View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16024_low_2 (Length: 534)

Name: NF16024_low_2
Description: NF16024
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16024_low_2
NF16024_low_2
[»] chr6 (41 HSPs)
chr6 (9-513)||(33605576-33606081)
chr6 (372-475)||(6071095-6071200)
chr6 (308-466)||(29518818-29518979)
chr6 (323-466)||(10074090-10074235)
chr6 (372-480)||(8481890-8481999)
chr6 (400-515)||(33605647-33605762)
chr6 (304-466)||(10073715-10073877)
chr6 (372-466)||(10074462-10074556)
chr6 (163-336)||(16107762-16107943)
chr6 (313-466)||(2579204-2579365)
chr6 (314-434)||(16107966-16108090)
chr6 (323-466)||(2975466-2975611)
chr6 (78-152)||(6071123-6071197)
chr6 (312-466)||(2578542-2578709)
chr6 (398-466)||(12092581-12092649)
chr6 (163-339)||(29518587-29518768)
chr6 (377-466)||(2378096-2378185)
chr6 (212-336)||(2578730-2578854)
chr6 (207-466)||(16454709-16454966)
chr6 (400-466)||(2579971-2580037)
chr6 (78-152)||(8481918-8481991)
chr6 (375-434)||(3409627-3409687)
chr6 (389-481)||(31715026-31715117)
chr6 (405-480)||(12071776-12071851)
chr6 (475-516)||(2578876-2578917)
chr6 (163-204)||(10074024-10074065)
chr6 (420-457)||(31714683-31714720)
chr6 (99-204)||(31715056-31715160)
chr6 (383-435)||(2578964-2579016)
chr6 (379-435)||(2579622-2579678)
chr6 (410-466)||(3058229-3058285)
chr6 (475-515)||(3409335-3409375)
chr6 (246-302)||(3409459-3409515)
chr6 (410-466)||(5832125-5832181)
chr6 (259-339)||(10074256-10074336)
chr6 (400-480)||(12085119-12085198)
chr6 (80-152)||(12092575-12092647)
chr6 (410-466)||(14748437-14748493)
chr6 (410-466)||(26544052-26544108)
chr6 (410-466)||(29518506-29518562)
chr6 (410-466)||(32741182-32741238)
[»] chr1 (60 HSPs)
chr1 (246-466)||(22077594-22077815)
chr1 (307-461)||(47379889-47380044)
chr1 (307-444)||(22077243-22077381)
chr1 (312-434)||(41157276-41157402)
chr1 (163-337)||(34364591-34364771)
chr1 (308-466)||(66186-66349)
chr1 (343-466)||(24448212-24448336)
chr1 (312-435)||(37556011-37556139)
chr1 (80-335)||(22077392-22077660)
chr1 (324-466)||(3537246-3537393)
chr1 (320-515)||(26661564-26661773)
chr1 (163-327)||(66377-66546)
chr1 (328-466)||(30630737-30630877)
chr1 (398-462)||(19283558-19283622)
chr1 (324-458)||(44290565-44290703)
chr1 (400-466)||(22793271-22793337)
chr1 (316-466)||(34364829-34364984)
chr1 (400-480)||(1188673-1188753)
chr1 (390-466)||(50469180-50469256)
chr1 (82-157)||(1187452-1187527)
chr1 (77-152)||(22793268-22793343)
chr1 (312-355)||(34649721-34649764)
chr1 (316-393)||(41184198-41184277)
chr1 (324-466)||(48588587-48588733)
chr1 (400-466)||(37850699-37850765)
chr1 (400-515)||(39066242-39066365)
chr1 (402-466)||(1187463-1187527)
chr1 (333-409)||(1188387-1188463)
chr1 (80-156)||(1188677-1188753)
chr1 (163-206)||(17294661-17294704)
chr1 (163-206)||(34365009-34365052)
chr1 (207-302)||(44290753-44290848)
chr1 (400-466)||(66571-66637)
chr1 (163-294)||(9955993-9956129)
chr1 (400-466)||(17294570-17294636)
chr1 (400-458)||(24600421-24600479)
chr1 (400-466)||(41184524-41184590)
chr1 (79-152)||(50556443-50556516)
chr1 (80-152)||(19283548-19283620)
chr1 (475-515)||(32594758-32594798)
chr1 (372-435)||(50051781-50051845)
chr1 (163-202)||(26661557-26661596)
chr1 (79-146)||(41184524-41184591)
chr1 (399-446)||(44685448-44685495)
chr1 (381-435)||(11977251-11977308)
chr1 (163-197)||(11977364-11977398)
chr1 (400-466)||(24132084-24132150)
chr1 (400-466)||(34364500-34364566)
chr1 (246-339)||(34649611-34649704)
chr1 (400-466)||(41142365-41142431)
chr1 (163-205)||(41759567-41759609)
chr1 (281-338)||(1188505-1188562)
chr1 (163-301)||(31767093-31767235)
chr1 (157-197)||(14318945-14318985)
chr1 (400-456)||(21378150-21378206)
chr1 (410-466)||(34649441-34649497)
chr1 (410-466)||(38804454-38804510)
chr1 (410-466)||(44290924-44290980)
chr1 (90-138)||(47379892-47379940)
chr1 (479-515)||(50052065-50052101)
[»] chr8 (53 HSPs)
chr8 (312-466)||(40518485-40518641)
chr8 (165-458)||(18371763-18372066)
chr8 (304-435)||(45122898-45123034)
chr8 (235-434)||(30359434-30359636)
chr8 (311-466)||(9482703-9482857)
chr8 (289-435)||(18372501-18372652)
chr8 (314-466)||(8918863-8919019)
chr8 (374-466)||(4154379-4154473)
chr8 (399-466)||(4154765-4154832)
chr8 (364-466)||(18372355-18372458)
chr8 (246-466)||(34835047-34835268)
chr8 (312-434)||(147734-147856)
chr8 (364-515)||(9309309-9309471)
chr8 (312-396)||(3038099-3038185)
chr8 (400-466)||(9620387-9620453)
chr8 (400-466)||(41972151-41972217)
chr8 (376-456)||(6731872-6731953)
chr8 (324-435)||(1014001-1014116)
chr8 (163-340)||(3669771-3669952)
chr8 (78-146)||(9620387-9620455)
chr8 (289-466)||(18372798-18372980)
chr8 (400-464)||(20995502-20995566)
chr8 (372-466)||(3670024-3670119)
chr8 (235-321)||(18372194-18372279)
chr8 (77-198)||(4154320-4154448)
chr8 (80-146)||(4154765-4154831)
chr8 (400-466)||(9608738-9608804)
chr8 (80-144)||(20995502-20995566)
chr8 (80-160)||(33831971-33832051)
chr8 (475-515)||(45122099-45122139)
chr8 (155-202)||(3670136-3670183)
chr8 (400-466)||(147444-147510)
chr8 (79-197)||(147821-147938)
chr8 (400-466)||(3038389-3038455)
chr8 (400-466)||(33831971-33832037)
chr8 (405-466)||(45122009-45122070)
chr8 (163-339)||(1014138-1014319)
chr8 (364-466)||(18373030-18373134)
chr8 (400-466)||(6876961-6877028)
chr8 (372-431)||(34835436-34835498)
chr8 (372-431)||(34835702-34835764)
chr8 (478-516)||(9483228-9483266)
chr8 (400-466)||(9620775-9620841)
chr8 (80-138)||(41972151-41972209)
chr8 (80-157)||(9620764-9620841)
chr8 (429-466)||(34219232-34219269)
chr8 (475-515)||(3669763-3669803)
chr8 (402-466)||(5274770-5274834)
chr8 (475-515)||(5915943-5915983)
chr8 (475-515)||(34834952-34834992)
chr8 (438-466)||(40417618-40417646)
chr8 (410-466)||(40991756-40991812)
chr8 (402-466)||(45122156-45122220)
[»] chr3 (48 HSPs)
chr3 (79-466)||(37990738-37991143)
chr3 (236-439)||(15773017-15773224)
chr3 (304-466)||(21832442-21832605)
chr3 (281-446)||(9240020-9240188)
chr3 (324-466)||(22304482-22304628)
chr3 (312-466)||(54017915-54018074)
chr3 (372-459)||(22304210-22304298)
chr3 (402-466)||(39336328-39336392)
chr3 (400-515)||(31190010-31190125)
chr3 (338-438)||(32462686-32462791)
chr3 (400-466)||(12114661-12114727)
chr3 (400-466)||(46546424-46546490)
chr3 (388-466)||(47964617-47964695)
chr3 (372-457)||(2299939-2300026)
chr3 (207-302)||(22304327-22304423)
chr3 (412-500)||(36986013-36986101)
chr3 (412-500)||(37011452-37011540)
chr3 (403-466)||(7767413-7767476)
chr3 (312-355)||(8328176-8328219)
chr3 (79-202)||(31190009-31190132)
chr3 (80-146)||(46546424-46546490)
chr3 (312-466)||(3135172-3135330)
chr3 (400-464)||(33809109-33809173)
chr3 (400-464)||(54451277-54451341)
chr3 (312-408)||(8328281-8328378)
chr3 (400-447)||(12747870-12747917)
chr3 (400-466)||(29645001-29645067)
chr3 (82-152)||(39336322-39336392)
chr3 (400-466)||(45395752-45395818)
chr3 (255-339)||(22303847-22303931)
chr3 (80-152)||(47965008-47965080)
chr3 (163-202)||(39336005-39336044)
chr3 (346-435)||(4823593-4823683)
chr3 (80-138)||(21832450-21832508)
chr3 (400-466)||(33175763-33175829)
chr3 (400-466)||(35946515-35946581)
chr3 (478-516)||(39389149-39389187)
chr3 (400-466)||(39914245-39914311)
chr3 (400-458)||(47965022-47965080)
chr3 (164-202)||(50612482-50612520)
chr3 (403-444)||(1634436-1634477)
chr3 (233-302)||(3135033-3135100)
chr3 (78-127)||(12747870-12747919)
chr3 (373-434)||(22304079-22304143)
chr3 (372-405)||(42342253-42342286)
chr3 (483-515)||(12114604-12114636)
chr3 (402-466)||(29644680-29644744)
chr3 (475-515)||(43346833-43346873)
[»] chr2 (57 HSPs)
chr2 (311-466)||(28531413-28531568)
chr2 (312-515)||(7598511-7598717)
chr2 (304-466)||(42514908-42515075)
chr2 (313-464)||(36785664-36785819)
chr2 (277-466)||(38796317-38796513)
chr2 (304-466)||(40679728-40679887)
chr2 (207-401)||(35580552-35580748)
chr2 (367-466)||(33561550-33561649)
chr2 (371-466)||(29873636-29873733)
chr2 (372-463)||(30323427-30323520)
chr2 (388-466)||(33953870-33953948)
chr2 (372-466)||(41678466-41678562)
chr2 (339-466)||(5542724-5542854)
chr2 (312-433)||(3672984-3673111)
chr2 (372-461)||(30313141-30313232)
chr2 (418-469)||(29874119-29874170)
chr2 (376-466)||(37106156-37106247)
chr2 (342-439)||(40733813-40733915)
chr2 (400-466)||(962591-962657)
chr2 (376-446)||(37894811-37894881)
chr2 (312-468)||(6422018-6422171)
chr2 (246-466)||(36178368-36178592)
chr2 (402-466)||(3594277-3594341)
chr2 (78-138)||(30313169-30313229)
chr2 (400-480)||(33954346-33954426)
chr2 (257-339)||(7598411-7598493)
chr2 (364-465)||(29676857-29676961)
