View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16023_low_4 (Length: 516)

Name: NF16023_low_4
Description: NF16023
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16023_low_4
NF16023_low_4
[»] chr6 (29 HSPs)
chr6 (11-497)||(16438326-16438811)
chr6 (353-497)||(31067841-31067985)
chr6 (353-494)||(14262087-14262228)
chr6 (353-492)||(7497507-7497646)
chr6 (353-497)||(4200099-4200243)
chr6 (353-497)||(31896046-31896190)
chr6 (362-497)||(31975647-31975782)
chr6 (353-497)||(34758727-34758871)
chr6 (353-497)||(1463666-1463810)
chr6 (353-497)||(6788061-6788205)
chr6 (353-491)||(2606856-2606994)
chr6 (354-491)||(3000202-3000339)
chr6 (360-497)||(30384712-30384849)
chr6 (351-482)||(10113790-10113921)
chr6 (393-467)||(28900863-28900937)
chr6 (393-482)||(31535070-31535159)
chr6 (393-482)||(31996258-31996347)
chr6 (353-497)||(34773807-34773938)
chr6 (393-477)||(8779596-8779680)
chr6 (393-477)||(13461374-13461458)
chr6 (263-350)||(14924505-14924593)
chr6 (256-350)||(12972472-12972567)
chr6 (257-350)||(9396687-9396781)
chr6 (394-482)||(21199556-21199644)
chr6 (258-328)||(30355260-30355330)
chr6 (277-350)||(26512865-26512939)
chr6 (277-350)||(26517981-26518055)
chr6 (256-329)||(1755662-1755735)
chr6 (393-469)||(7835387-7835463)
[»] chr7 (48 HSPs)
chr7 (353-497)||(44256408-44256552)
chr7 (353-497)||(510054-510198)
chr7 (353-497)||(28342719-28342863)
chr7 (353-497)||(37328315-37328459)
chr7 (353-497)||(7993565-7993709)
chr7 (353-477)||(18838818-18838942)
chr7 (353-497)||(29614448-29614592)
chr7 (361-497)||(12740786-12740922)
chr7 (353-497)||(23101699-23101843)
chr7 (353-497)||(29893380-29893524)
chr7 (353-497)||(39784515-39784659)
chr7 (360-497)||(3023349-3023486)
chr7 (353-458)||(43172115-43172220)
chr7 (369-497)||(21486119-21486247)
chr7 (353-469)||(32884179-32884295)
chr7 (353-497)||(41827736-41827880)
chr7 (354-497)||(42610579-42610722)
chr7 (360-477)||(40460387-40460504)
chr7 (360-477)||(44121606-44121723)
chr7 (353-477)||(28034521-28034645)
chr7 (353-497)||(29585922-29586066)
chr7 (353-477)||(33891907-33892031)
chr7 (353-497)||(37972530-37972674)
chr7 (361-477)||(8675747-8675864)
chr7 (353-497)||(14741387-14741531)
chr7 (353-477)||(26201805-26201929)
chr7 (353-477)||(39028495-39028619)
chr7 (351-497)||(4639869-4640015)
chr7 (351-477)||(27148804-27148930)
chr7 (393-477)||(11735205-11735289)
chr7 (414-497)||(23017014-23017097)
chr7 (353-459)||(33383082-33383188)
chr7 (393-498)||(48136880-48136985)
chr7 (351-491)||(16709394-16709532)
chr7 (351-491)||(17683630-17683768)
chr7 (393-477)||(33497108-33497192)
chr7 (415-497)||(30823108-30823190)
chr7 (434-497)||(21067869-21067932)
chr7 (394-482)||(14732305-14732393)
chr7 (264-347)||(22532734-22532818)
chr7 (258-344)||(2353335-2353421)
chr7 (393-482)||(21024067-21024156)
chr7 (254-327)||(7142028-7142101)
chr7 (256-344)||(28952033-28952122)
chr7 (264-323)||(18496505-18496564)
chr7 (264-352)||(29544459-29544548)
chr7 (420-497)||(47067185-47067262)
chr7 (256-296)||(20446171-20446210)
[»] chr1 (53 HSPs)
chr1 (353-497)||(45272976-45273120)
chr1 (352-497)||(47371570-47371715)
chr1 (353-497)||(6312985-6313129)
chr1 (353-497)||(15834679-15834823)
chr1 (353-497)||(25612501-25612645)
chr1 (353-497)||(29396079-29396223)
chr1 (353-497)||(46328395-46328539)
chr1 (353-497)||(8140878-8141022)
chr1 (354-497)||(3583551-3583694)
chr1 (353-477)||(5494763-5494887)
chr1 (353-469)||(9322181-9322297)
chr1 (353-497)||(51702004-51702148)
chr1 (354-497)||(28403941-28404084)
chr1 (353-491)||(5209369-5209507)
chr1 (353-497)||(48966486-48966630)
chr1 (353-497)||(49453055-49453200)
chr1 (353-497)||(4005049-4005193)
chr1 (363-474)||(52182318-52182429)
chr1 (360-497)||(35177205-35177343)
chr1 (353-497)||(1243301-1243445)
chr1 (353-497)||(9192006-9192150)
chr1 (353-497)||(38535791-38535935)
chr1 (353-497)||(38558009-38558153)
chr1 (353-497)||(41353403-41353547)
chr1 (353-497)||(51106874-51107018)
chr1 (353-497)||(8147299-8147443)
chr1 (393-497)||(18798901-18799005)
chr1 (353-477)||(25830914-25831038)
chr1 (353-497)||(26757597-26757741)
chr1 (351-482)||(49236976-49237107)
chr1 (353-475)||(3593237-3593350)
chr1 (364-477)||(27257873-27257986)
chr1 (361-477)||(48177107-48177224)
chr1 (393-477)||(49231456-49231540)
chr1 (354-477)||(49971610-49971734)
chr1 (364-477)||(25253486-25253599)
chr1 (393-497)||(11579095-11579199)
chr1 (393-491)||(32760100-32760198)
chr1 (393-482)||(7798522-7798611)
chr1 (364-477)||(15927292-15927405)
chr1 (353-418)||(28387141-28387206)
chr1 (267-350)||(18795124-18795208)
chr1 (264-350)||(26101997-26102084)
chr1 (414-497)||(42304495-42304578)
chr1 (393-477)||(1108374-1108458)
chr1 (414-482)||(33886870-33886938)
chr1 (414-482)||(33957312-33957380)
chr1 (267-350)||(31313494-31313579)
chr1 (256-298)||(12424056-12424097)
chr1 (272-318)||(34935303-34935349)
chr1 (256-296)||(11770137-11770177)
chr1 (414-482)||(34751582-34751650)
chr1 (362-430)||(51901943-51902011)
[»] chr8 (42 HSPs)
chr8 (350-497)||(8029836-8029983)
chr8 (353-497)||(31625718-31625862)
chr8 (353-497)||(10294986-10295130)
chr8 (353-497)||(19717521-19717665)
chr8 (354-472)||(12522528-12522646)
chr8 (353-497)||(44725438-44725582)
chr8 (353-477)||(9288161-9288285)
chr8 (353-477)||(14781799-14781923)
chr8 (353-497)||(18958374-18958518)
chr8 (363-497)||(26856525-26856659)
chr8 (361-497)||(18305623-18305759)
chr8 (361-497)||(32497959-32498095)
chr8 (353-477)||(16364116-16364240)
chr8 (353-497)||(39467165-39467309)
chr8 (353-477)||(42305271-42305395)
chr8 (352-477)||(6388141-6388266)
chr8 (353-497)||(19484176-19484320)
chr8 (393-477)||(37131302-37131386)
chr8 (353-497)||(43166323-43166467)
chr8 (360-497)||(43308155-43308292)
chr8 (363-477)||(17234685-17234799)
chr8 (404-492)||(27878635-27878723)
chr8 (404-492)||(28018816-28018904)
chr8 (393-474)||(24067107-24067188)
chr8 (393-497)||(26620341-26620445)
chr8 (354-477)||(7760770-7760893)
chr8 (394-497)||(41393958-41394061)
chr8 (404-492)||(27915579-27915667)
chr8 (404-492)||(27961998-27962086)
chr8 (267-350)||(29291714-29291798)
chr8 (393-475)||(41252165-41252247)
chr8 (393-477)||(7466771-7466855)
chr8 (264-342)||(13530201-13530280)
chr8 (264-342)||(13619740-13619819)
chr8 (268-350)||(31436423-31436506)
chr8 (402-477)||(33177863-33177938)
chr8 (414-476)||(1527921-1527983)
chr8 (256-298)||(16052418-16052460)
chr8 (363-469)||(24082183-24082289)
chr8 (425-482)||(28317082-28317139)
chr8 (256-327)||(11310316-11310387)
chr8 (445-497)||(12522429-12522481)
[»] chr5 (35 HSPs)
chr5 (353-497)||(39852780-39852924)
chr5 (353-497)||(13999742-13999886)
chr5 (361-497)||(37014272-37014408)
chr5 (353-497)||(13926341-13926485)
chr5 (353-497)||(1460794-1460938)
chr5 (353-477)||(4549926-4550050)
chr5 (353-497)||(5651183-5651327)
chr5 (353-497)||(5949522-5949665)
chr5 (353-497)||(4240114-4240258)
chr5 (364-480)||(29716804-29716920)
chr5 (354-497)||(40013353-40013496)
chr5 (353-497)||(7125161-7125305)
chr5 (351-477)||(16548861-16548987)
chr5 (353-497)||(28623163-28623307)
chr5 (354-469)||(21489862-21489977)
chr5 (364-477)||(29758678-29758790)
chr5 (363-469)||(15672705-15672811)
chr5 (393-482)||(2675085-2675174)
chr5 (360-469)||(34218437-34218546)
chr5 (414-482)||(21238770-21238838)
chr5 (414-497)||(37798116-37798199)
chr5 (256-341)||(24846193-24846279)
chr5 (396-482)||(33892853-33892939)
chr5 (267-350)||(20694583-20694667)
chr5 (267-350)||(26070418-26070501)
chr5 (256-298)||(15205577-15205618)
chr5 (256-298)||(22967983-22968025)
chr5 (420-482)||(31913526-31913588)
chr5 (272-352)||(20083414-20083494)
chr5 (264-329)||(24130595-24130660)
chr5 (393-482)||(34909593-34909682)
chr5 (445-497)||(1151939-1151991)
chr5 (254-298)||(25594833-25594877)
chr5 (393-469)||(25868800-25868876)
chr5 (256-300)||(25942073-25942117)
[»] chr3 (39 HSPs)
chr3 (353-497)||(21386480-21386624)
chr3 (353-497)||(51737335-51737479)
chr3 (353-497)||(48379558-48379702)
chr3 (353-497)||(52810766-52810910)
chr3 (352-497)||(4962727-4962872)
chr3 (360-497)||(20833312-20833449)
chr3 (353-497)||(26107737-26107881)
chr3 (353-477)||(52617640-52617764)
chr3 (362-497)||(33693226-33693361)
chr3 (355-477)||(17946638-17946760)
chr3 (361-497)||(23753037-23753173)
chr3 (353-477)||(37455255-37455379)
chr3 (353-497)||(39038498-39038642)
chr3 (361-497)||(50902957-50903093)
chr3 (354-497)||(7437567-7437710)
chr3 (353-478)||(54629259-54629384)
chr3 (353-497)||(18750051-18750195)
chr3 (361-497)||(31645909-31646045)
chr3 (353-477)||(36673820-36673944)
chr3 (353-477)||(50761768-50761892)
chr3 (353-477)||(7665552-7665676)
chr3 (353-497)||(8598620-8598764)
chr3 (353-497)||(40897539-40897683)
chr3 (353-497)||(44905503-44905647)
chr3 (354-475)||(43172889-43173010)
chr3 (353-497)||(49296077-49296221)
chr3 (353-497)||(53835923-53836067)
chr3 (353-428)||(45863231-45863306)
chr3 (393-477)||(25049872-25049956)
chr3 (396-497)||(16155168-16155269)
chr3 (365-477)||(45602433-45602545)
chr3 (393-477)||(49458359-49458443)
chr3 (256-350)||(8402638-8402733)
chr3 (393-482)||(9818575-9818664)
chr3 (393-497)||(22489480-22489584)
chr3 (353-497)||(42736268-42736412)
chr3 (268-350)||(21829220-21829303)
chr3 (267-324)||(11474789-11474846)
chr3 (420-497)||(34483746-34483823)
[»] scaffold0543 (1 HSPs)
scaffold0543 (353-497)||(10934-11078)
[»] chr4 (52 HSPs)
chr4 (353-497)||(29510064-29510208)
chr4 (353-497)||(49501180-49501324)
chr4 (353-497)||(49507245-49507389)
chr4 (353-477)||(5800374-5800498)
chr4 (353-477)||(27768474-27768598)
chr4 (353-497)||(48261488-48261632)
chr4 (363-497)||(41725533-41725667)
chr4 (353-497)||(5441812-5441956)
chr4 (351-475)||(32889855-32889979)
chr4 (353-497)||(37828077-37828221)
chr4 (353-497)||(51321266-51321410)
chr4 (353-496)||(54341552-54341695)
chr4 (353-477)||(32322476-32322600)
chr4 (353-497)||(50517163-50517298)
chr4 (364-497)||(29855937-29856070)
chr4 (353-477)||(30967010-30967134)
chr4 (353-497)||(50018602-50018746)
chr4 (364-477)||(871782-871894)
chr4 (353-477)||(23987607-23987730)
chr4 (354-477)||(28484306-28484430)
chr4 (353-477)||(49834501-49834625)
chr4 (353-497)||(54853123-54853267)
chr4 (353-477)||(23671392-23671516)
chr4 (353-477)||(55165486-55165610)
chr4 (354-469)||(33138771-33138877)
chr4 (383-497)||(29469154-29469268)
chr4 (352-497)||(46286678-46286814)
chr4 (353-497)||(8084170-8084314)
chr4 (393-482)||(26491136-26491225)
chr4 (353-497)||(32683675-32683818)
chr4 (353-428)||(37916211-37916286)
chr4 (393-497)||(42937409-42937513)
chr4 (393-482)||(6487331-6487420)
chr4 (255-350)||(22119577-22119673)
chr4 (268-329)||(10576397-10576458)
chr4 (264-347)||(17339904-17339988)
chr4 (361-477)||(24966537-24966644)
chr4 (12-108)||(39041731-39041827)
chr4 (264-329)||(46647136-46647201)
chr4 (393-482)||(51967278-51967367)
chr4 (393-469)||(46862941-46863017)
chr4 (393-482)||(9972774-9972863)
chr4 (393-482)||(26448632-26448721)
chr4 (393-482)||(54561220-54561309)
chr4 (254-344)||(21167659-21167750)
chr4 (393-477)||(56423993-56424077)
chr4 (393-482)||(8563371-8563460)
chr4 (396-440)||(2326716-2326760)
chr4 (264-324)||(9288150-9288210)
chr4 (354-390)||(12754489-12754525)
chr4 (393-461)||(14334395-14334463)
chr4 (445-477)||(37916291-37916323)
[»] scaffold0013 (1 HSPs)
scaffold0013 (353-492)||(89241-89380)
[»] scaffold0042 (1 HSPs)
scaffold0042 (353-497)||(57712-57856)
[»] chr2 (48 HSPs)
chr2 (353-497)||(7027313-7027457)
chr2 (353-497)||(6224225-6224369)
chr2 (353-497)||(25288573-25288717)
chr2 (353-497)||(28739942-28740086)
chr2 (360-497)||(28845002-28845139)
chr2 (353-497)||(18177681-18177825)
chr2 (353-477)||(26789195-26789319)
chr2 (353-475)||(10657840-10657962)
chr2 (352-497)||(31847214-31847360)
chr2 (352-477)||(15224190-15224315)
chr2 (353-497)||(13833067-13833211)
chr2 (352-497)||(18899924-18900069)
chr2 (353-497)||(33136028-33136170)
chr2 (353-497)||(379340-379484)
chr2 (353-497)||(3575251-3575395)
chr2 (354-491)||(40829596-40829735)
chr2 (353-497)||(34342199-34342343)
chr2 (364-497)||(2308710-2308843)
chr2 (393-497)||(35404315-35404419)
chr2 (393-477)||(15926379-15926463)
chr2 (353-464)||(214938-215049)
chr2 (354-418)||(3464051-3464115)
chr2 (364-475)||(3858440-3858551)
chr2 (270-339)||(24047328-24047398)
chr2 (393-482)||(13898477-13898566)
chr2 (393-482)||(14039094-14039183)
chr2 (393-482)||(19948539-19948628)
chr2 (393-477)||(32242222-32242306)
chr2 (256-319)||(18236422-18236485)
chr2 (408-475)||(18727665-18727732)
chr2 (396-482)||(11153361-11153447)
chr2 (393-482)||(3991774-3991863)
chr2 (393-482)||(38413465-38413554)
chr2 (393-477)||(1833722-1833806)
chr2 (393-477)||(32293914-32293997)
chr2 (445-497)||(38295714-38295766)
chr2 (254-324)||(19540967-19541037)
chr2 (420-497)||(43078967-43079044)
chr2 (420-497)||(43825317-43825394)
chr2 (256-328)||(21505250-21505322)
chr2 (393-477)||(33262854-33262938)
chr2 (287-329)||(32276623-32276665)
chr2 (264-305)||(22164384-22164425)
chr2 (414-471)||(24025870-24025927)
chr2 (264-305)||(39730387-39730428)
chr2 (402-438)||(5842869-5842905)
chr2 (393-469)||(12877687-12877763)
chr2 (256-328)||(28278534-28278605)
[»] scaffold1128 (1 HSPs)
scaffold1128 (351-482)||(915-1046)
[»] scaffold0110 (1 HSPs)
scaffold0110 (361-490)||(39290-39419)
[»] scaffold1504 (1 HSPs)
scaffold1504 (353-477)||(1276-1400)
[»] scaffold0573 (1 HSPs)
scaffold0573 (393-467)||(8857-8931)
[»] scaffold0190 (1 HSPs)
scaffold0190 (267-350)||(11785-11869)
[»] scaffold0421 (1 HSPs)
scaffold0421 (420-482)||(1727-1789)
[»] scaffold0347 (1 HSPs)
scaffold0347 (410-477)||(15128-15195)
[»] scaffold0246 (1 HSPs)
scaffold0246 (393-475)||(1368-1450)
[»] scaffold0383 (1 HSPs)
scaffold0383 (420-477)||(16697-16754)
[»] scaffold0152 (2 HSPs)
scaffold0152 (420-477)||(20933-20990)
scaffold0152 (420-477)||(28811-28868)
[»] scaffold0002 (1 HSPs)
scaffold0002 (256-298)||(446937-446978)


