View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16023_high_22 (Length: 253)
Name: NF16023_high_22
Description: NF16023
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16023_high_22 |
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Alignment Details
Target: chr4 (Bit Score: 226; Significance: 1e-125; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 226; E-Value: 1e-125
Query Start/End: Original strand, 16 - 249
Target Start/End: Original strand, 49537156 - 49537389
Alignment:
| Q |
16 |
aagaaatatgttaggagatgtcaacatcttaaatttcaattatcgatagattaatctccttaattacacgcaatacgcttggtataaaaaatatatacta |
115 |
Q |
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| T |
49537156 |
aagaaatatgttaggagatgtcaacatcttaaatttcaattatcgataaattaatctccctaattacacgcaatacgcttggtataaaaaatatatacta |
49537255 |
T |
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| Q |
116 |
atagtagtatattataatgttgtgactggtacatgtcttgttcaatgtgacatgtgaatgatgctaattaagccggtcggatatggaaatgtggggtctg |
215 |
Q |
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| T |
49537256 |
atagtagtatattataatgttgtgactggtacatgtcttgttcaatgtgacatgtgaatgatgctaattaagccggtcggatatggaaatgtggggtctg |
49537355 |
T |
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| Q |
216 |
attctgctgcagctaaatcaattggaatacacgc |
249 |
Q |
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|||||||||||||||||||||||||||||||||| |
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| T |
49537356 |
attctgctgcagctaaatcaattggaatacacgc |
49537389 |
T |
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