View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16023_low_8 (Length: 410)

Name: NF16023_low_8
Description: NF16023
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16023_low_8
NF16023_low_8
[»] chr8 (31 HSPs)
chr8 (1-394)||(1886279-1886672)
chr8 (343-394)||(3890421-3890472)
chr8 (343-394)||(30834862-30834913)
chr8 (343-394)||(10044556-10044606)
chr8 (343-394)||(20091608-20091658)
chr8 (343-394)||(27782119-27782170)
chr8 (343-394)||(31347583-31347633)
chr8 (343-394)||(32064757-32064808)
chr8 (343-394)||(34665394-34665445)
chr8 (343-394)||(34665589-34665639)
chr8 (355-394)||(37132487-37132526)
chr8 (343-394)||(37985863-37985913)
chr8 (343-394)||(38016983-38017034)
chr8 (343-394)||(42755044-42755095)
chr8 (343-394)||(1503650-1503700)
chr8 (343-394)||(7021990-7022041)
chr8 (343-394)||(14129067-14129117)
chr8 (343-394)||(15187572-15187623)
chr8 (343-394)||(17841657-17841707)
chr8 (343-394)||(17841852-17841903)
chr8 (343-394)||(20091803-20091854)
chr8 (343-394)||(24211179-24211229)
chr8 (343-394)||(24211555-24211606)
chr8 (343-394)||(24844667-24844718)
chr8 (343-394)||(26041920-26041970)
chr8 (343-394)||(31347784-31347835)
chr8 (343-394)||(32393870-32393921)
chr8 (343-394)||(35353249-35353299)
chr8 (355-394)||(38017153-38017191)
chr8 (343-394)||(40779936-40779986)
chr8 (343-394)||(40780131-40780182)
[»] chr6 (16 HSPs)
chr6 (343-394)||(29693653-29693704)
chr6 (343-394)||(8515727-8515778)
chr6 (343-394)||(33695329-33695380)
chr6 (343-394)||(33696708-33696759)
chr6 (343-394)||(6127287-6127338)
chr6 (343-394)||(11548396-11548446)
chr6 (343-394)||(11548590-11548641)
chr6 (355-394)||(17175828-17175866)
chr6 (355-394)||(17705276-17705314)
chr6 (343-394)||(18365575-18365626)
chr6 (343-394)||(18370839-18370890)
chr6 (343-394)||(23291086-23291137)
chr6 (355-394)||(28675368-28675406)
chr6 (343-394)||(33696905-33696955)
chr6 (355-394)||(34238894-34238932)
chr6 (345-394)||(2121016-2121065)
[»] chr4 (29 HSPs)
chr4 (343-394)||(25063381-25063432)
chr4 (343-394)||(37219839-37219890)
chr4 (343-394)||(33530690-33530741)
chr4 (355-394)||(42671888-42671927)
chr4 (343-394)||(10442594-10442644)
chr4 (343-394)||(10442791-10442842)
chr4 (355-394)||(11314058-11314097)
chr4 (343-394)||(22199273-22199324)
chr4 (343-394)||(24392679-24392730)
chr4 (343-394)||(31078821-31078872)
chr4 (343-394)||(36072959-36073010)
chr4 (343-394)||(49387890-49387941)
chr4 (343-394)||(2624849-2624900)
chr4 (343-394)||(4751458-4751509)
chr4 (355-394)||(7744919-7744957)
chr4 (343-394)||(7745114-7745165)
chr4 (343-394)||(9089078-9089128)
chr4 (355-394)||(17655650-17655689)
chr4 (355-394)||(21802127-21802165)
chr4 (343-394)||(21802324-21802375)
chr4 (343-394)||(22199467-22199517)
chr4 (343-394)||(23964271-23964321)
chr4 (343-394)||(24128251-24128302)
chr4 (343-394)||(36073362-36073413)
chr4 (343-394)||(36073557-36073607)
chr4 (343-394)||(46442052-46442102)
chr4 (343-394)||(47290078-47290129)
chr4 (343-394)||(53123239-53123289)
chr4 (365-394)||(53998991-53999020)
[»] chr3 (29 HSPs)
chr3 (343-394)||(47738319-47738370)
chr3 (355-394)||(33839755-33839794)
chr3 (355-394)||(40328051-40328090)
chr3 (343-394)||(46919102-46919153)
chr3 (343-395)||(30385608-30385659)
chr3 (343-395)||(47738116-47738168)
chr3 (343-394)||(9797031-9797082)
chr3 (343-394)||(22426152-22426202)
chr3 (355-394)||(24343769-24343808)
chr3 (343-394)||(33114002-33114052)
chr3 (355-394)||(36864839-36864878)
chr3 (343-394)||(2754729-2754780)
chr3 (343-394)||(3137221-3137271)
chr3 (355-394)||(3456284-3456322)
chr3 (343-394)||(3574529-3574580)
chr3 (343-394)||(6041896-6041947)
chr3 (343-394)||(6042085-6042135)
chr3 (343-394)||(8320389-8320439)
chr3 (355-394)||(9796836-9796874)
chr3 (343-394)||(11347280-11347331)
chr3 (343-394)||(26612954-26613005)
chr3 (355-394)||(33145932-33145970)
chr3 (343-394)||(34482695-34482745)
chr3 (355-394)||(37216860-37216898)
chr3 (343-394)||(37217055-37217106)
chr3 (343-394)||(41224442-41224492)
chr3 (343-393)||(30385024-30385074)
chr3 (349-394)||(42921339-42921384)
chr3 (355-391)||(41883031-41883067)
[»] chr1 (22 HSPs)
chr1 (343-394)||(44690828-44690879)
chr1 (344-394)||(52064384-52064434)
chr1 (358-394)||(27523062-27523098)
chr1 (343-394)||(16045800-16045851)
chr1 (343-394)||(20304937-20304987)
chr1 (343-394)||(32000073-32000123)
chr1 (343-394)||(33786438-33786488)
chr1 (343-394)||(33786637-33786687)
chr1 (343-394)||(40215000-40215051)
chr1 (343-394)||(40215196-40215246)
chr1 (343-394)||(9910098-9910148)
chr1 (343-394)||(9910295-9910346)
chr1 (343-394)||(18404656-18404706)
chr1 (343-394)||(19015612-19015662)
chr1 (355-394)||(19722906-19722944)
chr1 (343-394)||(25463884-25463934)
chr1 (343-394)||(32000269-32000320)
chr1 (343-394)||(40273916-40273966)
chr1 (343-394)||(44094710-44094761)
chr1 (343-394)||(44691031-44691082)
chr1 (343-394)||(51737713-51737763)
chr1 (344-394)||(6883696-6883745)
[»] chr2 (19 HSPs)
chr2 (343-394)||(14941368-14941419)
chr2 (355-394)||(22592932-22592971)
chr2 (343-394)||(9293578-9293629)
chr2 (342-394)||(31174642-31174693)
chr2 (355-394)||(9293382-9293420)
chr2 (343-394)||(9723614-9723665)
chr2 (343-394)||(10661899-10661950)
chr2 (343-394)||(13354858-13354909)
chr2 (343-394)||(13355056-13355106)
chr2 (343-394)||(21936093-21936144)
chr2 (343-394)||(23268064-23268115)
chr2 (343-394)||(27847644-27847695)
chr2 (343-394)||(31174836-31174887)
chr2 (343-394)||(33380415-33380465)
chr2 (343-394)||(35160769-35160820)
chr2 (343-394)||(35160967-35161017)
chr2 (343-394)||(43330924-43330975)
chr2 (355-394)||(43331132-43331170)
chr2 (343-395)||(22591493-22591545)
[»] scaffold0228 (5 HSPs)
scaffold0228 (343-394)||(8414-8465)
scaffold0228 (343-394)||(15996-16047)
scaffold0228 (343-394)||(25948-25999)
scaffold0228 (343-394)||(16192-16242)
scaffold0228 (343-394)||(26144-26194)
[»] chr7 (19 HSPs)
chr7 (343-394)||(4974737-4974788)
chr7 (343-394)||(15577852-15577903)
chr7 (343-394)||(34483046-34483096)
chr7 (343-394)||(42611823-42611874)
chr7 (343-394)||(45637724-45637775)
chr7 (358-394)||(29737367-29737403)
chr7 (343-394)||(4974542-4974592)
chr7 (343-394)||(15329285-15329336)
chr7 (343-394)||(18036990-18037041)
chr7 (355-394)||(20009905-20009944)
chr7 (343-394)||(24394984-24395035)
chr7 (343-394)||(24395179-24395229)
chr7 (343-394)||(25167663-25167713)
chr7 (343-394)||(36790468-36790519)
chr7 (343-394)||(37477082-37477133)
chr7 (343-394)||(45637919-45637969)
chr7 (343-394)||(48880734-48880784)
chr7 (343-394)||(48880929-48880980)
chr7 (355-395)||(36790282-36790322)
[»] chr5 (21 HSPs)
chr5 (343-394)||(8145387-8145438)
chr5 (343-394)||(8145581-8145631)
chr5 (343-394)||(22912864-22912914)
chr5 (343-394)||(22913056-22913107)
chr5 (343-395)||(10458408-10458460)
chr5 (343-394)||(2477648-2477699)
chr5 (343-394)||(3362790-3362841)
chr5 (343-394)||(4892410-4892460)
chr5 (343-394)||(6043513-6043564)
chr5 (343-394)||(11361133-11361184)
chr5 (343-394)||(12614544-12614595)
chr5 (355-394)||(12614747-12614786)
chr5 (343-394)||(12851010-12851060)
chr5 (343-394)||(14138680-14138731)
chr5 (343-394)||(14138875-14138925)
chr5 (343-378)||(31640763-31640798)
chr5 (343-378)||(31640942-31640977)
chr5 (343-394)||(33584136-33584186)
chr5 (343-394)||(38899532-38899583)
chr5 (343-394)||(38899728-38899779)
chr5 (355-389)||(27482043-27482077)
[»] scaffold0085 (2 HSPs)
scaffold0085 (343-393)||(47863-47913)
scaffold0085 (355-394)||(48069-48107)
[»] scaffold0471 (1 HSPs)
scaffold0471 (343-394)||(12854-12905)
[»] scaffold0178 (1 HSPs)
scaffold0178 (343-394)||(11633-11684)
[»] scaffold0096 (1 HSPs)
scaffold0096 (343-394)||(41023-41074)


Alignment Details
Target: chr8 (Bit Score: 394; Significance: 0; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 394; E-Value: 0
Query Start/End: Original strand, 1 - 394
Target Start/End: Original strand, 1886279 - 1886672
Alignment:
Q  1 cttttgtgttggccggaccgaatggatattgatattgatgttgatctcctcttcttgatattgatgttggagtggcgcttaagttgttaaaggctatgga 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1886279 cttttgtgttggccggaccgaatggatattgatattgatgttgatctcctcttcttgatattgatgttggagtggcgcttaagttgttaaaggctatgga 1886378  T
Q  101 ataggcaagagagttacaattgtagaacatgtatttcgaggtagacgccaagacaattgtagacaacatatatgggaagcagatcggtgtatcggaatat 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1886379 ataggcaagagagttacaattgtagaacatgtatttcgaggtagacgccaagacaattgtagacaacatatatgggaagcagatcggtgtatcggaatat 1886478  T
Q  201 aatgaaataattagtaaatgtgcttatatgtcaaattcattaggagacaatcaaaccaaactgcttatgggttagctagggtggctcctacggaaactag 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1886479 aatgaaataattagtaaatgtgcttatatgtcaaattcattaggagacaatcaaaccaaactgcttatgggttagctagggtggctcctacggaaactag 1886578  T