Alignment Details
Target: chr6 (Bit Score: 405; Significance: 0; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 405; E-Value: 0
Query Start/End: Original strand, 11 - 497
Target Start/End: Original strand, 16438326 - 16438811
Alignment:
Q  11 catcatcacttcaaccaaaattcaccaccacgctcaaaatcaccattaaaattcaaactcccaacccaacaacaccaaccacgacgacttgttcaacttt 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||    
T  16438326 catcatcacttcaaccaaaattcaccaccacgctcaaaatcaccattaaaattcaaacttctaacccaacaacaccaaccacgacgacttgttcaacttt 16438425  T
Q  111 gtaattcctcaaataaatgagaaagaacagaggtccgacaaactagattatgcgaaatagacactgaaactccgacatattttcgttga-gaaactgaac 209  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| |||||||| |||| ||||||||||    
T  16438426 gtaattcctcaaataaatgagaaagaacagaggtccgacaaaccagattatgcgaaatagacactaaaactccgagatattttccttgacgaaactgaac 16438525  T
Q  210 acctagtaatgatttggatccaaatacggatccaattctacaccactgatgacagagcatcatatgatattttagtctatgtttttagttactttcattg 309  Q
    ||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||| |||    
T  16438526 acccagtaatgatttggatccaaatacggatccaattctacaccgctgatgacagagcatcgtatgatattttagtctatgtttttagttactttctttg 16438625  T
Q  310 catttaaaggaaaataagagttatttagaggagttatcaatagcaatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttagg 409  Q
    ||||||||||||||||  ||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||| |||||||| ||||||||    
T  16438626 catttaaaggaaaata--agttatttagaggagttgtcaatagcaatgttccgcaaatcgagtgttaactctccgagtttatcgagtttacgtttttagg 16438723  T
Q  410 tacaaaaatcgtgttaacttggaggtaaactcgacttctggtaaaatcggaaggtttgacgagtttgatcgagatagcactcggtaaa 497  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  16438724 tacaaaaatcgtgttaacttggaggtaaactcgacttctggtaaaatcggaaggtttgacgagtttaatcgagttagcactcggtaaa 16438811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 353 - 497
Target Start/End: Original strand, 31067841 - 31067985
Alignment:
Q  353 caatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggta 452  Q
    |||||| |||||||||||||||||| |||||||| |||| ||||||||||||||||||||||||||||||||||||  |||||||| |||  ||||||||    
T  31067841 caatgttccgcaaatcgagtgttaaatctccgagattatcgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggta 31067940  T
Q  453 aaatcggaaggtttgacgagtttgatcgagatagcactcggtaaa 497  Q
    |||| ||||||||| ||||||||||  ||| || |||||||||||    
T  31067941 aaattggaaggtttaacgagtttgactgagttaacactcggtaaa 31067985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 353 - 494
Target Start/End: Complemental strand, 14262228 - 14262087
Alignment:
Q  353 caatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggta 452  Q
    |||||| ||||||||||||||||||||||||||| ||||  ||||||| |||||||||||||||||||||||||||  |||||||| |||| ||||||||    
T  14262228 caatgttccgcaaatcgagtgttaactctccgagattatctagtttacttttttaggtacaaaaatcgtgttaactctgaggtaaaatcgatttctggta 14262129  T
Q  453 aaatcggaaggtttgacgagtttgatcgagatagcactcggt 494  Q
    |||| ||||||||| ||||||||||  ||| || ||||||||    
T  14262128 aaattggaaggtttaacgagtttgactgagttaacactcggt 14262087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 353 - 492
Target Start/End: Original strand, 7497507 - 7497646
Alignment:
Q  353 caatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggta 452  Q
    |||||| ||||||||||| ||||||||||||||| ||||  ||||||| |||||||||||||||||||||||||||  ||||||||||||  ||||||||    
T  7497507 caatgttccgcaaatcgaatgttaactctccgagattatcaagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaactcggtttctggta 7497606  T
Q  453 aaatcggaaggtttgacgagtttgatcgagatagcactcg 492  Q
    |||| ||||||||| ||||||||||| ||| || ||||||    
T  7497607 aaattggaaggtttaacgagtttgattgagttaacactcg 7497646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 353 - 497
Target Start/End: Complemental strand, 4200243 - 4200099
Alignment:
Q  353 caatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggta 452  Q
    |||||| |||||||||||||||||| |||||||| |||| ||||||||||||||| ||||||||||| ||||||||  |||||||| |||  ||||||||    
T  4200243 caatgttccgcaaatcgagtgttaaatctccgagattatcgagtttacatttttaagtacaaaaatcatgttaactctgaggtaaaatcggtttctggta 4200144  T
Q  453 aaatcggaaggtttgacgagtttgatcgagatagcactcggtaaa 497  Q
    |||| ||||||||| ||||||||||  ||| || |||||||||||    
T  4200143 aaattggaaggtttaacgagtttgactgagttaacactcggtaaa 4200099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 353 - 497
Target Start/End: Original strand, 31896046 - 31896190
Alignment:
Q  353 caatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggta 452  Q
    |||||| ||| |||||||||||||| |||||||| |||| |||| |||||||||||||||||||||||||||||||  |||||||| |||  ||||||||    
T  31896046 caatgttccgtaaatcgagtgttaaatctccgagattatcgagtatacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggta 31896145  T
Q  453 aaatcggaaggtttgacgagtttgatcgagatagcactcggtaaa 497  Q
    |||| ||||||||| ||||||||||  ||| || |||||||||||    
T  31896146 aaattggaaggtttaacgagtttgactgagttaacactcggtaaa 31896190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 362 - 497
Target Start/End: Complemental strand, 31975782 - 31975647
Alignment:
Q  362 gcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggtaaaatcggaa 461  Q
    ||||||| |||||||||||||||||||||  |||||||  | ||||||||| |||||||||||||||  ||||||||||||| |||| ||||||||||||    
T  31975782 gcaaatcaagtgttaactctccgagtttactgagtttatgtgtttaggtaccaaaatcgtgttaactctgaggtaaactcgatttcttgtaaaatcggaa 31975683  T
Q  462 ggtttgacgagtttgatcgagatagcactcggtaaa 497  Q
    |||||||||||||||| |||| ||  ||||||||||    
T  31975682 ggtttgacgagtttgaccgagttaagactcggtaaa 31975647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 353 - 497
Target Start/End: Complemental strand, 34758871 - 34758727
Alignment:
Q  353 caatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggta 452  Q
    |||||| |||||||||||| |||||||||||||| ||||  ||||||| |||||||||||||||||||||||||||  |||||||| |||  ||||| ||    
T  34758871 caatgttccgcaaatcgagcgttaactctccgagattatcaagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctgata 34758772  T
Q  453 aaatcggaaggtttgacgagtttgatcgagatagcactcggtaaa 497  Q
    |||| ||||||||| || |||||||  ||| || |||||||||||    
T  34758771 aaattggaaggtttaacaagtttgactgagttaacactcggtaaa 34758727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 353 - 497
Target Start/End: Complemental strand, 1463810 - 1463666
Alignment:
Q  353 caatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggta 452  Q
    |||||| || ||||||| |||| |||||  ||||||||  |||||||| | ||||||| | |||| |||||||||| |||||||||||||| ||||||||    
T  1463810 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctggta 1463711  T
Q  453 aaatcggaaggtttgacgagtttgatcgagatagcactcggtaaa 497  Q
    ||||||||| ||||||||||||||| |||| || ||||| |||||    
T  1463710 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaa 1463666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 353 - 497
Target Start/End: Original strand, 6788061 - 6788205
Alignment:
Q  353 caatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggta 452  Q
    |||||| || ||||||| |||| |||||  ||||||||  |||||||| | ||||||| | |||| |||||||||| |||||||||||||| ||||||||    
T  6788061 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctggta 6788160  T
Q  453 aaatcggaaggtttgacgagtttgatcgagatagcactcggtaaa 497  Q
    ||||||||| ||||||||||||||| |||| || ||||| |||||    
T  6788161 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaa 6788205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 353 - 491
Target Start/End: Original strand, 2606856 - 2606994
Alignment:
Q  353 caatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggta 452  Q
    |||||| ||||||||||| ||||||||||  |||||||  |||||||| | |||||| || |||||||| ||||||  ||||||||||||| ||||||||    
T  2606856 caatgttccgcaaatcgaatgttaactctttgagtttactgagtttacgtgtttaggcaccaaaatcgttttaactctgaggtaaactcgatttctggta 2606955  T
Q  453 aaatcggaaggtttgacgagtttgatcgagatagcactc 491  Q
    ||||| |||||||||| |||||||| |||| || |||||    
T  2606956 aaatcagaaggtttgatgagtttgaccgagttaacactc 2606994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 354 - 491
Target Start/End: Original strand, 3000202 - 3000339
Alignment:
Q  354 aatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggtaa 453  Q
    ||||| || |||||| ||||||||||| |||||||||  || ||||| | ||||||||| ||||||||||||||| || |||||| |||| || ||||||    
T  3000202 aatgttccacaaatcaagtgttaactcgccgagtttactgattttacgtgtttaggtaccaaaatcgtgttaactcgggggtaaattcgatttatggtaa 3000301  T
Q  454 aatcggaaggtttgacgagtttgatcgagatagcactc 491  Q
    |||||| | |||||||||||||||||||| || |||||    
T  3000302 aatcgggaagtttgacgagtttgatcgagttaacactc 3000339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 360 - 497
Target Start/End: Complemental strand, 30384849 - 30384712
Alignment:
Q  360 ccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggtaaaatcgg 459  Q
    ||||||||||||||||||||||||||| |||  |||||||  |||||||||||||||||||||||||||   ||||||| ||   ||||| |||||| ||    
T  30384849 ccgcaaatcgagtgttaactctccgagattaccgagtttatgtttttaggtacaaaaatcgtgttaactctaaggtaaaatcagtttctgataaaattgg 30384750  T
Q  460 aaggtttgacgagtttgatcgagatagcactcggtaaa 497  Q
    ||||||| ||||||||||  ||| || |||||||||||    
T  30384749 aaggtttaacgagtttgactgagttaacactcggtaaa 30384712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 351 - 482
Target Start/End: Complemental strand, 10113921 - 10113790
Alignment:
Q  351 agcaatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctgg 450  Q
    |||||||| || ||||||| |||| |||||  ||||||||  |||||||| | ||||||| | |||| |||||||||| |||||||||||||  || |||    
T  10113921 agcaatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtcctaaaaacgtgttaactcggaggtaaactcgttttttgg 10113822  T
Q  451 taaaatcggaaggtttgacgagtttgatcgag 482  Q
    ||||||||||| ||||||||||||||| ||||    
T  10113821 taaaatcggaaagtttgacgagtttgaccgag 10113790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 393 - 467
Target Start/End: Complemental strand, 28900937 - 28900863
Alignment:
Q  393 gagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggtaaaatcggaaggtttg 467  Q
    |||||||||| ||||||||| |||||||||||||||  ||||||||||||| |||||||||||||||||||||||    
T  28900937 gagtttacatgtttaggtaccaaaatcgtgttaactctgaggtaaactcgatttctggtaaaatcggaaggtttg 28900863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 393 - 482
Target Start/End: Complemental strand, 31535159 - 31535070
Alignment:
Q  393 gagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggtaaaatcggaaggtttgacgagtttgatcgag 482  Q
    |||||||||||||||||||  ||||| |||||||||  |||| |||||||| |||||||||||||| |||||||||||||||||| ||||    
T  31535159 gagtttacatttttaggtatcaaaattgtgttaactctgaggcaaactcgatttctggtaaaatcgaaaggtttgacgagtttgaccgag 31535070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 393 - 482
Target Start/End: Complemental strand, 31996347 - 31996258
Alignment:
Q  393 gagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggtaaaatcggaaggtttgacgagtttgatcgag 482  Q
    |||||||| |||||||||   |||| |||||||||| |||||||||||||| || |||| ||||||||| ||||||||||||||| ||||    
T  31996347 gagtttacgtttttaggtggcaaaaacgtgttaactcggaggtaaactcgatttttggtgaaatcggaaagtttgacgagtttgaccgag 31996258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 353 - 497
Target Start/End: Original strand, 34773807 - 34773938
Alignment:
Q  353 caatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggta 452  Q
    |||||| |||||||||||||||||| |||||||| |||| ||||||||| |||||||||||||||||            ||||||| |||  ||||||||    
T  34773807 caatgttccgcaaatcgagtgttaaatctccgagattattgagtttaca-ttttaggtacaaaaatc------------aggtaaaatcggtttctggta 34773893  T
Q  453 aaatcggaaggtttgacgagtttgatcgagatagcactcggtaaa 497  Q
    |||| ||||||||| ||||||||||  ||| || |||||||||||    
T  34773894 aaattggaaggtttaacgagtttgactgagttaacactcggtaaa 34773938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 393 - 477
Target Start/End: Complemental strand, 8779680 - 8779596
Alignment:
Q  393 gagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggtaaaatcggaaggtttgacgagtttga 477  Q
    |||||||| |||||||||   |||| |||||||||| |||||||||||||  || |||| ||||||||| |||||||||||||||    
T  8779680 gagtttacgtttttaggtggcaaaaacgtgttaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttga 8779596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 393 - 477
Target Start/End: Original strand, 13461374 - 13461458
Alignment:
Q  393 gagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggtaaaatcggaaggtttgacgagtttga 477  Q
    |||||||| |||||| |||  |||||||||| |||| |||||||||||||  || |||||||||| ||| |||||||||||||||    
T  13461374 gagtttacgtttttatgtatcaaaatcgtgtcaactcggaggtaaactcggtttttggtaaaatcagaatgtttgacgagtttga 13461458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 263 - 350
Target Start/End: Complemental strand, 14924593 - 14924505
Alignment:
Q  263 agagcatcatatgatattttagtctatgtttttagttactttcattgcatttaaaggaaaataaga-gttatttagaggagttatcaat 350  Q
    |||||| |||||||||| |||| ||||||||||||||| |||| |||||||| |||| |||||| | || ||||||||||||| |||||    
T  14924593 agagcaccatatgatatattaggctatgtttttagttattttctttgcatttgaaggcaaataatatgtaatttagaggagttgtcaat 14924505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 256 - 350
Target Start/End: Complemental strand, 12972567 - 12972472
Alignment:
Q  256 tgatgacagagcatcatatgatattttagtctatgtttttagttactttcattgcatttaaaggaaaataaga-gttatttagaggagttatcaat 350  Q
    |||||| ||| |||||| ||||||||| | ||||||||||||||| |||| |||||||| |||| || ||||| || ||||||||||||| |||||    
T  12972567 tgatgatagaacatcatttgatatttttggctatgtttttagttattttctttgcatttgaaggcaactaagaggtcatttagaggagttgtcaat 12972472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 257 - 350
Target Start/End: Complemental strand, 9396781 - 9396687
Alignment:
Q  257 gatgacagagcatcatatgatattttagtctatgtttttagttactttcattgcatttaaaggaaaataaga-gttatttagaggagttatcaat 350  Q
    |||||| || |||||||| ||||||| | ||||||||| |||||  ||| |||||||| ||||||||||||| || |||||||||||| ||||||    
T  9396781 gatgacggaacatcatataatattttggactatgttttaagttatgttctttgcatttgaaggaaaataagaggtcatttagaggagtaatcaat 9396687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 394 - 482
Target Start/End: Original strand, 21199556 - 21199644
Alignment:
Q  394 agtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggtaaaatcggaaggtttgacgagtttgatcgag 482  Q
    ||||||| |||||||||   |||| ||||||||||   |||||||||||| || |||| ||||||||| ||||||||||||||| ||||    
T  21199556 agtttacgtttttaggtggcaaaaccgtgttaactccaaggtaaactcgatttttggtgaaatcggaaagtttgacgagtttgaccgag 21199644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 258 - 328
Target Start/End: Original strand, 30355260 - 30355330
Alignment:
Q  258 atgacagagcatcatatgatattttagtctatgtttttagttactttca-ttgcatttaaaggaaaataaga 328  Q
    ||||| ||||||||||||||||||| | |||||||||||| |||||| | |||||||| |||| ||||||||    
T  30355260 atgacggagcatcatatgatatttttggctatgtttttag-tacttttacttgcatttgaaggtaaataaga 30355330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 277 - 350
Target Start/End: Complemental strand, 26512939 - 26512865
Alignment:
Q  277 tattttagtctatgtttttagttactttcattgcatttaaaggaaaataaga-gttatttagaggagttatcaat 350  Q
    ||||| || ||||||||||||||| |||  |||||||| |||| |||||||| || ||||||||||||| |||||    
T  26512939 tatttcagactatgtttttagttattttgtttgcatttgaaggcaaataagaggtcatttagaggagttgtcaat 26512865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 277 - 350
Target Start/End: Complemental strand, 26518055 - 26517981
Alignment:
Q  277 tattttagtctatgtttttagttactttcattgcatttaaaggaaaataaga-gttatttagaggagttatcaat 350  Q
    ||||| || ||||||||||||||| |||  |||||||| |||| |||||||| || ||||||||||||| |||||    
T  26518055 tatttcagactatgtttttagttattttgtttgcatttgaaggcaaataagaggtcatttagaggagttgtcaat 26517981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 256 - 329
Target Start/End: Complemental strand, 1755735 - 1755662
Alignment:
Q  256 tgatgacagagcatcatatgatattttagtctatgtttttagttactttcattgcatttaaaggaaaataagag 329  Q
    ||||||| |||||||||||||||| | ||  |||||||||||||| |||| ||| |||| |||  |||||||||    
T  1755735 tgatgacggagcatcatatgatatatcaggttatgtttttagttattttctttgaatttgaagacaaataagag 1755662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 393 - 469
Target Start/End: Complemental strand, 7835463 - 7835387
Alignment:
Q  393 gagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggtaaaatcggaaggtttgac 469  Q
    |||||||| |||||||||   |||| |||||||| | |||||||||||||  || |||| ||||||||| |||||||    
T  7835463 gagtttacgtttttaggtggcaaaaacgtgttaagtcggaggtaaactcggtttttggtgaaatcggaaagtttgac 7835387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 93; Significance: 5e-45; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 353 - 497
Target Start/End: Complemental strand, 44256552 - 44256408
Alignment:
Q  353 caatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggta 452  Q
    |||||| ||||||||||||||||||||||||||| |||| |||||||| ||||||| |||||||||||||||||||  ||||||||||||| ||||||||    
T  44256552 caatgtcccgcaaatcgagtgttaactctccgagattatcgagtttacgtttttagatacaaaaatcgtgttaactctgaggtaaactcgatttctggta 44256453  T
Q  453 aaatcggaaggtttgacgagtttgatcgagatagcactcggtaaa 497  Q
    |||||||||||||| ||||||||||  ||| || |||||||||||    
T  44256452 aaatcggaaggtttaacgagtttgactgagttaacactcggtaaa 44256408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 353 - 497
Target Start/End: Original strand, 510054 - 510198
Alignment:
Q  353 caatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggta 452  Q
    |||||| |||||||||||||||||| |||||||| |||| ||||||||||||||||||||||||||||||||||||  |||||||| |||  ||||||||    
T  510054 caatgttccgcaaatcgagtgttaaatctccgagattatcgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggta 510153  T
Q  453 aaatcggaaggtttgacgagtttgatcgagatagcactcggtaaa 497  Q
    |||| ||||||||| ||||||||||  ||| || |||||||||||    
T  510154 aaattggaaggtttaacgagtttgactgagttaacactcggtaaa 510198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 353 - 497
Target Start/End: Original strand, 28342719 - 28342863
Alignment:
Q  353 caatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggta 452  Q
    |||||| |||||||||||||||||| |||||||| |||| ||||||||||||||||||||||||||||||||||||  |||||||| |||  ||||||||    
T  28342719 caatgttccgcaaatcgagtgttaaatctccgagattatcgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggta 28342818  T
Q  453 aaatcggaaggtttgacgagtttgatcgagatagcactcggtaaa 497  Q
    |||| ||||||||| ||||||||||  ||| || |||||||||||    
T  28342819 aaattggaaggtttaacgagtttgactgagttaacactcggtaaa 28342863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 353 - 497
Target Start/End: Original strand, 37328315 - 37328459
Alignment:
Q  353 caatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggta 452  Q
    |||||| |||||||||||||||| |||||||||| |||| |||||||| |||||||||||||||||||||||||||   |||||||||||| ||||||||    
T  37328315 caatgttccgcaaatcgagtgttgactctccgagattatcgagtttacgtttttaggtacaaaaatcgtgttaactctaaggtaaactcgatttctggta 37328414  T
Q  453 aaatcggaaggtttgacgagtttgatcgagatagcactcggtaaa 497  Q
    |||||||||||||| ||| ||||||  ||| || |||||||||||    
T  37328415 aaatcggaaggtttaacgtgtttgactgagttaacactcggtaaa 37328459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 353 - 497
Target Start/End: Original strand, 7993565 - 7993709
Alignment:
Q  353 caatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggta 452  Q
    |||||| ||||||||||||||||||||||||||| |||  |||| || ||||||| ||||||||||||||||||||  ||||||||||||  ||||||||    
T  7993565 caatgttccgcaaatcgagtgttaactctccgagattaccgagtatatatttttaagtacaaaaatcgtgttaactatgaggtaaactcggtttctggta 7993664  T
Q  453 aaatcggaaggtttgacgagtttgatcgagatagcactcggtaaa 497  Q
    |||||||||||||| ||||||||||  ||| || |||||||||||    
T  7993665 aaatcggaaggtttaacgagtttgactgagttaacactcggtaaa 7993709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 353 - 477
Target Start/End: Original strand, 18838818 - 18838942
Alignment:
Q  353 caatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggta 452  Q
    |||||| ||||||||||||||||||||||||||| |||  ||||||||||||||||||||||||||||||||||||  |||||||| |||  ||||||||    
T  18838818 caatgttccgcaaatcgagtgttaactctccgagattaccgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggta 18838917  T
Q  453 aaatcggaaggtttgacgagtttga 477  Q
    |||| ||||||||| ||||||||||    
T  18838918 aaattggaaggtttaacgagtttga 18838942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 353 - 497
Target Start/End: Complemental strand, 29614592 - 29614448
Alignment:
Q  353 caatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggta 452  Q
    |||||| |||||||||||||||||| |||||||| |||| ||||||||||||||||||||||||||||||||||||  |||||||| |||  ||||||||    
T  29614592 caatgttccgcaaatcgagtgttaaatctccgagattatcgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggta 29614493  T
Q  453 aaatcggaaggtttgacgagtttgatcgagatagcactcggtaaa 497  Q
    |||| | ||||||| ||||||||||  ||| || |||||||||||    
T  29614492 aaattgaaaggtttaacgagtttgactgagttaacactcggtaaa 29614448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 361 - 497
Target Start/End: Original strand, 12740786 - 12740922
Alignment:
Q  361 cgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggtaaaatcgga 460  Q
    |||||||||||||||||||||||||| |||  |||||||| ||||||||||| |||||||||||||||  ||||||||||||   ||||||||||| |||    
T  12740786 cgcaaatcgagtgttaactctccgagattaccgagtttacgtttttaggtaccaaaatcgtgttaactctgaggtaaactcggtgtctggtaaaattgga 12740885  T
Q  461 aggtttgacgagtttgatcgagatagcactcggtaaa 497  Q
    |||||||||||||||||   || ||||||||||||||    
T  12740886 aggtttgacgagtttgactaagttagcactcggtaaa 12740922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 353 - 497
Target Start/End: Original strand, 23101699 - 23101843
Alignment:
Q  353 caatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggta 452  Q
    |||||| |||||||||||||||||| |||||||| |||| ||||||||||||||||||||||||||||||||||||   ||||||| ||   ||||||||    
T  23101699 caatgttccgcaaatcgagtgttaaatctccgagattatcgagtttacatttttaggtacaaaaatcgtgttaactctaaggtaaaatcagtttctggta 23101798  T
Q  453 aaatcggaaggtttgacgagtttgatcgagatagcactcggtaaa 497  Q
    |||| ||||||||| ||||||||||  ||| || |||||||||||    
T  23101799 aaattggaaggtttaacgagtttgactgagttaacactcggtaaa 23101843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 353 - 497
Target Start/End: Original strand, 29893380 - 29893524
Alignment:
Q  353 caatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggta 452  Q
    |||||| ||||||||||||||||||||||||||| |||  ||||||||||||||| ||||||||||||||||||||  |||||||||||   |||||||     
T  29893380 caatgttccgcaaatcgagtgttaactctccgagattaccgagtttacatttttaagtacaaaaatcgtgttaactctgaggtaaactcagtttctggtg 29893479  T
Q  453 aaatcggaaggtttgacgagtttgatcgagatagcactcggtaaa 497  Q
    |||||| ||||||| ||||||||||  ||| || |||||||||||    
T  29893480 aaatcgaaaggtttaacgagtttgactgagttaacactcggtaaa 29893524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 353 - 497
Target Start/End: Original strand, 39784515 - 39784659
Alignment:
Q  353 caatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggta 452  Q
    |||||| ||| |||||||||||||| ||| |||| |||| ||||||||||||||||||||||||||||||||||||  |||||||| |||  ||||||||    
T  39784515 caatgttccgtaaatcgagtgttaaatcttcgagattatcgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggta 39784614  T
Q  453 aaatcggaaggtttgacgagtttgatcgagatagcactcggtaaa 497  Q
    |||| ||||||||| ||||||||||  ||| || |||||||||||    
T  39784615 aaattggaaggtttaacgagtttgacagagttaacactcggtaaa 39784659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 360 - 497
Target Start/End: Original strand, 3023349 - 3023486
Alignment:
Q  360 ccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggtaaaatcgg 459  Q
    ||||||||||||||||||||||||||| |||| |||||||  |||||||||||||||||| ||||||||| |||||||| |||  ||||| |||||| ||    
T  3023349 ccgcaaatcgagtgttaactctccgagattatcgagtttatgtttttaggtacaaaaatcatgttaactttgaggtaaaatcggtttctgataaaattgg 3023448  T
Q  460 aaggtttgacgagtttgatcgagatagcactcggtaaa 497  Q
    ||||||| ||||||||||  ||| || |||||||||||    
T  3023449 aaggtttaacgagtttgactgagttaacactcggtaaa 3023486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 353 - 458
Target Start/End: Original strand, 43172115 - 43172220
Alignment:
Q  353 caatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggta 452  Q
    |||||| ||||||||||||||||||||||| |||||||  |||||||||||||||||||  |||||| |||||||| |||||||||||||| ||||||||    
T  43172115 caatgttccgcaaatcgagtgttaactctctgagtttaccgagtttacatttttaggtatcaaaatcatgttaactcggaggtaaactcgatttctggta 43172214  T
Q  453 aaatcg 458  Q
    ||||||    
T  43172215 aaatcg 43172220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 369 - 497
Target Start/End: Original strand, 21486119 - 21486247
Alignment:
Q  369 gagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggtaaaatcggaaggtttga 468  Q
    |||||||||||||  |||||||| ||||||||| |||||| ||  ||||||||||||||||| |||||||||||| || |||||||||  ||||||||||    
T  21486119 gagtgttaactctttgagtttatcgagtttacacttttagatatcaaaatcgtgttaacttgaaggtaaactcgaattttggtaaaattagaaggtttga 21486218  T
Q  469 cgagtttgatcgagatagcactcggtaaa 497  Q
     ||||||||||||| || |||||||||||    
T  21486219 tgagtttgatcgagttaacactcggtaaa 21486247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 353 - 469
Target Start/End: Original strand, 32884179 - 32884295
Alignment:
Q  353 caatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggta 452  Q
    |||||| ||| ||||||||||||||||||||||| |||  |||||||| ||||||||||||||||||| |||||||  |||||||||||   ||||||||    
T  32884179 caatgttccgtaaatcgagtgttaactctccgagattaccgagtttacgtttttaggtacaaaaatcgagttaactctgaggtaaactctgtttctggta 32884278  T
Q  453 aaatcggaaggtttgac 469  Q
    |||||||||||||||||    
T  32884279 aaatcggaaggtttgac 32884295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 353 - 497
Target Start/End: Original strand, 41827736 - 41827880
Alignment:
Q  353 caatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggta 452  Q
    |||||| |||||||| |||||||||||||| ||| |||| |||||||| |||||||||||||||||||||||||||  |||||||||||   ||||||||    
T  41827736 caatgttccgcaaattgagtgttaactctctgagattattgagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaactcagtttctggta 41827835  T
Q  453 aaatcggaaggtttgacgagtttgatcgagatagcactcggtaaa 497  Q
    ||||| |||| ||| || |||||||  ||| || |||||||||||    
T  41827836 aaatcagaagatttaacaagtttgactgagttaacactcggtaaa 41827880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 354 - 497
Target Start/End: Original strand, 42610579 - 42610722
Alignment:
Q  354 aatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggtaa 453  Q
    ||||| |||||||| |||||||||||||| |||||||  || ||||| | ||||||||| ||||||||||||| || |||||||||| |  |||||||||    
T  42610579 aatgttccgcaaattgagtgttaactctctgagtttaccgaatttacgtgtttaggtaccaaaatcgtgttaaatttgaggtaaacttggtttctggtaa 42610678  T
Q  454 aatcggaaggtttgacgagtttgatcgagatagcactcggtaaa 497  Q
    |||| ||||||||||||||||||| |||| || |||| ||||||    
T  42610679 aatcagaaggtttgacgagtttgaccgagttaacactgggtaaa 42610722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 360 - 477
Target Start/End: Complemental strand, 40460504 - 40460387
Alignment:
Q  360 ccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggtaaaatcgg 459  Q
    |||||||||||||||||||||| |||| |||  ||||||||  ||||||||||||||||||||||||||  |||||||| |||  |||||||||||| ||    
T  40460504 ccgcaaatcgagtgttaactcttcgagattaccgagtttacgcttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggtaaaattgg 40460405  T
Q  460 aaggtttgacgagtttga 477  Q
    ||||||| ||||||||||    
T  40460404 aaggtttaacgagtttga 40460387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 360 - 477
Target Start/End: Complemental strand, 44121723 - 44121606
Alignment:
Q  360 ccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggtaaaatcgg 459  Q
    ||||||||||||||||||||||| ||| |||  || ||||| |||||||||||||||||||||||||||  |||||||| |||  |||||||||||||||    
T  44121723 ccgcaaatcgagtgttaactctctgagattaccgaatttacgtttttaggtacaaaaatcgtgttaactatgaggtaaattcggtttctggtaaaatcgg 44121624  T
Q  460 aaggtttgacgagtttga 477  Q
    |||| || ||||||||||    
T  44121623 aaggcttaacgagtttga 44121606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 353 - 477
Target Start/End: Complemental strand, 28034645 - 28034521
Alignment:
Q  353 caatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggta 452  Q
    |||||| ||||||||||||||||||||||| ||| |||  |||||||| |||||| ||||||||||||||||||||  || ||||| |||  ||||||||    
T  28034645 caatgttccgcaaatcgagtgttaactctctgagattaccgagtttacgtttttatgtacaaaaatcgtgttaactctgatgtaaaatcggtttctggta 28034546  T
Q  453 aaatcggaaggtttgacgagtttga 477  Q
    |||| ||||||||| ||||||||||    
T  28034545 aaattggaaggtttaacgagtttga 28034521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 353 - 497
Target Start/End: Original strand, 29585922 - 29586066
Alignment:
Q  353 caatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggta 452  Q
    |||||| ||||| || |||||||||||||| ||| |||  |||||||| |||||||||||||||||||||||||||  |||||||| |||  ||| ||||    
T  29585922 caatgttccgcagattgagtgttaactctctgagattaccgagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaagtcggtttcgggta 29586021  T
Q  453 aaatcggaaggtttgacgagtttgatcgagatagcactcggtaaa 497  Q
    |||||||||||||| | ||||||||  ||| || |||||||||||    
T  29586022 aaatcggaaggtttaatgagtttgactgagttaacactcggtaaa 29586066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 353 - 477
Target Start/End: Complemental strand, 33892031 - 33891907
Alignment:
Q  353 caatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggta 452  Q
    |||||| ||||||||||||||||||||||||||| |||   ||||||| |||||||||||||||||||||||||||   ||||||| |||  ||||||||    
T  33892031 caatgttccgcaaatcgagtgttaactctccgagattaccaagtttacgtttttaggtacaaaaatcgtgttaactctaaggtaaaatcggtttctggta 33891932  T
Q  453 aaatcggaaggtttgacgagtttga 477  Q
    |||| ||||||||| |||| |||||    
T  33891931 aaattggaaggtttaacgaatttga 33891907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 353 - 497
Target Start/End: Complemental strand, 37972674 - 37972530
Alignment:
Q  353 caatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggta 452  Q
    |||||| |||||||||||||||||||| || ||| |||  |||||||| ||||||||||| |||||||||||||||  ||| |||||||   ||||||||    
T  37972674 caatgttccgcaaatcgagtgttaactttctgagattaccgagtttacgtttttaggtaccaaaatcgtgttaactctgagataaactcagtttctggta 37972575  T
Q  453 aaatcggaaggtttgacgagtttgatcgagatagcactcggtaaa 497  Q
    |||||||||||||| |||| |||||  ||| ||||||| ||||||    
T  37972574 aaatcggaaggtttaacgaatttgactgagttagcacttggtaaa 37972530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 361 - 477
Target Start/End: Original strand, 8675747 - 8675864
Alignment:
Q  361 cgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggt-aaaatcgg 459  Q
    |||||||||||||||||||||||||| |||  ||||| || ||||||||||| |||||||||||||||   |||||||||||  ||||||| |||||||     
T  8675747 cgcaaatcgagtgttaactctccgagattaccgagttaacgtttttaggtaccaaaatcgtgttaactctaaggtaaactcggtttctggtaaaaatcga 8675846  T
Q  460 aaggtttgacgagtttga 477  Q
    ||||||||||||||||||    
T  8675847 aaggtttgacgagtttga 8675864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 353 - 497
Target Start/End: Original strand, 14741387 - 14741531
Alignment:
Q  353 caatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggta 452  Q
    |||||| || ||||||| |||| |||||  ||||||||  |||||||| | ||||||| | |||| |||||||||| |||||||||||||| |||| |||    
T  14741387 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagta 14741486  T
Q  453 aaatcggaaggtttgacgagtttgatcgagatagcactcggtaaa 497  Q
    ||||||||| ||||||||||||||| |||| || ||||| |||||    
T  14741487 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaa 14741531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 353 - 477
Target Start/End: Complemental strand, 26201929 - 26201805
Alignment:
Q  353 caatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggta 452  Q
    |||||| || |||||||||||||||||  |||||||||  || ||||||||||||||||| |||||||||| |||| |||||||||||| | |  || ||    
T  26201929 caatgttccacaaatcgagtgttaacttgccgagtttaccgaatttacatttttaggtaccaaaatcgtgtaaactcggaggtaaactcaattattgcta 26201830  T
Q  453 aaatcggaaggtttgacgagtttga 477  Q
    ||||||||| |||||||||||||||    
T  26201829 aaatcggaatgtttgacgagtttga 26201805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 353 - 477
Target Start/End: Original strand, 39028495 - 39028619
Alignment:
Q  353 caatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggta 452  Q
    |||||| ||||||||||||||||||||||||||| |||  |||||||| ||||||||||||||||| |||| ||||  |||||||| |||  ||||||||    
T  39028495 caatgttccgcaaatcgagtgttaactctccgagattaccgagtttacgtttttaggtacaaaaattgtgtaaactctgaggtaaaatcggtttctggta 39028594  T
Q  453 aaatcggaaggtttgacgagtttga 477  Q
     ||| ||||| ||| ||||||||||    
T  39028595 caattggaagatttaacgagtttga 39028619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 351 - 497
Target Start/End: Complemental strand, 4640015 - 4639869
Alignment:
Q  351 agcaatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctgg 450  Q
    |||||||| || ||||||| |||| |||||  ||||||||  |||||||| | ||||||| | |||| |||||||||| |||||||||||| | ||||||    
T  4640015 agcaatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactctatttctgg 4639916  T
Q  451 taaaatcggaaggtttgacgagtttgatcgagatagcactcggtaaa 497  Q
    |||||||||||  |||||||||||||| |||| || ||||| |||||    
