View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16024_low_1 (Length: 804)

Name: NF16024_low_1
Description: NF16024
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16024_low_1
NF16024_low_1
[»] chr7 (23 HSPs)
chr7 (12-674)||(3934158-3934819)
chr7 (12-649)||(42678867-42679503)
chr7 (219-655)||(19788328-19788764)
chr7 (12-197)||(8414809-8414994)
chr7 (26-226)||(16497171-16497370)
chr7 (319-729)||(21767436-21767845)
chr7 (462-581)||(8731886-8732005)
chr7 (253-356)||(16533496-16533599)
chr7 (253-356)||(16632063-16632166)
chr7 (12-85)||(3932507-3932580)
chr7 (12-89)||(16535279-16535356)
chr7 (12-89)||(16630306-16630383)
chr7 (12-89)||(36464542-36464619)
chr7 (12-84)||(3051993-3052065)
chr7 (12-89)||(3932533-3932610)
chr7 (12-89)||(3934772-3934849)
chr7 (12-89)||(16497097-16497174)
chr7 (12-85)||(8733783-8733856)
chr7 (12-89)||(16497127-16497204)
chr7 (12-86)||(16535309-16535383)
chr7 (12-86)||(16630279-16630353)
chr7 (52-90)||(19786590-19786628)
chr7 (52-90)||(19788896-19788934)
[»] chr4 (14 HSPs)
chr4 (26-688)||(42468742-42469403)
chr4 (12-189)||(45166759-45166936)
chr4 (627-759)||(33246227-33246359)
chr4 (462-581)||(13775805-13775924)
chr4 (12-85)||(45161971-45162044)
chr4 (209-284)||(8738981-8739056)
chr4 (12-89)||(45161997-45162074)
chr4 (12-89)||(45166889-45166966)
chr4 (26-86)||(42471071-42471131)
chr4 (54-90)||(50856062-50856098)
chr4 (12-91)||(43179441-43179520)
chr4 (42-90)||(8739239-8739287)
chr4 (82-122)||(13776225-13776265)
chr4 (353-487)||(45163933-45164067)
[»] chr8 (11 HSPs)
chr8 (26-674)||(4878554-4879201)
chr8 (187-586)||(36377740-36378130)
chr8 (12-122)||(36377501-36377621)
chr8 (12-89)||(21268448-21268525)
chr8 (12-90)||(36379786-36379864)
chr8 (12-85)||(21268478-21268551)
chr8 (26-85)||(4876814-4876873)
chr8 (26-85)||(24519457-24519516)
chr8 (12-79)||(21268418-21268485)
chr8 (12-78)||(36377471-36377537)
chr8 (12-78)||(36379756-36379822)
[»] chr5 (12 HSPs)
chr5 (12-315)||(1779778-1780084)
chr5 (187-586)||(11850465-11850854)
chr5 (12-89)||(37207660-37207737)
chr5 (12-90)||(22600699-22600777)
chr5 (12-90)||(23164559-23164637)
chr5 (12-122)||(11850226-11850346)
chr5 (12-90)||(11852484-11852562)
chr5 (12-85)||(37207634-37207707)
chr5 (35-80)||(1779741-1779786)
chr5 (12-80)||(1779748-1779816)
chr5 (12-78)||(23164529-23164595)
chr5 (12-81)||(1779514-1779583)
[»] chr1 (9 HSPs)
chr1 (12-189)||(2404146-2404323)
chr1 (12-132)||(29833394-29833514)
chr1 (462-729)||(4820302-4820564)
chr1 (462-729)||(4832102-4832364)
chr1 (462-581)||(10910706-10910825)
chr1 (12-90)||(734897-734975)
chr1 (182-264)||(29833618-29833700)
chr1 (370-487)||(2408224-2408341)
chr1 (12-79)||(29833364-29833431)
[»] scaffold0050 (3 HSPs)
scaffold0050 (182-688)||(30780-31281)
scaffold0050 (12-90)||(29121-29199)
scaffold0050 (12-89)||(31440-31517)
[»] chr2 (13 HSPs)
chr2 (13-175)||(34576903-34577065)
chr2 (187-586)||(31488404-31488793)
chr2 (491-649)||(39816817-39816975)
chr2 (27-90)||(15729870-15729933)
chr2 (12-90)||(31488954-31489032)
chr2 (462-580)||(42276248-42276366)
chr2 (12-90)||(31486670-31486748)
chr2 (12-78)||(29801773-29801840)
chr2 (12-48)||(34576932-34576968)
chr2 (325-417)||(39816669-39816761)
chr2 (52-90)||(5164285-5164323)
chr2 (12-77)||(29801805-29801870)
chr2 (12-87)||(23859767-23859846)
[»] chr3 (5 HSPs)
chr3 (64-189)||(8535305-8535430)
chr3 (462-581)||(4532490-4532609)
chr3 (12-85)||(18966443-18966518)
chr3 (12-85)||(39578235-39578308)
chr3 (82-122)||(4532910-4532950)
[»] chr6 (2 HSPs)
chr6 (628-759)||(20643158-20643289)
chr6 (54-90)||(21199136-21199172)
[»] scaffold1361 (1 HSPs)
scaffold1361 (462-581)||(1534-1653)
[»] scaffold0008 (3 HSPs)
scaffold0008 (12-85)||(73069-73142)
scaffold0008 (31-89)||(73095-73153)
scaffold0008 (353-487)||(90100-90234)