chr2 (365-466)||(40733472-40733576)
chr2 (400-477)||(12910221-12910298)
chr2 (80-157)||(33561539-33561616)
chr2 (403-466)||(30312785-30312848)
chr2 (410-466)||(37105927-37105983)
chr2 (418-466)||(40163472-40163520)
chr2 (400-444)||(43443103-43443147)
chr2 (98-149)||(29874119-29874170)
chr2 (155-206)||(33731724-33731775)
chr2 (400-443)||(36006001-36006044)
chr2 (399-466)||(42514641-42514708)
chr2 (155-197)||(6421807-6421849)
chr2 (84-198)||(7598606-7598720)
chr2 (400-466)||(16542442-16542508)
chr2 (400-458)||(28254344-28254402)
chr2 (78-160)||(30323455-30323537)
chr2 (364-429)||(40734232-40734300)
chr2 (80-157)||(962591-962668)
chr2 (105-146)||(13154480-13154521)
chr2 (246-339)||(29676700-29676793)
chr2 (80-157)||(33953859-33953936)
chr2 (438-466)||(2336655-2336683)
chr2 (82-146)||(3594277-3594341)
chr2 (410-466)||(6421388-6421444)
chr2 (438-466)||(13154480-13154508)
chr2 (400-444)||(16590881-16590925)
chr2 (78-146)||(29873636-29873704)
chr2 (389-456)||(31468855-31468925)
chr2 (410-466)||(36178704-36178760)
chr2 (80-157)||(41678455-41678534)
[»] chr7 (53 HSPs)
chr7 (246-466)||(37345753-37345977)
chr7 (313-466)||(7553926-7554084)
chr7 (236-355)||(8128317-8128436)
chr7 (307-434)||(40094525-40094653)
chr7 (210-466)||(30245292-30245553)
chr7 (312-466)||(45434536-45434695)
chr7 (163-339)||(37533257-37533438)
chr7 (320-466)||(22566761-22566912)
chr7 (329-466)||(30244618-30244760)
chr7 (312-405)||(48243240-48243335)
chr7 (415-466)||(10341840-10341891)
chr7 (339-459)||(14681438-14681562)
chr7 (79-302)||(1085546-1085782)
chr7 (400-459)||(118407-118466)
chr7 (312-355)||(47129376-47129419)
chr7 (400-466)||(1085715-1085781)
chr7 (400-466)||(24838801-24838867)
chr7 (97-146)||(10341842-10341891)
chr7 (346-466)||(37533109-37533230)
chr7 (379-466)||(30255308-30255398)
chr7 (402-446)||(40230410-40230454)
chr7 (211-337)||(22566932-22567059)
chr7 (312-426)||(45697815-45697929)
chr7 (400-466)||(7517573-7517639)
chr7 (257-339)||(28300471-28300552)
chr7 (376-466)||(30244236-30244329)
chr7 (376-515)||(30245043-30245193)
chr7 (400-466)||(36534883-36534949)
chr7 (399-453)||(37345553-37345607)
chr7 (255-309)||(40094691-40094744)
chr7 (400-466)||(41910693-41910759)
chr7 (400-465)||(8128541-8128606)
chr7 (246-339)||(37532904-37532997)
chr7 (312-352)||(1085469-1085509)
chr7 (475-515)||(9901719-9901759)
chr7 (163-202)||(7554109-7554148)
chr7 (399-446)||(28301662-28301709)
chr7 (155-197)||(23417-23459)
chr7 (379-466)||(10342230-10342313)
chr7 (80-126)||(28301662-28301708)
chr7 (79-161)||(30244693-30244775)
chr7 (164-202)||(34218069-34218107)
chr7 (400-515)||(34218076-34218199)
chr7 (400-466)||(40094873-40094939)
chr7 (400-466)||(43241488-43241554)
chr7 (163-197)||(45434720-45434754)
chr7 (478-515)||(14681589-14681626)
chr7 (163-196)||(23569043-23569076)
chr7 (475-515)||(30253568-30253608)
chr7 (402-466)||(36622955-36623019)
chr7 (117-157)||(37345948-37345988)
chr7 (484-516)||(37533405-37533437)
chr7 (438-466)||(42282117-42282145)
[»] chr5 (42 HSPs)
chr5 (304-435)||(13785739-13785872)
chr5 (280-466)||(3295114-3295306)
chr5 (372-480)||(31509586-31509696)
chr5 (366-460)||(36522001-36522095)
chr5 (314-458)||(38427461-38427599)
chr5 (365-515)||(36522279-36522437)
chr5 (372-445)||(24489324-24489397)
chr5 (312-466)||(13415859-13416017)
chr5 (381-459)||(26074252-26074330)
chr5 (78-152)||(31509614-31509688)
chr5 (398-466)||(41632773-41632841)
chr5 (335-466)||(26074535-26074671)
chr5 (372-459)||(26074888-26074978)
chr5 (78-152)||(9510613-9510687)
chr5 (80-157)||(36522325-36522402)
chr5 (400-476)||(36568656-36568732)
chr5 (399-466)||(1028616-1028683)
chr5 (207-309)||(25328069-25328171)
chr5 (312-466)||(624099-624255)
chr5 (400-455)||(9510630-9510685)
chr5 (421-480)||(31509745-31509804)
chr5 (163-339)||(32487477-32487657)
chr5 (400-466)||(12662751-12662817)
chr5 (149-203)||(13042774-13042828)
chr5 (400-458)||(15370092-15370150)
chr5 (80-138)||(41632775-41632833)
chr5 (163-339)||(9498550-9498728)
chr5 (149-198)||(13112772-13112821)
chr5 (402-466)||(35150002-35150066)
chr5 (376-466)||(6500791-6500881)
chr5 (101-152)||(31509745-31509796)
chr5 (400-439)||(35150740-35150779)
chr5 (400-439)||(35151031-35151070)
chr5 (400-466)||(299482-299548)
chr5 (408-466)||(3622979-3623037)
chr5 (307-361)||(25328209-25328263)
chr5 (400-466)||(34753124-34753190)
chr5 (400-466)||(36492316-36492382)
chr5 (400-449)||(36527199-36527248)
chr5 (80-157)||(36568655-36568732)
chr5 (484-517)||(42405636-42405669)
chr5 (294-330)||(35150229-35150265)
[»] chr4 (62 HSPs)
chr4 (308-466)||(54108814-54108972)
chr4 (313-466)||(2740973-2741130)
chr4 (312-466)||(20826120-20826276)
chr4 (320-466)||(44620568-44620719)
chr4 (312-405)||(16889314-16889410)
chr4 (313-466)||(44621327-44621485)
chr4 (372-515)||(36629202-36629353)
chr4 (308-466)||(49076545-49076710)
chr4 (399-466)||(28034221-28034288)
chr4 (312-434)||(39404304-39404425)
chr4 (324-458)||(3244556-3244692)
chr4 (235-335)||(45496712-45496812)
chr4 (400-466)||(2740693-2740759)
chr4 (400-466)||(12197371-12197437)
chr4 (400-466)||(34544097-34544165)
chr4 (163-340)||(10246003-10246186)
chr4 (80-152)||(28034222-28034294)
chr4 (400-515)||(3700358-3700473)
chr4 (312-355)||(22028198-22028241)
chr4 (77-157)||(34544094-34544176)
chr4 (255-337)||(44621180-44621263)
chr4 (412-466)||(760194-760248)
chr4 (255-309)||(2740872-2740925)
chr4 (80-138)||(3244556-3244614)
chr4 (365-466)||(3341083-3341187)
chr4 (400-466)||(52884688-52884754)
chr4 (400-466)||(52884880-52884946)
chr4 (400-466)||(54741275-54741341)
chr4 (421-462)||(15841469-15841510)
chr4 (405-458)||(49302902-49302955)
chr4 (101-198)||(15841405-15841510)
chr4 (410-466)||(16888913-16888969)
chr4 (155-195)||(18879882-18879922)
chr4 (163-339)||(20825920-20826103)
chr4 (475-515)||(45496881-45496921)
chr4 (158-205)||(22027991-22028038)
chr4 (311-361)||(23817503-23817554)
chr4 (312-355)||(43174426-43174469)
chr4 (96-202)||(54343041-54343148)
chr4 (400-466)||(10245913-10245979)
chr4 (400-466)||(11348425-11348491)
chr4 (400-466)||(36572012-36572078)
chr4 (400-466)||(39792957-39793023)
chr4 (410-460)||(50788086-50788136)
chr4 (163-205)||(54017625-54017667)
chr4 (80-138)||(54741283-54741341)
chr4 (155-204)||(3271863-3271911)
chr4 (405-466)||(23556963-23557024)
chr4 (85-146)||(23556963-23557024)
chr4 (478-515)||(36608701-36608738)
chr4 (165-330)||(39404104-39404275)
chr4 (478-515)||(50002505-50002542)
chr4 (80-160)||(2740693-2740773)
chr4 (90-138)||(7147746-7147794)
chr4 (204-264)||(11783519-11783578)
chr4 (475-515)||(22028409-22028449)
chr4 (475-515)||(23817721-23817761)
chr4 (475-515)||(34646689-34646729)
chr4 (410-466)||(39404021-39404077)
chr4 (475-515)||(39792900-39792940)
chr4 (475-511)||(44621078-44621114)
chr4 (410-466)||(49880163-49880219)
[»] scaffold0391 (3 HSPs)
scaffold0391 (312-466)||(1205-1364)
scaffold0391 (312-458)||(3092-3244)
scaffold0391 (256-337)||(1383-1465)
[»] scaffold0734 (2 HSPs)
scaffold0734 (313-466)||(5678-5836)
scaffold0734 (400-466)||(5389-5455)
[»] scaffold0113 (3 HSPs)
scaffold0113 (372-475)||(39802-39906)
scaffold0113 (77-152)||(39828-39903)
scaffold0113 (410-466)||(39460-39515)
[»] scaffold0078 (2 HSPs)
scaffold0078 (339-466)||(5284-5416)
scaffold0078 (163-206)||(5066-5109)
[»] scaffold0702 (1 HSPs)
scaffold0702 (377-466)||(241-330)
[»] scaffold0171 (1 HSPs)
scaffold0171 (376-459)||(17562-17648)


Alignment Details
Target: chr6 (Bit Score: 390; Significance: 0; HSPs: 41)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 390; E-Value: 0
Query Start/End: Original strand, 9 - 513
Target Start/End: Original strand, 33605576 - 33606081
Alignment:
Q  9 tgctttaatccataatcagcattagagcatgcataatatatattgtaaccaaggcatgtaactcattcaattgttgtgtgtaagtgtcagttatatgtct 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||| || |||||||||    
T  33605576 tgctttaatccataatcagcattagagcatgcataatatatattgtaacccaggcatgtaactcattcaattgttgtgtgcaagtgtgagctatatgtct 33605675  T
Q  109 cacattgtatagaaaagtggaggttgaacaatttataattgagaagacctatttccttaaggttttgggtaagtgtgtgatgtctctctcgcttatgctc 208  Q
    |||||   |||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||| | ||||||||||||||||||    
T  33605676 cacatcagatagaaaagtggaggttgaacactttataattgagaagacctatttccttaaagttttgggtaagtgtgtggtatctctctcgcttatgctc 33605775  T
Q  209 tagcctcaatgtgggtggtcaccctggctcccctcaatgacacaatagtggtatcagagccctgctacgacgaagggtaggaccgaggcagccgatccgt 308  Q
    |||||||||||||||| |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  33605776 tagcctcaatgtgggttgtcaccctggctcccctcaatgacacaacagtggtattagagccctgctacgacgaagggtaggaccgaggcagccgatccgt 33605875  T