Q  301 tttccatgtttattctcacatcccaacatgtattgaatctatttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1886579 tttccatgtttattctcacatcccaacatgtattgaatctatttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 1886672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 343 - 394
Target Start/End: Complemental strand, 3890472 - 3890421
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    |||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  3890472 ttattctgccatatcattcttgaatctttcttgataaaatcattcttgatat 3890421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 343 - 394
Target Start/End: Complemental strand, 30834913 - 30834862
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    |||||||| || ||||||||| ||||||||||||||||||||||||||||||    
T  30834913 ttattctgtcatgtcattctttaatctttcttgataaaatcattcttgatat 30834862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 343 - 394
Target Start/End: Original strand, 10044556 - 10044606
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    ||||| ||||| |||||||||||||||||||| |||||||||||||||||||    
T  10044556 ttattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 10044606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 343 - 394
Target Start/End: Complemental strand, 20091658 - 20091608
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    ||||| ||||| |||||||||||||||||||| |||||||||||||||||||    
T  20091658 ttattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 20091608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 343 - 394
Target Start/End: Original strand, 27782119 - 27782170
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    ||||||||||| |||||| |||||||||||||||||||||  ||||||||||    
T  27782119 ttattctgccatgtcattattgaatctttcttgataaaatatttcttgatat 27782170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 343 - 394
Target Start/End: Complemental strand, 31347633 - 31347583
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    ||||| ||||| ||||||||||||||||||||||| ||||||||||||||||    
T  31347633 ttattgtgccatgtcattcttgaatctttcttgat-aaatcattcttgatat 31347583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 343 - 394
Target Start/End: Complemental strand, 32064808 - 32064757
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    ||||||||||| ||||||||||||  ||||||||||||||| ||||||||||    
T  32064808 ttattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 32064757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 343 - 394
Target Start/End: Complemental strand, 34665445 - 34665394
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    ||||||||||| ||||||||||||  ||||||||||||||| ||||||||||    
T  34665445 ttattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 34665394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 343 - 394
Target Start/End: Original strand, 34665589 - 34665639
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    ||||| ||||| |||||||||||||||||||| |||||||||||||||||||    
T  34665589 ttattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 34665639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 355 - 394
Target Start/End: Complemental strand, 37132526 - 37132487
Alignment:
Q  355 gtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    ||||||| ||||||||||||||||||||||||||||||||    
T  37132526 gtcattcatgaatctttcttgataaaatcattcttgatat 37132487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 343 - 394
Target Start/End: Complemental strand, 37985913 - 37985863
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    ||||| ||||| |||||||||||||||||||| |||||||||||||||||||    
T  37985913 ttattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 37985863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 343 - 394
Target Start/End: Complemental strand, 38017034 - 38016983
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    ||||||||||| ||||||||||||  ||||||||||||||| ||||||||||    
T  38017034 ttattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 38016983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 343 - 394
Target Start/End: Original strand, 42755044 - 42755095
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    ||||||||||| ||||||||||||  ||||||||||||||| ||||||||||    
T  42755044 ttattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 42755095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 343 - 394
Target Start/End: Complemental strand, 1503700 - 1503650
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    ||||| ||||| ||||||||||||| |||||| |||||||||||||||||||    
T  1503700 ttattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatat 1503650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 343 - 394
Target Start/End: Complemental strand, 7022041 - 7021990
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    |||||||||||  |||||||||||| |||||||| |||||| ||||||||||    
T  7022041 ttattctgccatatcattcttgaatttttcttgagaaaatctttcttgatat 7021990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 343 - 394
Target Start/End: Original strand, 14129067 - 14129117
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    ||||| ||||| ||||||||||||| |||||| |||||||||||||||||||    
T  14129067 ttattgtgccatgtcattcttgaatatttctt-ataaaatcattcttgatat 14129117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 343 - 394
Target Start/End: Complemental strand, 15187623 - 15187572
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    |||||||||||  |||||||||||  ||||||||||||||| ||||||||||    
T  15187623 ttattctgccatatcattcttgaaattttcttgataaaatctttcttgatat 15187572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 343 - 394
Target Start/End: Complemental strand, 17841707 - 17841657
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    ||||| ||||| ||||||||||||| |||||| |||||||||||||||||||    
T  17841707 ttattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatat 17841657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 343 - 394
Target Start/End: Original strand, 17841852 - 17841903
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    ||||||||||| ||||||||||||  |||||||| |||||| ||||||||||    
T  17841852 ttattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatat 17841903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 343 - 394
Target Start/End: Original strand, 20091803 - 20091854
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    ||||||||||| ||||||||||||  ||||||||||||||  ||||||||||    
T  20091803 ttattctgccatgtcattcttgaaattttcttgataaaatatttcttgatat 20091854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 343 - 394
Target Start/End: Complemental strand, 24211229 - 24211179
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    ||||| ||||| |||||||||| ||||||||| |||||||||||||||||||    
T  24211229 ttattgtgccatgtcattcttggatctttctt-ataaaatcattcttgatat 24211179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 343 - 394
Target Start/End: Original strand, 24211555 - 24211606
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    ||||||||||| | ||||||||||  ||||||||||||||| ||||||||||    
T  24211555 ttattctgccatgccattcttgaaattttcttgataaaatctttcttgatat 24211606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 343 - 394
Target Start/End: Complemental strand, 24844718 - 24844667
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    ||||| ||||| | ||||||| |||||||||||||||||||||| |||||||    
T  24844718 ttattttgccatgccattcttaaatctttcttgataaaatcattattgatat 24844667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 343 - 394
Target Start/End: Complemental strand, 26041970 - 26041920
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    ||||| ||||| ||||||||||||| |||||| |||||||||||||||||||    
T  26041970 ttattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatat 26041920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 343 - 394
Target Start/End: Original strand, 31347784 - 31347835
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    ||||||||||| ||||||||||||| |||||||| |||||  ||||||||||    
T  31347784 ttattctgccatgtcattcttgaatttttcttgagaaaatatttcttgatat 31347835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 343 - 394
Target Start/End: Complemental strand, 32393921 - 32393870
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    ||||||||||| ||||||||| ||  ||||||||||||||| ||||||||||    
T  32393921 ttattctgccatgtcattcttaaaattttcttgataaaatctttcttgatat 32393870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 343 - 394
Target Start/End: Original strand, 35353249 - 35353299
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    ||||| ||||| ||||||||||||| |||||| |||||||||||||||||||    
T  35353249 ttattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatat 35353299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 355 - 394