Alignment Details
Target: chr7 (Bit Score: 339; Significance: 0; HSPs: 23)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 339; E-Value: 0
Query Start/End: Original strand, 12 - 674
Target Start/End: Complemental strand, 3934819 - 3934158
Alignment:
Q  12 attattctttagtgttctagagacttccacattattcgttattattctagagacttccatattattcttcatcattctccccgggttggagaagactcgt 111  Q
    ||||||||||||| ||||||||||||||| ||||||| | || ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  3934819 attattctttagtcttctagagacttccatattattcttcatcattctagagacttccatattattcttcatcattctccccgggttggataagactcgt 3934720  T
Q  112 cctcgagtcaaaagtcttctttatcgccaaagtatggtgaaagatcagcaacattgaaggtagcagagactccatagtaatccaagggaaaaattcatac 211  Q
    ||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||| |||||    
T  3934719 cctcgagtcgaaagtcttcttcatcgccaaagtatggtgaaagatcagcaacattgaaagtagcagagacaccatagtaatccaa-ggaaaaatccatac 3934621  T
Q  212 taataacttcccaaggtggcttaggaattggacggaacatacataactttgttgtatccctcaattgttccttgatgactaaaagttctagtgaattgca 311  Q
    ||| ||||||||||||||||||||||||||||||| ||||| ||||||||||||| ||| ||||| |||||||  |||||| |||||||||| | ||| |    
T  3934620 taacaacttcccaaggtggcttaggaattggacgggacatatataactttgttgtttccttcaatggttcctttgtgactagaagttctagtaacttgaa 3934521  T
Q  312 ttcatcttttccttcattgaattcattgagtggtagacgtgccaacttgatgttaatcccatctttcacaaaagtgtagatgttggcataaccatcatat 411  Q
    ||| |||||||||||| |||||||||| ||||||||||||||||||||||| ||||| |||| |||||||||||||| ||||||||||||||||||||||    
T  3934520 ttcctcttttccttcaatgaattcattaagtggtagacgtgccaacttgattttaataccatatttcacaaaagtgttgatgttggcataaccatcatat 3934421  T
Q  412 aatgcatgatgatcatatttccaaggcctcttaagaaaaaggtggcaaacatccataggaataacatcacgccataacctttctttataattttttctaa 511  Q
    |||||| || ||||||||| ||| ||| ||  ||||  |  |||||||  |||||| ||||||| ||||| |||||   ||||||||||||| ||   ||    
T  3934420 aatgcacgacgatcatattgccatggcatcccaagatgagtgtggcaagtatccattggaataatatcacaccatacattttctttataattcttgtcaa 3934321  T
Q  512 tggaaaatgaagcaatgttgtgttgagatactcttacctcactatccttgttgagccattgtagcttgtatggatcttgatgctcaatcatttgggactt 611  Q
    ||||||||||   ||||  ||||||||||||| |||||||  ||||||||||||||||||| ||||||||||||||||| || | ||||||| || ||||    
T  3934320 tggaaaatgagataatggagtgttgagatacttttacctcgttatccttgttgagccattgcagcttgtatggatcttggtgattaatcattcggaactt 3934221  T
Q  612 taacttttttgctatgtagtttgatggaacgttttcacatcttctgatattgatgatgtcatt 674  Q
    ||||| || | |||| |||||||||| ||| |||||||  ||| || ||| ||||||| ||||    
T  3934220 taactcttcttctatatagtttgatgcaacattttcaccacttttgttatcgatgatgacatt 3934158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 334; E-Value: 0
Query Start/End: Original strand, 12 - 649
Target Start/End: Original strand, 42678867 - 42679503
Alignment:
Q  12 attattctttagtgttctagagacttccacattattcgttattattctagagacttccatattattcttcatcattctccccgggttggagaagactcgt 111  Q
    |||||||  |||| || |||||||||||| ||||||| ||| | ||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||    
T  42678867 attattccatagtattttagagacttccatattattctttagttttctagaaacttccatattattcttcatcattctccccgagttggagaagactcgt 42678966  T
Q  112 cctcgagtcaaaagtcttctttatcgccaaagtatggtgaaagatcagcaacattgaaggtagcagagactccatagtaatccaagggaaaaattcatac 211  Q
    ||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||| |||||    
T  42678967 cctcgagtcgaaagtcttcttcatcgccaaagtatggtgaaagatcagcaacattgaaagtagcagagactccatagtaatccaagg-aaaaatccatac 42679065  T
Q  212 taataacttcccaaggtggcttaggaattggacggaacatacataactttgttgtatccctcaattgttccttgatgactaaaagttctagtgaattgca 311  Q
    ||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| |||||||  |||||| ||||| |||||| ||| |    
T  42679066 taacaacttcccaaggtggcttaggaattggacggaacatatataactttgttgtatccttcaatggttcctttgtgactagaagttatagtgacttgaa 42679165  T
Q  312 ttcatcttttccttcattgaattcattgagtggtagacgtgccaacttgatgttaatcccatctttcacaaaagtgtagatgttggcataaccatcatat 411  Q
    ||| |||||||||||| |||||||||||||||||| ||||| ||||||||| ||||| |||| |||||||||||||| |||||||| |||||||||||||    
T  42679166 ttcctcttttccttcaatgaattcattgagtggtaaacgtgtcaacttgattttaataccatatttcacaaaagtgttgatgttggtataaccatcatat 42679265  T
Q  412 aatgcatgatgatcatatttccaaggcctcttaagaaaaaggtggcaaacatccataggaataacatcacgccataacctttctttataattttttctaa 511  Q
    |||||| |||||||||||| ||| ||||||  ||||  |  |||||||  |||||| ||||||||||||| || ||   ||||||||||||| ||   ||    
T  42679266 aatgcacgatgatcatattgccatggcctcccaagatgagtgtggcaagtatccattggaataacatcacaccgtacattttctttataattcttgtcaa 42679365  T
Q  512 tggaaaatgaagcaatgttgtgttgagatactcttacctcactatccttgttgagccattgtagcttgtatggatcttgatgctcaatcatttgggactt 611  Q
    ||||||||||   ||||  ||||||||||||| |||||||   |||||||||||||||||| ||||||||||||||||| || | ||||||| || ||||    
T  42679366 tggaaaatgagataatggagtgttgagatacttttacctcgtaatccttgttgagccattgcagcttgtatggatcttggtgattaatcattcggaactt 42679465  T
Q  612 taacttttttgctatgtagtttgatggaacgttttcac 649  Q
    ||||| || | |||| |||||||||| |||||||||||    
T  42679466 taactcttcttctatatagtttgatgcaacgttttcac 42679503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 181; E-Value: 2e-97
Query Start/End: Original strand, 219 - 655
Target Start/End: Complemental strand, 19788764 - 19788328
Alignment:
Q  219 ttcccaaggtggcttaggaattggacggaacatacataactttgttgtatccctcaattgttccttgatgactaaaagttctagtgaattgcattcatct 318  Q
    |||||||||||||||||||| |||||| | || ||||||||||||  ||||| | ||| |||||||  ||  | ||||||||||||| |||||| |||||    
T  19788764 ttcccaaggtggcttaggaactggacgaagcagacataactttgtcttatccttgaatggttcctttgtgtgtgaaagttctagtgacttgcatccatct 19788665  T
Q  319 tttccttcattgaattcattgagtggtagacgtgccaacttgatgttaatcccatctttcacaaaagtgtagatgttggcataaccatcatataatgcat 418  Q
    |||||||||||||||| ||||||||||||||||||||||||| | |||||| || | |||||||||||||| |||||||||||||||||  |||||||||    
T  19788664 tttccttcattgaattgattgagtggtagacgtgccaacttggttttaatctcaaccttcacaaaagtgtaaatgttggcataaccatcgaataatgcat 19788565  T
Q  419 gatgatcatatttccaaggcctcttaagaaaaaggtggcaaacatccataggaataacatcacgccataacctttctttataattttttctaatggaaaa 518  Q
    || ||| ||||||||| ||||||  ||||  || |||||||  |||||| |||||||||| || ||||||  ||||||||||||||||   |||||||||    
T  19788564 gacgattatatttccatggcctcccaagatgaatgtggcaaggatccattggaataacattacaccataaattttctttataatttttgtcaatggaaaa 19788465  T
Q  519 tgaagcaatgttgtgttgagatactcttacctcactatccttgttgagccattgtagcttgtatggatcttgatgctcaatcatttgggactttaacttt 618  Q
    |||   ||||  ||||||||||||| |||||||| ||||| ||||||||||||| ||||||||||||||| | || | ||||||| || ||||||||| |    
T  19788464 tgagataatggagtgttgagatacttttacctcattatccatgttgagccattgcagcttgtatggatctgggtgattaatcattgggaactttaactct 19788365  T
Q  619 tttgctatgtagtttgatggaacgttttcacatcttc 655  Q
    | | |||| |||||||||| ||||| |||||||||||    
T  19788364 tcttctatatagtttgatgcaacgtgttcacatcttc 19788328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 146; E-Value: 2e-76
Query Start/End: Original strand, 12 - 197
Target Start/End: Original strand, 8414809 - 8414994
Alignment:
Q  12 attattctttagtgttctagagacttccacattattcgttattattctagagacttccatattattcttcatcattctccccgggttggagaagactcgt 111  Q
    ||||||||||||||||||||| |||||||||||||||  || |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  8414809 attattctttagtgttctagatacttccacattattctctagtattctagagtcttccatattattcttcatcattctccccgggttggagaagactcgt 8414908  T
Q  112 cctcgagtcaaaagtcttctttatcgccaaagtatggtgaaagatcagcaacattgaaggtagcagagactccatagtaatccaag 197  Q
    ||||||||| ||||||||||| ||| |||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||    
T  8414909 cctcgagtcgaaagtcttcttcatcaccaaagtatggtgaaatatcagcaacattgaaggtagcatagactccatagtaatccaag 8414994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 145; E-Value: 7e-76
Query Start/End: Original strand, 26 - 226
Target Start/End: Original strand, 16497171 - 16497370
Alignment:
Q  26 ttctagagacttccacattattcgttattattctagagacttccatattattcttcatcattctccccgggttggagaagactcgtcctcgagtcaaaag 125  Q
    ||||||||||||||| ||||||| | || |||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||    
T  16497171 ttctagagacttccatattattcttgatcattctagagacttccatattattcttgatcattctccccgggttggaaaagactcgtcctcgagtcaaaag 16497270  T
Q  126 tcttctttatcgccaaagtatggtgaaagatcagcaacattgaaggtagcagagactccatagtaatccaagggaaaaattcatactaataacttcccaa 225  Q
    ||||||| |||||||||||||||||||||||||||||||||||| |||  ||||||||||||||||||||| |||||||| |||||||| ||||||||||    
T  16497271 tcttcttcatcgccaaagtatggtgaaagatcagcaacattgaaagtataagagactccatagtaatccaa-ggaaaaatccatactaacaacttcccaa 16497369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 319 - 729
Target Start/End: Original strand, 21767436 - 21767845
Alignment:
Q  319 tttccttcattgaattcattgagtggtagacgtgccaacttgatgttaatcccatctttcacaaaagtgtagatgttggcataaccatcatataatgcat 418  Q
    ||||||||||||||||||| |||||||||| |||| |||||||| |||||| |||| ||||| |||| ||||||||||||||||||||| |||||||||     
T  21767436 tttccttcattgaattcatcgagtggtagaggtgcaaacttgattttaatcacatccttcacgaaagggtagatgttggcataaccatcgtataatgcac 21767535  T
Q  419 gatgatcatatttccaaggcctcttaagaaaaaggtggcaaacatccataggaataacatcacgccataacctttctttataattttttctaatggaaaa 518  Q
    ||  ||||||||  |||||||||  |||| ||| |||||||| |||| ||  |||| |||  | |||||   |||||||| |||| || | ||| | |||    
T  21767536 gacaatcatattgacaaggcctcccaagataaatgtggcaaatatccttaaaaatagcattgcaccatacattttctttacaattattgccaatag-aaa 21767634  T
Q  519 tgaagcaatgttgtgttgagatactcttacctcactatccttgttgagccattgtagcttgtatggatcttgatgctcaatcatttgggactttaacttt 618  Q
    |||| ||||   ||||||||||| | |||||| | ||||||||||||||||||| ||||||||||||||||| || | ||||  || ||||| ||| |      
T  21767635 tgaaacaatagagtgttgagataattttacctaattatccttgttgagccattgcagcttgtatggatcttggtgattaatcggtttggactataaatag 21767734  T
Q  619 tttgctatgtagtttgatggaacgttttcacatcttctgatattgatgatgtcattgcaagccatgtcttgcgaggtgcaatgagtttgaaagatatcat 718  Q
    | |||||| |||||||||| ||| |||||||||||| || ||||||  ||| |||| ||| |||||||||| |||||||||||||  || |||| ||  |    
T  21767735 tatgctatatagtttgatgcaacattttcacatcttttgttattgacaatgacattacaaaccatgtcttgtgaggtgcaatgagcgtggaagaaattgt 21767834  T
Q  719 gtcctagccat 729  Q
    |||||||||||    
T  21767835 gtcctagccat 21767845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 462 - 581
Target Start/End: Original strand, 8731886 - 8732005
Alignment:
Q  462 atccataggaataacatcacgccataacctttctttataattttttctaatggaaaatgaagcaatgttgtgttgagatactcttacctcactatccttg 561  Q
    |||||||| ||||||||||| ||||||  ||||||||||||| || | ||||||||||||   |||   ||||||||||||| |||||||| ||||||||    
T  8731886 atccatagaaataacatcacaccataaattttctttataattattgccaatggaaaatgagataatagagtgttgagatacttttacctcattatccttg 8731985  T
Q  562 ttgagccattgtagcttgta 581  Q
    ||||||||||| ||||||||    
T  8731986 ttgagccattgaagcttgta 8732005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 253 - 356
Target Start/End: Original strand, 16533496 - 16533599
Alignment:
Q  253 cataactttgttgtatccctcaattgttccttgatgactaaaagttctagtgaattgcattcatcttttccttcattgaattcattgagtggtagacgtg 352  Q
    ||||||||| |||||||| ||||| |||||||  |||||| |||||||||||| ||| |||| |||||||||||| ||||||||| |||||||||| |||    
T  16533496 cataacttttttgtatccttcaatggttcctttgtgactagaagttctagtgacttgaattcctcttttccttcaatgaattcatcgagtggtagaggtg 16533595  T
Q  353 ccaa 356  Q
    ||||    
T  16533596 ccaa 16533599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 253 - 356
Target Start/End: Complemental strand, 16632166 - 16632063
Alignment:
Q  253 cataactttgttgtatccctcaattgttccttgatgactaaaagttctagtgaattgcattcatcttttccttcattgaattcattgagtggtagacgtg 352  Q
    ||||||||| |||||||| ||||| |||||||  |||||| |||||||||||| ||| |||| |||||||||||| ||||||||| |||||||||| |||    
T  16632166 cataacttttttgtatccttcaatggttcctttgtgactagaagttctagtgacttgaattcctcttttccttcaatgaattcatcgagtggtagaggtg 16632067  T
Q  353 ccaa 356  Q
    ||||    
T  16632066 ccaa 16632063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 12 - 85
Target Start/End: Complemental strand, 3932580 - 3932507
Alignment:
Q  12 attattctttagtgttctagagacttccacattattcgttattattctagagacttccatattattcttcatca 85  Q
    ||||||||||||| ||||||||||||||| ||||||| | || |||||||||||||||||||||||||||||||    
T  3932580 attattctttagtcttctagagacttccatattattcttcatcattctagagacttccatattattcttcatca 3932507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 12 - 89
Target Start/End: Original strand, 16535279 - 16535356
Alignment:
Q  12 attattctttagtgttctagagacttccacattattcgttattattctagagacttccatattattcttcatcattct 89  Q
    |||||||  |||| ||||||||||||||||||||||| |||||||||||||| |||||||||||||||| ||||||||    
T  16535279 attattccatagtattctagagacttccacattattctttattattctagaggcttccatattattcttgatcattct 16535356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 12 - 89
Target Start/End: Complemental strand, 16630383 - 16630306
Alignment:
Q  12 attattctttagtgttctagagacttccacattattcgttattattctagagacttccatattattcttcatcattct 89  Q
    |||||||  |||| ||||||||||||||||||||||| |||||||||||||| |||||||||||||||| ||||||||    
T  16630383 attattccatagtattctagagacttccacattattctttattattctagaggcttccatattattcttgatcattct 16630306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 12 - 89
Target Start/End: Original strand, 36464542 - 36464619
Alignment:
Q  12 attattctttagtgttctagagacttccacattattcgttattattctagagacttccatattattcttcatcattct 89  Q
    |||||| ||||||||||||||||||||||||||||||  || |||||||||| ||||||||||||| |||||||||||    
T  36464542 attattatttagtgttctagagacttccacattattctctagtattctagagtcttccatattatttttcatcattct 36464619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 12 - 84
Target Start/End: Complemental strand, 3052065 - 3051993
Alignment:
Q  12 attattctttagtgttctagagacttccacattattcgttattattctagagacttccatattattcttcatc 84  Q
    |||||||||||||||| |||||||||| |||||||||  || |||||||||| ||||||||||||||||||||    
T  3052065 attattctttagtgttatagagacttcgacattattctctagtattctagagtcttccatattattcttcatc 3051993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 12 - 89
Target Start/End: Complemental strand, 3932610 - 3932533
Alignment:
Q  12 attattctttagtgttctagagacttccacattattcgttattattctagagacttccatattattcttcatcattct 89  Q
    |||||||  |||| |||||||| |||||| ||||||| ||| | ||||||||||||||||||||||||||||||||||    