Q  309 tgtggagaaaccagcaacgacgatacaagcaagtaagagcttccgctcgaggga-ggcacgattaattgatggactcacatttgagggggagtgttgtgt 407  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||| | | |||||| | |||||||||||||||| ||||||||||||| |||||    
T  33605876 tgcggagaaaccagcaacgacgatacaagcaagtaagagcttccgctcgaagaagggcacggtgaattgatggactcacacttgagggggagtgatgtgt 33605975  T
Q  408 gtaagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataattgacatgactcattttcttaaggtttcgggtaagagtgtg 507  Q
    | || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| | ||    
T  33605976 gcaaatgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataattgacatgactcattgtcttaaggtttcaggtaagattttg 33606075  T
Q  508 gtgtct 513  Q
    ||||||    
T  33606076 gtgtct 33606081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 372 - 475
Target Start/End: Original strand, 6071095 - 6071200
Alignment:
Q  372 aattgatggactcacatttgagggggag--tgttgtgtgtaagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataattg 469  Q
    ||||||||||||||||||||||||| ||  ||||||||| |||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| ||    
T  6071095 aattgatggactcacatttgaggggaagattgttgtgtgcaagtgtgagttatatgtcccacattgaatagaaaagtggaggttgaacactttataagtg 6071194  T
Q  470 acatga 475  Q
    | ||||    
T  6071195 agatga 6071200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 308 - 466
Target Start/End: Original strand, 29518818 - 29518979
Alignment:
Q  308 ttgtggagaaaccagcaacgacgatacaagcaa-gtaagagcttccgctcgagggag-gcacgattaattgatggactcacatttgagggggagtgtt-g 404  Q
    ||||||||||||||||||||  || ||| |||| ||||||||||||||| ||||| | ||||||| |||||||||||||||| ||||||||||||||| |    
T  29518818 ttgtggagaaaccagcaacggagacacatgcaaagtaagagcttccgcttgagggggagcacgatgaattgatggactcacacttgagggggagtgttgg 29518917  T
Q  405 tgtgtaagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataa 466  Q
    | || |||||| ||||||||||||||||||| ||| || |||  ||||||||||| ||||||    
T  29518918 tttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataa 29518979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 323 - 466
Target Start/End: Complemental strand, 10074235 - 10074090
Alignment:
Q  323 caacgacgatacaagcaagtaagagcttccgctcgagggagg--cacgattaattgatggactcacatttgagggggagtgttgtgtgtaagtgtaagtt 420  Q
    ||||| ||||||||||||||||||||||||||| || || ||  || ||| ||||||| ||||| || |||||||||||||||||||| ||| || ||||    
T  10074235 caacggcgatacaagcaagtaagagcttccgcttgaagggggagcatgatgaattgatagactcgcacttgagggggagtgttgtgtgcaagggtgagtt 10074136  T
Q  421 atatgtcccacatcgaatagaaaagtggaggttgaacactttataa 466  Q
    |||| |||||||||| ||||||||||  | ||||||||| ||||||    
T  10074135 atatatcccacatcggatagaaaagtaaacgttgaacaccttataa 10074090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 372 - 480
Target Start/End: Original strand, 8481890 - 8481999
Alignment:
Q  372 aattgatggactcacatttgagggggag--tgttgtgtgtaagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataattg 469  Q
    |||||||||||||||| |||||||||||  ||||||||| |||||| |||||||||||| |||||  ||| |||||||||||||||||||||||||| ||    
T  8481890 aattgatggactcacacttgagggggagattgttgtgtgcaagtgtgagttatatgtcc-acatcagatataaaagtggaggttgaacactttataaatg 8481988  T
Q  470 acatgactcat 480  Q
    | |||||||||    
T  8481989 agatgactcat 8481999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 400 - 515
Target Start/End: Original strand, 33605647 - 33605762
Alignment:
Q  400 tgttgtgtgtaagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataattgacatgactcattttcttaaggtttcgggta 499  Q
    ||||||||| |||||| || |||||||| ||||||  |||||||||||||||||||||||||||||||||| | |||  |||| ||||| |||| |||||    
T  33605647 tgttgtgtgcaagtgtgagctatatgtctcacatcagatagaaaagtggaggttgaacactttataattgagaagacctatttccttaaagttttgggta 33605746  T
Q  500 agagtgtggtgtctct 515  Q
    || ||||||| |||||    
T  33605747 agtgtgtggtatctct 33605762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 304 - 466
Target Start/End: Complemental strand, 10073877 - 10073715
Alignment:
Q  304 tccgttgtggagaaaccagcaacgacgatacaagcaagtaagagcttccgctcgagggaggcac--gattaattgatggactcacatttgagggggagtg 401  Q
    ||||||| |||||||||| ||||   |||||||| |||||||| |||||||| || || || ||  ||| |||||||||||||||| || || ||| |||    
T  10073877 tccgttgcggagaaaccatcaacagtgatacaagaaagtaagaccttccgcttgaagggggaacatgatgaattgatggactcacacttaagagggggtg 10073778  T
Q  402 ttgtgtgtaagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataa 466  Q
    ||||||| |||||| |||||||||||||||||||   ||||||||  ||||||||||| ||||||    
T  10073777 ttgtgtgcaagtgttagttatatgtcccacatcg--gagaaaagtaaaggttgaacaccttataa 10073715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 372 - 466
Target Start/End: Complemental strand, 10074556 - 10074462
Alignment:
Q  372 aattgatggactcacatttgagggggagtgttgtgtgtaagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataa 466  Q
    |||||||||||||||| || ||||||||||||||||| |||||| ||||| | ||||||||||| ||||||||||  ||||||||||| ||||||    
T  10074556 aattgatggactcacacttaagggggagtgttgtgtgcaagtgtgagttagaggtcccacatcggatagaaaagtaaaggttgaacaccttataa 10074462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 163 - 336
Target Start/End: Original strand, 16107762 - 16107943
Alignment:
Q  163 ccttaaggttttgggtaagtgtgtgatgtctctctcgcttatgc------tctagcctcaatgtgggtggtcaccctggctcccct-caatgacacaata 255  Q
    ||||||||||||||||||| ||||| ||||||||| |||| |||      ||||||||| |||||||||||  ||||  ||||||| || |||| ||| |    
T  16107762 ccttaaggttttgggtaagagtgtggtgtctctcttgcttgtgcggttgctctagcctcgatgtgggtggtacccctaactccccttcagtgacccaaca 16107861  T
Q  256 gtggtatcagagccctgctacgacgaagggtaggaccgaggcagccgatcc-gttgtggagaaaccagcaacgacgatacaa 336  Q
    ||||||||||||||| | | |||||||||||| |||||||||||||| |||  ||||| ||||| |||||||| || |||||    
T  16107862 gtggtatcagagccccggttcgacgaagggtatgaccgaggcagccggtccatttgtgcagaaagcagcaacggcggtacaa 16107943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 313 - 466
Target Start/End: Complemental strand, 2579365 - 2579204
Alignment:
Q  313 gagaaaccagcaacgacgatacaagcaagtaagagcttccgctcga---gggaggcac--gattaattgatggactcacatttgagggggagtgttgt-g 406  Q
    ||||||||||||||| |||||||| |||||||||||||||||| ||   |||||  ||  ||| ||| |||||||||||| ||||||||||||||||| |    
T  2579365 gagaaaccagcaacggcgatacaaacaagtaagagcttccgcttgaaaggggagcaacatgatgaatagatggactcacacttgagggggagtgttgttg 2579266  T
Q  407 tgta--agtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataa 466  Q
    ||||  ||||| ||||||||||||||||||| ||| || |||  | ||||||||| ||||||    
T  2579265 tgtacaagtgttagttatatgtcccacatcggataaaagagtaaaagttgaacaccttataa 2579204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 314 - 434
Target Start/End: Original strand, 16107966 - 16108090
Alignment:
Q  314 agaaaccagcaacgacgatacaagcaagtaagagcttccgctcg-agggaggcacgattaattgatggactcacatttgagggggagtgttg-tgtgt-- 409  Q
    |||||||||||||| |||| |||| ||||||||||||||||| | ||||  ||| ||| |||||||||||||||| |||||||||||||||| |||||      
T  16107966 agaaaccagcaacggcgatgcaagaaagtaagagcttccgcttgaaggggagcatgatgaattgatggactcacacttgagggggagtgttgttgtgtac 16108065  T
Q  410 aagtgtaagttatatgtcccacatc 434  Q
    |||||| |||||||||| |||||||    
T  16108066 aagtgtgagttatatgttccacatc 16108090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 323 - 466
Target Start/End: Original strand, 2975466 - 2975611
Alignment:
Q  323 caacgacgatacaagcaagtaagagcttccgctcgagggaggcac--gattaattgatggactcacatttgagggggagtgttgtgtgtaagtgtaagtt 420  Q
    |||||||||||| ||||||||||||||||||||  | || || ||  ||| ||| |||| ||||||| ||| ||||||||||||||| |||||||||||     
T  2975466 caacgacgatacgagcaagtaagagcttccgcttaaagggggaacatgatgaatagatgcactcacacttg-gggggagtgttgtgtttaagtgtaagta 2975564  T
Q  421 at-atgtcccacatcgaatagaaaagtggaggttgaacactttataa 466  Q
    || |||||||||||| |||||||||||  | ||||||||| ||||||    
T  2975565 attatgtcccacatcaaatagaaaagtaaatgttgaacaccttataa 2975611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 78 - 152
Target Start/End: Original strand, 6071123 - 6071197
Alignment:
Q  78 attgttgtgtgtaagtgtcagttatatgtctcacattgtatagaaaagtggaggttgaacaatttataattgaga 152  Q
    ||||||||||| |||||| ||||||||||| ||||||| |||||||||||||||||||||| ||||||| |||||    
T  6071123 attgttgtgtgcaagtgtgagttatatgtcccacattgaatagaaaagtggaggttgaacactttataagtgaga 6071197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 312 - 466
Target Start/End: Complemental strand, 2578709 - 2578542
Alignment:
Q  312 ggagaaaccagcaacgacgatacaagcaagtaagagcttccgct--cg-------agggag--gcacgattaattgatggactcacatttgagggggagt 400  Q
    |||||||||| ||||| |||||||||||||||||||||||||||  ||       ||||||  ||| ||| ||| |||||||||||| ||||||||||||    
T  2578709 ggagaaaccaacaacggcgatacaagcaagtaagagcttccgcttccgcttgaaaagggagcagcatgatgaatagatggactcacacttgagggggagt 2578610  T
Q  401 gttg-tgtgt--aagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataa 466  Q
    |||| |||||  |||||| |||||||||||||||| || ||| || |||  ||||||||||||||||||    
T  2578609 gttgttgtgtacaagtgtgagttatatgtcccaca-cggataaaagagtaaaggttgaacactttataa 2578542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 398 - 466
Target Start/End: Complemental strand, 12092649 - 12092581
Alignment:
Q  398 agtgttgtgtgtaagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataa 466  Q
    ||||||||||| ||| ||  |||| ||||||||||||| ||||||||||||||||||| ||||||||||    
T  12092649 agtgttgtgtgcaagggtgtgttagatgtcccacatcggatagaaaagtggaggttgagcactttataa 12092581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 163 - 339
Target Start/End: Original strand, 29518587 - 29518768
Alignment:
Q  163 ccttaaggttttgggtaagtgtgtgatgtctctctcgcttatgc------tctagcctcaatgtgggtggtcaccctggctcccctcaatgacacaatag 256  Q
    ||||||||||||||||||| ||||| ||||||||| |||| |||      ||||||||| ||||||  |||| |||  ||||| |||| | || ||| ||    
T  29518587 ccttaaggttttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcctctca-taacccaacag 29518685  T
Q  257 tggtatcagagccctgctacgacgaagggtaggaccgaggcagccgatccgttgtggagaaaccagcaacgacgatacaagca 339  Q
    |||||||||||||| | | |||||||||||  ||||||| | |||| |  |||| | ||||| ||||||||||| ||||||||    
T  29518686 tggtatcagagccccggttcgacgaagggtgcgaccgagaccgccggttagttgcgcagaaagcagcaacgacggtacaagca 29518768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 377 - 466
Target Start/End: Original strand, 2378096 - 2378185
Alignment:
Q  377 atggactcacatttgagggggagtgttg-tgtgtaagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataa 466  Q
    ||||||||||||||| |||||||||||| | || |||||| ||||||||||||||||||| ||| || |||  ||||||||||| ||||||    
T  2378096 atggactcacatttg-gggggagtgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataa 2378185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 212 - 336
Target Start/End: Complemental strand, 2578854 - 2578730
Alignment:
Q  212 cctcaatgtgggtggtcaccctggctcccctcaatgacacaatagtggtatcagagccctgctacgacgaagggtaggaccgaggcagccgatccg-ttg 310  Q
    |||| ||||||  |||| ||| ||||||||||| |||  ||| |||||||||||||||| | | |||||||||||| |||||||||||||| |||| |||    
T  2578854 cctcgatgtggacggtcccccaggctcccctca-tgaatcaacagtggtatcagagccccggttcgacgaagggtacgaccgaggcagccggtccgcttg 2578756  T
Q  311 tggagaaaccagcaacgacgatacaa 336  Q
     | ||||| |||||||| || |||||    
T  2578755 ggcagaaagcagcaacggcgttacaa 2578730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 207 - 466
Target Start/End: Original strand, 16454709 - 16454966
Alignment:
Q  207 tctagcctcaatgtgggtggtcaccctggctcccctcaatgacacaatagtggtatcagagccctgctacgacgaagggtaggaccgaggcagccgatcc 306  Q
    ||||||||| ||||||  |||| |||  |||||||||  |||| ||| |||||||||||||||| | | |||||||||||| |||||||| | ||| |||    
T  16454709 tctagcctcgatgtggacggtcccccgagctcccctcg-tgacccaacagtggtatcagagcccaggttcgacgaagggtacgaccgaggtaaccggtcc 16454807  T
Q  307 g-ttgtggagaaaccagcaacgacgatacaagcaagtaagagcttccgctcga--gggaggcacgattaattgatggactcacatttgagggggagtgtt 403  Q
    | ||| | ||||| || |||||||| ||||       ||||||||||||| ||  |||  ||| | | |||||||||| ||||| |||||||||||||||    
T  16454808 gtttgcgcagaaagcaacaacgacggtaca-------aagagcttccgcttgaagggggagcatgctgaattgatggagtcacagttgagggggagtgtt 16454900  T
Q  404 g-tgtgt--aagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataa 466  Q
    | |||||  || ||| |||||| |||||||||||  ||| || |||  ||||||||||| ||||||    
T  16454901 gttgtgtacaaatgtgagttatgtgtcccacatcagataaaagagtaaaggttgaacaccttataa 16454966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 400 - 466
Target Start/End: Complemental strand, 2580037 - 2579971
Alignment:
Q  400 tgttgtgtgtaagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataa 466  Q
    ||||||||| |||||| ||||||||||||||||||| ||| || |||  ||||||||||| ||||||    
T  2580037 tgttgtgtgcaagtgtgagttatatgtcccacatcggataaaagagtaaaggttgaacacattataa 2579971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 78 - 152
Target Start/End: Original strand, 8481918 - 8481991
Alignment:
Q  78 attgttgtgtgtaagtgtcagttatatgtctcacattgtatagaaaagtggaggttgaacaatttataattgaga 152  Q
    ||||||||||| |||||| ||||||||||| |||||   ||| |||||||||||||||||| ||||||| |||||    
T  8481918 attgttgtgtgcaagtgtgagttatatgtc-cacatcagatataaaagtggaggttgaacactttataaatgaga 8481991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 375 - 434
Target Start/End: Original strand, 3409627 - 3409687
Alignment:
Q  375 tgatggactcacatttgagggggagtgtt-gtgtgtaagtgtaagttatatgtcccacatc 434  Q
    ||||||||||||| ||||||||||||||| || || |||||| |||||||||| |||||||    
T  3409627 tgatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtaccacatc 3409687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 389 - 481
Target Start/End: Original strand, 31715026 - 31715117
Alignment:
Q  389 ttgagggggagtgttgtgtgtaagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataattgacatgactcatt 481  Q
    ||||||| ||||||| |||| ||| ||   ||||||||| |||||||| ||||||||||||| ||||||| | ||||| ||| ||||||||||    
T  31715026 ttgagggagagtgttttgtgcaagagtggattatatgtctcacatcga-tagaaaagtggagattgaacattatataagtgaaatgactcatt 31715117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 405 - 480
Target Start/End: Complemental strand, 12071851 - 12071776
Alignment:
Q  405 tgtgtaagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataattgacatgactcat 480  Q
    |||| |||||| ||||||||||| | ||||  |||||||| ||||| |||||||||||||||| || | |||||||    
T  12071851 tgtgcaagtgtgagttatatgtctcgcatcagatagaaaaatggagtttgaacactttataatagaaaggactcat 12071776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 475 - 516
Target Start/End: Complemental strand, 2578917 - 2578876
Alignment:
Q  475 actcattttcttaaggtttcgggtaagagtgtggtgtctctt 516  Q
    |||||||  |||||||||| ||||||||||||||||||||||    
T  2578917 actcattaccttaaggttttgggtaagagtgtggtgtctctt 2578876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 163 - 204
Target Start/End: Complemental strand, 10074065 - 10074024
Alignment:
Q  163 ccttaaggttttgggtaagtgtgtgatgtctctctcgcttat 204  Q
    ||||||||||||||||||  ||||| ||||||||||||||||    
T  10074065 ccttaaggttttgggtaaaagtgtggtgtctctctcgcttat 10074024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 420 - 457
Target Start/End: Original strand, 31714683 - 31714720
Alignment:
Q  420 tatatgtcccacatcgaatagaaaagtggaggttgaac 457  Q
    ||||||||| |||||| |||||||||||||||||||||    
T  31714683 tatatgtcctacatcggatagaaaagtggaggttgaac 31714720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 99 - 204
Target Start/End: Original strand, 31715056 - 31715160
Alignment:
Q  99 ttatatgtctcacattgtatagaaaagtggaggttgaacaatttataattgagaagacctatttccttaaggttttgggtaagtgtgtgatgtctctctc 198  Q
    ||||||||||||||| | |||||||||||||| ||||||| | ||||| ||| | |||  ||| || |||  |||||  |||| ||||||| ||||||||    
T  31715056 ttatatgtctcacatcg-atagaaaagtggagattgaacattatataagtgaaatgactcattaccataaaattttgattaagagtgtgatatctctctc 31715154  T
Q  199 gcttat 204  Q
    ||||||    
T  31715155 gcttat 31715160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 383 - 435
Target Start/End: Complemental strand, 2579016 - 2578964
Alignment:
Q  383 tcacatttgagggggagtgttgtgtgtaagtgtaagttatatgtcccacatcg 435  Q
    ||||| |||||||||||||||||| | |||||| | ||||||||||| |||||    
T  2579016 tcacacttgagggggagtgttgtgagcaagtgtgatttatatgtccctcatcg 2578964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 379 - 435
Target Start/End: Complemental strand, 2579678 - 2579622
Alignment:
Q  379 ggactcacatttgagggggagtgttgtgtgtaagtgtaagttatatgtcccacatcg 435  Q
    ||||||||| ||||||| |||||||||  | | |||| |||||||||||||||||||    
T  2579678 ggactcacacttgagggagagtgttgttagcaggtgtgagttatatgtcccacatcg 2579622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 410 - 466
Target Start/End: Original strand, 3058229 - 3058285
Alignment:
Q  410 aagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataa 466  Q
    |||||| ||||||||||||||||||| ||| || |||  ||||||||||| ||||||    
T  3058229 aagtgttagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataa 3058285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 475 - 515