T  4639915 taaaatcggaaattttgacgagtttgaccgagttaacactcagtaaa 4639869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 351 - 477
Target Start/End: Original strand, 27148804 - 27148930
Alignment:
Q  351 agcaatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctgg 450  Q
    |||||||| || |||||||||||||||||| |  ||||||| |||||||| ||||||||||  ||||||||||||| | |||||||| ||| | ||| |     
T  27148804 agcaatgttccacaaatcgagtgttaactcgcaaagtttatcgagtttacgtttttaggtatcaaaatcgtgttaaatcggaggtaacctcaatttcagc 27148903  T
Q  451 taaaatcggaaggtttgacgagtttga 477  Q
    ||||||| ||| |||||||||||||||    
T  27148904 taaaatcagaatgtttgacgagtttga 27148930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 393 - 477
Target Start/End: Complemental strand, 11735289 - 11735205
Alignment:
Q  393 gagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggtaaaatcggaaggtttgacgagtttga 477  Q
    ||||||||  |||||||| | ||||||||||||||| |||||||||||||| ||||||||||||||||| ||||| |||||||||    
T  11735289 gagtttacgattttaggtcccaaaatcgtgttaactcggaggtaaactcgatttctggtaaaatcggaatgtttgccgagtttga 11735205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 414 - 497
Target Start/End: Original strand, 23017014 - 23017097
Alignment:
Q  414 aaaatcgtgttaacttggaggtaaactcgacttctggtaaaatcggaaggtttgacgagtttgatcgagatagcactcggtaaa 497  Q
    ||||| |||||||||||||||||||||||| |||| ||||||| ||||| |||||||||||||| |||| || |||||||||||    
T  23017014 aaaattgtgttaacttggaggtaaactcgatttctcgtaaaattggaagatttgacgagtttgaccgagttaacactcggtaaa 23017097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 353 - 459
Target Start/End: Original strand, 33383082 - 33383188
Alignment:
Q  353 caatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggta 452  Q
    |||||| ||||||||||||||||||||||||||| |||  |||||||| ||||||||||| ||||||||| |||||  ||| ||||||||  ||||| ||    
T  33383082 caatgttccgcaaatcgagtgttaactctccgagattaccgagtttacgtttttaggtaccaaaatcgtggtaactctgagataaactcggtttctgata 33383181  T
Q  453 aaatcgg 459  Q
    || ||||    
T  33383182 aactcgg 33383188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 393 - 498
Target Start/End: Complemental strand, 48136985 - 48136880
Alignment:
Q  393 gagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggtaaaatcggaaggtttgacgagtttgatcgagatagcactcg 492  Q
    |||||||| ||||||||||| |||||||||||||||  |||||||||||   ||||||||||||  |||||||||||||||||||  ||| || ||||||    
T  48136985 gagtttacgtttttaggtaccaaaatcgtgttaactctgaggtaaactcagtttctggtaaaattagaaggtttgacgagtttgactgagttaacactcg 48136886  T
Q  493 gtaaat 498  Q
     |||||    
T  48136885 ataaat 48136880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 351 - 491
Target Start/End: Original strand, 16709394 - 16709532
Alignment:
Q  351 agcaatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctgg 450  Q
    |||||||| ||||||||| |||||||||  |  |||||||  |||||||| ||||||||||| ||||||||| |||||  ||||||||||| | || |||    
T  16709394 agcaatgttccgcaaatcaagtgttaacattatgagtttaccgagtttacgtttttaggtaccaaaatcgtggtaactctgaggtaaactc-agtt-tgg 16709491  T
Q  451 taaaatcggaaggtttgacgagtttgatcgagatagcactc 491  Q
    |||| |||||||||||||| ||||||| |||| || |||||    
T  16709492 taaactcggaaggtttgacaagtttgaccgagttaacactc 16709532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 351 - 491
Target Start/End: Original strand, 17683630 - 17683768
Alignment:
Q  351 agcaatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctgg 450  Q
    |||||||| ||||||||| |||||||||  |  |||||||  |||||||| ||||||||||| ||||||||| |||||  ||||||||||| | || |||    
T  17683630 agcaatgttccgcaaatcaagtgttaacattatgagtttaccgagtttacgtttttaggtaccaaaatcgtggtaactctgaggtaaactc-agtt-tgg 17683727  T
Q  451 taaaatcggaaggtttgacgagtttgatcgagatagcactc 491  Q
    |||| |||||||||||||| ||||||| |||| || |||||    
T  17683728 taaactcggaaggtttgacaagtttgaccgagttaacactc 17683768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 393 - 477
Target Start/End: Complemental strand, 33497192 - 33497108
Alignment:
Q  393 gagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggtaaaatcggaaggtttgacgagtttga 477  Q
    ||||||||||||||| |||  |||||||||| |||| |||||||||||||| ||||| |||||| |||| |||||||||||||||    
T  33497192 gagtttacatttttaagtatcaaaatcgtgtcaactcggaggtaaactcgatttctgataaaattggaatgtttgacgagtttga 33497108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 415 - 497
Target Start/End: Original strand, 30823108 - 30823190
Alignment:
Q  415 aaatcgtgttaacttggaggtaaactcgacttctggtaaaatcggaaggtttgacgagtttgatcgagatagcactcggtaaa 497  Q
    ||||||||||||||  ||||||||||||  |||| ||||||||||||||||  ||||||||||| ||| || |||||||||||    
T  30823108 aaatcgtgttaactctgaggtaaactcggtttctagtaaaatcggaaggttcaacgagtttgattgagttaacactcggtaaa 30823190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 434 - 497
Target Start/End: Original strand, 21067869 - 21067932
Alignment:
Q  434 gtaaactcgacttctggtaaaatcggaaggtttgacgagtttgatcgagatagcactcggtaaa 497  Q
    |||||||||| |||||||||||||||||||||| ||||||||||  ||| || |||||||||||    
T  21067869 gtaaactcgatttctggtaaaatcggaaggtttaacgagtttgactgagttaacactcggtaaa 21067932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 394 - 482
Target Start/End: Complemental strand, 14732393 - 14732305
Alignment:
Q  394 agtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggtaaaatcggaaggtttgacgagtttgatcgag 482  Q
    ||||||| |||||||||   |||| |||||||||| ||||||||||| |  || |||| ||||||||| ||||||||||||||| ||||    
T  14732393 agtttacgtttttaggtggcaaaaacgtgttaactcggaggtaaacttggtttttggtgaaatcggaaagtttgacgagtttgaccgag 14732305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 264 - 347
Target Start/End: Complemental strand, 22532818 - 22532734
Alignment:
Q  264 gagcatcatatgatattttagtctatgtttttagttactttcattgcatttaaaggaaaataaga-gttatttagaggagttatc 347  Q
    ||||||||||||||||||||| ||||||||||||||| |||  ||| |||| || |||||||| | || || |||||||||||||    
T  22532818 gagcatcatatgatattttaggctatgtttttagttattttatttgtatttgaaagaaaataaaaggtcatgtagaggagttatc 22532734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 258 - 344
Target Start/End: Complemental strand, 2353421 - 2353335
Alignment:
Q  258 atgacagagcatcatatgatattttagtctatgtttttagttactttcattgcatttaaaggaaaataaga-gttatttagaggagtt 344  Q
    ||||| ||||||| ||||||||||||| ||||||||||||||  |||| |||||||| || || ||||||| || |||||||||||||    
T  2353421 atgacggagcatcgtatgatattttaggctatgtttttagttgttttctttgcatttgaa-gacaataagaggtcatttagaggagtt 2353335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 393 - 482
Target Start/End: Original strand, 21024067 - 21024156
Alignment:
Q  393 gagtttacatttttaggt-acaaaaatcgtgttaacttggaggtaaactcgacttctggtaaaatcggaaggtttgacgagtttgatcgag 482  Q
    ||||||||  |||||||| ||||||| |||||||||| | |||||||||||  || |||| ||||||||| ||||||||||||||| ||||    
T  21024067 gagtttacgattttaggtgacaaaaa-cgtgttaactcgaaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgag 21024156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 254 - 327
Target Start/End: Original strand, 7142028 - 7142101
Alignment:
Q  254 actgatgacagagcatcatatgatattttagtctatgtttttagttactttcattgcatttaaaggaaaataag 327  Q
    ||||||||||||||||||||||| ||||| | ||||||||||| |   |||| ||||||||||||  |||||||    
T  7142028 actgatgacagagcatcatatgacatttttggctatgtttttaatagttttctttgcatttaaagacaaataag 7142101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 256 - 344
Target Start/End: Complemental strand, 28952122 - 28952033
Alignment:
Q  256 tgatgacagagcatcatatgatattttagtctatgtttttagttactttcattgcatttaaag-gaaaataagagttatttagaggagtt 344  Q
    ||||||||||||||||||||||| ||||| ||||| ||||||| | |||| || ||||| |||  ||| ||| | |||||||||||||||    
T  28952122 tgatgacagagcatcatatgatactttaggctatgcttttagtcattttctttacatttgaagataaattaaaaattatttagaggagtt 28952033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 264 - 323
Target Start/End: Original strand, 18496505 - 18496564
Alignment:
Q  264 gagcatcatatgatattttagtctatgtttttagttactttcattgcatttaaaggaaaa 323  Q
    ||||| ||||||||||||||| |||||||||||||   |||| |||||||| ||||||||    
T  18496505 gagcaccatatgatattttaggctatgtttttagtagttttctttgcatttgaaggaaaa 18496564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 352
Target Start/End: Original strand, 29544459 - 29544548
Alignment:
Q  264 gagcatcatatgatattttagtctatgtttttagttactttcattgcatttaaaggaaaataaga-gttatttagaggagttatcaatag 352  Q
    ||||||||||||||||||| | ||||||||||| | | |||| |||||||| |||  |||||||| |  | ||||||||||| |||||||    
T  29544459 gagcatcatatgatatttttggctatgtttttattaattttctttgcatttgaagacaaataagatgagagttagaggagttgtcaatag 29544548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 420 - 497
Target Start/End: Original strand, 47067185 - 47067262
Alignment:
Q  420 gtgttaacttggaggtaaactcgacttctggtaaaatcggaaggtttgacgagtttgatcgagatagcactcggtaaa 497  Q
    |||||||||  ||| |||| |||| |||||||||||| | ||||||| ||||||||||  ||| || |||||||||||    
T  47067185 gtgttaactctgagataaaatcgatttctggtaaaattgaaaggtttaacgagtttgactgagttaacactcggtaaa 47067262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 256 - 296
Target Start/End: Original strand, 20446171 - 20446210
Alignment:
Q  256 tgatgacagagcatcatatgatattttagtctatgttttta 296  Q
    ||||||||||||| ||||||||||||||| |||||||||||    
T  20446171 tgatgacagagcaacatatgatattttag-ctatgttttta 20446210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 93; Significance: 5e-45; HSPs: 53)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 353 - 497
Target Start/End: Original strand, 45272976 - 45273120
Alignment:
Q  353 caatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggta 452  Q
    |||||| ||||||||||||||||||||||||||| |||| |||||||| ||||||||||||||||| |||||||||  ||||||||||||  ||||||||    
T  45272976 caatgttccgcaaatcgagtgttaactctccgagattatcgagtttacgtttttaggtacaaaaattgtgttaactctgaggtaaactcggtttctggta 45273075  T
Q  453 aaatcggaaggtttgacgagtttgatcgagatagcactcggtaaa 497  Q
    |||||||||||||||||||||||||  ||| || |||||||||||    
T  45273076 aaatcggaaggtttgacgagtttgactgagttaacactcggtaaa 45273120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 352 - 497
Target Start/End: Complemental strand, 47371715 - 47371570
Alignment:
Q  352 gcaatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggt 451  Q
    |||||||  |||||||||||||||||| ||| |||||||| |||||||| |  |||||||| ||||||||||||||| |||||||||||||| |||||||    
T  47371715 gcaatgtttcgcaaatcgagtgttaacactctgagtttatcgagtttacgtacttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggt 47371616  T
Q  452 aaaatcggaaggtttgacgagtttgatcgagatagcactcggtaaa 497  Q
    |||||||||||||||| ||||||||| |||| || |||||||||||    
T  47371615 aaaatcggaaggtttgccgagtttgaccgagttaacactcggtaaa 47371570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 353 - 497
Target Start/End: Original strand, 6312985 - 6313129
Alignment:
Q  353 caatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggta 452  Q
    |||||| |||||||||||||||||| |||||||| |||| ||||||||||||||||||||||||||||||||||||  |||||||| |||  ||||||||    
T  6312985 caatgttccgcaaatcgagtgttaaatctccgagattatcgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggta 6313084  T
Q  453 aaatcggaaggtttgacgagtttgatcgagatagcactcggtaaa 497  Q
    |||| ||||||||| ||||||||||  ||| || |||||||||||    
T  6313085 aaattggaaggtttaacgagtttgactgagttaacactcggtaaa 6313129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 353 - 497
Target Start/End: Complemental strand, 15834823 - 15834679
Alignment:
Q  353 caatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggta 452  Q
    |||||| ||||||||||||||||||||||||||| |||  ||||||||||||||||||||||||||||||||||||  |||||||| |||| || |||||    
T  15834823 caatgttccgcaaatcgagtgttaactctccgagattaccgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaattcgatttttggta 15834724  T
Q  453 aaatcggaaggtttgacgagtttgatcgagatagcactcggtaaa 497  Q
    |||| ||||||||| ||||||||||  ||| || |||||||||||    
T  15834723 aaattggaaggtttaacgagtttgactgagttaacactcggtaaa 15834679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 353 - 497
Target Start/End: Original strand, 25612501 - 25612645
Alignment:
Q  353 caatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggta 452  Q
    |||||| |||||||||||||||||| |||||||| |||| ||||||||||||||||||||||||||||||||||||  |||||||| |||  ||||||||    
T  25612501 caatgttccgcaaatcgagtgttaaatctccgagattatcgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggta 25612600  T
Q  453 aaatcggaaggtttgacgagtttgatcgagatagcactcggtaaa 497  Q
    |||| ||||||||| ||||||||||  ||| || |||||||||||    
T  25612601 aaattggaaggtttaacgagtttgactgagttaacactcggtaaa 25612645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 353 - 497
Target Start/End: Complemental strand, 29396223 - 29396079
Alignment:
Q  353 caatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggta 452  Q
    |||||| |||||||||||||||||| |||||||| |||| ||||||||||||||||||||||||||||||||||||  |||||||| |||  ||||||||    
T  29396223 caatgttccgcaaatcgagtgttaaatctccgagattatcgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggta 29396124  T
Q  453 aaatcggaaggtttgacgagtttgatcgagatagcactcggtaaa 497  Q
    |||| ||||||||| ||||||||||  ||| || |||||||||||    
T  29396123 aaattggaaggtttaacgagtttgactgagttaacactcggtaaa 29396079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 353 - 497
Target Start/End: Original strand, 46328395 - 46328539
Alignment:
Q  353 caatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggta 452  Q
    |||||| |||||||||||||||||| |||||||| |||  |||||||| |||||||||||||||||||||||||||  ||||||||||||  ||||| ||    
T  46328395 caatgttccgcaaatcgagtgttaattctccgagattaccgagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaactcggtttctgtta 46328494  T
Q  453 aaatcggaaggtttgacgagtttgatcgagatagcactcggtaaa 497  Q
    |||||||||||||| ||||||||||| ||| || |||||||||||    
T  46328495 aaatcggaaggtttaacgagtttgattgagttaacactcggtaaa 46328539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 353 - 497
Target Start/End: Complemental strand, 8141022 - 8140878
Alignment:
Q  353 caatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggta 452  Q
    |||||| ||||||||||||||||||||||||||| |||| |||||||| |||||||||||||||||||||||||||  |||||||| |||| ||||||||    
T  8141022 caatgttccgcaaatcgagtgttaactctccgagattatcgagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaaatcgatttctggta 8140923  T
Q  453 aaatcggaaggtttgacgagtttgatcgagatagcactcggtaaa 497  Q
    ||||  |||||||| | ||||||||  ||| || |||||||||||    
T  8140922 aaattagaaggtttaatgagtttgactgagttaacactcggtaaa 8140878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 354 - 497
Target Start/End: Complemental strand, 3583694 - 3583551
Alignment:
Q  354 aatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggtaa 453  Q
    ||||| |||||||||||||||||||||||||||||||  |||||||| |||||||||||  ||||||||||||||| || |||||||||  |||| ||||    
T  3583694 aatgttccgcaaatcgagtgttaactctccgagtttaccgagtttacgtttttaggtaccgaaatcgtgttaacttagaagtaaactcggtttctagtaa 3583595  T
Q  454 aatcggaaggtttgacgagtttgatcgagatagcactcggtaaa 497  Q
    |||||||| ||||||||||||| | |||| || |||||||||||    
T  3583594 aatcggaaagtttgacgagtttaaccgagttaacactcggtaaa 3583551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 353 - 477
Target Start/End: Complemental strand, 5494887 - 5494763
Alignment:
Q  353 caatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggta 452  Q
    |||||| |||||||| |||||||||||||||||| |||  |||||||| ||||||||||| |||||||||||||||  ||||||||||||  ||||||||    
T  5494887 caatgttccgcaaattgagtgttaactctccgagattaccgagtttacgtttttaggtaccaaaatcgtgttaactctgaggtaaactcggtttctggta 5494788  T
Q  453 aaatcggaaggtttgacgagtttga 477  Q
    ||||| |||||||||| ||||||||    
T  5494787 aaatcagaaggtttgatgagtttga 5494763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 353 - 469
Target Start/End: Complemental strand, 9322297 - 9322181
Alignment:
Q  353 caatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggta 452  Q
    |||||| ||| |||||||||||||| |||||||| |||| ||||||||||||||||||||||||||||||||||||  |||||||| |||  ||||||||    
T  9322297 caatgttccgtaaatcgagtgttaaatctccgagattatcgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggta 9322198  T
Q  453 aaatcggaaggtttgac 469  Q
    |||| ||||||||||||    
T  9322197 aaattggaaggtttgac 9322181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 353 - 497
Target Start/End: Original strand, 51702004 - 51702148
Alignment:
Q  353 caatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggta 452  Q
    |||||| |||||||||||||||||| |||||||| |||| |||||||||||||||||||||||||| |||||||||  |||||||| |||  ||||||||    
T  51702004 caatgttccgcaaatcgagtgttaaatctccgagattatcgagtttacatttttaggtacaaaaattgtgttaactctgaggtaaaatcggtttctggta 51702103  T
Q  453 aaatcggaaggtttgacgagtttgatcgagatagcactcggtaaa 497  Q
    ||||   ||||||| ||||||||||  ||| || |||||||||||    
T  51702104 aaattaaaaggtttaacgagtttgactgagttaacactcggtaaa 51702148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 354 - 497
Target Start/End: Complemental strand, 28404084 - 28403941
Alignment:
Q  354 aatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggtaa 453  Q
    ||||| |||||||||||||||||||||| ||| ||||  |||||||||||||||||||| ||||||||||||||||| ||||||| |||  ||||  |||    
T  28404084 aatgttccgcaaatcgagtgttaactcttcgaatttactgagtttacatttttaggtaccaaaatcgtgttaacttgaaggtaaattcggtttctaataa 28403985  T
Q  454 aatcggaaggtttgacgagtttgatcgagatagcactcggtaaa 497  Q
    ||||| || ||||||||| ||||| |||| || |||||||||||    
T  28403984 aatcgaaatgtttgacgaatttgaccgagttaacactcggtaaa 28403941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 353 - 491
Target Start/End: Complemental strand, 5209507 - 5209369
Alignment:
Q  353 caatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggta 452  Q
    |||||| ||||||||||||||||||| ||| |||||||| |  ||||| | ||||||||| ||||||||||||||| |||||| ||||||| |||||||     
T  5209507 caatgttccgcaaatcgagtgttaacactctgagtttatcgtttttacgtgtttaggtaccaaaatcgtgttaactcggaggtcaactcgatttctggtg 5209408  T
Q  453 aaatcggaaggtttgacgagtttgatcgagatagcactc 491  Q
    ||||| ||| |||||||||||||||||||| || |||||    
T  5209407 aaatcagaaagtttgacgagtttgatcgagttaacactc 5209369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 353 - 497
Target Start/End: Complemental strand, 48966630 - 48966486
Alignment:
Q  353 caatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggta 452  Q
    |||||| |||||||||||| ||||||||| ||||||||  |||||||| | ||||||||| |||||||||||||||  |||||||||| || ||||| |     
T  48966630 caatgttccgcaaatcgagggttaactcttcgagtttactgagtttacgtgtttaggtaccaaaatcgtgttaactctgaggtaaacttgatttctgatg 48966531  T
Q  453 aaatcggaaggtttgacgagtttgatcgagatagcactcggtaaa 497  Q
    |||| |||||||||||||||||||| |||| ||  ||||||||||    
T  48966530 aaattggaaggtttgacgagtttgaccgagttaatactcggtaaa 48966486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 353 - 497
Target Start/End: Complemental strand, 49453200 - 49453055
Alignment:
Q  353 caatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtac-aaaaatcgtgttaacttggaggtaaactcgacttctggt 451  Q
    |||||| |||||||||||||||||||| ||||||||||   ||||||  | ||||||||| ||||||||||||||||  ||||||||||||| ||||||     
T  49453200 caatgttccgcaaatcgagtgttaactgtccgagtttacctagtttatgtgtttaggtaccaaaaatcgtgttaactctgaggtaaactcgatttctgga 49453101  T
Q  452 aaaatcggaaggtttgacgagtttgatcgagatagcactcggtaaa 497  Q
    ||||||  |||||||||| ||||||| |||| || |||||||||||    
T  49453100 aaaatcataaggtttgacaagtttgaccgagttaacactcggtaaa 49453055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 353 - 497
Target Start/End: Original strand, 4005049 - 4005193
Alignment:
Q  353 caatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggta 452  Q
    |||||| || ||||||| |||| |||||  ||||||||  |||||||| | ||||||| | |||| |||||||||| |||||||||||||| ||||||||    
T  4005049 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctggta 4005148  T
Q  453 aaatcggaaggtttgacgagtttgatcgagatagcactcggtaaa 497  Q
    ||||||||| ||||||||||||||| |||| || ||||| |||||    
T  4005149 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaa 4005193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 363 - 474
Target Start/End: Original strand, 52182318 - 52182429
Alignment:
Q  363 caaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggtaaaatcggaag 462  Q
    |||||||||||||||||| |||||||||| |||||||| |||||||||||  ||||||||| || | ||||||||| |||| |||||||||||||| ||     
T  52182318 caaatcgagtgttaactcgccgagtttatcgagtttacgtttttaggtactgaaatcgtgtcaattcggaggtaaattcgatttctggtaaaatcgaaat 52182417  T
Q  463 gtttgacgagtt 474  Q
    ||||||||||||    
T  52182418 gtttgacgagtt 52182429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 360 - 497
Target Start/End: Complemental strand, 35177343 - 35177205
Alignment:
Q  360 ccgcaaatcgagtgtt-aactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggtaaaatcg 458  Q
    |||||||||||||||| ||| ||||||||||||  | ||||  ||||||||||| ||||||||||||| |  ||||||||||||| ||||| ||||||||    
T  35177343 ccgcaaatcgagtgtttaacactccgagtttatcaaatttatgtttttaggtaccaaaatcgtgttaattcagaggtaaactcgatttctgataaaatcg 35177244  T
Q  459 gaaggtttgacgagtttgatcgagatagcactcggtaaa 497  Q
    ||||| ||||||||||||| |||| || |||||| ||||    
T  35177243 gaaggattgacgagtttgaccgagttaacactcgataaa 35177205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 353 - 497
Target Start/End: Complemental strand, 1243445 - 1243301
Alignment:
Q  353 caatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggta 452  Q
    |||||| || ||||||| |||| |||||  ||||||||   ||||||| | ||||||| | |||| |||||||||| |||||||||||||| ||||||||    
T  1243445 caatgttccacaaatcgcgtgtcaactcggcgagtttacctagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctggta 1243346  T
Q  453 aaatcggaaggtttgacgagtttgatcgagatagcactcggtaaa 497  Q
    ||||||||| ||||||||||||||| |||| || ||||| |||||    
T  1243345 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaa 1243301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 353 - 497
Target Start/End: Original strand, 9192006 - 9192150
Alignment:
Q  353 caatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggta 452  Q
    |||||| || ||||||| |||| |||||  ||||||||  |||||||| | ||||||| | |||| |||||||||| |||||||||||||| ||||||||    
T  9192006 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctggta 9192105  T
Q  453 aaatcggaaggtttgacgagtttgatcgagatagcactcggtaaa 497  Q
    ||||| ||| ||||||||||||||| |||| || ||||| |||||    
T  9192106 aaatcagaaagtttgacgagtttgaccgagttaacactcagtaaa 9192150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 353 - 497
Target Start/End: Complemental strand, 38535935 - 38535791
Alignment:
Q  353 caatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggta 452  Q
    |||||| ||||||||||||| |||||||||| || |||  |||||||| ||||||| ||||||||| |||||||||  |||||||||| |  ||||||||    
T  38535935 caatgttccgcaaatcgagttttaactctccaagattaccgagtttacgtttttagttacaaaaattgtgttaactctgaggtaaactgggtttctggta 38535836  T
Q  453 aaatcggaaggtttgacgagtttgatcgagatagcactcggtaaa 497  Q
    ||||||||||  || ||||||||||  ||| || |||||||||||    
T  38535835 aaatcggaagacttaacgagtttgactgagttaacactcggtaaa 38535791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 353 - 497
Target Start/End: Complemental strand, 38558153 - 38558009
Alignment:
Q  353 caatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggta 452  Q
    |||||| ||||||||||||| |||||||||| || |||  |||||||| ||||||| ||||||||| |||||||||  |||||||||| |  ||||||||    
T  38558153 caatgttccgcaaatcgagttttaactctccaagattaccgagtttacgtttttagttacaaaaattgtgttaactctgaggtaaactgggtttctggta 38558054  T
Q  453 aaatcggaaggtttgacgagtttgatcgagatagcactcggtaaa 497  Q
    ||||||||||  || ||||||||||  ||| || |||||||||||    
T  38558053 aaatcggaagacttaacgagtttgactgagttaacactcggtaaa 38558009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 353 - 497
Target Start/End: Original strand, 41353403 - 41353547
Alignment:
Q  353 caatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggta 452  Q
    |||||| || ||||||| |||| |||||  ||||||||  |||||||  | ||||||| | |||| |||||||||| |||||||||||||| ||||||||    
T  41353403 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttatgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctggta 41353502  T
Q  453 aaatcggaaggtttgacgagtttgatcgagatagcactcggtaaa 497  Q
    ||||||||| ||||||||||||||| |||| || ||||| |||||    
T  41353503 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaa 41353547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 353 - 497
Target Start/End: Original strand, 51106874 - 51107018
Alignment:
Q  353 caatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggta 452  Q
    |||||| || ||||||| |||| |||||  ||||||||  |||||||| | ||||||| | |||| |||||||||| ||||| |||||||| ||||||||    
T  51106874 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggaaaactcgatttctggta 51106973  T
Q  453 aaatcggaaggtttgacgagtttgatcgagatagcactcggtaaa 497  Q
    ||||||||| ||||||||||||||| |||| || ||||| |||||    
T  51106974 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaa 51107018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 353 - 497
Target Start/End: Original strand, 8147299 - 8147443
Alignment:
Q  353 caatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggta 452  Q
    |||||| || ||||||| |||| |||||  ||||||||  |||||||| | ||||||| | |||| |||||||||| |||||||||||||| ||||||||    
T  8147299 caatgttccacaaatcgcgtgtcaactcagcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctggta 8147398  T
Q  453 aaatcggaaggtttgacgagtttgatcgagatagcactcggtaaa 497  Q
    |||| | || ||||||||||||||| |||| || ||||| |||||    
T  8147399 aaattgcaaagtttgacgagtttgaccgagttaacactcagtaaa 8147443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 393 - 497
Target Start/End: Original strand, 18798901 - 18799005
Alignment:
Q  393 gagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggtaaaatcggaaggtttgacgagtttgatcgagatagcactcg 492  Q
    ||||||||||||||||||||||||||||||||||||  |||||||| |||  |||||||||||| ||||||||| ||||| ||||  ||| || ||||||    
T  18798901 gagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggtaaaattggaaggtttaacgagattgactgagttaacactcg 18799000  T
Q  493 gtaaa 497  Q
    |||||    
T  18799001 gtaaa 18799005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 353 - 477
Target Start/End: Complemental strand, 25831038 - 25830914
Alignment:
Q  353 caatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggta 452  Q
    |||||| || |||||||||||||||||||||||| |||  |||||||| |||||||||||||||||||||||||||  ||| |||| |||  | ||  ||    
T  25831038 caatgttccacaaatcgagtgttaactctccgagattaccgagtttacgtttttaggtacaaaaatcgtgttaactctgagataaaatcggttcctaata 25830939  T
Q  453 aaatcggaaggtttgacgagtttga 477  Q
    |||| ||||||||| ||||||||||    
T  25830938 aaattggaaggtttaacgagtttga 25830914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 353 - 497
Target Start/End: Original strand, 26757597 - 26757741
Alignment:
Q  353 caatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggta 452  Q
    |||||| || ||||||| |||| |||||  ||||||||  |||||||| | ||||||| | |||| || |||||||  ||||||||||||| ||||||||    
T  26757597 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgagttaactcagaggtaaactcgatttctggta 26757696  T
Q  453 aaatcggaaggtttgacgagtttgatcgagatagcactcggtaaa 497  Q
    ||||||||| ||||||||||||||| |||| || ||||| |||||    
T  26757697 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaa 26757741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 351 - 482
Target Start/End: Complemental strand, 49237107 - 49236976
Alignment:
Q  351 agcaatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctgg 450  Q
    |||||||| ||| ||||||||||||||  || ||||||||| |||||||  | ||||||||| |||| |||||||| | |||| ||| ||||  ||||||    
T  49237107 agcaatgttccgtaaatcgagtgttaatacttcgagtttatcgagtttatgtgtttaggtaccaaaaccgtgttaattcggagttaagctcggtttctgg 49237008  T
Q  451 taaaatcggaaggtttgacgagtttgatcgag 482  Q
    |||||||| |||||||||||||||||| ||||    
T  49237007 taaaatcgaaaggtttgacgagtttgaccgag 49236976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 353 - 475
Target Start/End: Original strand, 3593237 - 3593350
Alignment:
Q  353 caatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggta 452  Q
    |||||| |||||||||||||||||||||||||||||||||         ||||||||||  ||||||||||||||| ||||||||| |||| ||||  ||    
T  3593237 caatgttccgcaaatcgagtgttaactctccgagtttata---------tttttaggtatcaaaatcgtgttaactcggaggtaaattcgatttctaata 3593327  T
Q  453 aaatcggaaggtttgacgagttt 475  Q
    ||||||||||||||||| |||||    
T  3593328 aaatcggaaggtttgacaagttt 3593350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 364 - 477
Target Start/End: Complemental strand, 27257986 - 27257873
Alignment:
Q  364 aaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggtaaaatcggaagg 463  Q
    ||||| ||||||||||| |||||||||  || ||||| ||||||||||| |||||||||| ||||  |||||||||| || ||  ||||||||||||| |    
T  27257986 aaatctagtgttaactcgccgagtttaatgaatttacgtttttaggtaccaaaatcgtgtcaactccgaggtaaacttgattttcggtaaaatcggaatg 27257887  T
Q  464 tttgacgagtttga 477  Q
    ||||||||||||||    
T  27257886 tttgacgagtttga 27257873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 361 - 477
Target Start/End: Complemental strand, 48177224 - 48177107
Alignment:
Q  361 cgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactc-gacttctggtaaaatcgg 459  Q
    |||||||||||| ||||||||| ||| |||  |||||||| |||||||||| ||||||||||||||||  |||||||| || |  |||||||||||| ||    
T  48177224 cgcaaatcgagtattaactctctgagattactgagtttacgtttttaggtagaaaaatcgtgttaactctgaggtaaaatcggttttctggtaaaattgg 48177125  T
Q  460 aaggtttgacgagtttga 477  Q
    ||||||| ||||||||||    
T  48177124 aaggtttaacgagtttga 48177107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 393 - 477
Target Start/End: Original strand, 49231456 - 49231540
Alignment:
Q  393 gagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggtaaaatcggaaggtttgacgagtttga 477  Q
    |||||||  |||||||||||||||||||||||||||  ||||||||||||  |||||||| ||||||||||||| ||||||||||    
T  49231456 gagtttatgtttttaggtacaaaaatcgtgttaactctgaggtaaactcggtttctggtataatcggaaggtttaacgagtttga 49231540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 354 - 477
Target Start/End: Complemental strand, 49971734 - 49971610
Alignment:
Q  354 aatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggtaa 453  Q
    ||||| || |||||||| ||||||||  | |||||||  |||||||| ||||||||||| |||||||||| |||| |||||||||||||  |||||||||    
T  49971734 aatgttccacaaatcgaatgttaacttactgagtttaccgagtttacgtttttaggtaccaaaatcgtgtcaactcggaggtaaactcgttttctggtaa 49971635  T
Q  454 aatcggaaggt-ttgacgagtttga 477  Q
    ||||| || || |||||||||||||    
T  49971634 aatcgaaatgtgttgacgagtttga 49971610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 364 - 477
Target Start/End: Original strand, 25253486 - 25253599
Alignment:
Q  364 aaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggtaaaatcggaagg 463  Q
    |||||||||||||| |||| |||||||  |||||||  ||||||||||| |||||||||||||    |||||||| |||  |||||||||| |||||||     
T  25253486 aaatcgagtgttaattctctgagtttaccgagtttatgtttttaggtaccaaaatcgtgttaatactgaggtaaattcggtttctggtaaactcggaaga 25253585  T
Q  464 tttgacgagtttga 477  Q
    ||||||||||||||    
T  25253586 tttgacgagtttga 25253599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 393 - 497
Target Start/End: Complemental strand, 11579199 - 11579095
Alignment:
Q  393 gagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggtaaaatcggaaggtttgacgagtttgatcgagatagcactcg 492  Q
    |||||||| | ||||||| | |||| |||||||||| ||||||||| | || ||||||||||||||||| ||||||||||||||| |||| || |||||     
T  11579199 gagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaatttgatttctggtaaaatcggaaagtttgacgagtttgaccgagttaacactca 11579100  T
Q  493 gtaaa 497  Q
    |||||    
T  11579099 gtaaa 11579095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 393 - 491
Target Start/End: Complemental strand, 32760198 - 32760100
Alignment:
Q  393 gagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggtaaaatcggaaggtttgacgagtttgatcgagatagcactc 491  Q
    |||||||| ||||||||||| |||||||||||||||  ||||||||||||  |||| |||||||||| ||| || |||||||||| |||| || |||||    
T  32760198 gagtttacgtttttaggtaccaaaatcgtgttaactctgaggtaaactcggtttctagtaaaatcgggaggcttaacgagtttgaccgagttaacactc 32760100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 393 - 482
Target Start/End: Original strand, 7798522 - 7798611
Alignment:
Q  393 gagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggtaaaatcggaaggtttgacgagtttgatcgag 482  Q
    |||||||| |||||||||   |||| |||||||||| |||||||||||||  || |||| ||||||||| ||||||||||||||| ||||    
T  7798522 gagtttacgtttttaggtggcaaaaacgtgttaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgag 7798611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 364 - 477
Target Start/End: Original strand, 15927292 - 15927405
Alignment:
Q  364 aaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggtaaaatcggaagg 463  Q
    ||||||||||||||  ||  |||||||| |||||||  | |||| |||| ||||| |||||||||  |||||||| |||  ||||| ||||||||||| |    
T  15927292 aaatcgagtgttaatactttgagtttatcgagtttaagtgtttaagtaccaaaattgtgttaactctgaggtaaattcggtttctgataaaatcggaaag 15927391  T
Q  464 tttgacgagtttga 477  Q
    ||||||||||||||    
T  15927392 tttgacgagtttga 15927405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 353 - 418
Target Start/End: Complemental strand, 28387206 - 28387141
Alignment:
Q  353 caatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaat 418  Q