T  3932610 attattccctagtattctagagtcttccatattattctttagtcttctagagacttccatattattcttcatcattct 3932533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 12 - 89
Target Start/End: Complemental strand, 3934849 - 3934772
Alignment:
Q  12 attattctttagtgttctagagacttccacattattcgttattattctagagacttccatattattcttcatcattct 89  Q
    |||||||  |||| |||||||| |||||| ||||||| ||| | ||||||||||||||||||||||||||||||||||    
T  3934849 attattccctagtattctagagtcttccatattattctttagtcttctagagacttccatattattcttcatcattct 3934772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 12 - 89
Target Start/End: Original strand, 16497097 - 16497174
Alignment:
Q  12 attattctttagtgttctagagacttccacattattcgttattattctagagacttccatattattcttcatcattct 89  Q
    |||||||  |||| ||||||| ||||||||||||||| |||||||||||||| | |||||||||||||| ||||||||    
T  16497097 attattccatagtattctagaaacttccacattattctttattattctagaggcatccatattattcttgatcattct 16497174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 85
Target Start/End: Original strand, 8733783 - 8733856
Alignment:
Q  12 attattctttagtgttctagagacttccacattattcgttattattctagagacttccatattattcttcatca 85  Q
    |||||||  |||| ||||||||||||| | ||||||| ||| | ||||||||||||||||||||||||||||||    
T  8733783 attattccctagtattctagagacttctatattattctttagtgttctagagacttccatattattcttcatca 8733856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 89
Target Start/End: Original strand, 16497127 - 16497204
Alignment:
Q  12 attattctttagtgttctagagacttccacattattcgttattattctagagacttccatattattcttcatcattct 89  Q
    ||||||||||| | |||||||| | |||| ||||||| | || |||||||||||||||||||||||||| ||||||||    
T  16497127 attattctttattattctagaggcatccatattattcttgatcattctagagacttccatattattcttgatcattct 16497204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 86
Target Start/End: Original strand, 16535309 - 16535383
Alignment:
Q  12 attattctttagtgttctagagacttccacattattcgttattattctagagacttccatattattcttcatcat 86  Q
    ||||||||||| | |||||||| |||||| ||||||| | || |||||| ||||||||||||||||||| |||||    
T  16535309 attattctttattattctagaggcttccatattattcttgatcattctatagacttccatattattcttgatcat 16535383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 86
Target Start/End: Complemental strand, 16630353 - 16630279
Alignment:
Q  12 attattctttagtgttctagagacttccacattattcgttattattctagagacttccatattattcttcatcat 86  Q
    ||||||||||| | |||||||| |||||| ||||||| | || |||||| ||||||||||||||||||| |||||    
T  16630353 attattctttattattctagaggcttccatattattcttgatcattctatagacttccatattattcttgatcat 16630279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 52 - 90
Target Start/End: Complemental strand, 19786628 - 19786590
Alignment:
Q  52 attattctagagacttccatattattcttcatcattctc 90  Q
    ||||||||||| ||||||||||||||||| |||||||||    
T  19786628 attattctagaaacttccatattattcttgatcattctc 19786590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 52 - 90
Target Start/End: Complemental strand, 19788934 - 19788896
Alignment:
Q  52 attattctagagacttccatattattcttcatcattctc 90  Q
    |||||||||||||||||| |||||||||| |||||||||    
T  19788934 attattctagagacttccttattattcttgatcattctc 19788896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 327; Significance: 0; HSPs: 14)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 327; E-Value: 0
Query Start/End: Original strand, 26 - 688
Target Start/End: Original strand, 42468742 - 42469403
Alignment:
Q  26 ttctagagacttccacattattcgttattattctagagacttccatattattcttcatcattctccccgggttggagaagactcgtcctcgagtcaaaag 125  Q
    |||||||| |||||| ||||||| | |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||    
T  42468742 ttctagagtcttccatattattcttcaccattctagagacttccatattattcttcatcattctccccgggttggagaagactcgttctcgagtcgaaag 42468841  T
Q  126 tcttctttatcgccaaagtatggtgaaagatcagcaacattgaaggtagcagagactccatagtaatccaagggaaaaattcatactaataacttcccaa 225  Q
    ||||||| |||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| |||||| |||||||| ||||||||||    
T  42468842 tcttcttcatcgccaaagtatggtgaaagatcagcaacattgaaagtagcagagacaccatagtaatccaagg-aaaaatccatactaacaacttcccaa 42468940  T
Q  226 ggtggcttaggaattggacggaacatacataactttgttgtatccctcaattgttccttgatgactaaaagttctagtgaattgcattcatcttttcctt 325  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||| ||||| |||||||  |||||| |||||||||| | ||| |||| ||||||||||    
T  42468941 ggtggcttaggaattggacgggacatacataactttgttgtttccttcaatggttcctttgtgactagaagttctagtaacttgaattcctcttttcctt 42469040  T
Q  326 cattgaattcattgagtggtagacgtgccaacttgatgttaatcccatctttcacaaaagtgtagatgttggcataaccatcatataatgcatgatgatc 425  Q
    || |||||||||| ||||||||||||||||||||||| ||||| |||| |||||||||||||| ||||||||||||||||| |||||||||| || ||||    
T  42469041 caatgaattcattaagtggtagacgtgccaacttgattttaataccatatttcacaaaagtgttgatgttggcataaccataatataatgcacgacgatc 42469140  T
Q  426 atatttccaaggcctcttaagaaaaaggtggcaaacatccataggaataacatcacgccataacctttctttataattttttctaatggaaaatgaagca 525  Q
    ||||| ||| ||| ||  ||||  |  |||||||  |||||| ||||||||||||| |||||   ||||||||||||| ||   ||||||||||||   |    
T  42469141 atattgccatggcatcccaagatgagtgtggcaagtatccattggaataacatcacaccatacattttctttataattcttgtcaatggaaaatgagata 42469240  T
Q  526 atgttgtgttgagatactcttacctcactatccttgttgagccattgtagcttgtatggatcttgatgctcaatcatttgggactttaacttttttgcta 625  Q
    |||  ||||||||||||| |||||||  ||||||||||||||||||| |||||||||| |||||| || | ||||||| || ||||||||| || | |||    
T  42469241 atggagtgttgagatacttttacctcgttatccttgttgagccattgcagcttgtatgaatcttggtgattaatcattcggaactttaactcttcttcta 42469340  T
Q  626 tgtagtttgatggaacgttttcacatcttctgatattgatgatgtcattgcaagccatgtctt 688  Q
    | |||||||||| |||||||||||  ||| || ||| ||||||| ||||  || |||||||||    
T  42469341 tatagtttgatgcaacgttttcaccacttttgttatcgatgatgacattaaaaaccatgtctt 42469403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 146; E-Value: 2e-76
Query Start/End: Original strand, 12 - 189
Target Start/End: Complemental strand, 45166936 - 45166759
Alignment:
Q  12 attattctttagtgttctagagacttccacattattcgttattattctagagacttccatattattcttcatcattctccccgggttggagaagactcgt 111  Q
    ||||||||||||| ||||||||||||||| ||||||| | |  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45166936 attattctttagtcttctagagacttccatattattcttcaccattctagagacttccatattattcttcatcattctccccgggttggagaagactcgt 45166837  T
Q  112 cctcgagtcaaaagtcttctttatcgccaaagtatggtgaaagatcagcaacattgaaggtagcagagactccatagt 189  Q
    ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45166836 cctcgagtcgaaagtcttcttcatcgccaaagtatggtgaaagatcagcaacattgaaggtagcagagactccatagt 45166759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 627 - 759
Target Start/End: Complemental strand, 33246359 - 33246227
Alignment:
Q  627 gtagtttgatggaacgttttcacatcttctgatattgatgatgtcattgcaagccatgtcttgcgaggtgcaatgagtttgaaagatatcatgtcctagc 726  Q
    ||||||||||| || |||||||||| || || ||| ||||||||| || |||||||||||||| |||||||||||||||||||| ||||||| |||||||    
T  33246359 gtagtttgatgcaatgttttcacatattgtgctatcgatgatgtcgttacaagccatgtcttgagaggtgcaatgagtttgaaaaatatcatatcctagc 33246260  T
Q  727 catggttgttttttagctgccattgtttgcaag 759  Q
    ||||||| || ||| | |||  |||||||||||    
T  33246259 catggttcttctttggttgctgttgtttgcaag 33246227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 462 - 581
Target Start/End: Complemental strand, 13775924 - 13775805
Alignment:
Q  462 atccataggaataacatcacgccataacctttctttataattttttctaatggaaaatgaagcaatgttgtgttgagatactcttacctcactatccttg 561  Q
    |||||||| ||||||||||| |||| |  ||||||||||||| || | ||||||||||||   ||||  ||||||||||||| |||||||| ||||||||    
T  13775924 atccatagaaataacatcacaccatgaattttctttataattattgccaatggaaaatgagataatggagtgttgagatacttttacctcattatccttg 13775825  T
Q  562 ttgagccattgtagcttgta 581  Q
    ||||||||||| ||||||||    
T  13775824 ttgagccattgaagcttgta 13775805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 12 - 85
Target Start/End: Complemental strand, 45162044 - 45161971
Alignment:
Q  12 attattctttagtgttctagagacttccacattattcgttattattctagagacttccatattattcttcatca 85  Q
    ||||||||||||| ||||||||||||||| ||||||| | |  |||||||||||||||||||||||||||||||    
T  45162044 attattctttagtcttctagagacttccatattattcttcaccattctagagacttccatattattcttcatca 45161971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 209 - 284
Target Start/End: Complemental strand, 8739056 - 8738981
Alignment:
Q  209 tactaataacttcccaaggtggcttaggaattggacggaacatacataactttgttgtatccctcaattgttcctt 284  Q
    ||||||||| ||| |||||||||||||||| |||||| | || ||||||||||||| ||||| | |||||||||||    
T  8739056 tactaataatttctcaaggtggcttaggaactggacgaagcagacataactttgttttatccttgaattgttcctt 8738981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 12 - 89
Target Start/End: Complemental strand, 45162074 - 45161997
Alignment:
Q  12 attattctttagtgttctagagacttccacattattcgttattattctagagacttccatattattcttcatcattct 89  Q
    |||||||  |||| ||||| ||||||| | ||||||| ||| | ||||||||||||||||||||||||||| ||||||    
T  45162074 attattccctagtattctaaagacttctatattattctttagtcttctagagacttccatattattcttcaccattct 45161997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 12 - 89
Target Start/End: Complemental strand, 45166966 - 45166889
Alignment:
Q  12 attattctttagtgttctagagacttccacattattcgttattattctagagacttccatattattcttcatcattct 89  Q
    |||||||  |||| ||||| ||||||| | ||||||| ||| | ||||||||||||||||||||||||||| ||||||    
T  45166966 attattccctagtattctaaagacttctatattattctttagtcttctagagacttccatattattcttcaccattct 45166889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 86
Target Start/End: Original strand, 42471071 - 42471131
Alignment:
Q  26 ttctagagacttccacattattcgttattattctagagacttccatattattcttcatcat 86  Q
    |||||||| |||||| ||||||| | |  ||||||||||||||||||||||||||||||||    
T  42471071 ttctagagtcttccatattattcttcaccattctagagacttccatattattcttcatcat 42471131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 54 - 90
Target Start/End: Original strand, 50856062 - 50856098
Alignment:
Q  54 tattctagagacttccatattattcttcatcattctc 90  Q
    |||||||||||||||||||||||||||||||||||||    
T  50856062 tattctagagacttccatattattcttcatcattctc 50856098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 12 - 91
Target Start/End: Complemental strand, 43179520 - 43179441
Alignment:
Q  12 attattctttagtgttctagagacttccacattattcgttattattctagagacttccatattattcttcatcattctcc 91  Q
    ||||||||||  ||||| ||| | || |||||||||| |||||||| |  | ||||||||||||||||||||||||||||    
T  43179520 attattctttgatgttccagaaattttcacattattctttattattttcaaaacttccatattattcttcatcattctcc 43179441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 42 - 90
Target Start/End: Complemental strand, 8739287 - 8739239
Alignment:
Q  42 attattcgttattattctagagacttccatattattcttcatcattctc 90  Q
    ||||||| ||| |||||||||||| |||| |||||||||||||||||||    
T  8739287 attattcattagtattctagagacatccacattattcttcatcattctc 8739239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 82 - 122
Target Start/End: Complemental strand, 13776265 - 13776225
Alignment:
Q  82 atcattctccccgggttggagaagactcgtcctcgagtcaa 122  Q
    ||||||||||||||||||||  |||||||||||||||||||    
T  13776265 atcattctccccgggttggaagagactcgtcctcgagtcaa 13776225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 353 - 487
Target Start/End: Complemental strand, 45164067 - 45163933
Alignment:
Q  353 ccaacttgatgttaatcccatctttcacaaaagtgtagatgttggcataaccatcatataatgcatgatgatcatatttccaaggcctcttaagaaaaag 452  Q
    |||||||||| |||   |||||||||||||| |||||  ||||||||| ||| || ||||  |||||| | ||||||| |||||| |||  |||||  ||    
T  45164067 ccaacttgatcttagcaccatctttcacaaaggtgtaagtgttggcatgaccgtcgtatatggcatgacggtcatattgccaaggtctcccaagaagcag 45163968  T
Q  453 gtggcaaacatccataggaataacatcacgccata 487  Q
    ||| ||| ||||||| || || ||||||| |||||    
T  45163967 gtgacaagcatccatggggatgacatcacaccata 45163933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 325; Significance: 0; HSPs: 11)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 325; E-Value: 0
Query Start/End: Original strand, 26 - 674
Target Start/End: Complemental strand, 4879201 - 4878554
Alignment:
Q  26 ttctagagacttccacattattcgttattattctagagacttccatattattcttcatcattctccccgggttggagaagactcgtcctcgagtcaaaag 125  Q
    |||||||| |||||| ||||||| | |  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  4879201 ttctagagtcttccatattattcttcaccattctagagacttccatattattcttcatcattctccccgggttggagaagactcgtcctcgagtcgaaag 4879102  T
Q  126 tcttctttatcgccaaagtatggtgaaagatcagcaacattgaaggtagcagagactccatagtaatccaagggaaaaattcatactaataacttcccaa 225  Q
    ||||||| |||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| |||||| |||||||| ||||||||||    
T  4879101 tcttcttcatcgccaaagtatggtgaaagatcagcaacattgaaagtagcagagacaccatagtaatccaagg-aaaaatccatactaacaacttcccaa 4879003  T
Q  226 ggtggcttaggaattggacggaacatacataactttgttgtatccctcaattgttccttgatgactaaaagttctagtgaattgcattcatcttttcctt 325  Q
    ||||||||||||||||||||| ||||| ||||||||||||| ||| ||||| |||||||  |||||| |||||||||| | ||| |||| ||||||||||    
T  4879002 ggtggcttaggaattggacgggacatatataactttgttgtttccttcaatggttcctttgtgactagaagttctagtaacttgaattcctcttttcctt 4878903  T
Q  326 cattgaattcattgagtggtagacgtgccaacttgatgttaatcccatctttcacaaaagtgtagatgttggcataaccatcatataatgcatgatgatc 425  Q
    || |||||||||| ||||||||||||||||||||||| ||||| |||| |||||||||||||| |||||||||||||||||||||||||||| || ||||    
T  4878902 caatgaattcattaagtggtagacgtgccaacttgattttaataccatatttcacaaaagtgttgatgttggcataaccatcatataatgcacgacgatc 4878803  T
Q  426 atatttccaaggcctcttaagaaaaaggtggcaaacatccataggaataacatcacgccataacctttctttataattttttctaatggaaaatgaagca 525  Q
    ||||| ||| ||| ||  ||||  |  |||||||  |||||| ||||||| ||||| |||||   ||||||||||||| ||   ||||||||||||   |    
T  4878802 atattgccatggcatcccaagatgagtgtggcaagtatccattggaataatatcacaccatacattttctttataattcttgtcaatggaaaatgagata 4878703  T
Q  526 atgttgtgttgagatactcttacctcactatccttgttgagccattgtagcttgtatggatcttgatgctcaatcatttgggactttaacttttttgcta 625  Q
    |||  ||||||||||||| |||||||  ||||||||||||||||||| ||||||||||||||||| || | ||||||| || ||||||||| || | |||    
T  4878702 atggagtgttgagatacttttacctcgttatccttgttgagccattgcagcttgtatggatcttggtgattaatcattcggaactttaactcttcttcta 4878603  T
Q  626 tgtagtttgatggaacgttttcacatcttctgatattgatgatgtcatt 674  Q
    | |||||||||| ||| |||||||  ||| || ||| ||||||| ||||    