Target Start/End: Original strand, 3409335 - 3409375
Alignment:
Q  475 actcattttcttaaggtttcgggtaagagtgtggtgtctct 515  Q
    |||||||  |||||||||| |||||||||||||||||||||    
T  3409335 actcattgccttaaggttttgggtaagagtgtggtgtctct 3409375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 246 - 302
Target Start/End: Original strand, 3409459 - 3409515
Alignment:
Q  246 tgacacaatagtggtatcagagccctgctacgacgaagggtaggaccgaggcagccg 302  Q
    |||| |||||||||||||||||||| | | ||||||||  || ||||||||||||||    
T  3409459 tgacccaatagtggtatcagagccccggttcgacgaagtatatgaccgaggcagccg 3409515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 410 - 466
Target Start/End: Complemental strand, 5832181 - 5832125
Alignment:
Q  410 aagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataa 466  Q
    |||||||||||||||||||||||| | ||| || |||  ||||||||||| ||||||    
T  5832181 aagtgtaagttatatgtcccacattggataaaagagtaaaggttgaacaccttataa 5832125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 259 - 339
Target Start/End: Complemental strand, 10074336 - 10074256
Alignment:
Q  259 gtatcagagccctgctacgacgaagggtaggaccgaggcagccgatccgttgtggagaaaccagcaacgacgatacaagca 339  Q
    |||||||||||| | | ||| |||||||| ||||||||| |||| || |||| | |||||  |||||||||| ||||||||    
T  10074336 gtatcagagccccggttcgaagaagggtacgaccgaggccgccggtcagttgcgcagaaagtagcaacgacggtacaagca 10074256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 400 - 480
Target Start/End: Complemental strand, 12085198 - 12085119
Alignment:
Q  400 tgttgtgtgtaagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataattgacatgactcat 480  Q
    |||| |||| |||||| ||||||||||||  ||||  ||||||| |||||| |||||||||||||||| || | |||||||    
T  12085198 tgttttgtgcaagtgtgagttatatgtcctgcatcagatagaaa-gtggagtttgaacactttataatagaaaggactcat 12085119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 80 - 152
Target Start/End: Complemental strand, 12092647 - 12092575
Alignment:
Q  80 tgttgtgtgtaagtgtcagttatatgtctcacattgtatagaaaagtggaggttgaacaatttataattgaga 152  Q
    ||||||||| ||| ||  |||| ||||| ||||| | ||||||||||||||||||| || ||||||| |||||    
T  12092647 tgttgtgtgcaagggtgtgttagatgtcccacatcggatagaaaagtggaggttgagcactttataagtgaga 12092575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 410 - 466
Target Start/End: Complemental strand, 14748493 - 14748437
Alignment:
Q  410 aagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataa 466  Q
    |||||| ||||||||||||||||||| ||| || |||  ||||||||||| ||||||    
T  14748493 aagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataa 14748437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 410 - 466
Target Start/End: Original strand, 26544052 - 26544108
Alignment:
Q  410 aagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataa 466  Q
    |||||| ||||||||||||||||||| ||| || |||  ||||||||||| ||||||    
T  26544052 aagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacacgttataa 26544108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 410 - 466
Target Start/End: Original strand, 29518506 - 29518562
Alignment:
Q  410 aagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataa 466  Q
    |||||| ||||||||||||||||||| ||| || |||  ||||||||||| ||||||    
T  29518506 aagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataa 29518562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 410 - 466
Target Start/End: Original strand, 32741182 - 32741238
Alignment:
Q  410 aagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataa 466  Q
    |||||| ||||||||||||||||||| ||| || |||  ||||||||||| ||||||    
T  32741182 aagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataa 32741238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 106; Significance: 8e-53; HSPs: 60)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 246 - 466
Target Start/End: Complemental strand, 22077815 - 22077594
Alignment:
Q  246 tgacacaatagtggtatcagagccctgctacgacgaagggtaggaccgaggcagccgatccgttgtggagaaaccagcaacgacgatacaagcaagtaag 345  Q
    |||| ||| ||||| |||||||||| | | |||||||||||| |||| ||||||||| ||||||| ||||||||||| ||||||||||||||||| ||||    
T  22077815 tgacccaacagtggcatcagagcccaggttcgacgaagggtatgaccaaggcagccggtccgttgcggagaaaccagtaacgacgatacaagcaattaag 22077716  T
Q  346 agcttccgctcga-gggaggcacgattaattgatggactcacatttgagggggagtgttgtgtgtaagtgtaagttatatgtcccacatcgaatagaaaa 444  Q
    |||||||||| || |||  ||| ||| |||  ||||||||||| |||||||||||||||||||| |||||| ||||||||||| ||||||| ||||||||    
T  22077715 agcttccgcttgatggggagcatgatgaatacatggactcacacttgagggggagtgttgtgtgcaagtgtgagttatatgtctcacatcggatagaaaa 22077616  T
Q  445 gtggaggttgaacactttataa 466  Q
    ||  ||||||||||| ||||||    
T  22077615 gtaaaggttgaacaccttataa 22077594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 307 - 461
Target Start/End: Complemental strand, 47380044 - 47379889
Alignment:
Q  307 gttgtggagaaaccagcaacgacgatacaagcaagtaagagcttccgctcgagggagg--cacgattaattgatggactcacatttgagggggagtgttg 404  Q
    |||| ||||||| ||||||||||||||||||||||||||| |||||||| ||||| ||  |||||| ||||| |||||| ||||||||||||||||||||    
T  47380044 gttgcggagaaagcagcaacgacgatacaagcaagtaagaacttccgcttgaggggggagcacgatgaattgttggacttacatttgagggggagtgttg 47379945  T
Q  405 tgtgtaagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactt 461  Q
      || |||||| |||||||| |||||||||| |||||||||||||||||||||||||    
T  47379944 a-tgcaagtgtgagttatatatcccacatcggatagaaaagtggaggttgaacactt 47379889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 307 - 444
Target Start/End: Complemental strand, 22077381 - 22077243
Alignment:
Q  307 gttgtggagaaaccagcaacgacgatacaagcaagtaagagcttccgctcgagggag-gcacgattaattgatggactcacatttgagggggagtgttgt 405  Q
    |||| ||||||||| ||| || |||||||||||||||||||||| |||| ||  | | ||| ||| ||| ||||||| |||| |||||||||||||||||    
T  22077381 gttgcggagaaaccggcagcggcgatacaagcaagtaagagctttcgcttgatagcgagcatgatgaatagatggacacacacttgagggggagtgttgt 22077282  T
Q  406 gtgtaagtgtaagttatatgtcccacatcgaatagaaaa 444  Q
    ||| |||||| ||||||||||||||||||| ||||||||    
T  22077281 gtgcaagtgtgagttatatgtcccacatcggatagaaaa 22077243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 312 - 434
Target Start/End: Original strand, 41157276 - 41157402
Alignment:
Q  312 ggagaaaccagcaacgacgatacaagcaagta-agagcttccgctcgagggaggcacgattaattgatggactcacatttgagggggag---tgttgtgt 407  Q
    |||||||||| |||||||||||||| |||||| |||||||||||||  |||  ||||||| |||||||||||||||| || ||||||||   ||||||||    
T  41157276 ggagaaaccaacaacgacgatacaaacaagtagagagcttccgctctgggggagcacgataaattgatggactcacacttaagggggagtattgttgtgt 41157375  T
Q  408 gtaagtgtaagttatatgtcccacatc 434  Q
    | |||||| ||||||||||||||||||    
T  41157376 gcaagtgtgagttatatgtcccacatc 41157402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 163 - 337
Target Start/End: Original strand, 34364591 - 34364771
Alignment:
Q  163 ccttaaggttttgggtaagtgtgtgatgtctctctcgctta------tgctctagcctcaatgtgggtggtcaccctg-gctcccctcaatgacacaata 255  Q
    ||||||||||||||||||| |||||||||||||||||||||      |||||||||||| |||||| ||||  ||||| ||||||| || |||| ||| |    
T  34364591 ccttaaggttttgggtaagagtgtgatgtctctctcgcttatgcggttgctctagcctcgatgtggatggt-tccctgagctcccc-cagtgacccaaca 34364688  T
Q  256 gtggtatcagagccctgctacgacgaagggtaggaccgaggcagccgatccg-ttgtggagaaaccagcaacgacgatacaag 337  Q
    ||||||||||||||| | | |||||||||||| |||| || |||||| |||| ||||| ||||| |||||||| |||||||||    
T  34364689 gtggtatcagagccccggttcgacgaagggtacgacccagacagccggtccgtttgtgcagaaagcagcaacggcgatacaag 34364771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 308 - 466
Target Start/End: Complemental strand, 66349 - 66186
Alignment:
Q  308 ttgtggagaaaccagcaacgacgatacaagcaag-taagagcttccgctcgagggaggcac--gattaattgatggactcacatttgagggggagtgttg 404  Q
    |||||||||| ||||||||| ||||||||||||| |||||||||||||| || || || ||  ||| ||| |||||||||||| |||||||| |||||||    
T  66349 ttgtggagaagccagcaacggcgatacaagcaagataagagcttccgcttgatgggggaacatgatgaatagatggactcacacttgaggggaagtgttg 66250  T
Q  405 tgtgtaagtgtaagttat-atgtcccacatcgaatagaaaagtggagg-ttgaacactttataa 466  Q
    |||| |||||| ||| || ||||| ||||||| ||||||||||  ||| |||||||| ||||||    
T  66249 tgtgcaagtgtgagtaatcatgtctcacatcggatagaaaagtaaaggtttgaacaccttataa 66186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 343 - 466
Target Start/End: Original strand, 24448212 - 24448336
Alignment:
Q  343 aagagcttccgctcgagggag-gcacgattaattgatggactcacatttgagggggagtgttgtgtgtaagtgtaagttatatgtcccacatcgaataga 441  Q
    |||||||| |||| ||||||  ||||||| ||||||||| |||||| |||||||||||||||||||| |||||||||||||||||   |||||  | |||    