    |||||| |||||||||| |||||||||||||||| |||  ||||||||||||||| ||||||||||    
T  28387206 caatgttccgcaaatcgtgtgttaactctccgagattaccgagtttacatttttatgtacaaaaat 28387141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 267 - 350
Target Start/End: Original strand, 18795124 - 18795208
Alignment:
Q  267 catcatatgatattttagtctatgtttttagttactttcattgcatttaaaggaaaataaga-gttatttagaggagttatcaat 350  Q
    |||||| ||||||||||| |||||||| |||| | |||| |||||||| ||||||||||||| || |||||||||| ||||||||    
T  18795124 catcatgtgatattttaggctatgtttctagtgattttctttgcatttgaaggaaaataagaggtcatttagaggatttatcaat 18795208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 264 - 350
Target Start/End: Original strand, 26101997 - 26102084
Alignment:
Q  264 gagcatcatatgatattttagtctatgtttttagttactttcattgcatttaaaggaaaataaga-gttatttagaggagttatcaat 350  Q
    ||||||||||||||||||||| | ||||||||||||| |||| |||||||| || | |||||||| || |||||||| | ||||||||    
T  26101997 gagcatcatatgatattttaggcgatgtttttagttattttctttgcatttgaacgcaaataagaggtcatttagagaatttatcaat 26102084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 414 - 497
Target Start/End: Complemental strand, 42304578 - 42304495
Alignment:
Q  414 aaaatcgtgttaacttggaggtaaactcgacttctggtaaaatcggaaggtttgacgagtttgatcgagatagcactcggtaaa 497  Q
    |||||| |||||| | |||||||||||||  |||||||||||| ||||||||| |||||||||| |||| || |||| ||||||    
T  42304578 aaaatcatgttaattcggaggtaaactcggtttctggtaaaattggaaggtttaacgagtttgaccgagttaacactaggtaaa 42304495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 393 - 477
Target Start/End: Original strand, 1108374 - 1108458
Alignment:
Q  393 gagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggtaaaatcggaaggtttgacgagtttga 477  Q
    |||||||| |||||||||   |||| ||||| |||| |||||||||||||  || |||| ||||||||| |||||||||||||||    
T  1108374 gagtttacgtttttaggtggtaaaaacgtgtaaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttga 1108458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 414 - 482
Target Start/End: Complemental strand, 33886938 - 33886870
Alignment:
Q  414 aaaatcgtgttaacttggaggtaaactcgacttctggtaaaatcggaaggtttgacgagtttgatcgag 482  Q
    |||| |||||||||| |||||||||||||  || |||| ||||||||| ||||||||||||||| ||||    
T  33886938 aaaaacgtgttaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgag 33886870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 414 - 482
Target Start/End: Original strand, 33957312 - 33957380
Alignment:
Q  414 aaaatcgtgttaacttggaggtaaactcgacttctggtaaaatcggaaggtttgacgagtttgatcgag 482  Q
    |||| |||||||||| |||||||||||||  || |||| ||||||||| ||||||||||||||| ||||    
T  33957312 aaaaacgtgttaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgag 33957380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 267 - 350
Target Start/End: Original strand, 31313494 - 31313579
Alignment:
Q  267 catcatatgatattttagtctatgttt-ttagttactttcattgcatttaaaggaaaataagagtt-atttagaggagttatcaat 350  Q
    |||||||||||| ||||| | |||||| ||||||| |||| |||||||| |||| ||||||||||| |||||||| |||| |||||    
T  31313494 catcatatgataatttaggccatgtttcttagttattttctttgcatttgaaggcaaataagagttcatttagagaagttgtcaat 31313579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 256 - 298
Target Start/End: Complemental strand, 12424097 - 12424056
Alignment:
Q  256 tgatgacagagcatcatatgatattttagtctatgtttttagt 298  Q
    ||||||||||||||||||||||||||| | |||||||||||||    
T  12424097 tgatgacagagcatcatatgatatttt-ggctatgtttttagt 12424056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 272 - 318
Target Start/End: Complemental strand, 34935349 - 34935303
Alignment:
Q  272 tatgatattttagtctatgtttttagttactttcattgcatttaaag 318  Q
    ||||||||||||| ||||||||||||||| |||| ||| ||||||||    
T  34935349 tatgatattttaggctatgtttttagttattttctttgaatttaaag 34935303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 256 - 296
Target Start/End: Complemental strand, 11770177 - 11770137
Alignment:
Q  256 tgatgacagagcatcatatgatattttagtctatgttttta 296  Q
    |||||| ||||||||| |||||||||| |||||||||||||    
T  11770177 tgatgatagagcatcacatgatatttttgtctatgttttta 11770137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 414 - 482
Target Start/End: Complemental strand, 34751650 - 34751582
Alignment:
Q  414 aaaatcgtgttaacttggaggtaaactcgacttctggtaaaatcggaaggtttgacgagtttgatcgag 482  Q
    |||| |||||||||| |||||||||||||  || |||| ||||||||| ||||| | ||||||| ||||    
T  34751650 aaaaacgtgttaactcggaggtaaactcggtttttggtgaaatcggaaagtttgccaagtttgaccgag 34751582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 362 - 430
Target Start/End: Original strand, 51901943 - 51902011
Alignment:
Q  362 gcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttg 430  Q
    |||||||||||||||| |||| |||| |||  ||||||  ||||||| |||  ||||||||||||||||    
T  51901943 gcaaatcgagtgttaattctctgagtctatcaagtttatgtttttagataccgaaatcgtgttaacttg 51902011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 92; Significance: 2e-44; HSPs: 42)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 350 - 497
Target Start/End: Complemental strand, 8029983 - 8029836
Alignment:
Q  350 tagcaatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctg 449  Q
    ||||||||| ||| |||||||||||||||||| ||||||||| |||||||| | ||||||||| |||||||||||||||  ||| ||||||||| |||||    
T  8029983 tagcaatgttccgtaaatcgagtgttaactcttcgagtttatcgagtttacgtgtttaggtaccaaaatcgtgttaactctgagataaactcgatttctg 8029884  T
Q  450 gtaaaatcggaaggtttgacgagtttgatcgagatagcactcggtaaa 497  Q
    |||||||||||||||||||||||||||| |||| || |||||||||||    
T  8029883 gtaaaatcggaaggtttgacgagtttgaccgagttaacactcggtaaa 8029836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 353 - 497
Target Start/End: Original strand, 31625718 - 31625862
Alignment:
Q  353 caatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggta 452  Q
    |||||| ||||||||||||||||||||||||||| |||  |||||||||||||||||||||||||| |||||||||  ||||||||||||  ||||||||    
T  31625718 caatgttccgcaaatcgagtgttaactctccgagattaccgagtttacatttttaggtacaaaaattgtgttaactctgaggtaaactcggtttctggta 31625817  T
Q  453 aaatcggaaggtttgacgagtttgatcgagatagcactcggtaaa 497  Q
    |||||||||||||| ||||||||||  ||| || |||||||||||    
T  31625818 aaatcggaaggtttaacgagtttgactgagttaacactcggtaaa 31625862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 353 - 497
Target Start/End: Complemental strand, 10295130 - 10294986
Alignment:
Q  353 caatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggta 452  Q
    |||||| ||| ||||||||||||||||||||||| |||  |||||||| ||||||||||||| |||||||||||||  ||||||||||||  ||||||||    
T  10295130 caatgttccgtaaatcgagtgttaactctccgagattaccgagtttacgtttttaggtacaacaatcgtgttaactctgaggtaaactcggtttctggta 10295031  T
Q  453 aaatcggaaggtttgacgagtttgatcgagatagcactcggtaaa 497  Q
    |||||||||||||| ||||||||||  ||| || |||||||||||    
T  10295030 aaatcggaaggtttaacgagtttgactgagttaacactcggtaaa 10294986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 353 - 497
Target Start/End: Complemental strand, 19717665 - 19717521
Alignment:
Q  353 caatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggta 452  Q
    |||||| ||||||||||||||||||||||||||| |||  ||||||||||||||||||||||||||||||||||||  |||||||| |||  ||||||||    
T  19717665 caatgttccgcaaatcgagtgttaactctccgagattaccgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggta 19717566  T
Q  453 aaatcggaaggtttgacgagtttgatcgagatagcactcggtaaa 497  Q
    |||| ||||||||| ||||| ||||  ||| || |||||||||||    
T  19717565 aaattggaaggtttaacgagattgactgagttaacactcggtaaa 19717521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 354 - 472
Target Start/End: Complemental strand, 12522646 - 12522528
Alignment:
Q  354 aatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggtaa 453  Q
    ||||| |||||||||||||||||||||||||||||||   ||||| ||||||||||||| |||||||||||||||  ||||||||||||  |||||||||    
T  12522646 aatgttccgcaaatcgagtgttaactctccgagtttactaagtttgcatttttaggtaccaaaatcgtgttaactcagaggtaaactcggtttctggtaa 12522547  T
Q  454 aatcggaaggtttgacgag 472  Q
    |||||||||||||||||||    
T  12522546 aatcggaaggtttgacgag 12522528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 353 - 497
Target Start/End: Complemental strand, 44725582 - 44725438
Alignment:
Q  353 caatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggta 452  Q
    |||||| |||||||||||||||||| |||| ||| |||| ||| ||||||||||||||||||||||||||||||||  |||||||| |||  ||||||||    
T  44725582 caatgttccgcaaatcgagtgttaaatctcagagattatcgagattacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggta 44725483  T
Q  453 aaatcggaaggtttgacgagtttgatcgagatagcactcggtaaa 497  Q
    |||| ||||||||| ||||||||||  ||| || |||||||||||    
T  44725482 aaattggaaggtttaacgagtttgactgagttaacactcggtaaa 44725438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 353 - 477
Target Start/End: Complemental strand, 9288285 - 9288161
Alignment:
Q  353 caatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggta 452  Q
    |||||| |||||||||||||||||||||| |||| |||  |||||||| |||||||||||||||||||||||||||  |||||||| |||  ||||||||    
T  9288285 caatgttccgcaaatcgagtgttaactcttcgagattaccgagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggta 9288186  T
Q  453 aaatcggaaggtttgacgagtttga 477  Q
    |||| ||||||||| ||||||||||    
T  9288185 aaattggaaggtttaacgagtttga 9288161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 353 - 477
Target Start/End: Complemental strand, 14781923 - 14781799
Alignment:
Q  353 caatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggta 452  Q
    |||||| |||||||||||||||||| |||||||| |||| ||||| ||||||||||||| ||||||||||||||||  |||||||| |||  ||||||||    
T  14781923 caatgttccgcaaatcgagtgttaaatctccgagattatcgagttgacatttttaggtataaaaatcgtgttaactctgaggtaaaatcggtttctggta 14781824  T
Q  453 aaatcggaaggtttgacgagtttga 477  Q
    |||| ||||||||| ||||||||||    
T  14781823 aaattggaaggtttaacgagtttga 14781799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 353 - 497
Target Start/End: Complemental strand, 18958518 - 18958374
Alignment:
Q  353 caatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggta 452  Q
    |||||| ||||||||||||||||||||||||||| |||  ||||||||||||||||||||||||||||||||||||  |||||||| | |  ||||||||    
T  18958518 caatgttccgcaaatcgagtgttaactctccgagattaccgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaaattggtttctggta 18958419  T
Q  453 aaatcggaaggtttgacgagtttgatcgagatagcactcggtaaa 497  Q
    |||| ||||||||| || || ||||  ||| || |||||||||||    
T  18958418 aaattggaaggtttaacaagattgactgagttaacactcggtaaa 18958374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 363 - 497
Target Start/End: Original strand, 26856525 - 26856659
Alignment:
Q  363 caaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggtaaaatcggaag 462  Q
    |||||||||||||||||||||||| |||  |||||||  ||| |||||||||||||||||||||||  ||||||||||||  ||||||||||||| ||||    
T  26856525 caaatcgagtgttaactctccgagattaccgagtttatgtttataggtacaaaaatcgtgttaactctgaggtaaactcggtttctggtaaaatcagaag 26856624  T
Q  463 gtttgacgagtttgatcgagatagcactcggtaaa 497  Q
    |||| ||||||||||  ||| || |||||||||||    
T  26856625 gtttaacgagtttgactgagttaacactcggtaaa 26856659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 361 - 497
Target Start/End: Complemental strand, 18305759 - 18305623
Alignment:
Q  361 cgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggtaaaatcgga 460  Q
    |||||||||||||||||||||||||| |||  ||| |||| |||||||||||||||||||||||||||  |||||||| |||  |||||||||||| |||    
T  18305759 cgcaaatcgagtgttaactctccgagattaccgagcttacgtttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggtaaaattgga 18305660  T
Q  461 aggtttgacgagtttgatcgagatagcactcggtaaa 497  Q
    |||||| | ||||||||  ||| || |||||||||||    
T  18305659 aggtttaaagagtttgactgagttaacactcggtaaa 18305623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 361 - 497
Target Start/End: Original strand, 32497959 - 32498095
Alignment:
Q  361 cgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggtaaaatcgga 460  Q
    ||||||| |||||||||||||||||| |||  |||||||| |||||||||||||||||||||||||||  ||||||||||||  |||| |||||||||||    
T  32497959 cgcaaattgagtgttaactctccgagattaccgagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaactcggtttctagtaaaatcgga 32498058  T
Q  461 aggtttgacgagtttgatcgagatagcactcggtaaa 497  Q
    |||||| |||  |||||| ||| || |||| ||||||    
T  32498059 aggtttaacggatttgattgagttaacactaggtaaa 32498095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 353 - 477
Target Start/End: Original strand, 16364116 - 16364240
Alignment:
Q  353 caatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggta 452  Q
    |||||| ||||||||||||||||||||||  ||| |||| || ||||| |||||||||||||||||||||||||||   ||||||| |||  |||| |||    
T  16364116 caatgttccgcaaatcgagtgttaactctatgagattatcgaatttacgtttttaggtacaaaaatcgtgttaactctaaggtaaattcggtttctagta 16364215  T
Q  453 aaatcggaaggtttgacgagtttga 477  Q
    |||||||||||||| ||||||||||    
T  16364216 aaatcggaaggtttaacgagtttga 16364240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 353 - 497
Target Start/End: Complemental strand, 39467309 - 39467165
Alignment:
Q  353 caatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggta 452  Q
    |||||| ||||||||||||||||||||||||||| |||  | |||||| |||||||||||||||||||| ||||||   ||||||| | || ||||||||    
T  39467309 caatgttccgcaaatcgagtgttaactctccgagattaccgcgtttacgtttttaggtacaaaaatcgtattaactctaaggtaaaattgatttctggta 39467210  T
Q  453 aaatcggaaggtttgacgagtttgatcgagatagcactcggtaaa 497  Q
    |||| |||||||||  |||||||||  ||| || |||||||||||    
T  39467209 aaattggaaggtttagcgagtttgactgagttaacactcggtaaa 39467165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 353 - 477
Target Start/End: Complemental strand, 42305395 - 42305271
Alignment:
Q  353 caatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggta 452  Q
    |||||| || |||||||||||||||||||||||| |||  |||||||| |||||||||| ||||||||||||||||  |||||||| |||  ||||||||    
T  42305395 caatgttccacaaatcgagtgttaactctccgagattaccgagtttacctttttaggtataaaaatcgtgttaactctgaggtaaaatcggtttctggta 42305296  T
Q  453 aaatcggaaggtttgacgagtttga 477  Q
    |||| ||||||||| ||||| ||||    
T  42305295 aaattggaaggtttaacgagattga 42305271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 352 - 477
Target Start/End: Complemental strand, 6388266 - 6388141
Alignment:
Q  352 gcaatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggt 451  Q
    ||||||| |||||||| ||||| |||||| |||||||||| || ||||  ||||||||||| ||||||||||||||| ||||||||||||   || ||||    
T  6388266 gcaatgttccgcaaattgagtggtaactcgccgagtttatcgaatttatgtttttaggtaccaaaatcgtgttaactcggaggtaaactctgtttatggt 6388167  T
Q  452 aaaatcggaaggtttgacgagtttga 477  Q
    |||||||||| ||||||| |||||||    
T  6388166 aaaatcggaaagtttgacaagtttga 6388141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 353 - 497
Target Start/End: Original strand, 19484176 - 19484320
Alignment:
Q  353 caatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggta 452  Q
    |||||| || ||||||| |||| |||||  ||||||||  |||||||  | ||||||| | |||| |||||||||| |||||||||||||| ||||||||    
T  19484176 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttatgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctggta 19484275  T
Q  453 aaatcggaaggtttgacgagtttgatcgagatagcactcggtaaa 497  Q
    ||||||||| ||||||||||||||| |||| || ||||| |||||    
T  19484276 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaa 19484320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 393 - 477
Target Start/End: Complemental strand, 37131386 - 37131302
Alignment:
Q  393 gagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggtaaaatcggaaggtttgacgagtttga 477  Q
    |||||||||||||||||||| |||||||||| |||| |||||||||||||||||||||||||||| ||| |||||| ||||||||    
T  37131386 gagtttacatttttaggtaccaaaatcgtgtcaactcggaggtaaactcgacttctggtaaaatcagaatgtttgaagagtttga 37131302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 353 - 497
Target Start/End: Complemental strand, 43166467 - 43166323
Alignment:
Q  353 caatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggta 452  Q
    |||||| |||||||||||||||||| | | |||| |||  |||||||| |||||||||||||||||||||||||||  |||||||| |    ||||||||    
T  43166467 caatgttccgcaaatcgagtgttaatttttcgagattaccgagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaaataagtttctggta 43166368  T
Q  453 aaatcggaaggtttgacgagtttgatcgagatagcactcggtaaa 497  Q
    |||| | ||||||||||||||||||  ||| || |||||||||||    
T  43166367 aaattgaaaggtttgacgagtttgactgagttaacactcggtaaa 43166323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 360 - 497
Target Start/End: Complemental strand, 43308292 - 43308155
Alignment:
Q  360 ccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggtaaaatcgg 459  Q
    |||||||||||||||||||||| |||| |||| |||||| | ||||||||||| |||||||||||||||  ||  |||| |||  |||||||||||| ||    
T  43308292 ccgcaaatcgagtgttaactcttcgagattatcgagtttgcgtttttaggtaccaaaatcgtgttaactctgatataaaatcggtttctggtaaaattgg 43308193  T
Q  460 aaggtttgacgagtttgatcgagatagcactcggtaaa 497  Q
    ||||||| || |||||||  ||| || |||||||||||    
T  43308192 aaggtttaacaagtttgactgagttaacactcggtaaa 43308155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 363 - 477
Target Start/End: Original strand, 17234685 - 17234799
Alignment:
Q  363 caaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggtaaaatcggaag 462  Q
    |||||||| ||||||||| | |||||||   ||||| | ||||||||||| |||||| | | |||| |||||||||||||| |||||||||||||||||     
T  17234685 caaatcgaatgttaactcgctgagtttaccaagtttgcgtttttaggtaccaaaatcctatcaactcggaggtaaactcgatttctggtaaaatcggaat 17234784  T
Q  463 gtttgacgagtttga 477  Q
    |||||||||||||||    
T  17234785 gtttgacgagtttga 17234799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 404 - 492
Target Start/End: Complemental strand, 27878723 - 27878635
Alignment:
Q  404 tttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggtaaaatcggaaggtttgacgagtttgatcgagatagcactcg 492  Q
    ||||||||| ||||||||||||||| ||| ||||| |||  ||||||||||||||| |||||||||||||||||| ||| || ||||||    
T  27878723 tttaggtaccaaaatcgtgttaactcggatgtaaattcggtttctggtaaaatcggtaggtttgacgagtttgatagagttaacactcg 27878635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 404 - 492
Target Start/End: Complemental strand, 28018904 - 28018816
Alignment:
Q  404 tttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggtaaaatcggaaggtttgacgagtttgatcgagatagcactcg 492  Q
    ||||||||| ||||||||||||||| ||| ||||| |||  ||||||||||||||| |||||||||||||||||| ||| || ||||||    
T  28018904 tttaggtaccaaaatcgtgttaactcggatgtaaattcggtttctggtaaaatcggtaggtttgacgagtttgatagagttaacactcg 28018816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 393 - 474
Target Start/End: Original strand, 24067107 - 24067188
Alignment:
Q  393 gagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggtaaaatcggaaggtttgacgagtt 474  Q
    |||||||| ||||||||||| |||||||||| |||| |||||| ||||| | ||||||||||||||| | ||||||||||||    
T  24067107 gagtttacgtttttaggtaccaaaatcgtgtcaactcggaggtgaactcaatttctggtaaaatcggcatgtttgacgagtt 24067188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 393 - 497
Target Start/End: Complemental strand, 26620445 - 26620341
Alignment:
Q  393 gagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggtaaaatcggaaggtttgacgagtttgatcgagatagcactcg 492  Q
    ||||||| |||||||| ||   ||||||||||||||||| |||||| ||   ||||| |||||||| || |||||||||||||||||||| || ||||||    
T  26620445 gagtttatatttttagatatcgaaatcgtgttaacttggtggtaaattcagtttctgataaaatcgaaaagtttgacgagtttgatcgagttaacactcg 26620346  T
Q  493 gtaaa 497  Q
     ||||    
T  26620345 ataaa 26620341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 354 - 477
Target Start/End: Original strand, 7760770 - 7760893
Alignment:
Q  354 aatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggtaa 453  Q
    ||||| || |||||||||||||||||   ||||||||  ||||||| |||||||||||  |||||||||| |||| | ||||||| | || ||||| |||    
T  7760770 aatgttccacaaatcgagtgttaacttatcgagtttactgagtttatatttttaggtatcaaaatcgtgtcaactcgaaggtaaatttgatttctgataa 7760869  T
Q  454 aatcggaaggtttgacgagtttga 477  Q
    ||||  |  |||||||||||||||    
T  7760870 aatcaaattgtttgacgagtttga 7760893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 394 - 497
Target Start/End: Original strand, 41393958 - 41394061
Alignment:
Q  394 agtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggtaaaatcggaaggtttgacgagtttgatcgagatagcactcgg 493  Q
    ||||||| ||||||||||  ||||||||||||| | ||||||||||||   ||||| |||||||| |||||||||| | ||||||||   || |||||||    
T  41393958 agtttacgtttttaggtatcaaaatcgtgttaattcggaggtaaactcagtttctgataaaatcgaaaggtttgacaaatttgatcgtattaacactcgg 41394057  T
Q  494 taaa 497  Q
    ||||    
T  41394058 taaa 41394061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 404 - 492
Target Start/End: Complemental strand, 27915667 - 27915579
Alignment:
Q  404 tttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggtaaaatcggaaggtttgacgagtttgatcgagatagcactcg 492  Q
    |||| |||| |||||||||||||||  ||  |||| |||| ||||| ||||||||| ||||||||||||||||| |||| || ||||||    
T  27915667 tttatgtaccaaaatcgtgttaactcagatttaaattcgatttctgataaaatcggtaggtttgacgagtttgaccgagttaacactcg 27915579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 404 - 492
Target Start/End: Complemental strand, 27962086 - 27961998
Alignment:
Q  404 tttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggtaaaatcggaaggtttgacgagtttgatcgagatagcactcg 492  Q
    |||| |||| |||||||||||||||  ||  |||| |||| ||||| ||||||||| ||||||||||||||||| |||| || ||||||    
T  27962086 tttatgtaccaaaatcgtgttaactcagatttaaattcgatttctgataaaatcggtaggtttgacgagtttgaccgagttaacactcg 27961998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 267 - 350
Target Start/End: Original strand, 29291714 - 29291798
Alignment:
Q  267 catcatatgatattttagtctatgtttttagttactttcattgcatttaaaggaaaataag-agttatttagaggagttatcaat 350  Q
    |||||||||||||||||| |||||||||| |||| |||| || ||||| |||| |||| || ||| || ||||||||||||||||    
T  29291714 catcatatgatattttaggctatgttttttgttattttcttttcatttgaaggcaaattagaagtcatatagaggagttatcaat 29291798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 393 - 475
Target Start/End: Original strand, 41252165 - 41252247
Alignment:
Q  393 gagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggtaaaatcggaaggtttgacgagttt 475  Q
    |||||||| |||||||||   |||| |||||||||| ||| |||||||||| || || | ||||||||| |||||||||||||    
T  41252165 gagtttacttttttaggtggcaaaaacgtgttaactcggaagtaaactcgatttttgatgaaatcggaaagtttgacgagttt 41252247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 393 - 477
Target Start/End: Original strand, 7466771 - 7466855
Alignment:
Q  393 gagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggtaaaatcggaaggtttgacgagtttga 477  Q
    |||||||  |||||| ||||||||||||||||||||  |||||||| ||   ||||| |||||| |||||| || ||||||||||    
T  7466771 gagtttatgtttttaagtacaaaaatcgtgttaactctgaggtaaaatcagtttctgataaaattggaaggcttaacgagtttga 7466855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 264 - 342
Target Start/End: Complemental strand, 13530280 - 13530201
Alignment:
Q  264 gagcatcatatgatattttagtctatgtttttagttactttcattgcatttaaaggaaaataaga-gttatttagaggag 342  Q
    |||||||||||||| |||||| |||||||||||||||  ||| ||||| || |||  |||||||| || |||||||||||    
T  13530280 gagcatcatatgatgttttaggctatgtttttagttatattctttgcaattgaagacaaataagaggtcatttagaggag 13530201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 264 - 342
Target Start/End: Complemental strand, 13619819 - 13619740
Alignment:
Q  264 gagcatcatatgatattttagtctatgtttttagttactttcattgcatttaaaggaaaataaga-gttatttagaggag 342  Q
    |||||||||||||| |||||| |||||||||||||||  ||| ||||| || |||  |||||||| || |||||||||||    
T  13619819 gagcatcatatgatgttttaggctatgtttttagttatattctttgcaattgaagacaaataagaggtcatttagaggag 13619740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 268 - 350
Target Start/End: Original strand, 31436423 - 31436506
Alignment:
Q  268 atcatatgatattttagtctatgtttttagttactttcattgcatttaaaggaaaataaga-gttatttagaggagttatcaat 350  Q
    ||||||||||||||||  |||| |||||||||| |||   ||||||| |||| |||||||| || ||||||||||||| |||||    
T  31436423 atcatatgatattttatactatatttttagttattttatctgcatttgaaggcaaataagatgtaatttagaggagttgtcaat 31436506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 402 - 477
Target Start/End: Complemental strand, 33177938 - 33177863
Alignment:
Q  402 tttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggtaaaatcggaaggtttgacgagtttga 477  Q
    ||||||||||| ||||  ||||||| ||| |||||||||||| || |||| |||| | || |||||||||||||||    
T  33177938 tttttaggtaccaaaaatgtgttaatttgaaggtaaactcgatttttggtgaaattgaaatgtttgacgagtttga 33177863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 414 - 476
Target Start/End: Complemental strand, 1527983 - 1527921
Alignment:
Q  414 aaaatcgtgttaacttggaggtaaactcgacttctggtaaaatcggaaggtttgacgagtttg 476  Q
    |||| |||||||||| |||||||||||||| || |||| ||||||||| ||| ||| ||||||    
T  1527983 aaaaacgtgttaactcggaggtaaactcgatttttggtgaaatcggaatgttggacaagtttg 1527921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 256 - 298
Target Start/End: Complemental strand, 16052460 - 16052418
Alignment:
Q  256 tgatgacagagcatcatatgatattttagtctatgtttttagt 298  Q
    ||||||| ||||||||||||||||||| | |||||||||||||    
T  16052460 tgatgacggagcatcatatgatatttttggctatgtttttagt 16052418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 363 - 469
Target Start/End: Original strand, 24082183 - 24082289
Alignment:
Q  363 caaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggtaaaatcggaag 462  Q
    ||||| ||||||||||||  ||||||||   ||||||   |||||||||| ||||| |||||||    |||||||| |||  |||||||||||||| |||    
T  24082183 caaattgagtgttaactcgacgagtttactaagtttatgattttaggtaccaaaattgtgttaatactgaggtaaattcggtttctggtaaaatcgaaag 24082282  T
Q  463 gtttgac 469  Q
    |||||||    
T  24082283 gtttgac 24082289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 425 - 482
Target Start/End: Complemental strand, 28317139 - 28317082
Alignment:
Q  425 aacttggaggtaaactcgacttctggtaaaatcggaaggtttgacgagtttgatcgag 482  Q
    |||| |||||||||||||| || |||| |||||| || ||||||||||||||| ||||    
T  28317139 aactcggaggtaaactcgatttttggtgaaatcgaaaagtttgacgagtttgaccgag 28317082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 256 - 327
Target Start/End: Complemental strand, 11310387 - 11310316
Alignment:
Q  256 tgatgacagagcatcatatgatattttagtctatgtttttagttactt-tcattgcatttaaaggaaaataag 327  Q
    |||| ||||||||||||||||||||||   |||||||||||| ||||| || |||||||| ||| ||||||||    
T  11310387 tgataacagagcatcatatgatattttttgctatgtttttag-tacttatctttgcatttgaagaaaaataag 11310316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 445 - 497
Target Start/End: Complemental strand, 12522481 - 12522429
Alignment:
Q  445 ttctggtaaaatcggaaggtttgacgagtttgatcgagatagcactcggtaaa 497  Q
    |||||||||||| | |||||||||||||||||| |||| || |||| ||||||    
T  12522481 ttctggtaaaattgaaaggtttgacgagtttgaccgagttaacacttggtaaa 12522429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 89; Significance: 1e-42; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 353 - 497
Target Start/End: Original strand, 39852780 - 39852924
Alignment:
Q  353 caatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggta 452  Q
    |||||| ||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||  |||||||| |||| || |||||    
T  39852780 caatgttccgcaaatcgagtgttaactctccgagattatcgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcgatttttggta 39852879  T
Q  453 aaatcggaaggtttgacgagtttgatcgagatagcactcggtaaa 497  Q
    |||| ||||||||| ||||||||||  ||| || |||||||||||    
T  39852880 aaattggaaggtttaacgagtttgacggagttaacactcggtaaa 39852924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 353 - 497
Target Start/End: Complemental strand, 13999886 - 13999742
Alignment:
Q  353 caatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggta 452  Q
    |||||| |||||||||||||||||| |||||||| |||| ||||| ||||||||||||||||||||||||||||||| ||| |||| |||  ||||||||    
T  13999886 caatgttccgcaaatcgagtgttaaatctccgagattatggagttgacatttttaggtacaaaaatcgtgttaactttgagataaaatcggtttctggta 13999787  T
Q  453 aaatcggaaggtttgacgagtttgatcgagatagcactcggtaaa 497  Q
    |||| ||||||||| ||||||||||  ||| || |||||||||||    
T  13999786 aaattggaaggtttaacgagtttgactgagttaacactcggtaaa 13999742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 361 - 497
Target Start/End: Original strand, 37014272 - 37014408
Alignment:
Q  361 cgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggtaaaatcgga 460  Q
    |||||||||||||||||||||||||| |||  ||||||||||||||||||||||||||||||||||||  |||||||| |||  |||||||||||| | |    
T  37014272 cgcaaatcgagtgttaactctccgagattaccgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggtaaaattgaa 37014371  T
Q  461 aggtttgacgagtttgatcgagatagcactcggtaaa 497  Q
    |||||| |||||||||| |||| || |||||||||||    
T  37014372 aggtttaacgagtttgaccgagttaacactcggtaaa 37014408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 353 - 497
Target Start/End: Original strand, 13926341 - 13926485
Alignment:
Q  353 caatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggta 452  Q
    |||||| ||||||||||||||||||||||||||| |||| |||||||| |||||||||||||||||||||||||||  |||||||| |||  ||||||||    
T  13926341 caatgttccgcaaatcgagtgttaactctccgagattatcgagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggta 13926440  T
Q  453 aaatcggaaggtttgacgagtttgatcgagatagcactcggtaaa 497  Q
    |||| ||||||||| | ||||||||   || || |||||||||||    
T  13926441 aaattggaaggtttaaggagtttgactaagttaacactcggtaaa 13926485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 353 - 497
Target Start/End: Complemental strand, 1460938 - 1460794
Alignment:
Q  353 caatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggta 452  Q
    |||||| ||||||||||||||||||||||  ||| |||  |||||||| ||||||||||||||||| |||||||||  ||||||||||||  ||||||||    
T  1460938 caatgttccgcaaatcgagtgttaactctttgagattaccgagtttacgtttttaggtacaaaaattgtgttaactcagaggtaaactcggtttctggta 1460839  T
Q  453 aaatcggaaggtttgacgagtttgatcgagatagcactcggtaaa 497  Q
    ||||||||||| || ||||||||||  ||| || |||||||||||    
T  1460838 aaatcggaaggcttaacgagtttgactgagttaacactcggtaaa 1460794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 353 - 477
Target Start/End: Complemental strand, 4550050 - 4549926
Alignment:
Q  353 caatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggta 452  Q
    |||||| ||||||||||||||||||||||||||| |||  |||||||| | |||||||||||||||||||||||||  |||||||| |||  ||||||||    
T  4550050 caatgttccgcaaatcgagtgttaactctccgagattaccgagtttacgtgtttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggta 4549951  T
Q  453 aaatcggaaggtttgacgagtttga 477  Q
    |||| ||||||||| ||||||||||    
T  4549950 aaattggaaggtttaacgagtttga 4549926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 353 - 497
Target Start/End: Complemental strand, 5651327 - 5651183
Alignment:
Q  353 caatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggta 452  Q
    |||||| ||||||||||||||||||| || ||||||||| || ||||| | ||||||||| ||||||||||||||| |||||||||||||| |||||||     
T  5651327 caatgttccgcaaatcgagtgttaacacttcgagtttatcgattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtg 5651228  T
Q  453 aaatcggaaggtttgacgagtttgatcgagatagcactcggtaaa 497  Q
    |||| | || ||||||||||||||| |||| || ||||| |||||    
T  5651227 aaattgaaaagtttgacgagtttgaccgagttaacactcagtaaa 5651183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 353 - 497
Target Start/End: Original strand, 5949522 - 5949665
Alignment:
Q  353 caatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggta 452  Q
    |||||| ||||||||||||| ||||||||||||| ||||  ||||||| |||||||||||||||||||||||||||  |||||||| |||  ||||||||    
T  5949522 caatgttccgcaaatcgagtattaactctccgagattatc-agtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggta 5949620  T
Q  453 aaatcggaaggtttgacgagtttgatcgagatagcactcggtaaa 497  Q
    |||| ||||||||| ||||||||||  ||| || |||||||||||    
T  5949621 aaattggaaggtttaacgagtttgactgagttaacactcggtaaa 5949665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 353 - 497
Target Start/End: Complemental strand, 4240258 - 4240114
Alignment:
Q  353 caatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggta 452  Q
    |||||| |||||||| |||||||||||||| ||| |||  |||||||| ||||||||| |||||||||||||||||  |||||||||||   ||||||||    
T  4240258 caatgttccgcaaattgagtgttaactctctgagattaccgagtttacgtttttaggtgcaaaaatcgtgttaactctgaggtaaactccgtttctggta 4240159  T
Q  453 aaatcggaaggtttgacgagtttgatcgagatagcactcggtaaa 497  Q
    |||||||||||||| ||||||||||   || || |||||||||||    
T  4240158 aaatcggaaggtttaacgagtttgacaaagttaacactcggtaaa 4240114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 364 - 480
Target Start/End: Complemental strand, 29716920 - 29716804
Alignment:
Q  364 aaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggtaaaatcggaagg 463  Q
    |||||||||||||||||||| ||||||  |||||||| ||||||||||  ||||||||||||||| | ||||||||| || ||||||||||||| |||||    
T  29716920 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaacttgatttctggtaaaatcagaagg 29716821  T
Q  464 tttgacgagtttgatcg 480  Q
    ||||||||||| |||||    
T  29716820 tttgacgagttggatcg 29716804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 354 - 497
Target Start/End: Complemental strand, 40013496 - 40013353
Alignment:
Q  354 aatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggtaa 453  Q
    ||||| ||||||||||||||||||||||||||| |||  ||||||||||||||| ||| ||||||||||||||||  |||||||| |||  |||||||||    