Target Start/End: Original strand, 38017153 - 38017191
Alignment:
Q  355 gtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  38017153 gtcattcttgaatctttctt-ataaaatcattcttgatat 38017191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 343 - 394
Target Start/End: Complemental strand, 40779986 - 40779936
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    ||||| ||||| ||||||||||||| |||||| |||||||||||||||||||    
T  40779986 ttattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatat 40779936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 343 - 394
Target Start/End: Original strand, 40780131 - 40780182
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    ||||||||||| ||||||||||||  |||||||| |||||| ||||||||||    
T  40780131 ttattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatat 40780182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 44; Significance: 6e-16; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 343 - 394
Target Start/End: Original strand, 29693653 - 29693704
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||||||||||    
T  29693653 ttattctgccatgtcattcttaaatctttcttgataaaatcattcttgatat 29693704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 343 - 394
Target Start/End: Original strand, 8515727 - 8515778
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    ||||||||||| ||||||||| ||||| ||||||||||||| ||||||||||    
T  8515727 ttattctgccatgtcattcttaaatctgtcttgataaaatctttcttgatat 8515778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 343 - 394
Target Start/End: Original strand, 33695329 - 33695380
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    ||||||||||| ||||||||||||  ||||||||||||||| ||||||||||    
T  33695329 ttattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 33695380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 343 - 394
Target Start/End: Complemental strand, 33696759 - 33696708
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    ||||||||||| ||||||||||||  ||||||||||||||| ||||||||||    
T  33696759 ttattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 33696708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 343 - 394
Target Start/End: Complemental strand, 6127338 - 6127287
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    ||||||||||| ||||||||| ||  ||||||||||||||| ||||||||||    
T  6127338 ttattctgccatgtcattcttaaaattttcttgataaaatctttcttgatat 6127287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 343 - 394
Target Start/End: Complemental strand, 11548446 - 11548396
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    ||||| ||||| |||||||||||||| |||||||| ||||||||||||||||    
T  11548446 ttattgtgccatgtcattcttgaatcgttcttgat-aaatcattcttgatat 11548396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 343 - 394
Target Start/End: Original strand, 11548590 - 11548641
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    ||||||||||| ||||||||||||| |||||||| |||||  ||||||||||    
T  11548590 ttattctgccatgtcattcttgaatttttcttgagaaaatttttcttgatat 11548641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 355 - 394
Target Start/End: Complemental strand, 17175866 - 17175828
Alignment:
Q  355 gtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  17175866 gtcattcttgaatctttctt-ataaaatcattcttgatat 17175828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 355 - 394
Target Start/End: Complemental strand, 17705314 - 17705276
Alignment:
Q  355 gtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  17705314 gtcattcttgaatctttctt-ataaaatcattcttgatat 17705276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 343 - 394
Target Start/End: Original strand, 18365575 - 18365626
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    ||||||||||| ||||||||||||  ||| ||||||||||| ||||||||||    
T  18365575 ttattctgccatgtcattcttgaaatttttttgataaaatctttcttgatat 18365626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 343 - 394
Target Start/End: Original strand, 18370839 - 18370890
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    ||||||||||| ||||||||||||  ||| ||||||||||| ||||||||||    
T  18370839 ttattctgccatgtcattcttgaaatttttttgataaaatctttcttgatat 18370890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 343 - 394
Target Start/End: Original strand, 23291086 - 23291137
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    ||||||||||| ||||||||| ||  ||||||||||||||| ||||||||||    
T  23291086 ttattctgccatgtcattcttaaaattttcttgataaaatctttcttgatat 23291137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 355 - 394
Target Start/End: Original strand, 28675368 - 28675406
Alignment:
Q  355 gtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  28675368 gtcattcttgaatctttctt-ataaaatcattcttgatat 28675406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 343 - 394
Target Start/End: Original strand, 33696905 - 33696955
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    ||||| ||||| ||||||||| |||||||||| |||||||||||||||||||    
T  33696905 ttattgtgccatgtcattcttaaatctttctt-ataaaatcattcttgatat 33696955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 355 - 394
Target Start/End: Complemental strand, 34238932 - 34238894
Alignment:
Q  355 gtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  34238932 gtcattcttgaatctt-cttgataaaatcattcttgatat 34238894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 345 - 394
Target Start/End: Complemental strand, 2121065 - 2121016
Alignment:
Q  345 attctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    ||||| ||| ||||||||||||||||| || ||||||||||| |||||||    
T  2121065 attctaccatgtcattcttgaatctttttttataaaatcatttttgatat 2121016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 44; Significance: 6e-16; HSPs: 29)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 343 - 394
Target Start/End: Complemental strand, 25063432 - 25063381
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    ||||||| ||| ||||||||||||||||||||||||||||||||||||||||    
T  25063432 ttattctaccatgtcattcttgaatctttcttgataaaatcattcttgatat 25063381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 343 - 394
Target Start/End: Original strand, 37219839 - 37219890
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||||||||||    
T  37219839 ttattctgccatgtcattcttaaatctttcttgataaaatcattcttgatat 37219890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 343 - 394
Target Start/End: Original strand, 33530690 - 33530741
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    ||||||||||| ||||||||||||| ||||||||||||||| ||||||||||    
T  33530690 ttattctgccatgtcattcttgaatttttcttgataaaatctttcttgatat 33530741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 355 - 394
Target Start/End: Original strand, 42671888 - 42671927
Alignment:
Q  355 gtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  42671888 gtcattcttgaatctttcttgataaaatcattcttgatat 42671927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 343 - 394
Target Start/End: Complemental strand, 10442644 - 10442594
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    ||||| ||||| |||||||||||||||||||| |||||||||||||||||||    
T  10442644 ttattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 10442594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 343 - 394
Target Start/End: Original strand, 10442791 - 10442842
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    ||||||||||| ||||||||||||  ||||||||||||||| ||||||||||    
T  10442791 ttattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 10442842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 355 - 394
Target Start/End: Complemental strand, 11314097 - 11314058
Alignment:
Q  355 gtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    |||||||||| |||||||||||||||||||||||||||||    
T  11314097 gtcattcttgcatctttcttgataaaatcattcttgatat 11314058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 343 - 394
Target Start/End: Complemental strand, 22199324 - 22199273
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    ||||||||||| ||||||||||||  ||||||||||||||| ||||||||||    
T  22199324 ttattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 22199273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 343 - 394
Target Start/End: Complemental strand, 24392730 - 24392679
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    ||||||||||| ||||||||||||| |||||||| |||||| ||||||||||    
T  24392730 ttattctgccatgtcattcttgaatttttcttgagaaaatctttcttgatat 24392679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 343 - 394
Target Start/End: Original strand, 31078821 - 31078872
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    ||||||||||| ||||||||||||  ||||||||||||||| ||||||||||    