T  24448212 aagagctttcgcttgagggaaagcacgatgaattgatgggctcacaattgagggggagtgttgtgtgcaagtgtaagttatatgttagacatctcaaaga 24448311  T
Q  442 aaagtggaggttgaacactttataa 466  Q
    |||||||| |||||||| |||||||    
T  24448312 aaagtggaagttgaacattttataa 24448336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 312 - 435
Target Start/End: Original strand, 37556011 - 37556139
Alignment:
Q  312 ggagaaaccagcaacgacgatacaagcaagtaagagcttccgctcga--gggaggcacgattaattgatggactcacatttgagggggagtgttg-tgtg 408  Q
    |||||||||||||||| ||||| ||||||||||||||||  ||| ||  ||| |||| ||| || ||||||||||||| |||||||||||||||| ||||    
T  37556011 ggagaaaccagcaacggcgatagaagcaagtaagagctttagcttgaagggggggcaggataaagtgatggactcacacttgagggggagtgttgttgtg 37556110  T
Q  409 t--aagtgtaagttatatgtcccacatcg 435  Q
    |  |||||| |||||||||||||||||||    
T  37556111 tacaagtgtgagttatatgtcccacatcg 37556139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 80 - 335
Target Start/End: Complemental strand, 22077660 - 22077392
Alignment:
Q  80 tgttgtgtgtaagtgtcagttatatgtctcacattgtatagaaaagtggaggttgaacaatttataattgagaagacctattt--------ccttaaggt 171  Q
    ||||||||| |||||| ||||||||||||||||| | ||||||||||  ||||||||||  |||||| | ||| |||| ||          |||||||||    
T  22077660 tgttgtgtgcaagtgtgagttatatgtctcacatcggatagaaaagtaaaggttgaacaccttataagtaagaggacccataaactcgtagccttaaggt 22077561  T
Q  172 tttgggtaagtgtgtgatgtctctctcgcttatgc------tctagcctcaatgtgggtggtcaccctggctcccctcaatgacacaatagtggtatcag 265  Q
    |||||||||| |||||  ||||||||| |||||||      || ||| || || |||  |||| ||| |||||||||   |||| ||| ||||| |||||    
T  22077560 tttgggtaagagtgtggcgtctctctcacttatgcggttgttcaagcatcgatatggacggtcccccaggctccccttg-tgacccaacagtggcatcag 22077462  T
Q  266 agccctgctacgacgaagggtaggaccgaggcagccgatccgttgtggagaaaccagcaacgacgataca 335  Q
    ||||| | | |||||||||||| |||| ||||||||| ||||||| ||||||||||||||||||| ||||    
T  22077461 agcccaggttcgacgaagggtacgaccaaggcagccggtccgttgcggagaaaccagcaacgacggtaca 22077392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 324 - 466
Target Start/End: Complemental strand, 3537393 - 3537246
Alignment:
Q  324 aacgacgatacaagcaagt--aagagcttccgctcgagggagg--cacgattaattgatggactcacatttgagggggagtgttg-tgtgtaagtgtaag 418  Q
    |||||||||||| |||||   ||||||||||||| || || ||  || ||| |||||||||||||||| |||||||||||||||| | || |||||| ||    
T  3537393 aacgacgatacatgcaaggtaaagagcttccgcttgaagggggagcaagatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgag 3537294  T
Q  419 ttatatgtcccacatcgaatagaaaagtggaggttgaacactttataa 466  Q
    ||||||||||||||||| ||| || |||  ||||||||||| ||||||    
T  3537293 ttatatgtcccacatcggataaaatagtaaaggttgaacaccttataa 3537246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 320 - 515
Target Start/End: Complemental strand, 26661773 - 26661564
Alignment:
Q  320 cagcaacgacgatacaagcaa-gtaagagcttccgctcga-gggag-gcacgattaattgatggactcacatttgagggggagtgttgt-gtgta--agt 413  Q
    |||||||||||||||| |||| ||||||||||||||| || ||||| | | ||| ||| |||||||||||| || |||||||||||||| |||||  |||    
T  26661773 cagcaacgacgatacatgcaaagtaagagcttccgcttgaagggagagtatgatgaatagatggactcacacttaagggggagtgttgttgtgtacaagt 26661674  T
Q  414 gtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataattgacatg--------actcattttcttaaggtttcgggtaagagtg 505  Q
    || |||||||||||||||||||  || || |||  ||||||||||| |||||| ||| | |        |||||||  |||||||||| |||||||||||    
T  26661673 gtgagttatatgtcccacatcgggtaaaagagtaaaggttgaacaccttataagtgagaggacccataaactcattgccttaaggttttgggtaagagtg 26661574  T
Q  506 tggtgtctct 515  Q
    ||||||||||    
T  26661573 tggtgtctct 26661564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 163 - 327
Target Start/End: Complemental strand, 66546 - 66377
Alignment:
Q  163 ccttaaggttttgggtaagtgtgtgatgtctctctcgcttatgc------tctagcctcaatgtgggtggtcaccctggctcccctcaatgacacaatag 256  Q
    ||||||||||||||||||| || |   ||||||||||||| |||      ||||||||||||||||  ||| | ||  |||||||||| |||| ||| ||    
T  66546 ccttaaggttttgggtaagagtatagcgtctctctcgcttgtgcggttgttctagcctcaatgtggacggttatccaagctcccctca-tgacccaacag 66448  T
Q  257 tggtatcagagccctgctacgacgaagggtaggaccgaggcagccgatccgttgtggagaaaccagcaacg 327  Q
    || |||||||| || | | |||||||||||| |||||||||||||| ||||||| |||||||||| |||||    
T  66447 tgatatcagagtcccggttcgacgaagggtacgaccgaggcagccggtccgttgcggagaaaccaacaacg 66377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 328 - 466
Target Start/End: Complemental strand, 30630877 - 30630737
Alignment:
Q  328 acgatacaagcaagtaagagcttccgctcgagggagg--cacgattaattgatggactcacatttgagggggagtgttgtgtgtaagtgtaagttatatg 425  Q
    |||||||||||||||||| |||||| || || || ||  || ||| |||||||||||||||| ||||| ||||||||| |||| |||||| | |||||||    
T  30630877 acgatacaagcaagtaagtgcttcctcttgaagggggagcatgatgaattgatggactcacacttgagagggagtgttatgtgcaagtgtgatttatatg 30630778  T
Q  426 tcccacatcgaatagaaaagtggaggttgaacactttataa 466  Q
    || ||||||| ||| |||| |  |||||  |||||||||||    
T  30630777 tctcacatcggataaaaaattaaaggtttgacactttataa 30630737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 398 - 462
Target Start/End: Complemental strand, 19283622 - 19283558
Alignment:
Q  398 agtgttgtgtgtaagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacacttt 462  Q
    ||||||||||| |||||| |||||||||||||||| || ||||||||||||||||||| ||||||    
T  19283622 agtgttgtgtgcaagtgtgagttatatgtcccacaccggatagaaaagtggaggttgagcacttt 19283558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 324 - 458
Target Start/End: Complemental strand, 44290703 - 44290565
Alignment:
Q  324 aacgacgatacaagcaa-gtaagagcttccgctcgagggagg--cacgattaattgatggactcacatttgagggggagtgttg-tgtgtaagtgtaagt 419  Q
    |||||||||||| |||| |||||||||||| || || || ||  || ||| ||| |||||||||||| |||||||||||||||| | || |||||| |||    
T  44290703 aacgacgatacaggcaaagtaagagcttccccttgaagggggagcatgatgaatagatggactcacacttgagggggagtgttggtttgcaagtgtgagt 44290604  T
Q  420 tatatgtcccacatcgaatagaaaagtggaggttgaaca 458  Q
    |||||||||||||||| ||| || |||  ||||||||||    
T  44290603 tatatgtcccacatcggataaaatagtaaaggttgaaca 44290565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 400 - 466
Target Start/End: Original strand, 22793271 - 22793337
Alignment:
Q  400 tgttgtgtgtaagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataa 466  Q
    ||||||| | |||||| ||||||||||||||||||| |||||||||| ||||||||| |||||||||    
T  22793271 tgttgtgagcaagtgtgagttatatgtcccacatcgtatagaaaagtagaggttgaaaactttataa 22793337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 316 - 466
Target Start/End: Original strand, 34364829 - 34364984
Alignment:
Q  316 aaaccagcaacgacgatacaagcaagtaagagcttccgctcgagggag-gcacgattaatt-gatggactcacatttgagggggagtgttgt---gtgta 410  Q
    |||||||||||  ||| ||||||||||||||||||||| | ||||| | ||| ||| ||   |||||||||||| |||||||||||||||||   ||| |    
T  34364829 aaaccagcaacagcgacacaagcaagtaagagcttccgattgagggggagcatgatgaaaaagatggactcacacttgagggggagtgttgttgtgtgca 34364928  T
Q  411 agtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataa 466  Q
    ||||| ||||||||||| ||||||| ||| || | |  ||||||||||| ||||||    
T  34364929 agtgtgagttatatgtcacacatcggataaaataataaaggttgaacaccttataa 34364984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 400 - 480
Target Start/End: Complemental strand, 1188753 - 1188673
Alignment:
Q  400 tgttgtgtgtaagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataattgacatgactcat 480  Q
    ||||||||| |||||| |||||||||| ||| |||| |||||||||||||||||||| | ||||||| ||| | |||||||    
T  1188753 tgttgtgtgcaagtgtgagttatatgttccatatcggatagaaaagtggaggttgaatattttataagtgagaagactcat 1188673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 390 - 466
Target Start/End: Complemental strand, 50469256 - 50469180
Alignment:
Q  390 tgagggggagtgttgtgtgtaagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataa 466  Q
    ||||||||||||||||||| |||||| |||||||||||| |||||  |||  |||||  ||||||||||||||||||    
T  50469256 tgagggggagtgttgtgtgcaagtgtgagttatatgtcctacatcagataataaagtaaaggttgaacactttataa 50469180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 82 - 157
Target Start/End: Complemental strand, 1187527 - 1187452
Alignment:
Q  82 ttgtgtgtaagtgtcagttatatgtctcacattgtatagaaaagtggaggttgaacaatttataattgagaagacc 157  Q
    ||||||| |||||| | ||||||||||||||| | ||| ||||||||||||| |||| ||||||| ||||||||||    
T  1187527 ttgtgtgcaagtgtgaattatatgtctcacatcgaatataaaagtggaggttaaacattttataagtgagaagacc 1187452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 77 - 152
Target Start/End: Original strand, 22793268 - 22793343
