target Start/End: Original strand, 53594984 - 53595036
Alignment:
Q  232 cataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaattt 284  Q
    |||||| ||||| |||||||||| ||||||||||| |||||||||||| ||||    
T  53594984 cataagccattttcttatgcaccctgcataaacacttcacaaccatcagattt 53595036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 317 - 356
Target Start/End: Complemental strand, 7044430 - 7044391
Alignment:
Q  317 ctttgggggtgtaggaagcaattatgttggaatttatgca 356  Q
    ||||||||||||| |||||||||||||| |||||||||||    
T  7044430 ctttgggggtgtaagaagcaattatgttagaatttatgca 7044391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 216 - 279
Target Start/End: Complemental strand, 7045365 - 7045303
Alignment:
Q  216 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatca 279  Q
    ||||||||||||||| ||||||  | ||| |||||||||||| |||||||| ||||||||||||    
T  7045365 ggcaaaagttatggtgcataaggaaattc-ttatgcaccgtgtataaacacttcacaaccatca 7045303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 216 - 279
Target Start/End: Original strand, 23699327 - 23699390
Alignment:
Q  216 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatca 279  Q
    ||||||||||||  | |||||| ||||| ||||| |||| ||||||||||| ||||||||||||    
T  23699327 ggcaaaagttattatgcataagacattttcttatacaccctgcataaacacttcacaaccatca 23699390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 216 - 279
Target Start/End: Original strand, 23717782 - 23717845
Alignment:
Q  216 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatca 279  Q
    ||||||||||||  | |||||| ||||| ||||| |||| ||||||||||| ||||||||||||    
T  23717782 ggcaaaagttattatgcataagacattttcttatacaccctgcataaacacttcacaaccatca 23717845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 216 - 279
Target Start/End: Original strand, 23736238 - 23736301
Alignment:
Q  216 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatca 279  Q
    ||||||||||||  | |||||| ||||| ||||| |||| ||||||||||| ||||||||||||    
T  23736238 ggcaaaagttattatgcataagacattttcttatacaccctgcataaacacttcacaaccatca 23736301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 232 - 279
Target Start/End: Complemental strand, 28300002 - 28299955
Alignment:
Q  232 cataagtcatttccttatgcaccgtgcataaacacatcacaaccatca 279  Q
    ||||||||||||||||||| ||| ||||||||||| ||||||| ||||    
T  28300002 cataagtcatttccttatgtaccatgcataaacacttcacaactatca 28299955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 216 - 262
Target Start/End: Complemental strand, 9180157 - 9180111
Alignment:
Q  216 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataa 262  Q
    ||||||||||||||| |||||||| || ||||||||||| |||||||    
T  9180157 ggcaaaagttatggtgcataagtccttcccttatgcaccctgcataa 9180111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 279
Target Start/End: Complemental strand, 16277450 - 16277417
Alignment:
Q  246 ttatgcaccgtgcataaacacatcacaaccatca 279  Q
    ||||||||||||||||||||| ||||||||||||    
T  16277450 ttatgcaccgtgcataaacacttcacaaccatca 16277417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 324 - 356
Target Start/End: Original strand, 31853164 - 31853196
Alignment:
Q  324 ggtgtaggaagcaattatgttggaatttatgca 356  Q
    ||||||||||||||||||||||| |||||||||    
T  31853164 ggtgtaggaagcaattatgttgggatttatgca 31853196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 232 - 272
Target Start/End: Complemental strand, 37319510 - 37319470
Alignment:
Q  232 cataagtcatttccttatgcaccgtgcataaacacatcaca 272  Q
    |||||||||||| |||||||||| ||||||||||| |||||    
T  37319510 cataagtcattttcttatgcaccctgcataaacacttcaca 37319470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 232 - 284
Target Start/End: Complemental strand, 39195158 - 39195106
Alignment:
Q  232 cataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaattt 284  Q
    ||||||||||||||| ||||||| ||||| ||||| | | |||||||||||||    
T  39195158 cataagtcatttcctcatgcaccctgcatgaacactttataaccatcaaattt 39195106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 318 - 346
Target Start/End: Original strand, 47729134 - 47729162
Alignment:
Q  318 tttgggggtgtaggaagcaattatgttgg 346  Q
    |||||||||||||||||||||||||||||    
T  47729134 tttgggggtgtaggaagcaattatgttgg 47729162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 105; Significance: 3e-52; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 216 - 356
Target Start/End: Original strand, 33684 - 33824
Alignment:
Q  216 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttagctc 315  Q
    ||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| |||| ||| |||||||||||||||  |||| ||||    
T  33684 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttcattttgaacaaaaatggttttggctc 33783  T
Q  316 actttgggggtgtaggaagcaattatgttggaatttatgca 356  Q
    ||||||||||||||||||||||||||||||| |||||||||    
T  33784 actttgggggtgtaggaagcaattatgttgggatttatgca 33824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 105; Significance: 3e-52; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 220 - 356
Target Start/End: Complemental strand, 14940418 - 14940282
Alignment:
Q  220 aaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttagctcactt 319  Q
    ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||  |||| ||||||||    
T  14940418 aaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagatttcttttattttgaacaaaaatggttttggctcactt 14940319  T
Q  320 tgggggtgtaggaagcaattatgttggaatttatgca 356  Q
    ||||||||||||||||||||||||||| |||||||||    
T  14940318 tgggggtgtaggaagcaattatgttgggatttatgca 14940282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 216 - 356
Target Start/End: Complemental strand, 3884101 - 3883961
Alignment:
Q  216 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttagctc 315  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| |||||||||||||||  |||| ||||    
T  3884101 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacattacaaccatcaaatttctttcattttgaacaaaaatggttttggctc 3884002  T
Q  316 actttgggggtgtaggaagcaattatgttggaatttatgca 356  Q
    ||||||| |||||||||||||||||| |||| |||||||||    
T  3884001 actttggaggtgtaggaagcaattatattgggatttatgca 3883961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 216 - 356
Target Start/End: Original strand, 14394468 - 14394608
Alignment:
Q  216 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttagctc 315  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||||| ||||||||||||||| |||| |||||||||||| ||||||  |||| ||||    
T  14394468 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaatacatcacaaccatcagatttcttttattttgaataaaaatggttttggctc 14394567  T
Q  316 actttgggggtgtaggaagcaattatgttggaatttatgca 356  Q
    ||||||||||||||||||||||||||||||| |||||||||    
T  14394568 actttgggggtgtaggaagcaattatgttgggatttatgca 14394608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 216 - 356
Target Start/End: Original strand, 15416664 - 15416804
Alignment:
Q  216 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttagctc 315  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||  |||| ||||    
T  15416664 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagatttcttttattttgaacaaaaatggttttggctc 15416763  T
Q  316 actttgggggtgtaggaagcaattatgttggaatttatgca 356  Q
    |||||||| |||||||||||||| ||||||| |||||||||    
T  15416764 actttgggagtgtaggaagcaatcatgttgggatttatgca 15416804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 216 - 356