T  31078821 ttattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 31078872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 343 - 394
Target Start/End: Complemental strand, 36073010 - 36072959
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    ||||||||||| ||||||||||||  ||||||||||||||| ||||||||||    
T  36073010 ttattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 36072959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 343 - 394
Target Start/End: Original strand, 49387890 - 49387941
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    ||||||||||| ||||||||||||  ||||||||||||||| ||||||||||    
T  49387890 ttattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 49387941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 343 - 394
Target Start/End: Complemental strand, 2624900 - 2624849
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    |||||||||||  |||||||||||  ||||||||||||||| ||||||||||    
T  2624900 ttattctgccatttcattcttgaaattttcttgataaaatctttcttgatat 2624849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 343 - 394
Target Start/End: Complemental strand, 4751509 - 4751458
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    ||||||||||| |||||||||| |  ||||||||||||||| ||||||||||    
T  4751509 ttattctgccatgtcattcttggaattttcttgataaaatctttcttgatat 4751458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 355 - 394
Target Start/End: Complemental strand, 7744957 - 7744919
Alignment:
Q  355 gtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  7744957 gtcattcttgaatctttctt-ataaaatcattcttgatat 7744919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 343 - 394
Target Start/End: Original strand, 7745114 - 7745165
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    ||||||||||| ||||||||| ||  ||||||||||||||| ||||||||||    
T  7745114 ttattctgccatgtcattcttaaaattttcttgataaaatctttcttgatat 7745165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 343 - 394
Target Start/End: Original strand, 9089078 - 9089128
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    ||||| ||||| ||||||||||||| |||||| |||||||||||||||||||    
T  9089078 ttattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatat 9089128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 355 - 394
Target Start/End: Original strand, 17655650 - 17655689
Alignment:
Q  355 gtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    ||||||||| ||||||||||||||||||||||||| ||||    
T  17655650 gtcattcttaaatctttcttgataaaatcattcttaatat 17655689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 355 - 394
Target Start/End: Complemental strand, 21802165 - 21802127
Alignment:
Q  355 gtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  21802165 gtcattcttgaatctttctt-ataaaatcattcttgatat 21802127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 343 - 394
Target Start/End: Original strand, 21802324 - 21802375
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    ||||||||||| ||||||||||||  ||||||||||||||  ||||||||||    
T  21802324 ttattctgccatgtcattcttgaaattttcttgataaaatatttcttgatat 21802375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 343 - 394
Target Start/End: Original strand, 22199467 - 22199517
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    ||||| ||||| |||||||||| ||||||||| |||||||||||||||||||    
T  22199467 ttattgtgccatgtcattcttggatctttctt-ataaaatcattcttgatat 22199517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 343 - 394
Target Start/End: Complemental strand, 23964321 - 23964271
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    ||||| ||||| ||||||||| |||||||||| |||||||||||||||||||    
T  23964321 ttattatgccatgtcattcttaaatctttctt-ataaaatcattcttgatat 23964271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 343 - 394
Target Start/End: Complemental strand, 24128302 - 24128251
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    ||||||||||| ||||||||||||  |||||||| |||||| ||||||||||    
T  24128302 ttattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatat 24128251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 343 - 394
Target Start/End: Complemental strand, 36073413 - 36073362
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    ||||||||||| ||||||||||||  |||||||| |||||| ||||||||||    
T  36073413 ttattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatat 36073362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 343 - 394
Target Start/End: Original strand, 36073557 - 36073607
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    ||||| ||||| ||||||||||||| |||||| |||||||||||||||||||    
T  36073557 ttattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatat 36073607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 343 - 394
Target Start/End: Original strand, 46442052 - 46442102
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    ||||| ||||| ||||||||||||| |||||| |||||||||||||||||||    
T  46442052 ttattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatat 46442102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 343 - 394
Target Start/End: Complemental strand, 47290129 - 47290078
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    ||||||||||| ||||||||||||  |||||||| |||||| ||||||||||    
T  47290129 ttattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatat 47290078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 343 - 394
Target Start/End: Original strand, 53123239 - 53123289
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    ||||| ||||| ||||||||||||| |||||| |||||||||||||||||||    
T  53123239 ttattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatat 53123289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 365 - 394
Target Start/End: Complemental strand, 53999020 - 53998991
Alignment:
Q  365 aatctttcttgataaaatcattcttgatat 394  Q
    ||||||||||||||||||||||||||||||    
T  53999020 aatctttcttgataaaatcattcttgatat 53998991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 44; Significance: 6e-16; HSPs: 29)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 343 - 394
Target Start/End: Original strand, 47738319 - 47738370
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||||||||||    
T  47738319 ttattgtgccatgtcattcttgaatctttcttgataaaatcattcttgatat 47738370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 355 - 394
Target Start/End: Original strand, 33839755 - 33839794
Alignment:
Q  355 gtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  33839755 gtcattcttgaatctttcttgataaaatcattcttgatat 33839794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 355 - 394
Target Start/End: Original strand, 40328051 - 40328090
Alignment:
Q  355 gtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  40328051 gtcattcttgaatctttcttgataaaatcattcttgatat 40328090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 343 - 394
Target Start/End: Original strand, 46919102 - 46919153
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    ||||||||||| |||||| |||||||||| ||||||||||||||||||||||    
T  46919102 ttattctgccatgtcattattgaatcttttttgataaaatcattcttgatat 46919153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 343 - 395
Target Start/End: Original strand, 30385608 - 30385659
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatatt 395  Q
    ||||| ||||| |||||||||||||||||||| ||||||||||||||||||||    
T  30385608 ttattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatt 30385659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 343 - 395
Target Start/End: Complemental strand, 47738168 - 47738116
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatatt 395  Q
    |||||||||||  |||||||||||| ||||||||||||||| |||||||||||    
T  47738168 ttattctgccatatcattcttgaatatttcttgataaaatctttcttgatatt 47738116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 343 - 394
Target Start/End: Original strand, 9797031 - 9797082
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    ||||||||||| ||||||||||||| |||||||| |||||| ||||||||||    
T  9797031 ttattctgccatgtcattcttgaatttttcttgagaaaatctttcttgatat 9797082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 343 - 394
Target Start/End: Complemental strand, 22426202 - 22426152
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    ||||| ||||| |||||||||||||||||||| |||||||||||||||||||    
T  22426202 ttattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 22426152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 355 - 394
Target Start/End: Original strand, 24343769 - 24343808
Alignment:
Q  355 gtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    ||||||||||||||||| ||||||||||||||||||||||    
T  24343769 gtcattcttgaatcttttttgataaaatcattcttgatat 24343808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 343 - 394
Target Start/End: Original strand, 33114002 - 33114052