T  4878602 tatagtttgatgcaacattttcaccacttttgttatcgatgatgacatt 4878554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 187 - 586
Target Start/End: Original strand, 36377740 - 36378130
Alignment:
Q  187 agtaatccaagggaaaaattcatactaataacttcccaaggtggcttaggaattggacggaacatacataactttgttgtatccctcaattgttccttga 286  Q
    |||||||||||||||||||  ||| ||| | ||||||||||||||||||||| |||||| | || ||||||||||||| ||||| | ||| ||||| ||     
T  36377740 agtaatccaagggaaaaatcaatagtaacatcttcccaaggtggcttaggaactggacgaagcagacataactttgttttatccttgaatggttccatgt 36377839  T
Q  287 tgactaaaagttctagtgaattgcattcatcttttccttcattgaattcattgagtggtagacgtgccaacttgatgttaatcccatctttcacaaaagt 386  Q
     | |||||| | | ||||  ||| |||| ||||||||||||         |||||||| ||| |||| |||||||| |||||| ||||  |||| |||||    
T  36377840 cggctaaaaatccaagtggtttgaattcctcttttccttca---------ttgagtggcagaggtgcaaacttgattttaatcgcatccgtcacgaaagt 36377930  T
Q  387 gtagatgttggcataaccatcatataatgcatgatgatcatatttccaaggcctcttaagaaaaaggtggcaaacatccataggaataacatcacgccat 486  Q
    | || ||||||||||||||||  ||||||||||| ||||||||| ||||||||||  ||||  || |||||||  |||||| ||||||||||||| ||||    
T  36377931 gcaggtgttggcataaccatcgaataatgcatgacgatcatattgccaaggcctcccaagatgaatgtggcaagtatccattggaataacatcacaccat 36378030  T
Q  487 aacctttctttataattttttctaatggaaaatgaagcaatgttgtgttgagatactcttacctcactatccttgttgagccattgtagcttgtatggat 586  Q
    |   |||| |||||||| ||   ||||||||||||| ||     ||||||||||| | |||||||| ||||||||||||||||||| | |||||||||||    
T  36378031 acattttcgttataattgttgtcaatggaaaatgaaacagctgagtgttgagataattttacctcattatccttgttgagccattgcaacttgtatggat 36378130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 12 - 122
Target Start/End: Original strand, 36377501 - 36377621
Alignment:
Q  12 attattctttagtgttctagagacttccacattattcgttattattctagagacttccatattattcttc----------atcattctccccgggttgga 101  Q
    ||||||||||||| ||||||||||||||||||||||| ||| |||||||||| |||||||||||||||||          ||||||||||||||||||||    
T  36377501 attattctttagtcttctagagacttccacattattccttagtattctagagtcttccatattattcttcaccattctctatcattctccccgggttgga 36377600  T
Q  102 gaagactcgtcctcgagtcaa 122  Q
      |||||||||||||||||||    
T  36377601 agagactcgtcctcgagtcaa 36377621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 12 - 89
Target Start/End: Original strand, 21268448 - 21268525
Alignment:
Q  12 attattctttagtgttctagagacttccacattattcgttattattctagagacttccatattattcttcatcattct 89  Q
    |||||||||||||||||||||||||||||||||||||  || |||||||||| |||||||||||||||||| ||||||    
T  21268448 attattctttagtgttctagagacttccacattattctctagtattctagagtcttccatattattcttcaccattct 21268525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 12 - 90
Target Start/End: Original strand, 36379786 - 36379864
Alignment:
Q  12 attattctttagtgttctagagacttccacattattcgttattattctagagacttccatattattcttcatcattctc 90  Q
    ||||||||||||| |||||||||||||||||||||||  || |||||||||| |||||||||||||||||| |||||||    
T  36379786 attattctttagtcttctagagacttccacattattccctagtattctagagtcttccatattattcttcaccattctc 36379864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 85
Target Start/End: Original strand, 21268478 - 21268551
Alignment:
Q  12 attattctttagtgttctagagacttccacattattcgttattattctagagacttccatattattcttcatca 85  Q
    |||||||| |||| |||||||| |||||| ||||||| | |  |||||||||||||||||||||||||||||||    
T  21268478 attattctctagtattctagagtcttccatattattcttcaccattctagagacttccatattattcttcatca 21268551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 26 - 85
Target Start/End: Complemental strand, 4876873 - 4876814
Alignment:
Q  26 ttctagagacttccacattattcgttattattctagagacttccatattattcttcatca 85  Q
    |||||||| |||||| ||||||| | |  |||||||||||||||||||||||||||||||    
T  4876873 ttctagagtcttccatattattcttcaccattctagagacttccatattattcttcatca 4876814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 26 - 85
Target Start/End: Original strand, 24519457 - 24519516
Alignment:
Q  26 ttctagagacttccacattattcgttattattctagagacttccatattattcttcatca 85  Q
    |||||||| |||||| ||||||| | |  |||||||||||||||||||||||||||||||    
T  24519457 ttctagagtcttccatattattcttcaccattctagagacttccatattattcttcatca 24519516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 79
Target Start/End: Original strand, 21268418 - 21268485
Alignment:
Q  12 attattctttagtgttctagagacttccacattattcgttattattctagagacttccatattattct 79  Q
    |||||||  |||| ||||||||||||| | ||||||| ||| | ||||||||||||||| ||||||||    
T  21268418 attattccctagtattctagagacttctatattattctttagtgttctagagacttccacattattct 21268485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 12 - 78
Target Start/End: Original strand, 36377471 - 36377537
Alignment:
Q  12 attattctttagtgttctagagacttccacattattcgttattattctagagacttccatattattc 78  Q
    |||||||  |||| ||||||||||||| | ||||||| ||| | ||||||||||||||| |||||||    
T  36377471 attattccctagtattctagagacttctatattattctttagtcttctagagacttccacattattc 36377537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 12 - 78
Target Start/End: Original strand, 36379756 - 36379822
Alignment:
Q  12 attattctttagtgttctagagacttccacattattcgttattattctagagacttccatattattc 78  Q
    |||||||  |||| ||||||||||||| | ||||||| ||| | ||||||||||||||| |||||||    
T  36379756 attattccctagtattctagagacttctatattattctttagtcttctagagacttccacattattc 36379822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 167; Significance: 5e-89; HSPs: 12)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 167; E-Value: 5e-89
Query Start/End: Original strand, 12 - 315
Target Start/End: Original strand, 1779778 - 1780084
Alignment:
Q  12 attattctttagtgttctagagacttccacattattcgttattattctagagacttccatattattcttcatcattctccccgggttggagaagactcgt 111  Q
    |||||||||||||||| | |||||||||||||| ||| ||| |||||||  ||||||||||||||||||||||||||||||| ||||||||||||||| |    
T  1779778 attattctttagtgttatggagacttccacatttttctttagtattctaaggacttccatattattcttcatcattctccccaggttggagaagactcat 1779877  T
Q  112 cctcgagtcaaaagtcttctttatcgccaaagtatggtgaaagatcagcaacattgaagg----tagcagagactccatagtaatccaagggaaaaattc 207  Q
    |||| |||| ||||||||||| ||| | | ||||||| |||| |||||||||||| ||||    ||||||||||||||||||||||| |||||||||| |    
T  1779878 cctcaagtcgaaagtcttcttcatcactagagtatggggaaaaatcagcaacattaaaggtacatagcagagactccatagtaatcc-agggaaaaatcc 1779976  T
Q  208 atactaataacttcccaaggtggcttaggaattggacggaacatacataactttgttgtatccctcaattgttccttgatgactaaaagttctagtgaat 307  Q
    ||||||| |||| |||||||||||||||||||||||||| |||| |||||||||||||||||| ||||| |||||||   |||||||||||||||||| |    
T  1779977 atactaacaactacccaaggtggcttaggaattggacgggacattcataactttgttgtatccttcaatggttccttcgcgactaaaagttctagtgact 1780076  T
Q  308 tgcattca 315  Q
    ||||||||    
T  1780077 tgcattca 1780084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 187 - 586
Target Start/End: Original strand, 11850465 - 11850854
Alignment:
Q  187 agtaatccaagggaaaaattcatactaataacttcccaaggtggcttaggaattggacggaacatacataactttgttgtatccctcaattgttccttga 286  Q
    |||||||||||||||||||  ||| |||   ||||||||||||||||||||| |||||| | || |||||||||| || ||||| | ||| ||| | ||     
T  11850465 agtaatccaagggaaaaatcaatattaacgtcttcccaaggtggcttaggaactggacgaagcagacataactttattttatccttgaatggttgcatgt 11850564  T
Q  287 tgactaaaagttctagtgaattgcattcatcttttccttcattgaattcattgagtggtagacgtgccaacttgatgttaatcccatctttcacaaaagt 386  Q
     | |||||| | | ||||  ||| |||| ||||||||||||         |||||||| ||| |||| |||||||| |||||| ||||  |||| |||||    
T  11850565 cggctaaaaatccaagtggtttgaattcctcttttccttca---------ttgagtggcagaggtgcaaacttgattttaatcgcatccgtcacgaaagt 11850655  T
Q  387 gtagatgttggcataaccatcatataatgcatgatgatcatatttccaaggcctcttaagaaaaaggtggcaaacatccataggaataacatcacgccat 486  Q
    | || | ||||||||||||||  ||||||||||||||||||||| ||||||||||  ||||  || |||||||  |||||| ||||||||||||| ||||    
T  11850656 gcaggtcttggcataaccatcgaataatgcatgatgatcatattaccaaggcctcccaagatgaatgtggcaagtatccattggaataacatcacaccat 11850755  T
Q  487 aacctttctttataattttttctaatggaaaatgaagcaatgttgtgttgagatactcttacctcactatccttgttgagccattgtagcttgtatggat 586  Q
     || |||   ||||||| ||   ||||||||||||| || |   ||||||||||| | ||||||||  ||||||||||||| |||| | |||||||||||    
T  11850756 -acattttcgtataattgttgtcaatggaaaatgaaacagttgagtgttgagataattttacctcatcatccttgttgagctattgcaacttgtatggat 11850854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 12 - 89
Target Start/End: Complemental strand, 37207737 - 37207660
Alignment:
Q  12 attattctttagtgttctagagacttccacattattcgttattattctagagacttccatattattcttcatcattct 89  Q
    ||||||||||||| |||||||||||||||||||||||  || |||||||||| |||||||||||||||||||||||||    
T  37207737 attattctttagtcttctagagacttccacattattccctagtattctagagtcttccatattattcttcatcattct 37207660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 12 - 90
Target Start/End: Complemental strand, 22600777 - 22600699
Alignment:
Q  12 attattctttagtgttctagagacttccacattattcgttattattctagagacttccatattattcttcatcattctc 90  Q
    |||||| |||||| |||||||||||||||||||||||  || |||||||||| ||||||||||||||||||||||||||    
T  22600777 attattatttagtcttctagagacttccacattattccctaatattctagagtcttccatattattcttcatcattctc 22600699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 12 - 90
Target Start/End: Original strand, 23164559 - 23164637
Alignment:
Q  12 attattctttagtgttctagagacttccacattattcgttattattctagagacttccatattattcttcatcattctc 90  Q
    ||||||||||||| |||||||||||||||||||||||  || |||||||||| |||||||||||||||||| |||||||    
T  23164559 attattctttagtcttctagagacttccacattattccctagtattctagagtcttccatattattcttcaccattctc 23164637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 12 - 122
Target Start/End: Original strand, 11850226 - 11850346
Alignment:
Q  12 attattctttagtgttctagagacttccacattattcgttattattctagagacttccatattattcttc----------atcattctccccgggttgga 101  Q
    ||||||||||||| |||||||||||||||||||||||  || ||||| |||| |||||||||||||||||          ||||||||||||||||||||    
T  11850226 attattctttagtcttctagagacttccacattattccatagtattcaagagtcttccatattattcttcaccattctctatcattctccccgggttgga 11850325  T
Q  102 gaagactcgtcctcgagtcaa 122  Q
      |||||||||||||||||||    
T  11850326 agagactcgtcctcgagtcaa 11850346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 12 - 90
Target Start/End: Original strand, 11852484 - 11852562
Alignment:
Q  12 attattctttagtgttctagagacttccacattattcgttattattctagagacttccatattattcttcatcattctc 90  Q
    ||||||||||||| |||||||||||||| |||||||   || |||||||||| |||||||||||||||||| |||||||    
T  11852484 attattctttagtcttctagagacttcctcattatttcatagtattctagagtcttccatattattcttcaccattctc 11852562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 85
Target Start/End: Complemental strand, 37207707 - 37207634
Alignment:
Q  12 attattctttagtgttctagagacttccacattattcgttattattctagagacttccatattattcttcatca 85  Q
    |||||||  |||| |||||||| |||||| ||||||| | || |||||||||||||||||||||||||||||||    
T  37207707 attattccctagtattctagagtcttccatattattcttcatcattctagagacttccatattattcttcatca 37207634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 35 - 80
Target Start/End: Original strand, 1779741 - 1779786
Alignment:
Q  35 cttccacattattcgttattattctagagacttccatattattctt 80  Q
    |||| ||||||||| ||| |||||||||||||||||||||||||||    
T  1779741 cttcgacattattctttagtattctagagacttccatattattctt 1779786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 80
Target Start/End: Original strand, 1779748 - 1779816
Alignment:
Q  12 attattctttagtgttctagagacttccacattattcgttattattctagagacttccatattattctt 80  Q
    ||||||||||||| ||||||||||||||| ||||||| ||| | || | |||||||||| ||| |||||    
T  1779748 attattctttagtattctagagacttccatattattctttagtgttatggagacttccacatttttctt 1779816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 12 - 78
Target Start/End: Original strand, 23164529 - 23164595
Alignment:
Q  12 attattctttagtgttctagagacttccacattattcgttattattctagagacttccatattattc 78  Q
    |||||||  |||| ||||||||||||| | ||||||| ||| | ||||||||||||||| |||||||    
T  23164529 attattccctagtattctagagacttctatattattctttagtcttctagagacttccacattattc 23164595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 81
Target Start/End: Original strand, 1779514 - 1779583
Alignment:
Q  12 attattctttagtgttctagagacttccacattattcgttattattctagagacttccatattattcttc 81  Q
    |||||||  |||| || |||||||||| | ||||||| ||| | ||||||| ||||||||||||||||||    
T  1779514 attattccatagtattttagagacttctatattattctttagttttctagaaacttccatattattcttc 1779583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 134; Significance: 2e-69; HSPs: 9)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 12 - 189
Target Start/End: Original strand, 2404146 - 2404323
Alignment:
Q  12 attattctttagtgttctagagacttccacattattcgttattattctagagacttccatattattcttcatcattctccccgggttggagaagactcgt 111  Q
    ||||||||||||| ||||||||| |||||||||||||  || ||| |||||| |||| || |||||||||||||||||||||||||||||||||||||||    
T  2404146 attattctttagtcttctagagatttccacattattctctagtatcctagagtcttctattttattcttcatcattctccccgggttggagaagactcgt 2404245  T
Q  112 cctcgagtcaaaagtcttctttatcgccaaagtatggtgaaagatcagcaacattgaaggtagcagagactccatagt 189  Q
    ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2404246 cctcgagtcgaaagtcttcttcatcgccaaagtatggtgaaagatcagcaacattgaaggtagcagagactccatagt 2404323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 12 - 132
Target Start/End: Original strand, 29833394 - 29833514
Alignment:
Q  12 attattctttagtgttctagagacttccacattattcgttattattctagagacttccatattattcttcatcattctccccgggttggagaagactcgt 111  Q
    |||||||||||||||||||||||||||||||||||||  || |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  29833394 attattctttagtgttctagagacttccacattattctctagtattctagagtcttccatattattcttcatcattctccccgggttggagaagactcgt 29833493  T
Q  112 cctcgagtcaaaagtcttctt 132  Q
    |||||||||  ||||||||||    
T  29833494 cctcgagtcggaagtcttctt 29833514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 462 - 729
Target Start/End: Complemental strand, 4820564 - 4820302
Alignment:
Q  462 atccataggaataacatcacgccataacctttctttataattttttctaatggaaaatgaagcaatgttgtgttgagatactcttacctcactatccttg 561  Q
    |||||||||||||||||||| ||||||| |||||||||||||| |||| ||||||||| ||  ||||  | ||| ||||||| |||||| | ||||||||    
T  4820564 atccataggaataacatcacaccataacttttctttataatttgttctgatggaaaatcaaataatg--gagttaagatacttttaccttagtatccttg 4820467  T