Alignment:
Q  77 aattgttgtgtgtaagtgtcagttatatgtctcacattgtatagaaaagtggaggttgaacaatttataattgaga 152  Q
    |||||||||| | |||||| ||||||||||| ||||| |||||||||||| ||||||||| | ||||||| |||||    
T  22793268 aattgttgtgagcaagtgtgagttatatgtcccacatcgtatagaaaagtagaggttgaaaactttataagtgaga 22793343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 312 - 355
Target Start/End: Original strand, 34649721 - 34649764
Alignment:
Q  312 ggagaaaccagcaacgacgatacaagcaagtaagagcttccgct 355  Q
    ||||||||||||||||||||||||||||||||||||||| ||||    
T  34649721 ggagaaaccagcaacgacgatacaagcaagtaagagctttcgct 34649764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 316 - 393
Target Start/End: Complemental strand, 41184277 - 41184198
Alignment:
Q  316 aaaccagcaacgacgatacaagcaagt-aagagcttccgctcgagggag-gcacgattaattgatggactcacatttgag 393  Q
    ||||||||||||||||||||| ||||| ||||||||||||| ||||| | ||||||| || ||||||||||||| |||||    
T  41184277 aaaccagcaacgacgatacaaacaagtaaagagcttccgcttgagggggagcacgatgaagtgatggactcacacttgag 41184198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 324 - 466
Target Start/End: Complemental strand, 48588733 - 48588587
Alignment:
Q  324 aacgacgatacaagcaag-taagagcttccgctcgagggag--gcacgattaattgatggactcacatttgagggggagtgtt-gtgtgtaagtgtaagt 419  Q
    |||||||||||| ||||  |||||||||||||| || || |  ||| ||| ||| |||||||||||| ||||||||||||||| || || |||||| |||    
T  48588733 aacgacgatacatgcaaaataagagcttccgcttgaaggggtagcatgatgaatagatggactcacacttgagggggagtgttggtttgcaagtgtgagt 48588634  T
Q  420 tatatgtcccacatcgaatagaaaagtggaggttgaacactttataa 466  Q
    | ||||||| |||||| ||| || |||  ||||||||||| ||||||    
T  48588633 tctatgtccgacatcggataaaatagtaaaggttgaacaccttataa 48588587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 400 - 466
Target Start/End: Complemental strand, 37850765 - 37850699
Alignment:
Q  400 tgttgtgtgtaagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataa 466  Q
    ||||||||| |||||| ||||||||||||||||||| ||| || ||| |||||||||||| ||||||    
T  37850765 tgttgtgtgcaagtgtgagttatatgtcccacatcgcataaaacagtagaggttgaacaccttataa 37850699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 400 - 515
Target Start/End: Complemental strand, 39066365 - 39066242
Alignment:
Q  400 tgttgtgtgtaagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataattgacatgac--------tcattttcttaaggt 491  Q
    ||||||||| |||||| |||||||| | |||||||| ||||||||||  ||||||||||| |||||| | | |||||        ||||| |||||||||    
T  39066365 tgttgtgtgcaagtgtgagttatatattccacatcggatagaaaagtaaaggttgaacaccttataactaagatgacccataaaatcattgtcttaaggt 39066266  T
Q  492 ttcgggtaagagtgtggtgtctct 515  Q
    || || ||||||||||||||||||    
T  39066265 tttggataagagtgtggtgtctct 39066242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 402 - 466
Target Start/End: Complemental strand, 1187527 - 1187463
Alignment:
Q  402 ttgtgtgtaagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataa 466  Q
    ||||||| |||||| | ||||||||| ||||||||||| ||||||||||||| |||| |||||||    
T  1187527 ttgtgtgcaagtgtgaattatatgtctcacatcgaatataaaagtggaggttaaacattttataa 1187463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 333 - 409
Target Start/End: Complemental strand, 1188463 - 1188387
Alignment:
Q  333 acaagcaagtaagagcttccgctcgagggaggcacgattaattgatggactcacatttgagggggagtgttgtgtgt 409  Q
    |||||||||||||||||||| || || ||  ||| ||| |||||||||||||||| ||||||  |||||||||||||    
T  1188463 acaagcaagtaagagcttccacttgaagggagcatgatgaattgatggactcacacttgaggatgagtgttgtgtgt 1188387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 80 - 156
Target Start/End: Complemental strand, 1188753 - 1188677
Alignment:
Q  80 tgttgtgtgtaagtgtcagttatatgtctcacattgtatagaaaagtggaggttgaacaatttataattgagaagac 156  Q
    ||||||||| |||||| ||||||||||  || || | |||||||||||||||||||| | ||||||| |||||||||    
T  1188753 tgttgtgtgcaagtgtgagttatatgttccatatcggatagaaaagtggaggttgaatattttataagtgagaagac 1188677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 163 - 206
Target Start/End: Original strand, 17294661 - 17294704
Alignment:
Q  163 ccttaaggttttgggtaagtgtgtgatgtctctctcgcttatgc 206  Q
    ||||||||||||||||||| ||||| ||||||||||||||||||    
T  17294661 ccttaaggttttgggtaagagtgtggtgtctctctcgcttatgc 17294704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 163 - 206
Target Start/End: Original strand, 34365009 - 34365052
Alignment:
Q  163 ccttaaggttttgggtaagtgtgtgatgtctctctcgcttatgc 206  Q
    ||||||||||||||||||| ||||| ||||||||||||||||||    
T  34365009 ccttaaggttttgggtaagagtgtggtgtctctctcgcttatgc 34365052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 207 - 302
Target Start/End: Complemental strand, 44290848 - 44290753
Alignment:
Q  207 tctagcctcaatgtgggtggtcaccctggctcccctcaatgacacaatagtggtatcagagccctgctacgacgaagggtaggaccgaggcagccg 302  Q
    ||||||||| ||||||  |||| |||  ||||||| || |||| ||| |||||||||||||||| | | |||||||||||  ||||||||||||||    
T  44290848 tctagcctcgatgtggacggtcccccgagctccccccactgacccaacagtggtatcagagccccggttcgacgaagggtgcgaccgaggcagccg 44290753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 400 - 466
Target Start/End: Complemental strand, 66637 - 66571
Alignment:
Q  400 tgttgtgtgtaagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataa 466  Q
    ||||||||| |||||| |||||||||| ||| |||| ||||||||||  ||||||||||| ||||||    
T  66637 tgttgtgtgcaagtgtgagttatatgttccatatcggatagaaaagtaaaggttgaacaccttataa 66571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 163 - 294
Target Start/End: Original strand, 9955993 - 9956129
Alignment:
Q  163 ccttaaggttttgggtaagtgtgtgatgtctctctcgctt------atgctctagcctcaatgtgggtggtcaccctggctcccctcaatgacacaatag 256  Q
    ||||||||||||||||||| ||||||||||||||| ||||       |||||||||||| ||||| | |||| ||  ||||| ||||  |||| ||| ||    
T  9955993 ccttaaggttttgggtaagagtgtgatgtctctcttgcttgtgcggttgctctagcctcgatgtgagcggtcccctaggctctcctc-gtgacccaacag 9956091  T
Q  257 tggtatcagagccctgctacgacgaagggtaggaccga 294  Q
    |||||||||||||  | | |||||||||||| ||||||    
T  9956092 tggtatcagagcctcggttcgacgaagggtacgaccga 9956129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 400 - 466
Target Start/End: Original strand, 17294570 - 17294636
Alignment:
Q  400 tgttgtgtgtaagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataa 466  Q
    ||||||||  |||||| ||||||||||||||||||| ||| || |||  ||||||||||||||||||    
T  17294570 tgttgtgtacaagtgtgagttatatgtcccacatcggataaaagagtaaaggttgaacactttataa 17294636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 400 - 458
Target Start/End: Complemental strand, 24600479 - 24600421
Alignment:
Q  400 tgttgtgtgtaagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaaca 458  Q
    ||||||||| |||||| |||||||||||||| |||| ||||||||||  ||||||||||    
T  24600479 tgttgtgtgcaagtgtgagttatatgtcccatatcggatagaaaagtaaaggttgaaca 24600421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 400 - 466
Target Start/End: Complemental strand, 41184590 - 41184524
Alignment:
Q  400 tgttgtgtgtaagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataa 466  Q
    ||||||||| |||||| ||||||||||| ||||||| ||| || |||  ||||||||||||||||||    
T  41184590 tgttgtgtgcaagtgtgagttatatgtctcacatcggataaaatagtaaaggttgaacactttataa 41184524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 79 - 152
Target Start/End: Original strand, 50556443 - 50556516
Alignment:
Q  79 ttgttgtgtgtaagtgtcagttatatgtctcacattgtatagaaaagtggaggttgaacaatttataattgaga 152  Q
    |||||| ||| ||||||  ||||||| || |||||  |||||||||| |||||||||||||||||||| |||||    
T  50556443 ttgttgcgtgcaagtgtgggttatatatcacacatcatatagaaaagcggaggttgaacaatttataagtgaga 50556516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 80 - 152
Target Start/End: Complemental strand, 19283620 - 19283548
Alignment:
Q  80 tgttgtgtgtaagtgtcagttatatgtctcacattgtatagaaaagtggaggttgaacaatttataattgaga 152  Q
    ||||||||| |||||| ||||||||||| ||||  | ||||||||||||||||||| || ||| ||| |||||    
T  19283620 tgttgtgtgcaagtgtgagttatatgtcccacaccggatagaaaagtggaggttgagcactttgtaaatgaga 19283548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 475 - 515
Target Start/End: Complemental strand, 32594798 - 32594758
Alignment:
Q  475 actcattttcttaaggtttcgggtaagagtgtggtgtctct 515  Q
    ||||||| ||||||||||| |||||||||||||||||||||    
T  32594798 actcattgtcttaaggttttgggtaagagtgtggtgtctct 32594758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 372 - 435
Target Start/End: Complemental strand, 50051845 - 50051781
Alignment:
Q  372 aattgatggactcacatttgagggggagtgttg-tgtgtaagtgtaagttatatgtcccacatcg 435  Q