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    ||||| ||||| |||||||||||||||||||| |||||||||||||||||||    
T  33114002 ttattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 33114052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 355 - 394
Target Start/End: Complemental strand, 36864878 - 36864839
Alignment:
Q  355 gtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    ||||||||||||||||| ||||||||||||||||||||||    
T  36864878 gtcattcttgaatcttttttgataaaatcattcttgatat 36864839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 343 - 394
Target Start/End: Complemental strand, 2754780 - 2754729
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    ||||||||||| ||||||||| ||  ||||||||||||||| ||||||||||    
T  2754780 ttattctgccatgtcattcttaaaattttcttgataaaatctttcttgatat 2754729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 343 - 394
Target Start/End: Complemental strand, 3137271 - 3137221
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    ||||| ||||| ||||||||||||| |||||| |||||||||||||||||||    
T  3137271 ttattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatat 3137221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 355 - 394
Target Start/End: Original strand, 3456284 - 3456322
Alignment:
Q  355 gtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  3456284 gtcattcttgaatctttctt-ataaaatcattcttgatat 3456322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 343 - 394
Target Start/End: Original strand, 3574529 - 3574580
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    ||||||||||| ||||||||| ||  ||||||||||||||| ||||||||||    
T  3574529 ttattctgccatgtcattcttaaaattttcttgataaaatctttcttgatat 3574580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 343 - 394
Target Start/End: Complemental strand, 6041947 - 6041896
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    |||||||| || ||||||||||||  ||||||||||||||| ||||||||||    
T  6041947 ttattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatat 6041896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 343 - 394
Target Start/End: Original strand, 6042085 - 6042135
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    ||||| ||||| |||||||||| ||||||||| |||||||||||||||||||    
T  6042085 ttattgtgccatgtcattcttggatctttctt-ataaaatcattcttgatat 6042135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 343 - 394
Target Start/End: Complemental strand, 8320439 - 8320389
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    ||||| ||||| |||||||||||||||||||| ||||||||||| |||||||    
T  8320439 ttattgtgccatgtcattcttgaatctttctt-ataaaatcattattgatat 8320389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 355 - 394
Target Start/End: Complemental strand, 9796874 - 9796836
Alignment:
Q  355 gtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    ||||||||||||||||||||||| ||||||||||||||||    
T  9796874 gtcattcttgaatctttcttgat-aaatcattcttgatat 9796836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 343 - 394
Target Start/End: Complemental strand, 11347331 - 11347280
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    ||||||||||| ||||||||| ||  ||||||||||||||| ||||||||||    
T  11347331 ttattctgccatgtcattcttaaaattttcttgataaaatctttcttgatat 11347280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 343 - 394
Target Start/End: Original strand, 26612954 - 26613005
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    ||||| ||||| || ||||||||||||||||| ||||||||||| |||||||    
T  26612954 ttattgtgccatgttattcttgaatctttcttaataaaatcattattgatat 26613005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 355 - 394
Target Start/End: Original strand, 33145932 - 33145970
Alignment:
Q  355 gtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  33145932 gtcattcttgaatctttctt-ataaaatcattcttgatat 33145970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 343 - 394
Target Start/End: Complemental strand, 34482745 - 34482695
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    ||||| ||||| ||||||||||||| |||||| |||||||||||||||||||    
T  34482745 ttattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatat 34482695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 355 - 394
Target Start/End: Complemental strand, 37216898 - 37216860
Alignment:
Q  355 gtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  37216898 gtcattcttgaatctttctt-ataaaatcattcttgatat 37216860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 343 - 394
Target Start/End: Original strand, 37217055 - 37217106
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    ||||||||||| ||||||||| ||  ||||||||||||||| ||||||||||    
T  37217055 ttattctgccatgtcattcttaaaattttcttgataaaatctttcttgatat 37217106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 343 - 394
Target Start/End: Original strand, 41224442 - 41224492
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    ||||| ||||| ||||||||||||| ||||||||| ||||||||||||||||    
T  41224442 ttattgtgccatgtcattcttgaatatttcttgat-aaatcattcttgatat 41224492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 343 - 393
Target Start/End: Complemental strand, 30385074 - 30385024
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgata 393  Q
    ||||||||||| |||||| |||||  ||||||||||||||| |||||||||    
T  30385074 ttattctgccatgtcatttttgaaattttcttgataaaatctttcttgata 30385024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 349 - 394
Target Start/End: Original strand, 42921339 - 42921384
Alignment:
Q  349 tgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    ||||| ||||||||| ||| ||||||||||||||||||||| ||||    
T  42921339 tgccatgtcattcttaaatatttcttgataaaatcattcttaatat 42921384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 355 - 391
Target Start/End: Complemental strand, 41883067 - 41883031
Alignment:
Q  355 gtcattcttgaatctttcttgataaaatcattcttga 391  Q
    |||||||||||||||||||| ||||||||||| ||||    
T  41883067 gtcattcttgaatctttcttcataaaatcatttttga 41883031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 44; Significance: 6e-16; HSPs: 22)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 343 - 394
Target Start/End: Complemental strand, 44690879 - 44690828
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    ||||||||||| |||||||||||||||||||||||||||||||| |||||||    
T  44690879 ttattctgccatgtcattcttgaatctttcttgataaaatcattattgatat 44690828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 344 - 394
Target Start/End: Complemental strand, 52064434 - 52064384
Alignment:
Q  344 tattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    ||||||| || |||||||||||||||||||||||||||||||| |||||||    
T  52064434 tattctgtcatgtcattcttgaatctttcttgataaaatcatttttgatat 52064384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 358 - 394
Target Start/End: Complemental strand, 27523098 - 27523062
Alignment:
Q  358 attcttgaatctttcttgataaaatcattcttgatat 394  Q
    |||||||||||||||||||||||||||||||||||||    
T  27523098 attcttgaatctttcttgataaaatcattcttgatat 27523062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 343 - 394
Target Start/End: Original strand, 16045800 - 16045851
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    ||||||||||| ||||||||||||  ||||||||||||||| ||||||||||    
T  16045800 ttattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 16045851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 343 - 394
Target Start/End: Complemental strand, 20304987 - 20304937
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    ||||| ||||| |||||||||||||||||||| |||||||||||||||||||    
T  20304987 ttattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 20304937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 343 - 394
Target Start/End: Complemental strand, 32000123 - 32000073
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    ||||| ||||| ||||||||||||||||||||||| ||||||||||||||||    
T  32000123 ttattgtgccatgtcattcttgaatctttcttgat-aaatcattcttgatat 32000073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 343 - 394
Target Start/End: Complemental strand, 33786488 - 33786438
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    ||||| ||||| ||||||||||||||||||||||| ||||||||||||||||    
T  33786488 ttattgtgccatgtcattcttgaatctttcttgat-aaatcattcttgatat 33786438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 343 - 394
Target Start/End: Original strand, 33786637 - 33786687
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    ||||| ||||| ||||||||||||||||||||||| ||||||||||||||||    
T  33786637 ttattgtgccatgtcattcttgaatctttcttgat-aaatcattcttgatat 33786687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 343 - 394
Target Start/End: Complemental strand, 40215051 - 40215000