Q  562 ttgagccattgtagcttgtatggatcttgatgctcaatcatttgggactttaacttttttgctatgtagtttgatggaacgttttcacatcttctgatat 661  Q
    |||  |||||| | ||||||||||| ||| |||| ||||| |  | |||||| ||||| | ||||  ||||||||  || |||||||||||||   ||||    
T  4820466 ttggaccattgcaacttgtatggatattggtgcttaatcactgagaactttagcttttctcctatacagtttgatacaatgttttcacatctt---atat 4820370  T
Q  662 tgatgatgtcattgcaagccatgtcttgcgaggtgcaatgagtttgaaagatatcatgtcctagccat 729  Q
    |  ||||  |||| ||| ||||||||| ||| |||||| |||| |||| |||||  |||| |||||||    
T  4820369 tattgataacattacaaaccatgtcttacgaagtgcaacgagtgtgaaggatattgtgtcttagccat 4820302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 462 - 729
Target Start/End: Complemental strand, 4832364 - 4832102
Alignment:
Q  462 atccataggaataacatcacgccataacctttctttataattttttctaatggaaaatgaagcaatgttgtgttgagatactcttacctcactatccttg 561  Q
    |||||||||||||||||||| ||||||| |||||||||||||| |||| ||||||||| ||  ||||  | ||| ||||||| |||||| | ||||||||    
T  4832364 atccataggaataacatcacaccataacttttctttataatttgttctgatggaaaatcaaataatg--gagttaagatacttttaccttagtatccttg 4832267  T
Q  562 ttgagccattgtagcttgtatggatcttgatgctcaatcatttgggactttaacttttttgctatgtagtttgatggaacgttttcacatcttctgatat 661  Q
    |||  |||||| | ||||||||||| ||| |||| ||||| |  | |||||| ||||| | ||||  ||||||||  || |||||||||||||   ||||    
T  4832266 ttggaccattgcaacttgtatggatattggtgcttaatcactgagaactttagcttttctcctatacagtttgatacaatgttttcacatctt---atat 4832170  T
Q  662 tgatgatgtcattgcaagccatgtcttgcgaggtgcaatgagtttgaaagatatcatgtcctagccat 729  Q
    |  ||||  |||| ||| ||||||||| ||| |||||| |||| |||| |||||  |||| |||||||    
T  4832169 tattgataacattacaaaccatgtcttacgaagtgcaacgagtgtgaaggatattgtgtcttagccat 4832102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 462 - 581
Target Start/End: Complemental strand, 10910825 - 10910706
Alignment:
Q  462 atccataggaataacatcacgccataacctttctttataattttttctaatggaaaatgaagcaatgttgtgttgagatactcttacctcactatccttg 561  Q
    |||||||| ||||||||||| ||||||  ||||||||||||| || | ||||||||||||   |||   ||||||||||||| |||||||| ||||||||    
T  10910825 atccatagaaataacatcacaccataaattttctttataattattgccaatggaaaatgagataatagagtgttgagatacttttacctcattatccttg 10910726  T
Q  562 ttgagccattgtagcttgta 581  Q
    ||||||||||| ||||||||    
T  10910725 ttgagccattgaagcttgta 10910706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 12 - 90
Target Start/End: Original strand, 734897 - 734975
Alignment:
Q  12 attattctttagtgttctagagacttccacattattcgttattattctagagacttccatattattcttcatcattctc 90  Q
    ||||||||||||| ||||| |||||||||||||||||  || |||||||||| ||||||||||||||||||||||||||    
T  734897 attattctttagtcttctaaagacttccacattattccctagtattctagagtcttccatattattcttcatcattctc 734975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 264
Target Start/End: Original strand, 29833618 - 29833700
Alignment:
Q  182 tccatagtaatccaagggaaaaattcatactaataacttcccaaggtggcttaggaattggacggaacatacataactttgtt 264  Q
    |||| ||||||| |||||||||||  ||| ||| | ||| ||||||||||||||||||||||||   |||| |||||||||||    
T  29833618 tccaaagtaatctaagggaaaaatcaatagtaacatctttccaaggtggcttaggaattggacgaggcatatataactttgtt 29833700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 370 - 487
Target Start/End: Original strand, 2408224 - 2408341
Alignment:
Q  370 ccatctttcacaaaagtgtagatgttggcataaccatcatataatgcatgatgatcatatttccaaggcctcttaagaaaaaggtggcaaacatccatag 469  Q
    |||||||||||||| |||||  |||| |||| ||| || ||||  |||||| ||||||||| |||||| |||| |||||  ||||| ||| ||||||| |    
T  2408224 ccatctttcacaaaggtgtaagtgtttgcatgaccgtcgtatatggcatgacgatcatattcccaaggtctctcaagaagcaggtgacaagcatccatgg 2408323  T
Q  470 gaataacatcacgccata 487  Q
    | || ||||||| |||||    
T  2408324 ggatgacatcacaccata 2408341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 79
Target Start/End: Original strand, 29833364 - 29833431
Alignment:
Q  12 attattctttagtgttctagagacttccacattattcgttattattctagagacttccatattattct 79  Q
    |||||||  |||| ||||||||||||| | ||||||| ||| | ||||||||||||||| ||||||||    
T  29833364 attattccctagtattctagagacttctatattattctttagtgttctagagacttccacattattct 29833431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 127; Significance: 4e-65; HSPs: 3)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 127; E-Value: 4e-65
Query Start/End: Original strand, 182 - 688
Target Start/End: Complemental strand, 31281 - 30780
Alignment:
Q  182 tccatagtaatccaagggaaaaattcatactaataacttcccaaggtggcttaggaattggacggaacatacataactttgttgtatccctcaattgttc 281  Q
    |||| |||||||||||||||||||| ||| ||| | ||||||||||||||||||||  | ||||  | ||  ||||||||||| | | | | ||| ||||    
T  31281 tccaaagtaatccaagggaaaaattaatagtaacatcttcccaaggtggcttaggatctagacgagatatgtataactttgttttcttcttgaatggttc 31182  T
Q  282 cttgatgactaaaagttctagtgaattgcattcatcttttccttcattgaattcattgagtggtagacgtgccaacttgatgttaatcccatctttcaca 381  Q
    |||   || | ||||| | |||   ||| |||| | |||||| |||||||||||||||||||||||| ||||||| ||||| | |||| |||||||||      
T  31181 ctttgcgagtgaaagtccaagttgcttgaattccttttttccatcattgaattcattgagtggtagaggtgccaagttgatttcaatcacatctttcaag 31082  T
Q  382 aaagtgtagatgttggcataaccatcatataatgcatgatgatcatatttccaaggcctcttaagaaaaaggtggcaaacatccataggaataacatcac 481  Q
    |||||| || | |||||||||||||| ||||||||| ||||||||||||  |||||| || | |     | |||| |||  ||||| |||||||||||||    
T  31081 aaagtgcaggtattggcataaccatcgtataatgcacgatgatcatattgacaaggcatcgtga-----atgtgggaaatttccatcggaataacatcac 30987  T
Q  482 gccataacctttctttataattttttctaatggaaaatgaagcaatgttgtgttgagatactcttacctcactatccttgttgagccattgtagcttgta 581  Q
     ||||||  ||||||||||||| || | ||||||||||||   ||||  ||||||||||||| |||||||| ||||||||||||||||||| ||||||||    
T  30986 accataaattttctttataattattgccaatggaaaatgagaaaatggagtgttgagatacttttacctcattatccttgttgagccattgcagcttgta 30887  T
Q  582 tggatcttgatgctcaatcatttgggactttaacttttttgctatgtagtttgatggaacgttttcacatcttctgatattgatgatgtcattgcaagcc 681  Q
    |||||||||  | | | ||  ||||||||||||||||| |||||| |||||||||| ||  |||||||| ||| || ||| || |||  |||| ||| ||    
T  30886 tggatcttggcgattactcggttgggactttaacttttctgctatatagtttgatgcaaaattttcacaacttttgttatcgacgatagcattacaaacc 30787  T
Q  682 atgtctt 688  Q
    |||||||    
T  30786 atgtctt 30780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050; HSP #2
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 12 - 90
Target Start/End: Complemental strand, 29199 - 29121
Alignment:
Q  12 attattctttagtgttctagagacttccacattattcgttattattctagagacttccatattattcttcatcattctc 90  Q
    ||||||||| | ||||||||||||||||||||| ||| ||| | || ||||||||||||||||||||||||||||||||    
T  29199 attattcttgaatgttctagagacttccacattgttctttagtgttttagagacttccatattattcttcatcattctc 29121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050; HSP #3
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 12 - 89
Target Start/End: Complemental strand, 31517 - 31440
Alignment:
Q  12 attattctttagtgttctagagacttccacattattcgttattattctagagacttccatattattcttcatcattct 89  Q
    ||||||||| ||||||||||||||||||||||| ||| ||| | || |||||| ||||||||||||||||||||||||    
T  31517 attattcttgagtgttctagagacttccacattgttctttagtgttttagagagttccatattattcttcatcattct 31440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 107; Significance: 3e-53; HSPs: 13)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 13 - 175
Target Start/End: Original strand, 34576903 - 34577065
Alignment:
Q  13 ttattctttagtgttctagagacttccacattattcgttattattctagagacttccatattattcttcatcattctccccgggttggagaagactcgtc 112  Q
    |||||||||||| || |||||||||||| ||||||| ||| | ||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||    
T  34576903 ttattctttagtattttagagacttccatattattctttagtgttctagagacttccacattattcttcatcattctccccaggttggagaagactcgtc 34577002  T
Q  113 ctcgagtcaaaagtcttctttatcgccaaagtatggtgaaagatcagcaacattgaaggtagc 175  Q
    |||  ||| ||||| ||||| |||||||||||||||||||||||||| |||||||||||||||    
T  34577003 ctcttgtcgaaagtattcttcatcgccaaagtatggtgaaagatcagtaacattgaaggtagc 34577065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 187 - 586
Target Start/End: Complemental strand, 31488793 - 31488404
Alignment:
Q  187 agtaatccaagggaaaaattcatactaataacttcccaaggtggcttaggaattggacggaacatacataactttgttgtatccctcaattgttccttga 286  Q
    |||||||||||||||||||  ||| ||| | ||||||||||||||||||||| |||||| | || ||||||||||||| ||||| | ||| ||||| ||     
T  31488793 agtaatccaagggaaaaatcaatagtaacatcttcccaaggtggcttaggaactggacgaagcagacataactttgttttatccttgaatggttccatgt 31488694  T
Q  287 tgactaaaagttctagtgaattgcattcatcttttccttcattgaattcattgagtggtagacgtgccaacttgatgttaatcccatctttcacaaaagt 386  Q
     | |||||| | | ||||  ||| |||| ||||||||||||||||         |||| ||| |||| |||||||| |||||| ||||  |||| |||||    
T  31488693 cggctaaaaat-caagtggtttgaattcctcttttccttcattga---------gtggcagaggtgcaaacttgattttaatcgcatccatcacgaaagt 31488604  T
Q  387 gtagatgttggcataaccatcatataatgcatgatgatcatatttccaaggcctcttaagaaaaaggtggcaaacatccataggaataacatcacgccat 486  Q
    | || ||||||||||||||||  ||||||||||| ||||||||| ||||||||||  ||||  || |||||||  |||||| ||||||||||||| ||||    
T  31488603 gcaggtgttggcataaccatcgaataatgcatgacgatcatattgccaaggcctcccaagatgaatgtggcaagtatccattggaataacatcacaccat 31488504  T
Q  487 aacctttctttataattttttctaatggaaaatgaagcaatgttgtgttgagatactcttacctcactatccttgttgagccattgtagcttgtatggat 586  Q
    |   |||| |||||||  ||   |||| ||||||||  |     ||||||||||| | |||||||| ||||||||||||||||||| | |||||||||||    
T  31488503 acattttcgttataatcgttgtcaatgaaaaatgaaatagccgagtgttgagataattttacctcattatccttgttgagccattgcaacttgtatggat 31488404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 491 - 649
Target Start/End: Original strand, 39816817 - 39816975
Alignment:
Q  491 tttctttataattttttctaatggaaaatgaagcaatgttgtgttgagatactcttacctcactatccttgttgagccattgtagcttgtatggatcttg 590  Q
    ||||||||||||| || | ||||||||||||   ||||  ||||||||||||| ||||| || ||||||||||||||||||| | |||||||||||||||    
T  39816817 tttctttataattattgccaatggaaaatgagataatggagtgttgagatacttttaccacattatccttgttgagccattgcaacttgtatggatcttg 39816916  T
Q  591 atgctcaatcatttgggactttaacttttttgctatgtagtttgatggaacgttttcac 649  Q
     || ||||||  | ||||||||||||||| | |||| |||||||||| |||||||||||    
T  39816917 gtgttcaatcgatcgggactttaacttttctactatatagtttgatgcaacgttttcac 39816975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 27 - 90
Target Start/End: Complemental strand, 15729933 - 15729870
Alignment:
Q  27 tctagagacttccacattattcgttattattctagagacttccatattattcttcatcattctc 90  Q
    |||||||||||||||||||||| ||||| |||||||||| ||||||||||||||||||||||||    
T  15729933 tctagagacttccacattattctttattgttctagagacatccatattattcttcatcattctc 15729870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 12 - 90
Target Start/End: Complemental strand, 31489032 - 31488954
Alignment:
Q  12 attattctttagtgttctagagacttccacattattcgttattattctagagacttccatattattcttcatcattctc 90  Q
    ||||||||||||| || ||||||||||||||||||||  || |||||||||| |||||||||||||||||| |||||||    
T  31489032 attattctttagtcttttagagacttccacattattccctagtattctagagtcttccatattattcttcaccattctc 31488954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 462 - 580
Target Start/End: Original strand, 42276248 - 42276366
Alignment:
Q  462 atccataggaataacatcacgccataacctttctttataattttttctaatggaaaatgaagcaatgttgtgttgagatactcttacctcactatccttg 561  Q
    |||||||| ||||||||||| ||||||  ||||||||||||| || | ||||||||||||   |||   ||||||||||||| |||||||| ||||||||    
T  42276248 atccatagaaataacatcacaccataaattttctttataattattgccaatggaaaatgagataatagagtgttgagatacttttacctcattatccttg 42276347  T
Q  562 ttgagccattgtagcttgt 580  Q
    ||||||| ||| |||||||    
T  42276348 ttgagccgttgaagcttgt 42276366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 12 - 90
Target Start/End: Complemental strand, 31486748 - 31486670
Alignment:
Q  12 attattctttagtgttctagagacttccacattattcgttattattctagagacttccatattattcttcatcattctc 90  Q
    |||||||| |||| |||||||| ||||||||||||||  || |||||||||| |||||||||||||||||| |||||||    
T  31486748 attattctctagtcttctagaggcttccacattattccctagtattctagagtcttccatattattcttcaccattctc 31486670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 78
Target Start/End: Complemental strand, 29801840 - 29801773
Alignment:
Q  12 attattctttagtgttctagagacttccacattattcgtt-attattctagagacttccatattattc 78  Q
    |||||||||| |||||||||||||||||| ||||||  || |||||||||||||||||||||||||||    
T  29801840 attattctttggtgttctagagacttccatattatttttttattattctagagacttccatattattc 29801773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 48
Target Start/End: Original strand, 34576932 - 34576968
Alignment:
Q  12 attattctttagtgttctagagacttccacattattc 48  Q
    |||||||||||||||||||||||||||||||||||||    
T  34576932 attattctttagtgttctagagacttccacattattc 34576968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 325 - 417
Target Start/End: Original strand, 39816669 - 39816761
Alignment:
Q  325 tcattgaattcattgagtggtagacgtgccaacttgatgttaatcccatctttcacaaaagtgtagatgttggcataaccatcatataatgca 417  Q
    |||||||||||||| |   ||||| |||||||||| || | |||| |||||||||| |||||| || | |||||||||||||| |||||||||    
T  39816669 tcattgaattcattaatgtgtagaggtgccaactttatttcaatcacatctttcacgaaagtgcaggtattggcataaccatcgtataatgca 39816761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 52 - 90
Target Start/End: Original strand, 5164285 - 5164323
Alignment:
Q  52 attattctagagacttccatattattcttcatcattctc 90  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  5164285 attattctagagacttccatattattcttgatcattctc 5164323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 77
Target Start/End: Complemental strand, 29801870 - 29801805
Alignment:
Q  12 attattctttagtgttctagagacttccacattattcgttattattctagagacttccatattatt 77  Q
    ||||||||||||| ||||||| ||||||  ||||||| ||  | ||||||||||||||||||||||    
T  29801870 attattctttagtattctagatacttccctattattctttggtgttctagagacttccatattatt 29801805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 12 - 87
Target Start/End: Complemental strand, 23859846 - 23859767
Alignment:
Q  12 attattctttagtgttctagagactt----ccacattattcgttattattctagagacttccatattattcttcatcatt 87  Q
    |||||||||||||||||||||| |||    ||| ||||||| ||| ||||||||||  ||||||||  ||||||||||||    
T  23859846 attattctttagtgttctagaggcttaattccatattattcattagtattctagagtgttccatatctttcttcatcatt 23859767  T