Target Start/End: Original strand, 37456680 - 37456820
Alignment:
Q  216 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttagctc 315  Q
    ||||||||||||||| ||| || |||||||||||||||||| |||||||||||||||||||||| |||| ||| |||||||||||||||| |||| ||||    
T  37456680 ggcaaaagttatggtgcatgagccatttccttatgcaccgtacataaacacatcacaaccatcagatttctttcattttgaacaaaaatagttttggctc 37456779  T
Q  316 actttgggggtgtaggaagcaattatgttggaatttatgca 356  Q
    ||||||||||||||||||||||||||||||| |||||||||    
T  37456780 actttgggggtgtaggaagcaattatgttgggatttatgca 37456820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 216 - 356
Target Start/End: Complemental strand, 26637903 - 26637763
Alignment:
Q  216 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttagctc 315  Q
    ||||||||||||||| |||||| ||||| ||||||||||||||||||||||||||||||||||| |||| ||| |||||||||||||||  |||| ||||    
T  26637903 ggcaaaagttatggtgcataagccattttcttatgcaccgtgcataaacacatcacaaccatcagatttctttaattttgaacaaaaatggttttggctc 26637804  T
Q  316 actttgggggtgtaggaagcaattatgttggaatttatgca 356  Q
    ||||| ||||||||||||||||||||||||| |||||||||    
T  26637803 actttaggggtgtaggaagcaattatgttgggatttatgca 26637763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 216 - 341
Target Start/End: Original strand, 13552983 - 13553108
Alignment:
Q  216 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttagctc 315  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| ||||| ||||    
T  13552983 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagatttcttttattttgaacaaaaatgattttggctc 13553082  T
Q  316 actttgggggtgtaggaagcaattat 341  Q
    ||||||  ||||||||||||||||||    
T  13553083 actttgaaggtgtaggaagcaattat 13553108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 216 - 297
Target Start/End: Original strand, 30783435 - 30783516
Alignment:
Q  216 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaa 297  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| |||| ||| ||||||||    
T  30783435 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcgcaaccatcagatttctttcattttgaa 30783516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 216 - 290
Target Start/End: Original strand, 33868155 - 33868229
Alignment:
Q  216 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttatttta 290  Q
    ||||||||||||  | ||||||||||||||||||||||| ||||||||||| |||||||||||  ||||||||||    
T  33868155 ggcaaaagttattatgcataagtcatttccttatgcaccctgcataaacacttcacaaccatctgatttatttta 33868229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 216 - 284
Target Start/End: Complemental strand, 16552705 - 16552637
Alignment:
Q  216 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaattt 284  Q
    ||||||||||||  | ||||||||||||||||||||||| ||||||||||| |||||||||||| ||||    
T  16552705 ggcaaaagttattatgcataagtcatttccttatgcaccatgcataaacacttcacaaccatcatattt 16552637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 296 - 356
Target Start/End: Original strand, 30783538 - 30783597
Alignment:
Q  296 aacaaaaataattttagctcactttgggggtgtaggaagcaattatgttggaatttatgca 356  Q
    |||||||||  |||| ||||||||||||||||||||||||||||||||||| |||||||||    
T  30783538 aacaaaaatggttttggctcactttgggggtgtaggaagcaattatgttgg-atttatgca 30783597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 234 - 279
Target Start/End: Original strand, 4674978 - 4675023
Alignment:
Q  234 taagtcatttccttatgcaccgtgcataaacacatcacaaccatca 279  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||||    
T  4674978 taagtcatttccttatgcaccctgcataaacacttcacaaccatca 4675023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 218 - 279
Target Start/End: Complemental strand, 16668858 - 16668797
Alignment:
Q  218 caaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatca 279  Q
    ||||||||||  | |||||| |||||||||||||||| ||||||||||| ||||||||||||    
T  16668858 caaaagttattatgcataagacatttccttatgcaccctgcataaacacttcacaaccatca 16668797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 317 - 355
Target Start/End: Complemental strand, 28069320 - 28069282
Alignment:
Q  317 ctttgggggtgtaggaagcaattatgttggaatttatgc 355  Q
    ||||||| |||||||||||||||||||||||||||||||    
T  28069320 ctttgggtgtgtaggaagcaattatgttggaatttatgc 28069282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 218 - 279
Target Start/End: Original strand, 13362772 - 13362832
Alignment:
Q  218 caaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatca 279  Q
    ||||||||||||| ||||||  | | ||||||||||||||||||||||| ||||||||||||    
T  13362772 caaaagttatggtgcataaggaaat-ccttatgcaccgtgcataaacacttcacaaccatca 13362832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 218 - 279
Target Start/End: Complemental strand, 25017280 - 25017220
Alignment:
Q  218 caaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatca 279  Q
    ||||||||||||| ||||||  | | ||||||||||||||||||||||| ||||||||||||    
T  25017280 caaaagttatggtgcataaggaaat-ccttatgcaccgtgcataaacacttcacaaccatca 25017220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 279
Target Start/End: Complemental strand, 28070219 - 28070156
Alignment:
Q  215 aggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatca 279  Q
    |||||||||||||||| ||||||  | | ||||||||||||||||||||||| ||||||| ||||    
T  28070219 aggcaaaagttatggtgcataaggaaat-ccttatgcaccgtgcataaacacttcacaactatca 28070156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 279
Target Start/End: Original strand, 34329126 - 34329189
Alignment:
Q  215 aggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatca 279  Q
    |||||||||||||||| ||||||  | | | ||||||||||||||||||||| ||||||||||||    
T  34329126 aggcaaaagttatggtgcataaggaaat-ctttatgcaccgtgcataaacacttcacaaccatca 34329189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 317 - 356
Target Start/End: Original strand, 34330157 - 34330196
Alignment:
Q  317 ctttgggggtgtaggaagcaattatgttggaatttatgca 356  Q
    |||||||| |||| ||||||||||||||||||||||||||    
T  34330157 ctttggggatgtatgaagcaattatgttggaatttatgca 34330196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 317 - 346
Target Start/End: Complemental strand, 2826127 - 2826098
Alignment:
Q  317 ctttgggggtgtaggaagcaattatgttgg 346  Q
    ||||||||||||||||||||||||||||||    
T  2826127 ctttgggggtgtaggaagcaattatgttgg 2826098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 317 - 346
Target Start/End: Complemental strand, 16667751 - 16667722
Alignment:
Q  317 ctttgggggtgtaggaagcaattatgttgg 346  Q
    ||||||||||||||||||||||||||||||    
T  16667751 ctttgggggtgtaggaagcaattatgttgg 16667722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 279
Target Start/End: Complemental strand, 18465620 - 18465559
Alignment:
Q  218 caaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatca 279  Q
    ||||||||||  | |||||| |||||| ||||||| | ||||||||||| ||||||||||||    
T  18465620 caaaagttattatgcataagacatttcattatgcatcctgcataaacacttcacaaccatca 18465559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 243 - 279
Target Start/End: Original strand, 42512225 - 42512261
Alignment:
Q  243 tccttatgcaccgtgcataaacacatcacaaccatca 279  Q
    ||||||| |||||||||||||||| ||||||||||||    
T  42512225 tccttatccaccgtgcataaacacttcacaaccatca 42512261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0581 (Bit Score: 101; Significance: 6e-50; HSPs: 1)
Name: scaffold0581
Description:

Target: scaffold0581; HSP #1
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 216 - 356
Target Start/End: Complemental strand, 8487 - 8347
Alignment:
Q  216 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttagctc 315  Q
    ||||||||||||||| |||||| ||||||||||||||| ||||||||||||||||||||||||| |||| |||||||||||||||||||| |||| ||||    
T  8487 ggcaaaagttatggtgcataagccatttccttatgcactgtgcataaacacatcacaaccatcagatttcttttattttgaacaaaaatagttttggctc 8388  T
Q  316 actttgggggtgtaggaagcaattatgttggaatttatgca 356  Q
    |||||| |||||||| ||||||||||||||| |||||||||    
T  8387 actttgagggtgtagaaagcaattatgttgggatttatgca 8347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 98; Significance: 4e-48; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 211 - 356
Target Start/End: Original strand, 24269 - 24414
Alignment:
Q  211 aaataggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataatttt 310  Q
    |||| ||||||||||||||| |||||| |||||||||||| |||||||||||||||||||||||||| |||||| ||| |||||||||||||||  ||||    
T  24269 aaatcggcaaaagttatggtgcataagccatttccttatgtaccgtgcataaacacatcacaaccattaaatttctttgattttgaacaaaaatggtttt 24368  T
Q  311 agctcactttgggggtgtaggaagcaattatgttggaatttatgca 356  Q
     | ||||||||||||||||||||||||||||||||| |||||||||    
T  24369 ggttcactttgggggtgtaggaagcaattatgttgggatttatgca 24414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0571 (Bit Score: 62; Significance: 1e-26; HSPs: 2)
Name: scaffold0571
Description:

Target: scaffold0571; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 216 - 297
Target Start/End: Complemental strand, 742 - 661
Alignment:
Q  216 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaa 297  Q
    ||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| |||| ||| ||||||||    
T  742 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttcattttgaa 661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0571; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 296 - 356
Target Start/End: Complemental strand, 639 - 579
Alignment:
Q  296 aacaaaaataattttagctcactttgggggtgtaggaagcaattatgttggaatttatgca 356  Q
    |||||||||  |||| |||||||||||||||||||||||||||||| |||| |||||||||    
T  639 aacaaaaatggttttggctcactttgggggtgtaggaagcaattatattgggatttatgca 579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0238 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 216 - 285
Target Start/End: Complemental strand, 25297 - 25229
Alignment:
Q  216 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaattta 285  Q
    ||||||||||||||| ||||||  | | ||||||||||||||||||||||| |||||||||||| |||||    
T  25297 ggcaaaagttatggtgcataaggaaat-ccttatgcaccgtgcataaacacttcacaaccatcagattta 25229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 317 - 356
Target Start/End: Original strand, 6484 - 6523
Alignment:
Q  317 ctttgggggtgtaggaagcaattatgttggaatttatgca 356  Q
    |||||||||||||||||||||||||||||| |||||||||    
T  6484 ctttgggggtgtaggaagcaattatgttgggatttatgca 6523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0460 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 232 - 273
Target Start/End: Original strand, 1620 - 1661
Alignment:
Q  232 cataagtcatttccttatgcaccgtgcataaacacatcacaa 273  Q
    ||||||||||||||||||||||| ||||||||||| ||||||    
T  1620 cataagtcatttccttatgcaccctgcataaacacttcacaa 1661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 216 - 273
Target Start/End: Original strand, 119202 - 119259
Alignment:
Q  216 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaa 273  Q
    ||||||||||||  |||||||||||||||  |||||||| ||||||||||| ||||||    
T  119202 ggcaaaagttattatacataagtcatttctatatgcaccctgcataaacacttcacaa 119259  T