T  40013496 aatgttccgcaaatcgagtgttaactctccgagattaccgagtttacatttttaagtataaaaatcgtgttaactctgaggtaaaatcggtttctggtaa 40013397  T
Q  454 aatcggaaggtttgacgagtttgatcgagatagcactcggtaaa 497  Q
    ||| ||||||||| || || ||||  ||| || |||||||||||    
T  40013396 aattggaaggtttaacaagattgactgagttaacactcggtaaa 40013353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 353 - 497
Target Start/End: Complemental strand, 7125305 - 7125161
Alignment:
Q  353 caatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggta 452  Q
    |||||| || ||||||| |||| |||||  ||||||||  |||||||| | ||||||| | |||| |||||||||| |||||||||||||| ||||||||    
T  7125305 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctggta 7125206  T
Q  453 aaatcggaaggtttgacgagtttgatcgagatagcactcggtaaa 497  Q
    ||||||||| ||||||||||||||| |||| || ||||| |||||    
T  7125205 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaa 7125161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 351 - 477
Target Start/End: Complemental strand, 16548987 - 16548861
Alignment:
Q  351 agcaatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctgg 450  Q
    |||||||| ||  |||||||||||||||||   |||||||| |||||||| ||||||||||| |||||||||| |||| |||||||||||| | ||||||    
T  16548987 agcaatgttccataaatcgagtgttaactcattgagtttatcgagtttacgtttttaggtaccaaaatcgtgtcaactcggaggtaaactcaatttctgg 16548888  T
Q  451 taaaatcggaaggtttgacgagtttga 477  Q
    |||||||| || ||||||||| |||||    
T  16548887 taaaatcgaaatgtttgacgaatttga 16548861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 353 - 497
Target Start/End: Complemental strand, 28623307 - 28623163
Alignment:
Q  353 caatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggta 452  Q
    |||||| || ||||||| |||| |||||  ||||||||| |||||||| | ||||||| | |||| |||||||||| |||| ||||||||| ||||||||    
T  28623307 caatgttccacaaatcgcgtgtcaactcagcgagtttatcgagtttacgtgtttaggtgctaaaaacgtgttaactcggagataaactcgatttctggta 28623208  T
Q  453 aaatcggaaggtttgacgagtttgatcgagatagcactcggtaaa 497  Q
    |||| | || ||||||||||||||| |||| || ||||| |||||    
T  28623207 aaattgcaaagtttgacgagtttgaccgagttaacactcagtaaa 28623163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 354 - 469
Target Start/End: Original strand, 21489862 - 21489977
Alignment:
Q  354 aatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggtaa 453  Q
    ||||| || ||||||||||||||||| | | ||||||| || ||||||||||||||||| |||||||||| || | | || |||||| || |||||||||    
T  21489862 aatgttccacaaatcgagtgttaacttttcaagtttattgattttacatttttaggtaccaaaatcgtgtcaattcgaagataaacttgatttctggtaa 21489961  T
Q  454 aatcggaaggtttgac 469  Q
    |||| ||| |||||||    
T  21489962 aatctgaatgtttgac 21489977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 364 - 477
Target Start/End: Original strand, 29758678 - 29758790
Alignment:
Q  364 aaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggtaaaatcggaagg 463  Q
    |||| ||||||||||||    ||||||| |||||||| ||||||||||  ||||||||||||||| ||||||| | | || ||||||| ||||||||| |    
T  29758678 aaattgagtgttaactcgttaagtttatcgagtttacgtttttaggtatcaaaatcgtgttaactcggaggtagatttgatttctggt-aaatcggaatg 29758776  T
Q  464 tttgacgagtttga 477  Q
    ||||||||||||||    
T  29758777 tttgacgagtttga 29758790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 363 - 469
Target Start/End: Complemental strand, 15672811 - 15672705
Alignment:
Q  363 caaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggtaaaatcggaag 462  Q
    |||||| ||||||||||| |||||||||  |||||||  ||||||||||| |||||||||| ||||   || |||||| || || ||||||||||||||     
T  15672811 caaatcaagtgttaactcgccgagtttactgagtttatgtttttaggtactaaaatcgtgtcaactcaaagataaacttgatttatggtaaaatcggaat 15672712  T
Q  463 gtttgac 469  Q
    |||||||    
T  15672711 gtttgac 15672705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 393 - 482
Target Start/End: Complemental strand, 2675174 - 2675085
Alignment:
Q  393 gagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggtaaaatcggaaggtttgacgagtttgatcgag 482  Q
    |||||||| |||||||||   |||| |||||||||| |||||||||||||| || |||| |||||| || ||||||||||||||| ||||    
T  2675174 gagtttacgtttttaggtggcaaaaacgtgttaactcggaggtaaactcgatttttggtgaaatcgaaaagtttgacgagtttgaccgag 2675085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 360 - 469
Target Start/End: Original strand, 34218437 - 34218546
Alignment:
Q  360 ccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggtaaaatcgg 459  Q
    |||||||| |||||||||| ||| |||||||   ||||||| ||||||| ||| ||||||||||||| | | ||||||| |||  ||||| ||||||| |    
T  34218437 ccgcaaattgagtgttaacactctgagtttaccaagtttacgtttttagataccaaaatcgtgttaattcgaaggtaaattcggtttctgctaaaatcag 34218536  T
Q  460 aaggtttgac 469  Q
    ||||||||||    
T  34218537 aaggtttgac 34218546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 414 - 482
Target Start/End: Complemental strand, 21238838 - 21238770
Alignment:
Q  414 aaaatcgtgttaacttggaggtaaactcgacttctggtaaaatcggaaggtttgacgagtttgatcgag 482  Q
    |||| |||||||||| |||||||||||||  || |||||||||||||| ||||||||||||||| ||||    
T  21238838 aaaaacgtgttaactcggaggtaaactcggtttttggtaaaatcggaaagtttgacgagtttgaccgag 21238770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 414 - 497
Target Start/End: Complemental strand, 37798199 - 37798116
Alignment:
Q  414 aaaatcgtgttaacttggaggtaaactcgacttctggtaaaatcggaaggtttgacgagtttgatcgagatagcactcggtaaa 497  Q
    |||| ||||||||||   |||||||||| | |||||||||||||| || ||||||||||||||| |||| || |||||||||||    
T  37798199 aaaaacgtgttaactcaaaggtaaactcaatttctggtaaaatcgaaaagtttgacgagtttgaccgagttaacactcggtaaa 37798116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 256 - 341
Target Start/End: Original strand, 24846193 - 24846279
Alignment:
Q  256 tgatgacagagcatcatatgatattttagtctatgtttttagttactttcattgcatttaaaggaaaataaga-gttatttagagga 341  Q
    ||||||| |||||| ||||||| |||||| |||| ||||||||||||||| |||||||| |||  |||||||| || ||||||||||    
T  24846193 tgatgacggagcatgatatgatgttttaggctatatttttagttactttctttgcatttgaagacaaataagaggtcatttagagga 24846279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 396 - 482
Target Start/End: Complemental strand, 33892939 - 33892853
Alignment:
Q  396 tttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggtaaaatcggaaggtttgacgagtttgatcgag 482  Q
    ||||| |||||||||   |||| |||||||||| |||||||||||||| || || | ||||||||| ||||||||||||||| ||||    
T  33892939 tttacgtttttaggtggcaaaaacgtgttaactcggaggtaaactcgatttttgatgaaatcggaaagtttgacgagtttgaccgag 33892853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 267 - 350
Target Start/End: Original strand, 20694583 - 20694667
Alignment:
Q  267 catcatatgatattttagtctatgtttttagttactttcattgcatttaaaggaaaa-taagagttatttagaggagttatcaat 350  Q
    |||||||||||| ||||  ||||||||||||||| |||  ||||||||||||||||| ||| || ||||||||||| || |||||    
T  20694583 catcatatgatactttaagctatgtttttagttattttatttgcatttaaaggaaaattaaaagatatttagaggatttgtcaat 20694667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 267 - 350
Target Start/End: Original strand, 26070418 - 26070501
Alignment:
Q  267 catcatatgatattttagtctatgtttttagttactttcattgcatttaaaggaaaataaga-gttatttagaggagttatcaat 350  Q
    ||||||||||| |||| | ||||||||||||||| |||| |||||||| |||| |||||||| || ||||||||||||| |||||    
T  26070418 catcatatgattttttgg-ctatgtttttagttattttctttgcattttaaggcaaataagaggtcatttagaggagttgtcaat 26070501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 256 - 298
Target Start/End: Original strand, 15205577 - 15205618
Alignment:
Q  256 tgatgacagagcatcatatgatattttagtctatgtttttagt 298  Q
    ||||||||||||||||||||||||||| | |||||||||||||    
T  15205577 tgatgacagagcatcatatgatatttt-gactatgtttttagt 15205618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 256 - 298
Target Start/End: Complemental strand, 22968025 - 22967983
Alignment:
Q  256 tgatgacagagcatcatatgatattttagtctatgtttttagt 298  Q
    ||||||| ||| ||||||||||||||||| |||||||||||||    
T  22968025 tgatgacggagtatcatatgatattttaggctatgtttttagt 22967983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 420 - 482
Target Start/End: Original strand, 31913526 - 31913588
Alignment:
Q  420 gtgttaacttggaggtaaactcgacttctggtaaaatcggaaggtttgacgagtttgatcgag 482  Q
    |||||||||||||||||||||||| || |||| |||||| || ||| | ||| ||||||||||    
T  31913526 gtgttaacttggaggtaaactcgatttttggtgaaatcgaaatgttcgtcgaatttgatcgag 31913588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 272 - 352
Target Start/End: Original strand, 20083414 - 20083494
Alignment:
Q  272 tatgatattttagtctatgtttttagttactttcattgcatttaaagg-aaaataagagttatttagaggagttatcaatag 352  Q
    ||||||||||||| ||||||||||| ||| |||| |||||||| |||| ||| ||| | ||| ||||||||||| |||||||    
T  20083414 tatgatattttaggctatgtttttaattattttctttgcatttgaaggcaaattaaaaatta-ttagaggagttgtcaatag 20083494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 329
Target Start/End: Original strand, 24130595 - 24130660
Alignment:
Q  264 gagcatcatatgatattttagtctatgtttttagttactttcattgcatttaaaggaaaataagag 329  Q
    |||||| |||||||||||||| |||||||| |||||| | |  |||||||| |||| |||||||||    
T  24130595 gagcatgatatgatattttaggctatgtttatagttattgtatttgcattttaaggcaaataagag 24130660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 482
Target Start/End: Original strand, 34909593 - 34909682
Alignment:
Q  393 gagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggtaaaatcggaaggtttgacgagtttgatcgag 482  Q
    |||||||| |||||||||   |||| |||||||| | |||||||||||||   | |||| ||||||||| |||||| |||||||| ||||    
T  34909593 gagtttacgtttttaggtggcaaaaacgtgttaattcggaggtaaactcggtctttggtgaaatcggaaagtttgaggagtttgaccgag 34909682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 445 - 497
Target Start/End: Complemental strand, 1151991 - 1151939
Alignment:
Q  445 ttctggtaaaatcggaaggtttgacgagtttgatcgagatagcactcggtaaa 497  Q
    |||||||||||| ||||||||| ||||||||||  ||| || |||||||||||    
T  1151991 ttctggtaaaattggaaggtttaacgagtttgactgagttaacactcggtaaa 1151939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 254 - 298
Target Start/End: Complemental strand, 25594877 - 25594833
Alignment:
Q  254 actgatgacagagcatcatatgatattttagtctatgtttttagt 298  Q
    |||||||||||||||||||||  |||||| | |||||||||||||    
T  25594877 actgatgacagagcatcatatattatttttggctatgtttttagt 25594833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 393 - 469
Target Start/End: Original strand, 25868800 - 25868876
Alignment:
Q  393 gagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggtaaaatcggaaggtttgac 469  Q
    |||||||  |||||||||   |||| |||||||||| |||||||||||||  || |||| ||||||||| |||||||    
T  25868800 gagtttatgtttttaggtggcaaaaacgtgttaactcggaggtaaactcggtttttggtgaaatcggaaagtttgac 25868876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 256 - 300
Target Start/End: Original strand, 25942073 - 25942117
Alignment:
Q  256 tgatgacagagcatcatatgatattttagtctatgtttttagtta 300  Q
    |||||| ||||||||||| ||||| |||| |||||||||||||||    
T  25942073 tgatgagagagcatcataagatatcttagactatgtttttagtta 25942117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 89; Significance: 1e-42; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 353 - 497
Target Start/End: Complemental strand, 21386624 - 21386480
Alignment:
Q  353 caatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggta 452  Q
    |||||| || ||||||||||||||||||||||||||||  |||||||||||||||||||  |||||||||||||||| ||||||||||||| ||||||||    
T  21386624 caatgttccccaaatcgagtgttaactctccgagtttaccgagtttacatttttaggtatcaaaatcgtgttaacttagaggtaaactcgatttctggta 21386525  T
Q  453 aaatcggaaggtttgacgagtttgatcgagatagcactcggtaaa 497  Q
    |||||| || ||||||||||||||| |||| |  |||||||||||    
T  21386524 aaatcgaaaagtttgacgagtttgaccgagttgacactcggtaaa 21386480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 353 - 497
Target Start/End: Complemental strand, 51737479 - 51737335
Alignment:
Q  353 caatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggta 452  Q
    |||||| ||||||||||||||||||||||| ||| |||| ||||||||||||||||||||||||||||||||||||  ||||||||||||  |||| |||    
T  51737479 caatgttccgcaaatcgagtgttaactctctgagattatcgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaactcggtttctagta 51737380  T
Q  453 aaatcggaaggtttgacgagtttgatcgagatagcactcggtaaa 497  Q
    |||||||||||||| ||||||||||  ||| || |||||||||||    
T  51737379 aaatcggaaggtttaacgagtttgactgagttaacactcggtaaa 51737335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 353 - 497
Target Start/End: Original strand, 48379558 - 48379702
Alignment:
Q  353 caatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggta 452  Q
    |||||| ||||||||||||||||||||||||||| |||  |||||||| ||||||||||||||||||||||||| |  ||||||||||||| ||||||||    
T  48379558 caatgttccgcaaatcgagtgttaactctccgagattaccgagtttacgtttttaggtacaaaaatcgtgttaattctgaggtaaactcgatttctggta 48379657  T
Q  453 aaatcggaaggtttgacgagtttgatcgagatagcactcggtaaa 497  Q
    ||||||||||| || ||||||||||  ||| || |||||||||||    
T  48379658 aaatcggaaggcttaacgagtttgactgagttaacactcggtaaa 48379702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 353 - 497
Target Start/End: Original strand, 52810766 - 52810910
Alignment:
Q  353 caatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggta 452  Q
    |||||| ||||||||||||||||||||||||||| |||  |||||||| ||||||||||||||||| |||||||||  ||||||||||||  ||||||||    
T  52810766 caatgttccgcaaatcgagtgttaactctccgagattaccgagtttacgtttttaggtacaaaaattgtgttaactctgaggtaaactcgggttctggta 52810865  T
Q  453 aaatcggaaggtttgacgagtttgatcgagatagcactcggtaaa 497  Q
    |||||||||||||| ||||||||||  ||| || |||||||||||    
T  52810866 aaatcggaaggtttaacgagtttgactgagttaacactcggtaaa 52810910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 352 - 497
Target Start/End: Complemental strand, 4962872 - 4962727
Alignment:
Q  352 gcaatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggt 451  Q
    ||||||| |||||||| ||| ||||||||||  ||||||| |||||||| ||||||||||  |||||||||||||||||||||||||||||| |||  ||    
T  4962872 gcaatgttccgcaaattgagcgttaactctctaagtttatcgagtttacgtttttaggtatcaaaatcgtgttaacttggaggtaaactcgatttcaagt 4962773  T
Q  452 aaaatcggaaggtttgacgagtttgatcgagatagcactcggtaaa 497  Q
    ||||||| |||||||||||||||||| |||| || |||||||||||    
T  4962772 aaaatcgaaaggtttgacgagtttgaccgagttaacactcggtaaa 4962727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 360 - 497
Target Start/End: Original strand, 20833312 - 20833449
Alignment:
Q  360 ccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggtaaaatcgg 459  Q
    ||||||||||||||||||||||| ||| |||| |||||||| |||||||||||||||||||||||||||  |||||||||||   |||||||||||||||    
T  20833312 ccgcaaatcgagtgttaactctctgagattatcgagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaactcagtttctggtaaaatcgg 20833411  T
Q  460 aaggtttgacgagtttgatcgagatagcactcggtaaa 497  Q
    ||||||| ||||||||||  ||| || |||||||||||    
T  20833412 aaggtttaacgagtttgactgagttaacactcggtaaa 20833449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 353 - 497
Target Start/End: Original strand, 26107737 - 26107881
Alignment:
Q  353 caatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggta 452  Q
    |||||| |||||||||||||| |||||||||||| |||  |||||||| |||||||||||||||||| ||||||||  ||||||||||||| ||||||||    
T  26107737 caatgttccgcaaatcgagtgataactctccgagattaacgagtttacgtttttaggtacaaaaatcatgttaactctgaggtaaactcgatttctggta 26107836  T
Q  453 aaatcggaaggtttgacgagtttgatcgagatagcactcggtaaa 497  Q
     ||||||||||||| ||||||||||  ||| || |||||||||||    
T  26107837 caatcggaaggtttaacgagtttgactgagttaacactcggtaaa 26107881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 353 - 477
Target Start/End: Complemental strand, 52617764 - 52617640
Alignment:
Q  353 caatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggta 452  Q
    |||||| ||||||||||||||||||||||| ||| |||| || ||||| |||||||||||||||||||||||||||  ||||||||||||  ||||||||    
T  52617764 caatgttccgcaaatcgagtgttaactctctgagattatcgaatttacgtttttaggtacaaaaatcgtgttaactctgaggtaaactcggtttctggta 52617665  T
Q  453 aaatcggaaggtttgacgagtttga 477  Q
    |||||||||||||| ||||||||||    
T  52617664 aaatcggaaggtttaacgagtttga 52617640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 362 - 497
Target Start/End: Original strand, 33693226 - 33693361
Alignment:
Q  362 gcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggtaaaatcggaa 461  Q
    ||||||||| |||||||||||||||||||  |||||||   |||||  ||| |||||||||||||||||||||||||||||| ||||||||||||| |||    
T  33693226 gcaaatcgaatgttaactctccgagtttaccgagtttatgattttacataccaaaatcgtgttaacttggaggtaaactcgatttctggtaaaatcagaa 33693325  T
Q  462 ggtttgacgagtttgatcgagatagcactcggtaaa 497  Q
    |||||||||||||||| |||| || |||||||||||    
T  33693326 ggtttgacgagtttgaccgagttaacactcggtaaa 33693361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 355 - 477
Target Start/End: Original strand, 17946638 - 17946760
Alignment:
Q  355 atgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggtaaa 454  Q
    |||| |||||||||||||||||| |||||||| |||| |||||||| |||||||||||||||||| ||||||||  ||||||||||||  ||||||||||    
T  17946638 atgttccgcaaatcgagtgttaattctccgagattatcgagtttacgtttttaggtacaaaaatcatgttaactctgaggtaaactcggtttctggtaaa 17946737  T
Q  455 atcggaaggtttgacgagtttga 477  Q
    |||||||||||| ||||||||||    
T  17946738 atcggaaggtttaacgagtttga 17946760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 361 - 497
Target Start/End: Complemental strand, 23753173 - 23753037
Alignment:
Q  361 cgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggtaaaatcgga 460  Q
    |||||||||||||||||||||||||| |||  ||||||||||||||||||||||||||||||||||||  |||||||| |||  || ||||||||| |||    
T  23753173 cgcaaatcgagtgttaactctccgagattaccgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttttggtaaaattgga 23753074  T
Q  461 aggtttgacgagtttgatcgagatagcactcggtaaa 497  Q
    |||||| || |||||||  ||| || |||||||||||    
T  23753073 aggtttaaccagtttgactgagttaacactcggtaaa 23753037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 353 - 477
Target Start/End: Original strand, 37455255 - 37455379
Alignment:
Q  353 caatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggta 452  Q
    |||||| ||||||||||||||||||||||||||| |||  ||| |||| |||||||||||||||||||||||||||  |||||||| |||  ||||||||    
T  37455255 caatgttccgcaaatcgagtgttaactctccgagattaccgagcttacgtttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggta 37455354  T
Q  453 aaatcggaaggtttgacgagtttga 477  Q
    |||| ||||||||| ||||||||||    
T  37455355 aaattggaaggtttaacgagtttga 37455379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 353 - 497
Target Start/End: Original strand, 39038498 - 39038642
Alignment:
Q  353 caatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggta 452  Q
    |||||| || |||||||||||||||||||| ||| |||| || ||||| ||||||||||||||||| |||||||||  ||||||||||||  ||||||||    
T  39038498 caatgttccacaaatcgagtgttaactctctgagattatcgaatttacgtttttaggtacaaaaatggtgttaactctgaggtaaactcggtttctggta 39038597  T
Q  453 aaatcggaaggtttgacgagtttgatcgagatagcactcggtaaa 497  Q
    |||||||||||||| ||||||||||   || || |||||||||||    
T  39038598 aaatcggaaggtttaacgagtttgactaagttaacactcggtaaa 39038642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 361 - 497
Target Start/End: Complemental strand, 50903093 - 50902957
Alignment:
Q  361 cgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggtaaaatcgga 460  Q
    ||||| ||||||||||||||||||||  ||| |||||||| |||||| ||||||||||||||||||||  ||||||||||||  |||||||||||| |||    
T  50903093 cgcaagtcgagtgttaactctccgagaatatcgagtttacgtttttatgtacaaaaatcgtgttaactctgaggtaaactcggtttctggtaaaattgga 50902994  T
Q  461 aggtttgacgagtttgatcgagatagcactcggtaaa 497  Q
    |||||| ||||||||||  ||| || |||||||||||    
T  50902993 aggtttaacgagtttgactgagttaacactcggtaaa 50902957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 354 - 497
Target Start/End: Complemental strand, 7437710 - 7437567
Alignment:
Q  354 aatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggtaa 453  Q
    ||||| |||||||||||||||||||||||||||||||  |||||||| | ||||||||| ||||||||||||||  |||| ||||||||  || ||||||    
T  7437710 aatgttccgcaaatcgagtgttaactctccgagtttactgagtttacttgtttaggtaccaaaatcgtgttaacacggagataaactcggtttttggtaa 7437611  T
Q  454 aatcggaaggtttgacgagtttgatcgagatagcactcggtaaa 497  Q
    ||||||||||| ||  |||||||| |||| || |||||||||||    
T  7437610 aatcggaaggtatggtgagtttgaccgagttaacactcggtaaa 7437567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 353 - 478
Target Start/End: Original strand, 54629259 - 54629384
Alignment:
Q  353 caatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggta 452  Q
    |||||| |||||||| |||||||||||||| ||| |||  |||||||| |||||||||||||||||||||||||||  ||||||||||||| ||||| ||    
T  54629259 caatgttccgcaaattgagtgttaactctctgagattaccgagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaactcgatttctgata 54629358  T
Q  453 aaatcggaaggtttgacgagtttgat 478  Q
    ||| || ||||||| |||||||||||    
T  54629359 aaagcgaaaggtttaacgagtttgat 54629384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 353 - 497
Target Start/End: Original strand, 18750051 - 18750195
Alignment:
Q  353 caatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggta 452  Q
    |||||| ||||||||||||||||||||||| ||  |||  |||||||| |||||||||||||||||| ||||||||  ||||||||||||  ||||||||    
T  18750051 caatgttccgcaaatcgagtgttaactctctgatattactgagtttacgtttttaggtacaaaaatcatgttaactctgaggtaaactcggtttctggta 18750150  T
Q  453 aaatcggaaggtttgacgagtttgatcgagatagcactcggtaaa 497  Q
    |||| |||||| || ||||||||||  ||| || |||||||||||    
T  18750151 aaattggaaggcttaacgagtttgactgagttaacactcggtaaa 18750195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 361 - 497
Target Start/End: Complemental strand, 31646045 - 31645909
Alignment:
Q  361 cgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggtaaaatcgga 460  Q
    |||||||||||||||||||||||||| |||  ||| |||| |||||||||||||||||||||||||||  |||||||| |||  |||||||||||| |||    
T  31646045 cgcaaatcgagtgttaactctccgagattaccgagcttacgtttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggtaaaattgga 31645946  T
Q  461 aggtttgacgagtttgatcgagatagcactcggtaaa 497  Q
    |||||| | ||||||||  ||| || |||||||||||    
T  31645945 aggtttaaagagtttgactgagttaacactcggtaaa 31645909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 353 - 477
Target Start/End: Complemental strand, 36673944 - 36673820
Alignment:
Q  353 caatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggta 452  Q
    |||||| | |||||||||||||||| |||||||| |||| ||||| ||||||||| ||||||||||||||||||||  |||||||| |||  ||||||||    
T  36673944 caatgttctgcaaatcgagtgttaaatctccgagattatcgagttgacatttttaagtacaaaaatcgtgttaactctgaggtaaaatcggtttctggta 36673845  T
Q  453 aaatcggaaggtttgacgagtttga 477  Q
    |||| ||||||||| ||||||||||    
T  36673844 aaattggaaggtttaacgagtttga 36673820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 353 - 477
Target Start/End: Complemental strand, 50761892 - 50761768
Alignment:
Q  353 caatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggta 452  Q
    |||||| | ||||||||||||||||||||||||| |||  |||||||| |||||||||||||||||||||||||||  |||||||| | || |||||||     
T  50761892 caatgttcagcaaatcgagtgttaactctccgagattaccgagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaaatagatttctggtg 50761793  T
Q  453 aaatcggaaggtttgacgagtttga 477  Q
    |||| ||||||||| ||||||||||    
T  50761792 aaattggaaggtttaacgagtttga 50761768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 353 - 477
Target Start/End: Original strand, 7665552 - 7665676
Alignment:
Q  353 caatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggta 452  Q
    |||||| || |||||||||||||||||| |||| ||||   ||||||| ||||||| ||| ||||||||||||||| |||||||||||||| || |||||    
T  7665552 caatgttccacaaatcgagtgttaactcgccgaatttacctagtttacgtttttagctaccaaaatcgtgttaactcggaggtaaactcgatttttggta 7665651  T
Q  453 aaatcggaaggtttgacgagtttga 477  Q
    |||||||||  ||||||||||||||    
T  7665652 aaatcggaatatttgacgagtttga 7665676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 353 - 497
Target Start/End: Original strand, 8598620 - 8598764
Alignment:
Q  353 caatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggta 452  Q
    |||||| || ||||||| |||| |||||  ||||||||  |||||||| | ||||||| | |||| |||||||||| |||||||||||||| ||||||||    
T  8598620 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctggta 8598719  T
Q  453 aaatcggaaggtttgacgagtttgatcgagatagcactcggtaaa 497  Q
    ||||||||| ||||||||||||||| |||| || ||||| |||||    
T  8598720 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaa 8598764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 353 - 497
Target Start/End: Original strand, 40897539 - 40897683
Alignment:
Q  353 caatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggta 452  Q
    |||||| ||||| ||||||||||||||||||||| |||  || |||||  ||||||||||||||||||||||||||  |||||||| |||  ||||| ||    
T  40897539 caatgttccgcagatcgagtgttaactctccgagattaccgaatttacgattttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctgata 40897638  T
Q  453 aaatcggaaggtttgacgagtttgatcgagatagcactcggtaaa 497  Q
    |||| ||||||||| ||||||||||  ||| || |||||||||||    
T  40897639 aaattggaaggtttaacgagtttgactgagttaacactcggtaaa 40897683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 353 - 497
Target Start/End: Complemental strand, 44905647 - 44905503
Alignment:
Q  353 caatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggta 452  Q
    |||||| ||||||||||||||||||||||||||| |||  |||||||| || |||||||||||||||||||||| |  ||||||| ||||  ||||||||    
T  44905647 caatgttccgcaaatcgagtgttaactctccgagattaccgagtttacgttcttaggtacaaaaatcgtgttaattctgaggtaatctcggtttctggta 44905548  T
Q  453 aaatcggaaggtttgacgagtttgatcgagatagcactcggtaaa 497  Q
    ||||| ||||| || |||| |||||  ||| || |||||||||||    
T  44905547 aaatcagaaggcttaacgaatttgactgagttaacactcggtaaa 44905503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 354 - 475
Target Start/End: Original strand, 43172889 - 43173010
Alignment:
Q  354 aatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggtaa 453  Q
    ||||| ||||||||||| ||||||||||   ||||||| |||||||  | ||||||||| ||||||||||| ||| |||||||||||||| |||||||||    
T  43172889 aatgttccgcaaatcgaatgttaactctttaagtttatcgagtttatgtgtttaggtaccaaaatcgtgttgactcggaggtaaactcgatttctggtaa 43172988  T
Q  454 aatcggaaggtttgacgagttt 475  Q
    ||||| ||||||||| ||||||    
T  43172989 aatcgaaaggtttgaagagttt 43173010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 353 - 497
Target Start/End: Original strand, 49296077 - 49296221
Alignment:
Q  353 caatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggta 452  Q
    |||||| || ||||||| |||| |||||  ||||||||  |||||||| | ||||||| | |||| |||||||||| |||||||||||||| ||||||||    
T  49296077 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctggta 49296176  T
Q  453 aaatcggaaggtttgacgagtttgatcgagatagcactcggtaaa 497  Q
    |||||| || ||||||||||||||| |||| || ||||| |||||    
T  49296177 aaatcgaaaagtttgacgagtttgaccgagttaacactcagtaaa 49296221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 353 - 497
Target Start/End: Original strand, 53835923 - 53836067
Alignment:
Q  353 caatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggta 452  Q
    |||||| || ||||||| |||| || ||  ||||||||  |||||||| | ||||||| | |||| |||||||||||||||||||||| || ||||||||    
T  53835923 caatgttccacaaatcgcgtgtcaattcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaacttggaggtaaacttgatttctggta 53836022  T
Q  453 aaatcggaaggtttgacgagtttgatcgagatagcactcggtaaa 497  Q
    ||||||||| ||||||||||||||| |||| || ||||| |||||    
T  53836023 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaa 53836067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 353 - 428
Target Start/End: Original strand, 45863231 - 45863306
Alignment:
Q  353 caatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaact 428  Q
    |||||| ||||||||||||||||||||||| ||| ||| ||||||||| |||||||||||||||||||||||||||    
T  45863231 caatgttccgcaaatcgagtgttaactctctgagattaaagagtttacgtttttaggtacaaaaatcgtgttaact 45863306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 393 - 477
Target Start/End: Original strand, 25049872 - 25049956
Alignment:
Q  393 gagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggtaaaatcggaaggtttgacgagtttga 477  Q
    |||||||| ||||||||||| |||||||||| |||| |||||||||||||| |||| |||||||||||| |||||| ||||||||    
T  25049872 gagtttacgtttttaggtaccaaaatcgtgtcaactcggaggtaaactcgatttctagtaaaatcggaatgtttgatgagtttga 25049956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 396 - 497
Target Start/End: Original strand, 16155168 - 16155269
Alignment:
Q  396 tttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggtaaaatcggaaggtttgacgagtttgatcgagatagcactcggta 495  Q
    ||||| ||||||||||| |||||||||||||||  ||||||||||||  || || |||||| |||||||||||||||||||| |||| || ||||| |||    
T  16155168 tttacgtttttaggtaccaaaatcgtgttaactctgaggtaaactcggtttttgataaaattggaaggtttgacgagtttgaccgagttaacactcagta 16155267  T
Q  496 aa 497  Q
    ||    
T  16155268 aa 16155269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 365 - 477
Target Start/End: Complemental strand, 45602545 - 45602433
Alignment:
Q  365 aatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggtaaaatcggaaggt 464  Q
    |||||||||||||||| |||||||||  || ||||| ||||| ||||  ||||| |||| |||| | |||||||||| | |||||||||||||| || ||    
T  45602545 aatcgagtgttaactcgccgagtttaccgaatttacgtttttgggtattaaaattgtgtcaactcgtaggtaaactcaatttctggtaaaatcgaaatgt 45602446  T
Q  465 ttgacgagtttga 477  Q
    |||||||||||||    
T  45602445 ttgacgagtttga 45602433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 393 - 477
Target Start/End: Original strand, 49458359 - 49458443
Alignment:
Q  393 gagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggtaaaatcggaaggtttgacgagtttga 477  Q
    |||||||| | ||||||||  ||||| |||||||||  || |||||||||| |||||||||||||||||||||||||||||||||    
T  49458359 gagtttacgtgtttaggtatcaaaattgtgttaactctgaagtaaactcgatttctggtaaaatcggaaggtttgacgagtttga 49458443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 256 - 350
Target Start/End: Complemental strand, 8402733 - 8402638
Alignment:
Q  256 tgatgacagagcatcatatgatattttagtctatgtttttagttactttcattgcatttaaaggaaaataaga-gttatttagaggagttatcaat 350  Q
    ||||||||||||||||||||||||||||| |||||||||||  || || | |||||||| |||| |||||||| || ||||||||||||| |||||    
T  8402733 tgatgacagagcatcatatgatattttagactatgtttttatgtatttactttgcatttgaaggcaaataagatgtaatttagaggagttgtcaat 8402638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 393 - 482
Target Start/End: Complemental strand, 9818664 - 9818575
Alignment:
Q  393 gagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggtaaaatcggaaggtttgacgagtttgatcgag 482  Q
    |||||||| |||||||||   |||| |||||||||| |||||||||||||| || |||| ||||||||| ||||||||||||||| ||||    
T  9818664 gagtttacgtttttaggtggcaaaaacgtgttaactcggaggtaaactcgatttttggtgaaatcggaaagtttgacgagtttgaccgag 9818575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 393 - 497
Target Start/End: Complemental strand, 22489584 - 22489480
Alignment:
Q  393 gagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggtaaaatcggaaggtttgacgagtttgatcgagatagcactcg 492  Q
    |||||||| | ||||||| | |||| |||||||| |  || |||||||||| |||||||||||||||||||||| |||||||||| |||| || |||||     
T  22489584 gagtttacgtgtttaggtgccaaaaacgtgttaaatcagatgtaaactcgatttctggtaaaatcggaaggtttaacgagtttgaccgagttaacactca 22489485  T
Q  493 gtaaa 497  Q
    |||||    
T  22489484 gtaaa 22489480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 353 - 497
Target Start/End: Original strand, 42736268 - 42736412
Alignment:
Q  353 caatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggta 452  Q
    |||||| ||| ||||| |||||||| |   ||||||||| |||||| | ||||||| ||| |||||||||||||| | ||| ||||||    ||||||||    
T  42736268 caatgttccgtaaatcaagtgttaatttgtcgagtttatcgagtttgcgtttttagataccaaaatcgtgttaacattgagataaacttagtttctggta 42736367  T
Q  453 aaatcggaaggtttgacgagtttgatcgagatagcactcggtaaa 497  Q
    |||||  || |||||||||||||||||||| || || ||||||||    
T  42736368 aaatcaaaaagtttgacgagtttgatcgagttaacattcggtaaa 42736412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 268 - 350
Target Start/End: Complemental strand, 21829303 - 21829220
Alignment:
Q  268 atcatatgatattttagtctatgtttttagttactttcattgcatttaaaggaaaataaga-gttatttagaggagttatcaat 350  Q
    ||||||||||||||| | |||| |||||| ||| |||  |||||||| ||||||||||||| || ||||||||||||| |||||    
T  21829303 atcatatgatatttttgactatatttttatttattttatttgcatttgaaggaaaataagaggtcatttagaggagttgtcaat 21829220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 267 - 324
Target Start/End: Original strand, 11474789 - 11474846
Alignment:
Q  267 catcatatgatattttagtctatgtttttagttactttcattgcatttaaaggaaaat 324  Q
    ||||||||||||||| || ||| |||| |||||| |||| ||||| ||||||||||||    
T  11474789 catcatatgatatttcagactacgtttatagttattttctttgcacttaaaggaaaat 11474846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 420 - 497
Target Start/End: Complemental strand, 34483823 - 34483746
Alignment:
Q  420 gtgttaacttggaggtaaactcgacttctggtaaaatcggaaggtttgacgagtttgatcgagatagcactcggtaaa 497  Q
    |||||||||  |||||||| |||  ||||||||||||  |||||||| ||||||||||  ||| || |||||||||||    
T  34483823 gtgttaactctgaggtaaaatcggtttctggtaaaatttgaaggtttaacgagtttgactgagttaacactcggtaaa 34483746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0543 (Bit Score: 85; Significance: 3e-40; HSPs: 1)
Name: scaffold0543
Description:

Target: scaffold0543; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 353 - 497
Target Start/End: Original strand, 10934 - 11078
Alignment:
Q  353 caatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggta 452  Q
    |||||| ||||||||||||||||||||||||||| |||  ||||||||||||||||||||||||||||||||||||  |||||||| |||| || |||||    
T  10934 caatgttccgcaaatcgagtgttaactctccgagattaccgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaattcgatttttggta 11033  T
Q  453 aaatcggaaggtttgacgagtttgatcgagatagcactcggtaaa 497  Q
    |||| ||||||||| ||||||||||  ||| || |||||||||||    
T  11034 aaattggaaggtttaacgagtttgactgagttaacactcggtaaa 11078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 85; Significance: 3e-40; HSPs: 52)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 353 - 497
Target Start/End: Complemental strand, 29510208 - 29510064
Alignment:
Q  353 caatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggta 452  Q
    |||||| |||||||||||||||||||||||||||||||| |||||||| | ||||||||  |||||||||||||||  || |||||||| | ||||||||    
T  29510208 caatgttccgcaaatcgagtgttaactctccgagtttatcgagtttacgtgtttaggtatcaaaatcgtgttaactctgatgtaaactcaatttctggta 29510109  T
Q  453 aaatcggaaggtttgacgagtttgatcgagatagcactcggtaaa 497  Q
    ||||| ||||||||||||||||||| |||| || |||||||||||    
T  29510108 aaatcagaaggtttgacgagtttgaccgagttaacactcggtaaa 29510064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 353 - 497
Target Start/End: Complemental strand, 49501324 - 49501180
Alignment:
Q  353 caatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggta 452  Q
    |||||| | ||||||||||||||||||||||||| |||  |||||||| |||||||||||||||||||||||||||  ||||||||||||  ||||||||    
T  49501324 caatgttctgcaaatcgagtgttaactctccgagattaccgagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaactcggtttctggta 49501225  T
Q  453 aaatcggaaggtttgacgagtttgatcgagatagcactcggtaaa 497  Q
    |||||||||||||| ||||||||||  ||| || |||||||||||    
T  49501224 aaatcggaaggtttaacgagtttgacggagttaacactcggtaaa 49501180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 353 - 497
Target Start/End: Complemental strand, 49507389 - 49507245
Alignment:
Q  353 caatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggta 452  Q
    |||||| | ||||||||||||||||||||||||| |||  |||||||| |||||||||||||||||||||||||||  ||||||||||||  ||||||||    
T  49507389 caatgttctgcaaatcgagtgttaactctccgagattaccgagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaactcggtttctggta 49507290  T
Q  453 aaatcggaaggtttgacgagtttgatcgagatagcactcggtaaa 497  Q
    |||||||||||||| ||||||||||  ||| || |||||||||||    
T  49507289 aaatcggaaggtttaacgagtttgacggagttaacactcggtaaa 49507245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 353 - 477
Target Start/End: Original strand, 5800374 - 5800498
Alignment:
Q  353 caatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggta 452  Q
    |||||| ||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||  |||||||| |||  ||||||||    
T  5800374 caatgttccgcaaatcgagtgttaactctccgagattatcgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaattcggtttctggta 5800473  T
Q  453 aaatcggaaggtttgacgagtttga 477  Q
    | ||| |||||||| ||||||||||    
T  5800474 acatcagaaggtttaacgagtttga 5800498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 353 - 477
Target Start/End: Original strand, 27768474 - 27768598
Alignment:
Q  353 caatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggta 452  Q
    |||||| |||||||||||||||||| |||||||| |||| ||||||||||||||||||||||||||||||||||||  |||||||| |||  ||||||||    
T  27768474 caatgttccgcaaatcgagtgttaaatctccgagattatcgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggta 27768573  T
Q  453 aaatcggaaggtttgacgagtttga 477  Q
    |||| ||||||||| ||||||||||    
T  27768574 aaattggaaggtttaacgagtttga 27768598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 353 - 497
Target Start/End: Original strand, 48261488 - 48261632
Alignment:
Q  353 caatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggta 452  Q
    |||||| |||||||||||||||||| |||||||| |||| ||||| ||||||||||||||||||||||||||||||  |||||||| |||  ||||||||    
T  48261488 caatgttccgcaaatcgagtgttaaatctccgagattatcgagttgacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggta 48261587  T
Q  453 aaatcggaaggtttgacgagtttgatcgagatagcactcggtaaa 497  Q
    |||| ||||||||| ||||||||||  ||| || |||||||||||    
T  48261588 aaattggaaggtttaacgagtttgactgagttaacactcggtaaa 48261632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 363 - 497
Target Start/End: Original strand, 41725533 - 41725667
Alignment:
Q  363 caaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggtaaaatcggaag 462  Q
    |||||||||||||||||||||| | |||   ||||||| |||||||||||||||||||||||||||  ||||||||||||| ||||||||||||||||||    
T  41725533 caaatcgagtgttaactctccgtgattacctagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaactcgatttctggtaaaatcggaag 41725632  T
Q  463 gtttgacgagtttgatcgagatagcactcggtaaa 497  Q
    |||| ||||||||||  ||| || |||||||||||    
T  41725633 gtttaacgagtttgactgagttaacactcggtaaa 41725667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 353 - 497
Target Start/End: Original strand, 5441812 - 5441956
Alignment:
Q  353 caatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggta 452  Q
    |||||| ||| ||||||| |||||| |||||||| |||| ||||||||||||||||||||||||||||||||||||  |||||||| |||  ||||||||    
T  5441812 caatgttccgtaaatcgaatgttaaatctccgagattatcgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggta 5441911  T
Q  453 aaatcggaaggtttgacgagtttgatcgagatagcactcggtaaa 497  Q
    |||| ||||||||| ||||||||||  ||| || |||||||||||    
T  5441912 aaattggaaggtttaacgagtttgactgagttaacactcggtaaa 5441956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 351 - 475
Target Start/End: Original strand, 32889855 - 32889979
Alignment:
Q  351 agcaatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctgg 450  Q
    |||||||| |||||||||||||||||||||||||| ||||  |||||||| | ||||||||| |||||||||||||||| || |||||||| | ||||||    
T  32889855 agcaatgttccgcaaatcgagtgttaactctccgaatttaccgagtttacgtgtttaggtaccaaaatcgtgttaactttgatgtaaactcaatttctgg 32889954  T
Q  451 taaaatcggaaggtttgacgagttt 475  Q
    ||||||| |||||||||||||||||    
T  32889955 taaaatcagaaggtttgacgagttt 32889979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 353 - 497
Target Start/End: Complemental strand, 37828221 - 37828077
Alignment:
Q  353 caatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggta 452  Q
    |||||| ||||||||||| |||||| |||||||| |||| |||||||||||||||| |||||||||||||||||||  |||||||| |||  ||||||||    
T  37828221 caatgttccgcaaatcgaatgttaaatctccgagattatcgagtttacatttttagatacaaaaatcgtgttaactctgaggtaaaatcggtttctggta 37828122  T
Q  453 aaatcggaaggtttgacgagtttgatcgagatagcactcggtaaa 497  Q
    |||| ||||||||| ||||||||||  ||| || |||||||||||    
T  37828121 aaattggaaggtttaacgagtttgactgagttaacactcggtaaa 37828077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 353 - 497
Target Start/End: Original strand, 51321266 - 51321410
Alignment:
Q  353 caatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggta 452  Q
    |||||| ||||||||||||||||||||||||||  |||| ||||||||||||||||||||||||||||||||||||  || ||||| |||  ||||||||    
T  51321266 caatgttccgcaaatcgagtgttaactctccgatattatcgagtttacatttttaggtacaaaaatcgtgttaactctgacgtaaaatcggtttctggta 51321365  T
Q  453 aaatcggaaggtttgacgagtttgatcgagatagcactcggtaaa 497  Q
    |||| ||||||||| || |||||||  ||| || |||||||||||    
T  51321366 aaattggaaggtttaaccagtttgactgagttaacactcggtaaa 51321410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 353 - 496
Target Start/End: Original strand, 54341552 - 54341695
Alignment:
Q  353 caatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggta 452  Q
    |||||| |||||||||||||||||| |||||||| |||| ||||||||||||||||||||||||||||||| ||||  |||||||| |||  ||||||||    
T  54341552 caatgttccgcaaatcgagtgttaaatctccgagattatcgagtttacatttttaggtacaaaaatcgtgtaaactctgaggtaaaatcggtttctggta 54341651  T
Q  453 aaatcggaaggtttgacgagtttgatcgagatagcactcggtaa 496  Q
    |||| | ||||||| ||||||||||  ||| || ||||||||||    
T  54341652 aaattgaaaggtttaacgagtttgactgagttaacactcggtaa 54341695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 353 - 477
Target Start/End: Original strand, 32322476 - 32322600
Alignment:
Q  353 caatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggta 452  Q
    |||||| |||||| |||||||||||||||||||| |||  |||||||| ||||||||||||||||||||||||| |  ||||||||||||  ||||||||    
T  32322476 caatgttccgcaagtcgagtgttaactctccgagattaccgagtttacgtttttaggtacaaaaatcgtgttaattctgaggtaaactcggtttctggta 32322575  T
Q  453 aaatcggaaggtttgacgagtttga 477  Q
    ||||||||||| || ||||||||||    
T  32322576 aaatcggaaggcttaacgagtttga 32322600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 353 - 497
Target Start/End: Original strand, 50517163 - 50517298
Alignment:
Q  353 caatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggta 452  Q
    |||||| |||||||||||||||||||||||||||||||         | | ||||||||| |||||||||||||||| ||||||||||||| ||||||||    
T  50517163 caatgttccgcaaatcgagtgttaactctccgagttta---------cgtgtttaggtaccaaaatcgtgttaactttgaggtaaactcgatttctggta 50517253  T
Q  453 aaatcggaaggtttgacgagtttgatcgagatagcactcggtaaa 497  Q
    |||| |||||||||||||||||||| |||| || |||||||||||    
T  50517254 aaattggaaggtttgacgagtttgaccgagttaacactcggtaaa 50517298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 364 - 497
Target Start/End: Original strand, 29855937 - 29856070
Alignment:
Q  364 aaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggtaaaatcggaagg 463  Q
    ||||||||| |||| |||||||| |||  |||||||| |||||| ||||||||||||||||||||  ||||||||||||| |||||||||||| ||||||    
T  29855937 aaatcgagtattaattctccgagattaccgagtttacgtttttatgtacaaaaatcgtgttaactctgaggtaaactcgatttctggtaaaattggaagg 29856036  T
Q  464 tttgacgagtttgatcgagatagcactcggtaaa 497  Q
    ||| ||||||||||  ||| || |||||||||||    
T  29856037 tttaacgagtttgactgagttaacactcggtaaa 29856070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 353 - 477
Target Start/End: Complemental strand, 30967134 - 30967010
Alignment:
Q  353 caatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggta 452  Q
    |||||| ||||||||||||||||||||||||||| |||  |||||||| |||||||||||||||||||||||||||  ||| |||| | |  ||||||||    
T  30967134 caatgttccgcaaatcgagtgttaactctccgagattaccgagtttacgtttttaggtacaaaaatcgtgttaactctgagataaaattggtttctggta 30967035  T
Q  453 aaatcggaaggtttgacgagtttga 477  Q
    |||| ||||||||| ||||||||||    
T  30967034 aaattggaaggtttaacgagtttga 30967010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 353 - 497
Target Start/End: Original strand, 50018602 - 50018746
Alignment:
Q  353 caatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggta 452  Q
    |||||| | ||||||||||||||||||||||||| |||  ||||||||||||||||||||||||||| ||||||||  |||||||| |||  ||||||||    
T  50018602 caatgttctgcaaatcgagtgttaactctccgagattaccgagtttacatttttaggtacaaaaatcatgttaactctgaggtaaaatcggtttctggta 50018701  T
Q  453 aaatcggaaggtttgacgagtttgatcgagatagcactcggtaaa 497  Q
    |||| ||||||||| | ||| ||||  ||| || |||||||||||    
T  50018702 aaattggaaggtttaaagagattgacagagttaacactcggtaaa 50018746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 364 - 477
Target Start/End: Original strand, 871782 - 871894
Alignment:
Q  364 aaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggtaaaatcggaagg 463  Q
    |||||||||||||||||  ||||||||  |||||||| ||||||||||| ||| |||||| |||| |||||||||||||| ||||||||||||||||| |    
T  871782 aaatcgagtgttaactcgtcgagtttaccgagtttacgtttttaggtaccaaa-tcgtgtcaactcggaggtaaactcgatttctggtaaaatcggaatg 871880  T
Q  464 tttgacgagtttga 477  Q
    ||||||||||||||    
T  871881 tttgacgagtttga 871894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 353 - 477
Target Start/End: Original strand, 23987607 - 23987730
Alignment:
Q  353 caatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggta 452  Q
    |||||| ||||||||||||||||| ||||||||| |||  |||||||| |||||||||||||||||||||||||||  |||||||| | |  ||||||||    
T  23987607 caatgttccgcaaatcgagtgttacctctccgagattaccgagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaa-ttggtttctggta 23987705  T
Q  453 aaatcggaaggtttgacgagtttga 477  Q
    |||| ||||||||| ||||||||||    
T  23987706 aaattggaaggtttaacgagtttga 23987730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 354 - 477
Target Start/End: Original strand, 28484306 - 28484430
Alignment:
Q  354 aatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaa-tcgtgttaacttggaggtaaactcgacttctggta 452  Q
    ||||| |||||||| |||||||||||||| ||| |||  |||||||| |||||||||||||||| |||||||||||  ||||||||||||  ||||||||    
T  28484306 aatgttccgcaaattgagtgttaactctctgagattaccgagtttacgtttttaggtacaaaaagtcgtgttaactctgaggtaaactcggtttctggta 28484405  T
Q  453 aaatcggaaggtttgacgagtttga 477  Q
    |||| ||||||||| ||||||||||    
T  28484406 aaattggaaggtttaacgagtttga 28484430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 353 - 477
Target Start/End: Complemental strand, 49834625 - 49834501
Alignment:
Q  353 caatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggta 452  Q
    |||||| ||| |||| ||||||||||||||  || |||  |||||||| ||||||| |||||||||||||||||||  ||||||||||||  ||||||||    
T  49834625 caatgttccgtaaattgagtgttaactctctaagattaccgagtttacgtttttagctacaaaaatcgtgttaactctgaggtaaactcggtttctggta 49834526  T
Q  453 aaatcggaaggtttgacgagtttga 477  Q
    |||||||||||||| ||||||||||    
T  49834525 aaatcggaaggtttaacgagtttga 49834501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 353 - 497
Target Start/End: Complemental strand, 54853267 - 54853123
Alignment:
Q  353 caatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggta 452  Q
    |||||| || |||||||||||||||||||||||| |||  |||||||| |||||| |||||||||| |||||||||  |||||||| |||  |||| |||    
T  54853267 caatgttccacaaatcgagtgttaactctccgagattaccgagtttacctttttatgtacaaaaattgtgttaactctgaggtaaaatcggtttctcgta 54853168  T
Q  453 aaatcggaaggtttgacgagtttgatcgagatagcactcggtaaa 497  Q
    ||||  |||||||| ||||||||||| ||| || |||||||||||    
T  54853167 aaattagaaggtttaacgagtttgattgagttaacactcggtaaa 54853123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 353 - 477
Target Start/End: Complemental strand, 23671516 - 23671392
Alignment:
Q  353 caatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggta 452  Q
    |||||| ||||||||||||||||| | ||| |||||||  |  ||||| | ||||||||| ||||||||||||||| |||||||||||||| |||||||     
T  23671516 caatgttccgcaaatcgagtgttagcactctgagtttaccggttttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtg 23671417  T
Q  453 aaatcggaaggtttgacgagtttga 477  Q
    |||||| || |||||||||||||||    
T  23671416 aaatcgaaaagtttgacgagtttga 23671392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 353 - 477
Target Start/End: Original strand, 55165486 - 55165610
Alignment:
Q  353 caatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggta 452  Q
    |||||| || ||||||||||| ||||||  ||||||||  |||||||| |||||| |||| |||||||| |||||||||||||||||| || || |||||    
T  55165486 caatgttccacaaatcgagtgctaactcgtcgagtttactgagtttacgtttttacgtaccaaaatcgtattaacttggaggtaaacttgatttatggta 55165585  T
Q  453 aaatcggaaggtttgacgagtttga 477  Q
    ||||| ||| |||||||||||||||    
T  55165586 aaatcagaatgtttgacgagtttga 55165610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 354 - 469
Target Start/End: Original strand, 33138771 - 33138877
Alignment:
Q  354 aatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggtaa 453  Q
    ||||| |||||||||||||||||||||||||||||||         | | ||||||||| ||||||||||||||| |||||||||||||| |||||||||    
T  33138771 aatgttccgcaaatcgagtgttaactctccgagttta---------cgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtaa 33138861  T
Q  454 aatcggaaggtttgac 469  Q
    ||||||||||||||||    
T  33138862 aatcggaaggtttgac 33138877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 383 - 497
Target Start/End: Original strand, 29469154 - 29469268
Alignment:
Q  383 cgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggtaaaatcggaaggtttgacgagtttgatcgag 482  Q
    ||||||||  |||||||| | ||||||| | |||| |||||||||| |||||||||||||| ||||||||||||||||| ||||||||||||||| ||||    
T  29469154 cgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctggtaaaatcggaaagtttgacgagtttgaccgag 29469253  T
Q  483 atagcactcggtaaa 497  Q
     || ||||| |||||    
T  29469254 ttaacactcagtaaa 29469268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 352 - 497
Target Start/End: Original strand, 46286678 - 46286814
Alignment:
Q  352 gcaatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggt 451  Q
    ||||||| |||||||||||||||||||||||||||||||         | ||||||||||| ||||||||||||||    |||||||||||| |||| ||    
T  46286678 gcaatgttccgcaaatcgagtgttaactctccgagttta---------cgtttttaggtaccaaaatcgtgttaacactaaggtaaactcgatttctagt 46286768  T
Q  452 aaaatcggaaggtttgacgagtttgatcgagatagcactcggtaaa 497  Q
    ||| |||||||||||||||||||||| |||| || |||||| ||||    
T  46286769 aaactcggaaggtttgacgagtttgaccgagttaacactcgataaa 46286814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 353 - 497
Target Start/End: Original strand, 8084170 - 8084314
Alignment:
Q  353 caatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggta 452  Q
    |||||| || |||| || |||| |||||  ||||||||  |||||||| | ||||||| | |||| |||||||||| |||||||||||||| |||| |||    
T  8084170 caatgttccacaaaccgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagta 8084269  T
Q  453 aaatcggaaggtttgacgagtttgatcgagatagcactcggtaaa 497  Q
    ||||||||| ||||||||||||||| |||| || ||||| |||||    
T  8084270 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaa 8084314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 393 - 482
Target Start/End: Complemental strand, 26491225 - 26491136
Alignment:
Q  393 gagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggtaaaatcggaaggtttgacgagtttgatcgag 482  Q
    |||||||| | ||||||||| ||||||||||||| || ||||||||||||  ||||||||||||| ||||||||||||||||||| ||||    
T  26491225 gagtttacgtgtttaggtaccaaaatcgtgttaaatttgaggtaaactcggtttctggtaaaatcagaaggtttgacgagtttgaccgag 26491136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 353 - 497
Target Start/End: Complemental strand, 32683818 - 32683675
Alignment:
Q  353 caatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggta 452  Q
    |||||| || |||||||||||||||||||| ||| |||  ||||| || ||||||||||||||||||||||||| |  |||||||  |||  ||||| ||    
T  32683818 caatgttccacaaatcgagtgttaactctcagagattaccgagtt-acgtttttaggtacaaaaatcgtgttaattatgaggtaagatcggtttctgtta 32683720  T
Q  453 aaatcggaaggtttgacgagtttgatcgagatagcactcggtaaa 497  Q
    |||| ||||||||| ||||||||||  ||| || |||||||||||    
T  32683719 aaattggaaggtttaacgagtttgaatgagttaacactcggtaaa 32683675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 353 - 428
Target Start/End: Original strand, 37916211 - 37916286
Alignment:
Q  353 caatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaact 428  Q
    |||||| |||||||| |||||||||||||||||| |||| ||||||||||||||| |||||||||| |||||||||    
T  37916211 caatgttccgcaaattgagtgttaactctccgagattatcgagtttacatttttatgtacaaaaattgtgttaact 37916286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 393 - 497
Target Start/End: Complemental strand, 42937513 - 42937409
Alignment:
Q  393 gagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggtaaaatcggaaggtttgacgagtttgatcgagatagcactcg 492  Q
    |||||||| | ||||||| | |||| ||| |||||| |||||||||||||| |||||||||||||| || ||||||||||||||| |||| || |||||     
T  42937513 gagtttacgtatttaggtgctaaaagcgttttaactcggaggtaaactcgatttctggtaaaatcgaaaagtttgacgagtttgaccgagttaacactcc 42937414  T
Q  493 gtaaa 497  Q
    |||||    
T  42937413 gtaaa 42937409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 393 - 482
Target Start/End: Complemental strand, 6487420 - 6487331
Alignment:
Q  393 gagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggtaaaatcggaaggtttgacgagtttgatcgag 482  Q
    |||||||| |||||||||   |||| |||||||||| |||||||||||||| || |||| ||||||||| ||||||||||||||| ||||    
T  6487420 gagtttacgtttttaggtggcaaaaacgtgttaactcggaggtaaactcgatttttggtgaaatcggaaagtttgacgagtttgaccgag 6487331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 255 - 350
Target Start/End: Original strand, 22119577 - 22119673
Alignment:
Q  255 ctgatgacagagcatcatatgatattttagtctatgtttttagttactttcattgcatttaaaggaaaataag-agttatttagaggagttatcaat 350  Q
    ||||||| ||| |||||||||||||||||  ||||||||||||||| |||| |||||||| |||| |||| || ||||||||| ||||||| |||||    
T  22119577 ctgatgatagaacatcatatgatattttatgctatgtttttagttattttctttgcatttgaaggcaaattagaagttatttataggagttgtcaat 22119673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 268 - 329
Target Start/End: Original strand, 10576397 - 10576458
Alignment:
Q  268 atcatatgatattttagtctatgtttttagttactttcattgcatttaaaggaaaataagag 329  Q
    ||||||||||||||||| ||||||||||||||| |||| || ||||| ||||||||||||||    
T  10576397 atcatatgatattttagactatgtttttagttattttctttccatttgaaggaaaataagag 10576458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 264 - 347
Target Start/End: Complemental strand, 17339988 - 17339904
Alignment:
Q  264 gagcatcatatgatattttagtctatgtttttagttactttcattgcatttaaaggaaaataaga-gttatttagaggagttatc 347  Q
    ||||||||||||||||||||| ||||||||||| ||| |||  || |||||||||| |||||||| |  ||||||||||||||||    
T  17339988 gagcatcatatgatattttaggctatgtttttaattattttatttacatttaaaggcaaataagaggacatttagaggagttatc 17339904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 361 - 477
Target Start/End: Complemental strand, 24966644 - 24966537
Alignment:
Q  361 cgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggtaaaatcgga 460  Q
    ||||||||||||||||||||||||||         ||||| | ||||||||| ||||||||||||||| ||| ||||| |||  || ||||||||| |||    
T  24966644 cgcaaatcgagtgttaactctccgag---------tttacgtgtttaggtaccaaaatcgtgttaactcggaagtaaattcggtttttggtaaaatggga 24966554  T
Q  461 aggtttgacgagtttga 477  Q
    ||||||| |||||||||    
T  24966553 aggtttgccgagtttga 24966537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 12 - 108
Target Start/End: Original strand, 39041731 - 39041827
Alignment:
Q  12 atcatcacttcaaccaaaattcaccaccacgctcaaaatcaccattaaaattcaaactcccaacccaacaacaccaaccacgacgacttgttcaact 108  Q
    ||||||||  |||||||||||||||||||| | ||| ||||| ||||| |||| ||||||||  |||||| |||||||||| || | ||||||||||    
T  39041731 atcatcaccacaaccaaaattcaccaccacacacaagatcacaattaacattccaactcccagtccaacatcaccaaccaccacaagttgttcaact 39041827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 264 - 329
Target Start/End: Original strand, 46647136 - 46647201
Alignment:
Q  264 gagcatcatatgatattttagtctatgtttttagttactttcattgcatttaaaggaaaataagag 329  Q
    ||||||||||||||||||||  ||||||||||| ||| |||| ||| |||| ||||||||||||||    
T  46647136 gagcatcatatgatattttacactatgtttttaattattttctttgtatttgaaggaaaataagag 46647201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 393 - 482
Target Start/End: Original strand, 51967278 - 51967367
Alignment:
Q  393 gagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggtaaaatcggaaggtttgacgagtttgatcgag 482  Q
    |||||||| |||||||||   |||| |||||||||| |||||||||||||  || |||| |||||| || ||||||||||||||| ||||    
T  51967278 gagtttacgtttttaggtggcaaaaacgtgttaactcggaggtaaactcggtttttggtgaaatcgaaaagtttgacgagtttgaccgag 51967367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 393 - 469
Target Start/End: Complemental strand, 46863017 - 46862941
Alignment:
Q  393 gagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggtaaaatcggaaggtttgac 469  Q
    |||||||| | ||||||||| ||||| |||||||||  || ||||| |||| |||||||||||||| ||||||||||    
T  46863017 gagtttacgtgtttaggtactaaaattgtgttaactatgaagtaaattcgatttctggtaaaatcgaaaggtttgac 46862941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 393 - 482
Target Start/End: Original strand, 9972774 - 9972863
Alignment:
Q  393 gagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggtaaaatcggaaggtttgacgagtttgatcgag 482  Q
    |||||||  |||||||||   |||| ||||| |||| |||||||||||||  || |||| ||||||||| ||||||||||||||| ||||    
T  9972774 gagtttatgtttttaggtggcaaaaacgtgtaaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgag 9972863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 393 - 482
Target Start/End: Original strand, 26448632 - 26448721
Alignment:
Q  393 gagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggtaaaatcggaaggtttgacgagtttgatcgag 482  Q
    ||||||||||||||||||   |||| | ||| |||| |||||||||||  | || |||| ||||||||| ||||||||||||||| ||||    
T  26448632 gagtttacatttttaggtggcaaaaacatgtaaactcggaggtaaacttaatttttggtgaaatcggaaagtttgacgagtttgaccgag 26448721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 393 - 482
Target Start/End: Original strand, 54561220 - 54561309
Alignment:
Q  393 gagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggtaaaatcggaaggtttgacgagtttgatcgag 482  Q
    ||||||||||||||||||   |||| | ||| |||| |||||||||||||  || |||| ||||||||| |||||||| |||||| ||||    
T  54561220 gagtttacatttttaggtggcaaaaacatgtaaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgtgtttgaccgag 54561309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 254 - 344
Target Start/End: Original strand, 21167659 - 21167750
Alignment:
Q  254 actgatgacagagcatcatatgatatttta-gtctatgtttttagttactttcattgcatttaaaggaaaataaga-gttatttagaggagtt 344  Q
    |||||||||| | |||||||||||| |||| ||| ||||||||||||| ||   |||||||| ||||||||||||| || |||||||||||||    
T  21167659 actgatgacaaaacatcatatgatagtttatgtc-atgtttttagttatttgttttgcatttgaaggaaaataagacgtcatttagaggagtt 21167750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 393 - 477
Target Start/End: Complemental strand, 56424077 - 56423993
Alignment:
Q  393 gagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggtaaaatcggaaggtttgacgagtttga 477  Q
    |||||||| |||||||||   |||| |||||||||| |||||||||||||  || | || ||||||||| |||||| ||||||||    
T  56424077 gagtttacgtttttaggtggcaaaaacgtgttaactcggaggtaaactcggtttttagtgaaatcggaaagtttgatgagtttga 56423993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 393 - 482
Target Start/End: Complemental strand, 8563460 - 8563371
Alignment:
Q  393 gagtttacatttttaggt-acaaaaatcgtgttaacttggaggtaaactcgacttctggtaaaatcggaaggtttgacgagtttgatcgag 482  Q
    |||||||| ||||||| | ||||||| |||||||||| |||| ||||||||  || || | ||||||||| ||||||||||||||| ||||    
T  8563460 gagtttacgtttttagatgacaaaaa-cgtgttaactcggagataaactcggtttttgatgaaatcggaaagtttgacgagtttgaccgag 8563371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 396 - 440
Target Start/End: Complemental strand, 2326760 - 2326716
Alignment:
Q  396 tttacatttttaggtacaaaaatcgtgttaacttggaggtaaact 440  Q
    ||||| ||||||||||| |||||||||| |||||||| |||||||    
T  2326760 tttacgtttttaggtaccaaaatcgtgtaaacttggatgtaaact 2326716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 264 - 324
Target Start/End: Original strand, 9288150 - 9288210
Alignment:
Q  264 gagcatcatatgatattttagtctatgtttttagttactttcattgcatttaaaggaaaat 324  Q
    ||||| |||||||||||||||  ||||||||||||   |||| |||||| |||||||||||    
T  9288150 gagcaccatatgatattttaggatatgtttttagtagttttctttgcatataaaggaaaat 9288210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 354 - 390
Target Start/End: Original strand, 12754489 - 12754525
Alignment:
Q  354 aatgtgccgcaaatcgagtgttaactctccgagttta 390  Q
    ||||| ||||||||||||||||||||| |||||||||    
T  12754489 aatgttccgcaaatcgagtgttaactcgccgagttta 12754525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 393 - 461
Target Start/End: Original strand, 14334395 - 14334463
Alignment:
Q  393 gagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggtaaaatcggaa 461  Q
    |||||||| ||||||||||| ||||||| || |||| ||| ||||||| |  || ||||||||||||||    
T  14334395 gagtttacgtttttaggtaccaaaatcgcgtaaactcggacgtaaacttgttttttggtaaaatcggaa 14334463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 445 - 477
Target Start/End: Original strand, 37916291 - 37916323
Alignment:
Q  445 ttctggtaaaatcggaaggtttgacgagtttga 477  Q
    |||||||||||||||||||||| ||||||||||    
T  37916291 ttctggtaaaatcggaaggtttaacgagtttga 37916323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 84; Significance: 1e-39; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 353 - 492
Target Start/End: Original strand, 89241 - 89380
Alignment:
Q  353 caatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggta 452  Q
    |||||| ||| ||||||||||||||||||  |||||||| |||||||  ||||||||||| || |||||||||||||| |||||||||||| ||||||||    
T  89241 caatgttccgtaaatcgagtgttaactctgtgagtttatcgagtttaagtttttaggtaccaatatcgtgttaacttgaaggtaaactcgatttctggta 89340  T
Q  453 aaatcggaaggtttgacgagtttgatcgagatagcactcg 492  Q
    |||| ||||||||||||||||||||||||| || ||||||    
T  89341 aaattggaaggtttgacgagtttgatcgagttaacactcg 89380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 81; Significance: 7e-38; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 353 - 497
Target Start/End: Complemental strand, 57856 - 57712
Alignment:
Q  353 caatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggta 452  Q
    |||||| ||||||||||||||||||||||||||| |||  |||||||| |||||||||||||||||||||||||||  ||||||||||||  |||| |||    
T  57856 caatgttccgcaaatcgagtgttaactctccgagattaccgagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaactcggtttctagta 57757  T
Q  453 aaatcggaaggtttgacgagtttgatcgagatagcactcggtaaa 497  Q
    ||||| |||||||| | ||||||||| ||| || |||||||||||    
T  57756 aaatcagaaggtttaatgagtttgattgagttaacactcggtaaa 57712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 81; Significance: 7e-38; HSPs: 48)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 353 - 497
Target Start/End: Original strand, 7027313 - 7027457
Alignment:
Q  353 caatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggta 452  Q
    |||||| |||||||||||||||||| |||||||| |||| ||||||||||||||||||||||||||||||||||||  |||||||| |||  ||||||||    
T  7027313 caatgttccgcaaatcgagtgttaaatctccgagattatcgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggta 7027412  T
Q  453 aaatcggaaggtttgacgagtttgatcgagatagcactcggtaaa 497  Q
    |||| | ||||||| ||||||||||  ||| || |||||||||||    
T  7027413 aaattgaaaggtttaacgagtttgactgagttaacactcggtaaa 7027457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 353 - 497
Target Start/End: Complemental strand, 6224369 - 6224225
Alignment:
Q  353 caatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggta 452  Q
    |||||| ||||||||||||||||||||||||||| |||| |||||||| |||||||||||| ||||||||||||||   |||| ||||||  |||| |||    
T  6224369 caatgttccgcaaatcgagtgttaactctccgagattatcgagtttacgtttttaggtacacaaatcgtgttaactcttaggtgaactcggtttctagta 6224270  T
Q  453 aaatcggaaggtttgacgagtttgatcgagatagcactcggtaaa 497  Q
    |||||||||||||| ||||||||||  ||| || |||||||||||    
T  6224269 aaatcggaaggtttaacgagtttgactgagttaacactcggtaaa 6224225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 353 - 497
Target Start/End: Original strand, 25288573 - 25288717
Alignment:
Q  353 caatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggta 452  Q
    |||||| ||||||||||| | ||||||||||||| |||  ||||||||||||||||||||||||||||||||||||  ||||||||||||  |||| |||    
T  25288573 caatgttccgcaaatcgaatattaactctccgagattaccgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaactcggtttctagta 25288672  T
Q  453 aaatcggaaggtttgacgagtttgatcgagatagcactcggtaaa 497  Q
    |||||||||||||| ||| ||||||| ||| || |||||| ||||    
T  25288673 aaatcggaaggtttaacgggtttgattgagttaacactcgataaa 25288717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 353 - 497
Target Start/End: Complemental strand, 28740086 - 28739942
Alignment:
Q  353 caatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggta 452  Q
    |||||| ||||||||||||||||||||||||||| |||  |||||||  |||||||||||||||||||||||||||  |||||||| |||  ||||||||    
T  28740086 caatgttccgcaaatcgagtgttaactctccgagattaccgagtttatgtttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggta 28739987  T
Q  453 aaatcggaaggtttgacgagtttgatcgagatagcactcggtaaa 497  Q
    |||| ||||||||| ||||||||||  ||| || |||||||||||    
T  28739986 aaattggaaggtttaacgagtttgactgagttaacactcggtaaa 28739942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 360 - 497
Target Start/End: Original strand, 28845002 - 28845139
Alignment:
Q  360 ccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggtaaaatcgg 459  Q
    ||||||||||||||||||||||||||| |||| |||||||  |||||||||||||||||||||||||||  |||||||| |||  ||||| |||||| ||    
T  28845002 ccgcaaatcgagtgttaactctccgagattatcgagtttatgtttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctgataaaattgg 28845101  T
Q  460 aaggtttgacgagtttgatcgagatagcactcggtaaa 497  Q
    ||||||| ||||||||||  ||| || |||||||||||    
T  28845102 aaggtttaacgagtttgactgagttaacactcggtaaa 28845139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 353 - 497
Target Start/End: Original strand, 18177681 - 18177825
Alignment:
Q  353 caatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggta 452  Q
    |||||| ||| |||||||||||||| ||| |||| |||| ||||||||||||||||||||||||||||||||||||  |||||||| |||  ||||||||    
T  18177681 caatgttccgtaaatcgagtgttaaatcttcgagattatcgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggta 18177780  T
Q  453 aaatcggaaggtttgacgagtttgatcgagatagcactcggtaaa 497  Q
    |||| |||| |||| ||||||||||  ||| || |||||||||||    
T  18177781 aaattggaaagtttaacgagtttgacagagttaacactcggtaaa 18177825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 353 - 477
Target Start/End: Original strand, 26789195 - 26789319
Alignment:
Q  353 caatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggta 452  Q
    |||||| | |||||||||||||||| |||||||| |||| ||||| ||||||||||||||||||||||||||||||  |||||||| |||  ||||||||    
T  26789195 caatgttctgcaaatcgagtgttaaatctccgagattatcgagttgacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggta 26789294  T
Q  453 aaatcggaaggtttgacgagtttga 477  Q
    |||| ||||||||| ||||||||||    
T  26789295 aaattggaaggtttaacgagtttga 26789319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 353 - 475
Target Start/End: Original strand, 10657840 - 10657962
Alignment:
Q  353 caatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggta 452  Q
    |||||| ||| ||||||||||||||||||| ||| |||  |||||||| |||||||||||||||||||||||||||  |||||||| |||| || |||||    
T  10657840 caatgttccgtaaatcgagtgttaactctctgagattaccgagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaaatcgatttttggta 10657939  T
Q  453 aaatcggaaggtttgacgagttt 475  Q
    |||| ||||||||| ||||||||    
T  10657940 aaattggaaggtttaacgagttt 10657962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 352 - 497
Target Start/End: Complemental strand, 31847360 - 31847214
Alignment:
Q  352 gcaatgtgccgcaaatcgagtgttaactctccgagtttatagagttt-acatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctgg 450  Q
    ||||||| || ||||||||||||||||||||||||||||| |||||| || ||||||||||  |||||| || ||||| |||||||||||| | |||||     
T  31847360 gcaatgttcctcaaatcgagtgttaactctccgagtttatcgagttttacgtttttaggtattaaaatcatggtaactcggaggtaaactctatttctga 31847261  T
Q  451 taaaatcggaaggtttgacgagtttgatcgagatagcactcggtaaa 497  Q
    ||||||| |||||||||||||||| || |||  || |||||||||||    
T  31847260 taaaatcagaaggtttgacgagttcgaccgaattaacactcggtaaa 31847214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 352 - 477
Target Start/End: Original strand, 15224190 - 15224315
Alignment:
Q  352 gcaatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggt 451  Q
    ||||||| ||||||||||||||||||| |||||||||||   | ||||| | ||||||||| |||||||||||||||  ||||||||||||| |||||||    
T  15224190 gcaatgttccgcaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcagaggtaaactcgatttctggt 15224289  T
Q  452 aaaatcggaaggtttgacgagtttga 477  Q
     |||||| || |||||||||||||||    
T  15224290 gaaatcgaaaagtttgacgagtttga 15224315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 353 - 497
Target Start/End: Complemental strand, 13833211 - 13833067
Alignment:
Q  353 caatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggta 452  Q
    |||||| |||||||| || |||||||||| |||| |||| |||||||| |||||||||||||||||||||||||||  ||||||||||| | |||| |||    
T  13833211 caatgttccgcaaattgaatgttaactcttcgagattatcgagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaactcaatttctagta 13833112  T
Q  453 aaatcggaaggtttgacgagtttgatcgagatagcactcggtaaa 497  Q
    ||||| |||| ||| || |||||||  ||| || |||||||||||    
T  13833111 aaatcagaagatttaacaagtttgactgagttaacactcggtaaa 13833067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 352 - 497
Target Start/End: Complemental strand, 18900069 - 18899924
Alignment:
Q  352 gcaatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggt 451  Q
    ||||||| || ||||||| |||| |||||  ||||||||  |||||||| | ||||||| | |||| |||||||||| |||||||||||||| |||| ||    
T  18900069 gcaatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagt 18899970  T
Q  452 aaaatcggaaggtttgacgagtttgatcgagatagcactcggtaaa 497  Q
    |||||||||| ||||||||||||||| |||| || ||||| |||||    
T  18899969 aaaatcggaaagtttgacgagtttgaccgagttaacactcagtaaa 18899924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 353 - 497
Target Start/End: Original strand, 33136028 - 33136170
Alignment:
Q  353 caatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggta 452  Q
    |||||| ||||||||||||||||||||||| |||   |  |||||||  |||||||||||||||||||||||||||  ||||||||||||| ||||||||    
T  33136028 caatgttccgcaaatcgagtgttaactctctgaga--accgagtttatgtttttaggtacaaaaatcgtgttaactctgaggtaaactcgatttctggta 33136125  T
Q  453 aaatcggaaggtttgacgagtttgatcgagatagcactcggtaaa 497  Q
     ||||||||||||| |||| |||||   || || |||||||||||    
T  33136126 taatcggaaggtttaacgaatttgactaagttaacactcggtaaa 33136170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 353 - 497
Target Start/End: Original strand, 379340 - 379484
Alignment:
Q  353 caatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggta 452  Q
    |||||| ||||||||||||||||||||||  ||| |||  || ||||| |||||||||||||||||||||||||||  |||||||| |||  || || ||    
T  379340 caatgttccgcaaatcgagtgttaactctttgagattaccgaatttacgtttttaggtacaaaaatcgtgttaactctgaggtaaattcggtttttgata 379439  T
Q  453 aaatcggaaggtttgacgagtttgatcgagatagcactcggtaaa 497  Q
    ||||||||||| || ||||||||||  ||| || |||||||||||    
T  379440 aaatcggaaggcttaacgagtttgactgagttaacactcggtaaa 379484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 353 - 497
Target Start/End: Original strand, 3575251 - 3575395
Alignment:
Q  353 caatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggta 452  Q
    |||||| || |||||||| | |||||| |||||| |||  |||||||| |||||||||||||||||| ||||||||  |||||||| |||  ||||||||    
T  3575251 caatgtccctcaaatcgaatattaactatccgagattactgagtttacgtttttaggtacaaaaatcatgttaactctgaggtaaaatcggtttctggta 3575350  T
Q  453 aaatcggaaggtttgacgagtttgatcgagatagcactcggtaaa 497  Q
    |||| ||||||||| ||||||||||  ||| || |||||||||||    
T  3575351 aaattggaaggtttaacgagtttgactgagttaacactcggtaaa 3575395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 354 - 491
Target Start/End: Original strand, 40829596 - 40829735
Alignment:
Q  354 aatgtgccgcaaatcgagtgttaactctccgag--tttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggt 451  Q
    ||||| ||| |||| ||||||||||||||||||  ||||  |||| ||||||||||||||  ||||||||||||||| |||||||||||||  |||||||    
T  40829596 aatgttccgtaaattgagtgttaactctccgagagtttaccgagtctacatttttaggtatcaaaatcgtgttaactcggaggtaaactcggtttctggt 40829695  T
Q  452 aaaatcggaaggtttgacgagtttgatcgagatagcactc 491  Q
    ||||| | |||||||||||| ||||| |||| || |||||    
T  40829696 aaaatagaaaggtttgacgaatttgaccgagttaacactc 40829735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 353 - 497
Target Start/End: Original strand, 34342199 - 34342343
Alignment:
Q  353 caatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggta 452  Q
    |||||| ||||||||||||||||||||||| |||||||  |||||||| ||||||||||| |||  | ||||| |    |||||||||||  ||||||||    
T  34342199 caatgttccgcaaatcgagtgttaactctctgagtttaccgagtttacgtttttaggtaccaaatccatgttagcactaaggtaaactcggtttctggta 34342298  T
Q  453 aaatcggaaggtttgacgagtttgatcgagatagcactcggtaaa 497  Q
    || ||||||||||||||||||| ||| ||| || || ||||||||    
T  34342299 aactcggaaggtttgacgagttagattgagttaacagtcggtaaa 34342343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 364 - 497
Target Start/End: Complemental strand, 2308843 - 2308710
Alignment:
Q  364 aaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggtaaaatcggaagg 463  Q
    ||||||||||||||||| ||||||||||  | ||||| |||||| |||| ||||||||||||||| ||||||||| |||  || ||||||||||  || |    
T  2308843 aaatcgagtgttaactcgccgagtttattaaatttacgtttttatgtaccaaaatcgtgttaactcggaggtaaattcggtttgtggtaaaatcaaaaag 2308744  T
Q  464 tttgacgagtttgatcgagatagcactcggtaaa 497  Q
    |||||| ||||||| | || || |||||||||||    
T  2308743 tttgacaagtttgaccaagttaacactcggtaaa 2308710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 393 - 497
Target Start/End: Complemental strand, 35404419 - 35404315
Alignment:
Q  393 gagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggtaaaatcggaaggtttgacgagtttgatcgagatagcactcg 492  Q
    |||||||| |||||||||||  ||||||||||||||| ||||||||||||  || ||||||||| |||| ||||||||||||||| |||| || ||||||    
T  35404419 gagtttacgtttttaggtaccgaaatcgtgttaacttagaggtaaactcggtttttggtaaaattggaaagtttgacgagtttgaccgagttaacactcg 35404320  T
Q  493 gtaaa 497  Q
     ||||    
T  35404319 ataaa 35404315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 393 - 477
Target Start/End: Original strand, 15926379 - 15926463
Alignment:
Q  393 gagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggtaaaatcggaaggtttgacgagtttga 477  Q
    |||||||| ||||| ||||| |||||||||| |||| |||||| ||||||| |||||||||||||| || |||||||||||||||    
T  15926379 gagtttacgttttttggtaccaaaatcgtgtcaactcggaggttaactcgatttctggtaaaatcgcaatgtttgacgagtttga 15926463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 353 - 464
Target Start/End: Complemental strand, 215049 - 214938
Alignment:
Q  353 caatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggta 452  Q
    |||||| |||||||| ||||||||||| |||||| |||  || ||||| ||||||||||| |||||||||||||||   ||||||||||   ||||||||    
T  215049 caatgttccgcaaattgagtgttaactttccgagattaccgaatttacgtttttaggtaccaaaatcgtgttaactctaaggtaaactcagtttctggta 214950  T
Q  453 aaatcggaaggt 464  Q
    ||||| ||||||    
T  214949 aaatcagaaggt 214938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 354 - 418
Target Start/End: Original strand, 3464051 - 3464115
Alignment:
Q  354 aatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaat 418  Q
    ||||| |||||||||| |||||||||||||||| |||  ||||||||||||||||||||||||||    
T  3464051 aatgttccgcaaatcgtgtgttaactctccgagattaccgagtttacatttttaggtacaaaaat 3464115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 364 - 475
Target Start/End: Complemental strand, 3858551 - 3858440
Alignment:
Q  364 aaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggtaaaatcggaagg 463  Q
    |||| |||||||||||| ||||||| |  || ||||| |||||| ||   ||||| |||| |||||| |||||||||||| || |||||||||||||| |    
T  3858551 aaattgagtgttaactcgccgagttaaccgaatttacgtttttaagtgtcaaaattgtgtcaacttgaaggtaaactcgatttttggtaaaatcggaatg 3858452  T
Q  464 tttgacgagttt 475  Q
    ||||||||||||    
T  3858451 tttgacgagttt 3858440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 270 - 339
Target Start/End: Original strand, 24047328 - 24047398
Alignment:
Q  270 catatgatattttagtctatgtttttagttactttcattgcatttaaaggaaaataaga-gttatttagag 339  Q
    ||||||||||||||| ||||||||||||||| |||  |||||||| ||||||||||||| |||||||||||    
T  24047328 catatgatattttaggctatgtttttagttattttatttgcatttgaaggaaaataagaggttatttagag 24047398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 393 - 482
Target Start/End: Original strand, 13898477 - 13898566
Alignment:
Q  393 gagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggtaaaatcggaaggtttgacgagtttgatcgag 482  Q
    |||||||| ||||||||    |||| |||||||||| |||||||||||||| || |||| ||||||||| ||||||||||||||| ||||    
T  13898477 gagtttacgtttttaggcggcaaaaacgtgttaactcggaggtaaactcgatttttggtgaaatcggaaagtttgacgagtttgaccgag 13898566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 393 - 482
Target Start/End: Original strand, 14039094 - 14039183
Alignment:
Q  393 gagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggtaaaatcggaaggtttgacgagtttgatcgag 482  Q
    |||||||| ||||||||    |||| |||||||||| |||||||||||||| || |||| ||||||||| ||||||||||||||| ||||    
T  14039094 gagtttacgtttttaggcggcaaaaacgtgttaactcggaggtaaactcgatttttggtgaaatcggaaagtttgacgagtttgaccgag 14039183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 393 - 482
Target Start/End: Original strand, 19948539 - 19948628
Alignment:
Q  393 gagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggtaaaatcggaaggtttgacgagtttgatcgag 482  Q
    ||||||||||||||||||   |||| |||||||||| ||||||||||||   || |||| ||||||||| ||||||||||||||| ||||    
T  19948539 gagtttacatttttaggtggcaaaaacgtgttaactcggaggtaaactcagtttttggtgaaatcggaaagtttgacgagtttgaccgag 19948628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 393 - 477
Target Start/End: Complemental strand, 32242306 - 32242222
Alignment:
Q  393 gagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggtaaaatcggaaggtttgacgagtttga 477  Q
    ||||||||||||| || ||| |||||||||||||||  |||||||||| || |||| |||||||| ||| |||| ||||||||||    
T  32242306 gagtttacattttgagataccaaaatcgtgttaactctgaggtaaacttgatttcttgtaaaatcagaatgtttaacgagtttga 32242222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 256 - 319
Target Start/End: Complemental strand, 18236485 - 18236422
Alignment:
Q  256 tgatgacagagcatcatatgatattttagtctatgtttttagttactttcattgcatttaaagg 319  Q
    ||||||| ||||||||||||||||||||  ||||||||||||||| |||| |||||||| ||||    
T  18236485 tgatgacggagcatcatatgatattttatgctatgtttttagttattttctttgcatttgaagg 18236422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 408 - 475
Target Start/End: Complemental strand, 18727732 - 18727665
Alignment:
Q  408 ggtacaaaaatcgtgttaacttggaggtaaactcgacttctggtaaaatcggaaggtttgacgagttt 475  Q
    ||||| |||| |||||||||| |||||||||||||| |||||||||||||  || |||||||||||||    
T  18727732 ggtaccaaaaccgtgttaactcggaggtaaactcgaattctggtaaaatcaaaaagtttgacgagttt 18727665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 396 - 482
Target Start/End: Complemental strand, 11153447 - 11153361
Alignment:
Q  396 tttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggtaaaatcggaaggtttgacgagtttgatcgag 482  Q
    ||||| ||||||||| |  |||||||||||||| |||||||||||||  ||||||||||||||  | ||||| ||||||||| ||||    
T  11153447 tttacgtttttaggtgctgaaatcgtgttaactcggaggtaaactcggtttctggtaaaatcgagatgtttggcgagtttgaccgag 11153361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 393 - 482
Target Start/End: Original strand, 3991774 - 3991863
Alignment:
Q  393 gagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggtaaaatcggaaggtttgacgagtttgatcgag 482  Q
    |||||||| |||||||||   |||| |||||||||| |||||||||||||  || |||| |||||| || ||||||||||||||| ||||    
T  3991774 gagtttacgtttttaggtggcaaaaacgtgttaactcggaggtaaactcggtttttggtgaaatcgaaaagtttgacgagtttgaccgag 3991863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 393 - 482
Target Start/End: Complemental strand, 38413554 - 38413465
Alignment:
Q  393 gagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggtaaaatcggaaggtttgacgagtttgatcgag 482  Q
    |||||||| |||||||||   |||| ||||| |||| |||||||||||||  || |||| ||||||||| ||||||||||||||| ||||    
T  38413554 gagtttacgtttttaggtggcaaaaacgtgtaaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgag 38413465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 393 - 477
Target Start/End: Complemental strand, 1833806 - 1833722
Alignment:
Q  393 gagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggtaaaatcggaaggtttgacgagtttga 477  Q
    |||||||| ||||||||||  |||||||||| || ||||||||||| |||| ||||||||||||  ||| ||||  |||||||||    
T  1833806 gagtttacgtttttaggtaacaaaatcgtgtcaatttggaggtaaattcgatttctggtaaaataagaatgtttatcgagtttga 1833722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 393 - 477
Target Start/End: Original strand, 32293914 - 32293997
Alignment:
Q  393 gagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggtaaaatcggaaggtttgacgagtttga 477  Q
    |||||||| ||||| ||||| ||||||||||||| |  || ||||||| || |||| |||||||||||| |||||||||||||||    
T  32293914 gagtttacgttttt-ggtaccaaaatcgtgttaaatctgatgtaaactggatttcttgtaaaatcggaatgtttgacgagtttga 32293997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 445 - 497
Target Start/End: Complemental strand, 38295766 - 38295714
Alignment:
Q  445 ttctggtaaaatcggaaggtttgacgagtttgatcgagatagcactcggtaaa 497  Q
    ||||||||||||| ||||||||||||||||||| |||| || |||||||||||    
T  38295766 ttctggtaaaatcagaaggtttgacgagtttgaccgagttaacactcggtaaa 38295714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 254 - 324
Target Start/End: Original strand, 19540967 - 19541037
Alignment:
Q  254 actgatgacagagcatcatatgatattttagtctatgtttttagttactttcattgcatttaaaggaaaat 324  Q
    ||||||||  || |||||||||| ||||| | ||||||||||||||| |||| |||||||| |||||||||    
T  19540967 actgatgatggaacatcatatgagatttttgcctatgtttttagttattttctttgcatttgaaggaaaat 19541037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 420 - 497
Target Start/End: Original strand, 43078967 - 43079044
Alignment:
Q  420 gtgttaacttggaggtaaactcgacttctggtaaaatcggaaggtttgacgagtttgatcgagatagcactcggtaaa 497  Q
    |||||||||  ||||||||||||  ||||| ||||||| |||||||| ||||||||||| ||| || |||||| ||||    
T  43078967 gtgttaactctgaggtaaactcggtttctgttaaaatccgaaggtttaacgagtttgattgagttaacactcgataaa 43079044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 420 - 497
Target Start/End: Original strand, 43825317 - 43825394
Alignment:
Q  420 gtgttaacttggaggtaaactcgacttctggtaaaatcggaaggtttgacgagtttgatcgagatagcactcggtaaa 497  Q
    |||||||||  |||||||| |||  |||||||||||| ||||||||| ||||||||||  ||| || |||||||||||    
T  43825317 gtgttaactctgaggtaaaatcggtttctggtaaaattggaaggtttaacgagtttgactgagttaacactcggtaaa 43825394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 256 - 328
Target Start/End: Complemental strand, 21505322 - 21505250
Alignment:
Q  256 tgatgacagagcatcatatgatattttagtctatgtttttagttactttcattgcatttaaaggaaaataaga 328  Q
    ||||||| ||||||||||||||||||| | |||||||||||||   |||| |||||||| |||  ||||||||    
T  21505322 tgatgacggagcatcatatgatatttttggctatgtttttagtatttttctttgcatttgaagacaaataaga 21505250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 393 - 477
Target Start/End: Original strand, 33262854 - 33262938
Alignment:
Q  393 gagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggtaaaatcggaaggtttgacgagtttga 477  Q
    |||||||| |||||||||   |||| ||||| |||| | |||||||||||  || |||| ||||||||| |||||||||||||||    
T  33262854 gagtttacgtttttaggtggcaaaaacgtgtaaactcgaaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttga 33262938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 287 - 329
Target Start/End: Complemental strand, 32276665 - 32276623
Alignment:
Q  287 tatgtttttagttactttcattgcatttaaaggaaaataagag 329  Q
    |||||||||||||| |||| |||||||| ||||||||||||||    
T  32276665 tatgtttttagttattttctttgcatttgaaggaaaataagag 32276623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 305
Target Start/End: Complemental strand, 22164425 - 22164384
Alignment:
Q  264 gagcatcatatgatattttagtctatgtttttagttactttc 305  Q
    ||||||||||||||||||||| |||| |||||||||| ||||    
T  22164425 gagcatcatatgatattttaggctatatttttagttattttc 22164384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 414 - 471
Target Start/End: Original strand, 24025870 - 24025927
Alignment:
Q  414 aaaatcgtgttaacttggaggtaaactcgacttctggtaaaatcggaaggtttgacga 471  Q
    |||| ||||||||||||||| ||||||||  || |||||||||| ||| |||||||||    
T  24025870 aaaaacgtgttaacttggagataaactcggtttttggtaaaatcagaatgtttgacga 24025927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 305
Target Start/End: Original strand, 39730387 - 39730428
Alignment:
Q  264 gagcatcatatgatattttagtctatgtttttagttactttc 305  Q
    ||||||||||| ||||||||| ||||||||||||||| ||||    
T  39730387 gagcatcatataatattttaggctatgtttttagttattttc 39730428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 402 - 438
Target Start/End: Complemental strand, 5842905 - 5842869
Alignment:
Q  402 tttttaggtacaaaaatcgtgttaacttggaggtaaa 438  Q
    |||||||||| ||||||| ||||||||||||||||||    
T  5842905 tttttaggtataaaaatcatgttaacttggaggtaaa 5842869  T