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Target: chr3 (Bit Score: 82; Significance: 3e-38; HSPs: 5)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 64 - 189
Target Start/End: Complemental strand, 8535430 - 8535305
Alignment:
Q  64 acttccatattattcttcatcattctccccgggttggagaagactcgtcctcgagtcaaaagtcttctttatcgccaaagtatggtgaaagatcagcaac 163  Q
    ||||||||||||| |||||||||| ||| ||||||||||||||||||||||||| || ||| |||||||||| | |||| ||||||||||||||| ||||    
T  8535430 acttccatattatacttcatcattatcctcgggttggagaagactcgtcctcgaatcgaaaatcttctttattgtcaaaatatggtgaaagatcaacaac 8535331  T
Q  164 attgaaggtagcagagactccatagt 189  Q
    ||| ||||||||||||||||||||||    
T  8535330 attaaaggtagcagagactccatagt 8535305  T

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Target: chr3; HSP #2
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 462 - 581
Target Start/End: Complemental strand, 4532609 - 4532490
Alignment:
Q  462 atccataggaataacatcacgccataacctttctttataattttttctaatggaaaatgaagcaatgttgtgttgagatactcttacctcactatccttg 561  Q
    |||||||| ||||||||||| |||| |  ||||||||||||| || | ||||||||||||   ||||  ||||||||||||| |||||||| ||||||||    
T  4532609 atccatagaaataacatcacaccattaattttctttataattattgccaatggaaaatgagataatggagtgttgagatacttttacctcattatccttg 4532510  T
Q  562 ttgagccattgtagcttgta 581  Q
    ||||||||||| ||||||||    
T  4532509 ttgagccattgaagcttgta 4532490  T