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    ||||||||||| ||||||||||||  ||||||||||||||| ||||||||||    
T  40215051 ttattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 40215000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 343 - 394
Target Start/End: Original strand, 40215196 - 40215246
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    ||||| ||||| |||||||||||||||||||| |||||||||||||||||||    
T  40215196 ttattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 40215246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 343 - 394
Target Start/End: Complemental strand, 9910148 - 9910098
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    ||||| ||||| ||||||||||||| |||||| |||||||||||||||||||    
T  9910148 ttattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatat 9910098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 343 - 394
Target Start/End: Original strand, 9910295 - 9910346
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    ||||||||||| ||||||||||||  |||||||| |||||| ||||||||||    
T  9910295 ttattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatat 9910346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 343 - 394
Target Start/End: Original strand, 18404656 - 18404706
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    ||||| ||||| ||||||||| |||||||||| |||||||||||||||||||    
T  18404656 ttattgtgccatgtcattcttaaatctttctt-ataaaatcattcttgatat 18404706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 343 - 394
Target Start/End: Original strand, 19015612 - 19015662
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    ||||| ||||| ||||||||||||| |||||| |||||||||||||||||||    
T  19015612 ttattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatat 19015662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 355 - 394
Target Start/End: Complemental strand, 19722944 - 19722906
Alignment:
Q  355 gtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  19722944 gtcattcttgaatctttctt-ataaaatcattcttgatat 19722906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 343 - 394
Target Start/End: Original strand, 25463884 - 25463934
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    ||||| ||||| |||||||||| ||||||||| |||||||||||||||||||    
T  25463884 ttattgtgccatgtcattcttggatctttctt-ataaaatcattcttgatat 25463934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 343 - 394
Target Start/End: Original strand, 32000269 - 32000320
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    |||||||| || ||||||||||||| |||||||| |||||| ||||||||||    
T  32000269 ttattctgtcatgtcattcttgaatttttcttgagaaaatctttcttgatat 32000320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 343 - 394
Target Start/End: Original strand, 40273916 - 40273966
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    ||||| ||||| ||||||||||||| ||||||||| ||||||||||||||||    
T  40273916 ttattgtgccatgtcattcttgaatatttcttgat-aaatcattcttgatat 40273966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 343 - 394
Target Start/End: Complemental strand, 44094761 - 44094710
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    ||||||||||| ||||||||||||  ||||||||||||||  ||||||||||    
T  44094761 ttattctgccatgtcattcttgaaattttcttgataaaatatttcttgatat 44094710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 343 - 394
Target Start/End: Original strand, 44691031 - 44691082
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    ||||||||||| || |||||||||||||| || |||||||| ||||||||||    
T  44691031 ttattctgccatgtaattcttgaatctttttttataaaatctttcttgatat 44691082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 343 - 394
Target Start/End: Original strand, 51737713 - 51737763
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    ||||| ||||| ||||||||||||| |||||| |||||||||||||||||||    
T  51737713 ttattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatat 51737763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 344 - 394
Target Start/End: Original strand, 6883696 - 6883745
Alignment:
Q  344 tattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    |||| ||||| ||||||||||||| |||||| |||||||||||||||||||    
T  6883696 tattatgccatgtcattcttgaatttttctt-ataaaatcattcttgatat 6883745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 19)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 343 - 394
Target Start/End: Original strand, 14941368 - 14941419
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    ||||||||||| |||||||||||||||||||| |||||||| ||||||||||    
T  14941368 ttattctgccatgtcattcttgaatctttcttaataaaatctttcttgatat 14941419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 355 - 394
Target Start/End: Original strand, 22592932 - 22592971
Alignment:
Q  355 gtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  22592932 gtcattcttgaatctttcttgataaaatcattcttgatat 22592971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 343 - 394
Target Start/End: Original strand, 9293578 - 9293629
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    ||||||||||| ||||||||||||  ||||||||||||||| ||||||||||    
T  9293578 ttattctgccatgtcattcttgaaaatttcttgataaaatctttcttgatat 9293629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 342 - 394
Target Start/End: Complemental strand, 31174693 - 31174642
Alignment:
Q  342 tttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    |||||| || || |||||||||||||||||||| |||||||||||||||||||    
T  31174693 tttattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatat 31174642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 355 - 394
Target Start/End: Complemental strand, 9293420 - 9293382
Alignment:
Q  355 gtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  9293420 gtcattcttgaatctttctt-ataaaatcattcttgatat 9293382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 343 - 394
Target Start/End: Original strand, 9723614 - 9723665
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    |||||||| || ||||||||| ||| ||||||||| ||||||||||||||||    
T  9723614 ttattctgtcatgtcattcttaaatatttcttgatcaaatcattcttgatat 9723665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 343 - 394
Target Start/End: Complemental strand, 10661950 - 10661899
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    ||||||||||| ||||||||| ||  ||||||||||||||| ||||||||||    
T  10661950 ttattctgccatgtcattcttaaaattttcttgataaaatctttcttgatat 10661899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 343 - 394
Target Start/End: Complemental strand, 13354909 - 13354858
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    |||||||||||  |||||||||||  ||||||||||||||| ||||||||||    
T  13354909 ttattctgccatatcattcttgaaattttcttgataaaatctttcttgatat 13354858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 343 - 394
Target Start/End: Original strand, 13355056 - 13355106
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    ||||| ||||| |||||||||| ||||||||| |||||||||||||||||||    
T  13355056 ttattgtgccatgtcattcttggatctttctt-ataaaatcattcttgatat 13355106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 343 - 394
Target Start/End: Complemental strand, 21936144 - 21936093
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    |||||||||||  |||||||||||  ||||||||||||||| ||||||||||    
T  21936144 ttattctgccatatcattcttgaaattttcttgataaaatctttcttgatat 21936093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 343 - 394
Target Start/End: Original strand, 23268064 - 23268115
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    ||||||||||| ||||||||||||  |||||||| |||||| ||||||||||    
T  23268064 ttattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatat 23268115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 343 - 394
Target Start/End: Complemental strand, 27847695 - 27847644
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    |||||||| || |||||||||||||||||||| |||||||| ||||| ||||    
T  27847695 ttattctgtcatgtcattcttgaatctttcttaataaaatctttctttatat 27847644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 343 - 394
Target Start/End: Original strand, 31174836 - 31174887
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    ||||||||||| ||||||||||||  |||||| |||||||| ||||||||||    
T  31174836 ttattctgccatgtcattcttgaaattttcttaataaaatctttcttgatat 31174887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 343 - 394
Target Start/End: Original strand, 33380415 - 33380465
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    ||||| ||||| ||||||||||||| |||||| |||||||||||||||||||    
T  33380415 ttattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatat 33380465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 343 - 394
Target Start/End: Complemental strand, 35160820 - 35160769
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    ||||||||||| ||||||||| ||  ||||||||||||||| ||||||||||    