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Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 393 - 469
Target Start/End: Original strand, 12877687 - 12877763
Alignment:
Q  393 gagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggtaaaatcggaaggtttgac 469  Q
    |||||||| |||||||||   |||| |||||||||| |||||||||||||  || || | ||||||||| |||||||    
T  12877687 gagtttacgtttttaggtggcaaaaacgtgttaactcggaggtaaactcggtttttgatgaaatcggaaagtttgac 12877763  T

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Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 256 - 328
Target Start/End: Complemental strand, 28278605 - 28278534
Alignment:
Q  256 tgatgacagagcatcatatgatattttagtctatgtttttagttactttcattgcatttaaaggaaaataaga 328  Q
    |||||||||||||||||||||||||||   ||||| |||||||   |||| |||||||| |||| ||||||||    
T  28278605 tgatgacagagcatcatatgatattttttgctatg-ttttagtacttttctttgcatttgaaggcaaataaga 28278534  T

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Target: scaffold1128 (Bit Score: 76; Significance: 6e-35; HSPs: 1)
Name: scaffold1128
Description:

Target: scaffold1128; HSP #1
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 351 - 482
Target Start/End: Complemental strand, 1046 - 915
Alignment:
Q  351 agcaatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctgg 450  Q
    |||||||| ||||||||||||||||||| ||| |||||||  |||||||| | ||||||||| ||||||||||||||| |||||||||||||  ||||||    
T  1046 agcaatgttccgcaaatcgagtgttaacactctgagtttaccgagtttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcggtttctgg 947  T
Q  451 taaaatcggaaggtttgacgagtttgatcgag 482  Q
    ||||||||||| |||||| |||||||| ||||    
T  946 taaaatcggaaagtttgatgagtttgaccgag 915  T