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Target: chr3; HSP #3
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 12 - 85
Target Start/End: Original strand, 18966443 - 18966518
Alignment:
Q  12 attattctttagtgttctagagacttccacattattcgttattattct--agagacttccatattattcttcatca 85  Q
    |||||||||| |||||||||||||||||||||||||| ||| ||||||  ||||||||||||||||||||||||||    
T  18966443 attattctttggtgttctagagacttccacattattctttagtattctagagagacttccatattattcttcatca 18966518  T

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Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 85
Target Start/End: Complemental strand, 39578308 - 39578235
Alignment:
Q  12 attattctttagtgttctagagacttccacattattcgttattattctagagacttccatattattcttcatca 85  Q
    ||||||||||||||||||  | |||| |||||||||| ||| |||||||||| ||||||||| |||||||||||    
T  39578308 attattctttagtgttctgtaaactttcacattattctttagtattctagagtcttccatatcattcttcatca 39578235  T

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Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 82 - 122
Target Start/End: Complemental strand, 4532950 - 4532910
Alignment:
Q  82 atcattctccccgggttggagaagactcgtcctcgagtcaa 122  Q
    ||||||||||||||||||||  |||||||||||||||||||    
T  4532950 atcattctccccgggttggaagagactcgtcctcgagtcaa 4532910  T