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Target: scaffold0006 (Bit Score: 34; Significance: 0.0000000006; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 216 - 273
Target Start/End: Original strand, 209326 - 209383
Alignment:
Q  216 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaa 273  Q
    ||||||||||||  | |||||||||||| |||||||||| ||||||||||| ||||||    
T  209326 ggcaaaagttattatgcataagtcattttcttatgcaccctgcataaacacttcacaa 209383  T

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Target: scaffold0006; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 273
Target Start/End: Original strand, 171521 - 171562
Alignment:
Q  232 cataagtcatttccttatgcaccgtgcataaacacatcacaa 273  Q
    ||||||||||||||||||||||| || |||||||| ||||||    
T  171521 cataagtcatttccttatgcaccctgtataaacacttcacaa 171562  T

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Target: scaffold0097 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 216 - 279
Target Start/End: Original strand, 13613 - 13675
Alignment:
Q  216 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatca 279  Q
    ||||||||||||||| ||||||  | | |||||| |||||||||||||||| ||||||||||||    
T  13613 ggcaaaagttatggtgcataaggaaat-ccttatccaccgtgcataaacacttcacaaccatca 13675  T

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Target: scaffold0544 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0544
Description:

Target: scaffold0544; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 217 - 279
Target Start/End: Complemental strand, 10739 - 10678
Alignment:
Q  217 gcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatca 279  Q
    |||||||||||||| ||||||  | | |||||| |||||||||||||||| ||||||||||||    
T  10739 gcaaaagttatggtgcataaggaaat-ccttatacaccgtgcataaacacttcacaaccatca 10678  T

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Target: scaffold0002 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 216 - 266
Target Start/End: Original strand, 450202 - 450252
Alignment:
Q  216 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacac 266  Q
    ||||||||||||  | |||||||||||||||||| |||| |||||||||||    
T  450202 ggcaaaagttattatgcataagtcatttccttatacaccttgcataaacac 450252  T

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Target: scaffold0558 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0558
Description:

Target: scaffold0558; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 278
Target Start/End: Original strand, 2448 - 2508
Alignment:
Q  217 gcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatc 278  Q
    ||||||||||||||  |||||  |||||||||||||||||||||||  | ||||||||||||    
T  2448 gcaaaagttatggtgtataagg-atttccttatgcaccgtgcataaggaaatcacaaccatc 2508  T

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Target: scaffold0558; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 278
Target Start/End: Original strand, 5860 - 5920
Alignment:
Q  217 gcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatc 278  Q
    ||||||||||||||  |||||  |||||||||||||||||||||||  | ||||||||||||    
T  5860 gcaaaagttatggtgtataagg-atttccttatgcaccgtgcataaggaaatcacaaccatc 5920  T

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Target: scaffold0069 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 273
Target Start/End: Original strand, 51375 - 51416
Alignment:
Q  232 cataagtcatttccttatgcaccgtgcataaacacatcacaa 273  Q
    |||||||||||| |||||||||| ||||||||||| ||||||    
T  51375 cataagtcattttcttatgcaccctgcataaacacttcacaa 51416  T

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Target: scaffold0189 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 216 - 284
Target Start/End: Complemental strand, 11255 - 11188
Alignment:
Q  216 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaattt 284  Q
    ||||||||||||||| ||||||  | | |||||||||| |||||||| ||| |||||||||||| ||||    
T  11255 ggcaaaagttatggtgcataaggaaat-ccttatgcactgtgcataagcacttcacaaccatcatattt 11188  T

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