View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16023_low_35 (Length: 217)
Name: NF16023_low_35
Description: NF16023
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16023_low_35 |
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Alignment Details
Target: chr7 (Bit Score: 183; Significance: 4e-99; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 12 - 198
Target Start/End: Original strand, 244186 - 244372
Alignment:
| Q |
12 |
cgaagaatatagacgaaagaaagtggccccggagggatgcttttcggtgtacgttggacctcaaatgcaaaggtttgtgatcaaaactgagtatgctaat |
111 |
Q |
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| T |
244186 |
cgaagaaaatagacgaaagaaagtggccccggagggatgcttttcggtgtacgttggacctcaaatgcaaaggtttgtgatcaaaactgagtatgctaat |
244285 |
T |
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| Q |
112 |
catcctttgttcaagatgttgcttgaagaagctgaatcagaatatggttatagctgccaaggacctttggctcttccttgtaatgtt |
198 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
244286 |
catcctttgttcaagatgttgcttgaagaagctgaatcagaatatggttatagctgccaaggacctttggctcttccttgtaatgtt |
244372 |
T |
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