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Target: chr6 (Bit Score: 76; Significance: 1e-34; HSPs: 2)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 628 - 759
Target Start/End: Complemental strand, 20643289 - 20643158
Alignment:
Q  628 tagtttgatggaacgttttcacatcttctgatattgatgatgtcattgcaagccatgtcttgcgaggtgcaatgagtttgaaagatatcatgtcctagcc 727  Q
    |||||||||| || ||||||||||||| || ||| ||||||||| || |||||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  20643289 tagtttgatgcaatgttttcacatcttgtgctatcgatgatgtcgttacaagccatgtcttgagaggtgcaatgagtttgaaagatatcatatcctagcc 20643190  T
Q  728 atggttgttttttagctgccattgtttgcaag 759  Q
    |||||| || ||| |||||  |||||||||||    
T  20643189 atggttcttctttggctgctgttgtttgcaag 20643158  T

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Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 54 - 90
Target Start/End: Complemental strand, 21199172 - 21199136
Alignment:
Q  54 tattctagagacttccatattattcttcatcattctc 90  Q
    |||||||||||||||||||||||||||||||||||||    
T  21199172 tattctagagacttccatattattcttcatcattctc 21199136  T

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Target: scaffold1361 (Bit Score: 56; Significance: 9e-23; HSPs: 1)
Name: scaffold1361
Description:

Target: scaffold1361; HSP #1
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 462 - 581
Target Start/End: Complemental strand, 1653 - 1534
Alignment:
Q  462 atccataggaataacatcacgccataacctttctttataattttttctaatggaaaatgaagcaatgttgtgttgagatactcttacctcactatccttg 561  Q
    |||||||| ||||||||||| ||||||  ||||||||||||| || | ||||||||||||   |||   ||||||||||||| |||||||| ||||||||    
T  1653 atccatagaaataacatcacaccataaattttctttataattattgccaatggaaaatgagataatagagtgttgagatacttttacctcattatccttg 1554  T
Q  562 ttgagccattgtagcttgta 581  Q
    ||||||||||| ||||||||    
T  1553 ttgagccattgaagcttgta 1534  T

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Target: scaffold0008 (Bit Score: 50; Significance: 3e-19; HSPs: 3)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 12 - 85
Target Start/End: Complemental strand, 73142 - 73069
Alignment:
Q  12 attattctttagtgttctagagacttccacattattcgttattattctagagacttccatattattcttcatca 85  Q
    ||||||||||||| ||||||||||||||| ||||||| | |  |||||||||||||||||||||||||||||||    
T  73142 attattctttagtcttctagagacttccatattattcttcaccattctagagacttccatattattcttcatca 73069  T

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Target: scaffold0008; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 31 - 89
Target Start/End: Complemental strand, 73153 - 73095
Alignment:
Q  31 gagacttccacattattcgttattattctagagacttccatattattcttcatcattct 89  Q
    |||||||| | ||||||| ||| | ||||||||||||||||||||||||||| ||||||    
T  73153 gagacttctatattattctttagtcttctagagacttccatattattcttcaccattct 73095  T

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Target: scaffold0008; HSP #3
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 353 - 487
Target Start/End: Complemental strand, 90234 - 90100
Alignment:
Q  353 ccaacttgatgttaatcccatctttcacaaaagtgtagatgttggcataaccatcatataatgcatgatgatcatatttccaaggcctcttaagaaaaag 452  Q
    |||||||||| |||   |||||||||||||| |||||  ||||||||| ||| || ||||  |||||| ||||||||| |||||| |||  |||||  ||    
T  90234 ccaacttgatcttagcaccatctttcacaaaggtgtaagtgttggcatgaccgtcgtatatggcatgacgatcatattgccaaggtctcccaagaagcag 90135  T
Q  453 gtggcaaacatccataggaataacatcacgccata 487  Q
    ||| ||| ||||||| || || ||||||| |||||    
T  90134 gtgacaagcatccatggggatgacatcacaccata 90100  T

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