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Target: scaffold0110 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 361 - 490
Target Start/End: Complemental strand, 39419 - 39290
Alignment:
Q  361 cgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggtaaaatcgga 460  Q
    |||||||||||||||||||||||||| |||  |||||||| ||||||||||| ||||||||||||||   ||||| ||||||  |||||||||||||| |    
T  39419 cgcaaatcgagtgttaactctccgagattaccgagtttacgtttttaggtaccaaaatcgtgttaaccctgaggtcaactcggtttctggtaaaatcgaa 39320  T
Q  461 aggtttgacgagtttgatcgagatagcact 490  Q
    |||||||||||||||||  ||| |||||||    
T  39319 aggtttgacgagtttgactgagttagcact 39290  T

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Target: scaffold1504 (Bit Score: 69; Significance: 1e-30; HSPs: 1)
Name: scaffold1504
Description:

Target: scaffold1504; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 353 - 477
Target Start/End: Original strand, 1276 - 1400
Alignment:
Q  353 caatgtgccgcaaatcgagtgttaactctccgagtttatagagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggta 452  Q
    |||||| || |||||||||||||||||||||||| |||  |||||||| |||||||||||||||||||||||||||  |||||||| |||  |||| |||    
T  1276 caatgttccacaaatcgagtgttaactctccgagattaccgagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttcttgta 1375  T
Q  453 aaatcggaaggtttgacgagtttga 477  Q
    |||| ||||||||| ||||||||||    
T  1376 aaattggaaggtttaacgagtttga 1400  T

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Target: scaffold0573 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0573
Description:

Target: scaffold0573; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 393 - 467
Target Start/End: Original strand, 8857 - 8931
Alignment:
Q  393 gagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggtaaaatcggaaggtttg 467  Q
    |||||||||| ||||||||| |||||||||||||||  ||||||||||||| |||||||||||||||||||||||    
T  8857 gagtttacatgtttaggtaccaaaatcgtgttaactctgaggtaaactcgatttctggtaaaatcggaaggtttg 8931  T

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Target: scaffold0190 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 267 - 350
Target Start/End: Complemental strand, 11869 - 11785
Alignment:
Q  267 catcatatgatattttagtctatgtttttagttactttcattgcatttaaagg-aaaataagagttatttagaggagttatcaat 350  Q
    |||||||||||||||||| ||||||||||||||| |||  |||||||| |||| ||||||  ||| ||||||||||||| |||||    
T  11869 catcatatgatattttaggctatgtttttagttattttatttgcatttgaaggcaaaatagaagtcatttagaggagttgtcaat 11785  T

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Target: scaffold0421 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0421
Description:

Target: scaffold0421; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 420 - 482
Target Start/End: Original strand, 1727 - 1789
Alignment:
Q  420 gtgttaacttggaggtaaactcgacttctggtaaaatcggaaggtttgacgagtttgatcgag 482  Q
    ||||||||| |||||||||||||| || |||| ||||||||| ||||||||||||||| ||||    
T  1727 gtgttaactcggaggtaaactcgatttttggtgaaatcggaaagtttgacgagtttgaccgag 1789  T

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Target: scaffold0347 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 410 - 477
Target Start/End: Original strand, 15128 - 15195
Alignment:
Q  410 tacaaaaatcgtgttaacttggaggtaaactcgacttctggtaaaatcggaaggtttgacgagtttga 477  Q
    |||||||||||||||||||  |||||||| |||  || ||||||||| ||||||||| ||||||||||    
T  15128 tacaaaaatcgtgttaactctgaggtaaaatcggtttatggtaaaattggaaggtttaacgagtttga 15195  T

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Target: scaffold0246 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 393 - 475
Target Start/End: Original strand, 1368 - 1450
Alignment:
Q  393 gagtttacatttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggtaaaatcggaaggtttgacgagttt 475  Q
    |||||||| |||||||||   |||| | ||||||||||||||||||||||  || | || ||||||||| |||||||||||||    
T  1368 gagtttacgtttttaggtggcaaaaacatgttaacttggaggtaaactcggtttttagtgaaatcggaaagtttgacgagttt 1450  T

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Target: scaffold0383 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 420 - 477
Target Start/End: Complemental strand, 16754 - 16697
Alignment:
Q  420 gtgttaacttggaggtaaactcgacttctggtaaaatcggaaggtttgacgagtttga 477  Q
    |||||||||  ||||||||||||  |||||||||||||| ||||||| ||||||||||    
T  16754 gtgttaactctgaggtaaactcggtttctggtaaaatcgaaaggtttaacgagtttga 16697  T

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Target: scaffold0152 (Bit Score: 34; Significance: 0.0000000007; HSPs: 2)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 420 - 477
Target Start/End: Complemental strand, 20990 - 20933
Alignment:
Q  420 gtgttaacttggaggtaaactcgacttctggtaaaatcggaaggtttgacgagtttga 477  Q
    |||||||||  ||||||||||||  |||||||||||||| ||||||| ||||||||||    
T  20990 gtgttaactctgaggtaaactcggtttctggtaaaatcgaaaggtttaacgagtttga 20933  T

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Target: scaffold0152; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 420 - 477
Target Start/End: Original strand, 28811 - 28868
Alignment:
Q  420 gtgttaacttggaggtaaactcgacttctggtaaaatcggaaggtttgacgagtttga 477  Q
    |||||||||  ||||||||||||  |||||||||||||| ||||||| ||||||||||    
T  28811 gtgttaactctgaggtaaactcggtttctggtaaaatcgaaaggtttaacgagtttga 28868  T

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Target: scaffold0002 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 256 - 298
Target Start/End: Original strand, 446937 - 446978
Alignment:
Q  256 tgatgacagagcatcatatgatattttagtctatgtttttagt 298  Q
    ||||||||||||||||||||||||||| | |||||||||||||    
T  446937 tgatgacagagcatcatatgatatttttg-ctatgtttttagt 446978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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