T  35160820 ttattctgccatgtcattcttaaaattttcttgataaaatctttcttgatat 35160769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 343 - 394
Target Start/End: Original strand, 35160967 - 35161017
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    ||||| ||||| ||||||||||||| |||||| |||||||||||||||||||    
T  35160967 ttattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatat 35161017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 343 - 394
Target Start/End: Complemental strand, 43330975 - 43330924
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    ||||||||||| ||||||||||||| ||| |||| |||||| ||||||||||    
T  43330975 ttattctgccatgtcattcttgaattttttttgagaaaatctttcttgatat 43330924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 355 - 394
Target Start/End: Original strand, 43331132 - 43331170
Alignment:
Q  355 gtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    ||||||||||||||||||||||| ||||||||||||||||    
T  43331132 gtcattcttgaatctttcttgat-aaatcattcttgatat 43331170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 343 - 395
Target Start/End: Complemental strand, 22591545 - 22591493
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatatt 395  Q
    |||||||||||  |||||||||||| ||| || |||||||| |||||||||||    
T  22591545 ttattctgccatatcattcttgaattttttttaataaaatctttcttgatatt 22591493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 36; Significance: 0.00000000004; HSPs: 5)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 343 - 394
Target Start/End: Complemental strand, 8465 - 8414
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    ||||||||||| ||||||||||||  ||||||||||||||| ||||||||||    
T  8465 ttattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 8414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 343 - 394
Target Start/End: Complemental strand, 16047 - 15996
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    ||||||||||| ||||||||||||  ||||||||||||||| ||||||||||    
T  16047 ttattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 15996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 343 - 394
Target Start/End: Complemental strand, 25999 - 25948
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    ||||||||||| ||||||||||||  ||||||||||||||| ||||||||||    
T  25999 ttattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 25948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #4
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 343 - 394
Target Start/End: Original strand, 16192 - 16242
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    ||||| ||||| ||||||||||||| |||||| |||||||||||||||||||    
T  16192 ttattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatat 16242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #5
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 343 - 394
Target Start/End: Original strand, 26144 - 26194
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    ||||| ||||| ||||||||||||| |||||| |||||||||||||||||||    
T  26144 ttattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatat 26194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 36; Significance: 0.00000000004; HSPs: 19)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 343 - 394
Target Start/End: Original strand, 4974737 - 4974788
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    ||||||||||| ||||||||||||  ||||||||||||||| ||||||||||    
T  4974737 ttattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 4974788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 343 - 394
Target Start/End: Original strand, 15577852 - 15577903
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    ||||||||||| ||||||||||||  ||||||||||||||| ||||||||||    
T  15577852 ttattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 15577903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 343 - 394
Target Start/End: Original strand, 34483046 - 34483096
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    ||||| ||||| |||||||||||||||||||| |||||||||||||||||||    
T  34483046 ttattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 34483096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 343 - 394
Target Start/End: Complemental strand, 42611874 - 42611823
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    ||||||||||| ||||||||||||  ||||||||||||||| ||||||||||    
T  42611874 ttattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 42611823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 343 - 394
Target Start/End: Complemental strand, 45637775 - 45637724
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    ||||||||||| ||||||||||||  ||||||||||||||| ||||||||||    
T  45637775 ttattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 45637724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 358 - 394
Target Start/End: Original strand, 29737367 - 29737403
Alignment:
Q  358 attcttgaatctttcttgataaaatcattcttgatat 394  Q
    |||||| ||||||||||||||||||||||||||||||    
T  29737367 attcttaaatctttcttgataaaatcattcttgatat 29737403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 343 - 394
Target Start/End: Complemental strand, 4974592 - 4974542
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    ||||| ||||| ||||||||||||||||| || |||||||||||||||||||    
T  4974592 ttattgtgccatgtcattcttgaatcttt-tttataaaatcattcttgatat 4974542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 343 - 394
Target Start/End: Complemental strand, 15329336 - 15329285
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    |||||||| || ||||||||||||  ||||||||||||||| ||||||||||    
T  15329336 ttattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatat 15329285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 343 - 394
Target Start/End: Complemental strand, 18037041 - 18036990
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    ||||||||||| ||||||||| ||| |||||||| |||||| ||||||||||    
T  18037041 ttattctgccatgtcattcttaaatttttcttgaaaaaatctttcttgatat 18036990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 355 - 394
Target Start/End: Complemental strand, 20009944 - 20009905
Alignment:
Q  355 gtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    ||||||||||||||||| ||||||||||||||| ||||||    
T  20009944 gtcattcttgaatcttttttgataaaatcattcatgatat 20009905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 343 - 394
Target Start/End: Complemental strand, 24395035 - 24394984
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    ||||||||||| ||||||||| ||  ||||||||||||||| ||||||||||    
T  24395035 ttattctgccatgtcattcttaaaattttcttgataaaatctttcttgatat 24394984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 343 - 394
Target Start/End: Original strand, 24395179 - 24395229
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    ||||| ||||| ||||||||||||||||| || |||||||||||||||||||    
T  24395179 ttattgtgccatgtcattcttgaatcttt-tttataaaatcattcttgatat 24395229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 343 - 394
Target Start/End: Complemental strand, 25167713 - 25167663
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    ||||| ||||| ||||||||||||| |||||| |||||||||||||||||||    
T  25167713 ttattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatat 25167663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 343 - 394
Target Start/End: Original strand, 36790468 - 36790519
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    ||||||||||| ||||||||| ||| ||||||||||||| | ||||||||||    
T  36790468 ttattctgccatgtcattcttaaatttttcttgataaaaactttcttgatat 36790519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 343 - 394
Target Start/End: Original strand, 37477082 - 37477133
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    ||||||||||| ||||||||| ||| |||||||| |||||| ||||||||||    
T  37477082 ttattctgccatgtcattcttaaatttttcttgagaaaatctttcttgatat 37477133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 343 - 394
Target Start/End: Original strand, 45637919 - 45637969
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    ||||| ||||| |||||||||||||||||||| |||||||||||||| ||||    
T  45637919 ttattgtgccatgtcattcttgaatctttctt-ataaaatcattcttaatat 45637969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 343 - 394
Target Start/End: Complemental strand, 48880784 - 48880734
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    ||||| ||||| ||||||||||||| |||||| |||||||||||||||||||    
T  48880784 ttattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatat 48880734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 343 - 394
Target Start/End: Original strand, 48880929 - 48880980
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    |||||||| || ||||||||||||  ||||||||||||||| ||||||||||    
T  48880929 ttattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatat 48880980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 355 - 395
Target Start/End: Complemental strand, 36790322 - 36790282
Alignment:
Q  355 gtcattcttgaatctttcttgataaaatcattcttgatatt 395  Q
    ||||||||||||||||| ||||||||| |||| ||||||||    
T  36790322 gtcattcttgaatctttgttgataaaaccattattgatatt 36790282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 36; Significance: 0.00000000004; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 343 - 394
Target Start/End: Complemental strand, 8145438 - 8145387
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    ||||||||||| ||||||||||||  ||||||||||||||| ||||||||||    
T  8145438 ttattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 8145387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 343 - 394
Target Start/End: Original strand, 8145581 - 8145631
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    ||||| ||||| |||||||||||||||||||| |||||||||||||||||||    
T  8145581 ttattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 8145631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 343 - 394
Target Start/End: Complemental strand, 22912914 - 22912864
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    ||||| ||||| ||||||||||||||||||||||| ||||||||||||||||    
T  22912914 ttattgtgccatgtcattcttgaatctttcttgat-aaatcattcttgatat 22912864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 343 - 394
Target Start/End: Original strand, 22913056 - 22913107
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    ||||||||||| ||||||||||||| |||||||| |||||| ||||||||||    
T  22913056 ttattctgccatgtcattcttgaatttttcttgaaaaaatctttcttgatat 22913107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 343 - 395
Target Start/End: Complemental strand, 10458460 - 10458408
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatatt 395  Q
    ||||| ||||| ||||||||||||| ||||||||||||||  |||||||||||    
T  10458460 ttattttgccatgtcattcttgaatttttcttgataaaatttttcttgatatt 10458408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 343 - 394
Target Start/End: Complemental strand, 2477699 - 2477648
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    ||||||||||| ||||||||| ||  ||||||||||||||| ||||||||||    
T  2477699 ttattctgccatgtcattcttaaaattttcttgataaaatctttcttgatat 2477648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 343 - 394
Target Start/End: Complemental strand, 3362841 - 3362790
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    ||||||||||| |||||||||| |  ||||||||||||||| ||||||||||    
T  3362841 ttattctgccatgtcattcttggaattttcttgataaaatctttcttgatat 3362790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 343 - 394
Target Start/End: Original strand, 4892410 - 4892460
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    ||||| ||||| ||||||||||||| |||||| |||||||||||||||||||    
T  4892410 ttattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatat 4892460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 343 - 394
Target Start/End: Original strand, 6043513 - 6043564
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    ||||||| ||| ||||||||||||  ||||||||||||||| ||||||||||    
T  6043513 ttattcttccatgtcattcttgaaattttcttgataaaatctttcttgatat 6043564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 343 - 394
Target Start/End: Original strand, 11361133 - 11361184
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    ||||||||||| ||||||||| ||  ||||||||||||||| ||||||||||    
T  11361133 ttattctgccatgtcattcttaaaattttcttgataaaatctttcttgatat 11361184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 343 - 394
Target Start/End: Complemental strand, 12614595 - 12614544
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    ||||| ||||| ||||||||| ||||||| ||||||||||||| ||||||||    
T  12614595 ttattgtgccatgtcattcttaaatcttttttgataaaatcatacttgatat 12614544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 355 - 394
Target Start/End: Original strand, 12614747 - 12614786
Alignment:
Q  355 gtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    ||||||||||||||||||||||||||||  ||||||||||    
T  12614747 gtcattcttgaatctttcttgataaaatatttcttgatat 12614786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 343 - 394
Target Start/End: Original strand, 12851010 - 12851060
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    ||||| ||||| ||||||||||||| |||||| |||||||||||||||||||    
T  12851010 ttattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatat 12851060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 343 - 394
Target Start/End: Complemental strand, 14138731 - 14138680
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    ||||||||||| || |||||||||  ||||||||||||||| ||||||||||    
T  14138731 ttattctgccatgtaattcttgaaattttcttgataaaatctttcttgatat 14138680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 343 - 394
Target Start/End: Original strand, 14138875 - 14138925
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    ||||| ||||| |||||||||||||||||||| |||||||||||||| ||||    
T  14138875 ttattgtgccatgtcattcttgaatctttctt-ataaaatcattcttaatat 14138925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 343 - 378
Target Start/End: Complemental strand, 31640798 - 31640763
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgata 378  Q
    ||||||||||| ||||||||||||||||||||||||    
T  31640798 ttattctgccatgtcattcttgaatctttcttgata 31640763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 343 - 378
Target Start/End: Original strand, 31640942 - 31640977
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgata 378  Q
    ||||||||||| ||||||||||||||||||||||||    
T  31640942 ttattctgccatgtcattcttgaatctttcttgata 31640977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 343 - 394
Target Start/End: Complemental strand, 33584186 - 33584136
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    ||||| ||||| ||||||||||||| |||||| |||||||||||||||||||    
T  33584186 ttattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatat 33584136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 343 - 394
Target Start/End: Complemental strand, 38899583 - 38899532
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    ||||| ||||| ||||||||||||| ||| || |||||||||||||||||||    
T  38899583 ttattgtgccatgtcattcttgaatttttttttataaaatcattcttgatat 38899532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 343 - 394
Target Start/End: Original strand, 38899728 - 38899779
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    ||||||||||| |||||||||| |  ||||||||||||||| ||||||||||    
T  38899728 ttattctgccatgtcattcttggaattttcttgataaaatctttcttgatat 38899779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 355 - 389
Target Start/End: Original strand, 27482043 - 27482077
Alignment:
Q  355 gtcattcttgaatctttcttgataaaatcattctt 389  Q
    ||||||||||||||||| |||||||||||||||||    
T  27482043 gtcattcttgaatcttttttgataaaatcattctt 27482077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 343 - 393
Target Start/End: Complemental strand, 47913 - 47863
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgata 393  Q
    ||||||||||| ||||||||||||  ||||||||||||||| |||||||||    
T  47913 ttattctgccatgtcattcttgaaattttcttgataaaatctttcttgata 47863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 355 - 394
Target Start/End: Original strand, 48069 - 48107
Alignment:
Q  355 gtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  48069 gtcattcttgaatctttctt-ataaaatcattcttgatat 48107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 343 - 394
Target Start/End: Complemental strand, 12905 - 12854
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    ||||||||||| ||||||||||||  |||||||| |||||| ||||||||||    
T  12905 ttattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatat 12854  T

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Target: scaffold0178 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 343 - 394
Target Start/End: Complemental strand, 11684 - 11633
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    |||||||| || ||||||||||||  ||||||||||||||| ||||||||||    
T  11684 ttattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatat 11633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 343 - 394
Target Start/End: Complemental strand, 41074 - 41023
Alignment:
Q  343 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 394  Q
    ||||||||||| ||||||||||||  ||| ||||||||||| ||||||||||    
T  41074 ttattctgccatgtcattcttgaaatttttttgataaaatctttcttgatat 41023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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