    |||| ||||||||||| |||||||||| ||||| | || |||||| |||||||||||||||||||    
T  50051845 aattaatggactcacacttgagggggaatgttggtttgcaagtgtgagttatatgtcccacatcg 50051781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 163 - 202
Target Start/End: Complemental strand, 26661596 - 26661557
Alignment:
Q  163 ccttaaggttttgggtaagtgtgtgatgtctctctcgctt 202  Q
    ||||||||||||||||||| ||||| ||||||||||||||    
T  26661596 ccttaaggttttgggtaagagtgtggtgtctctctcgctt 26661557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 79 - 146
Target Start/End: Complemental strand, 41184591 - 41184524
Alignment:
Q  79 ttgttgtgtgtaagtgtcagttatatgtctcacattgtatagaaaagtggaggttgaacaatttataa 146  Q
    |||||||||| |||||| ||||||||||||||||| | ||| || |||  |||||||||| |||||||    
T  41184591 ttgttgtgtgcaagtgtgagttatatgtctcacatcggataaaatagtaaaggttgaacactttataa 41184524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 399 - 446
Target Start/End: Original strand, 44685448 - 44685495
Alignment:
Q  399 gtgttgtgtgtaagtgtaagttatatgtcccacatcgaatagaaaagt 446  Q
    |||||||||| |||||| |||||||||||||| |||| ||||||||||    
T  44685448 gtgttgtgtgcaagtgtgagttatatgtcccatatcggatagaaaagt 44685495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 381 - 435
Target Start/End: Original strand, 11977251 - 11977308
Alignment:
Q  381 actcacatttgagggggagtgttg-tgtgta--agtgtaagttatatgtcccacatcg 435  Q
    ||||||| |||||||||||||||| ||||||  ||||| |||||||||||||||||||    
T  11977251 actcacacttgagggggagtgttgctgtgtacaagtgtgagttatatgtcccacatcg 11977308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 163 - 197
Target Start/End: Original strand, 11977364 - 11977398
Alignment:
Q  163 ccttaaggttttgggtaagtgtgtgatgtctctct 197  Q
    ||||||||||||||||||| |||||||||||||||    
T  11977364 ccttaaggttttgggtaagagtgtgatgtctctct 11977398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 400 - 466
Target Start/End: Complemental strand, 24132150 - 24132084
Alignment:
Q  400 tgttgtgtgtaagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataa 466  Q
    |||||| || || ||| ||||||||||||| ||||| ||||||||||  ||||||||||| ||||||    
T  24132150 tgttgtatgcaactgtgagttatatgtccctcatcggatagaaaagtaaaggttgaacaccttataa 24132084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 400 - 466
Target Start/End: Original strand, 34364500 - 34364566
Alignment:
Q  400 tgttgtgtgtaagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataa 466  Q
    ||||||||| |||||| ||||||||||| ||||||| ||| || |||  ||||||||||| ||||||    
T  34364500 tgttgtgtgcaagtgtgagttatatgtctcacatcggataaaatagtaaaggttgaacaccttataa 34364566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 246 - 339
Target Start/End: Original strand, 34649611 - 34649704
Alignment:
Q  246 tgacacaatagtggtatcagagccctgctacgacgaagggtaggaccgaggcagccgatccg-ttgtggagaaaccagcaacgacgatacaagca 339  Q
    |||| ||| |||||||||||||||| | | ||| |||||||| |||||||||||||| |||| ||| | ||||| || |||||||| ||||||||    
T  34649611 tgacccaacagtggtatcagagccccgtt-cgatgaagggtacgaccgaggcagccggtccgtttgcgcagaaagcaacaacgacggtacaagca 34649704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 400 - 466
Target Start/End: Original strand, 41142365 - 41142431
Alignment:
Q  400 tgttgtgtgtaagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataa 466  Q
    |||| |||| |||||| ||||||||||||||||||| ||| || |||  ||||||||||| ||||||    
T  41142365 tgttctgtgcaagtgtgagttatatgtcccacatcggataaaacagtaaaggttgaacaccttataa 41142431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 163 - 205
Target Start/End: Original strand, 41759567 - 41759609
Alignment:
Q  163 ccttaaggttttgggtaagtgtgtgatgtctctctcgcttatg 205  Q
    ||||||||||||||||||| ||||| ||||||||| |||||||    
T  41759567 ccttaaggttttgggtaagagtgtggtgtctctcttgcttatg 41759609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 281 - 338
Target Start/End: Complemental strand, 1188562 - 1188505
Alignment:
Q  281 aagggtaggaccgaggcagccgatccgttgtggagaaaccagcaacgacgatacaagc 338  Q
    ||||||| ||||||| |||| |||  |||| ||||||| |||||||||||||||||||    
T  1188562 aagggtatgaccgagacagctgatttgttgcggagaaagcagcaacgacgatacaagc 1188505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 163 - 301
Target Start/End: Complemental strand, 31767235 - 31767093
Alignment:
Q  163 ccttaaggttttgggtaagtgtgtgatgtctctctcgcttatgc------tctagcctcaatgtgggtggtcaccctggctcccctcaatgacacaatag 256  Q
    ||||||||||||||||||| |||||| |||| ||| |||| ||       ||||| ||| ||||||  |||| |||  ||| |||||| |||| ||| ||    
T  31767235 ccttaaggttttgggtaagagtgtgacgtctatcttgcttgtgtggttgttctagactcgatgtggacggtcccccaagcttccctca-tgacccaacag 31767137  T
Q  257 tggtatcagagccctgctacgacgaagggtaggaccgaggcagcc 301  Q
    |||||||||||||| | | |||||||||||| |||||||||||||    
T  31767136 tggtatcagagccccgtt-cgacgaagggtacgaccgaggcagcc 31767093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 157 - 197
Target Start/End: Original strand, 14318945 - 14318985
Alignment:
Q  157 ctatttccttaaggttttgggtaagtgtgtgatgtctctct 197  Q
    ||||| ||||||||||||||||||| ||||| |||||||||    
T  14318945 ctattgccttaaggttttgggtaagagtgtggtgtctctct 14318985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 400 - 456
Target Start/End: Complemental strand, 21378206 - 21378150
Alignment:
Q  400 tgttgtgtgtaagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaa 456  Q
    ||||||||| |||||| |||||||||||||| |||| |||||| |||  ||||||||    
T  21378206 tgttgtgtgcaagtgtcagttatatgtcccagatcggatagaacagtaaaggttgaa 21378150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 410 - 466
Target Start/End: Original strand, 34649441 - 34649497
Alignment:
Q  410 aagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataa 466  Q
    |||||| ||||||||||||||||||| ||| || |||  ||||||||||| ||||||    
T  34649441 aagtgtgagttatatgtcccacatcggataaaagagtaaaggttgaacaccttataa 34649497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 410 - 466
Target Start/End: Complemental strand, 38804510 - 38804454
Alignment:
Q  410 aagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataa 466  Q
    |||||| ||||||| ||||||||||||||| || |||  ||||||||||| ||||||    
T  38804510 aagtgtgagttatacgtcccacatcgaataaaagagtaaaggttgaacacattataa 38804454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 410 - 466
Target Start/End: Complemental strand, 44290980 - 44290924
Alignment:
Q  410 aagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataa 466  Q
    |||||| ||||||||||||||||||| ||| || |||  ||||||||||| ||||||    
T  44290980 aagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataa 44290924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 90 - 138
Target Start/End: Complemental strand, 47379940 - 47379892
Alignment:
Q  90 aagtgtcagttatatgtctcacattgtatagaaaagtggaggttgaaca 138  Q
    |||||| |||||||| || ||||| | ||||||||||||||||||||||    
T  47379940 aagtgtgagttatatatcccacatcggatagaaaagtggaggttgaaca 47379892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 479 - 515
Target Start/End: Complemental strand, 50052101 - 50052065
Alignment:
Q  479 attttcttaaggtttcgggtaagagtgtggtgtctct 515  Q
    |||||||||| |||| |||||||||||||||||||||    
T  50052101 attttcttaaagttttgggtaagagtgtggtgtctct 50052065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 86; Significance: 7e-41; HSPs: 53)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 312 - 466
Target Start/End: Original strand, 40518485 - 40518641
Alignment:
Q  312 ggagaaaccagcaacgacgatacaagcaagtaagagcttccgctcgagggagg--cacgattaattgatggactcacatttgagggggagtgttgtgtgt 409  Q
    ||||||||||||||||||||||||||||||||||||||||| || ||||| ||  || ||| |||||||||||||||| |||||||||||| ||||||      
T  40518485 ggagaaaccagcaacgacgatacaagcaagtaagagcttccacttgaggggggagcatgatgaattgatggactcacacttgagggggagtattgtgttc 40518584  T
Q  410 aagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataa 466  Q
    |||||| ||||||||||||||||||  ||||||||||  ||||||||||| ||||||    
T  40518585 aagtgtgagttatatgtcccacatcagatagaaaagtaaaggttgaacaccttataa 40518641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 165 - 458
Target Start/End: Complemental strand, 18372066 - 18371763
Alignment:
Q  165 ttaaggttttgggtaagtgtgtgatgtctctctcgcttatgc------tctagcctcaatgtgggtggtcaccctg-gctcccctcaatgacacaatagt 257  Q
    ||||||||||||||||| ||||| ||| |||||||||| |||      |||||||||||||||   |||  ||| | |||||||||| |||| ||| |||    
T  18372066 ttaaggttttgggtaagagtgtggtgtttctctcgcttgtgcggttgctctagcctcaatgtgaacggttcccccgagctcccctca-tgacccaacagt 18371968  T
Q  258 ggtatcagagccctgctacgacgaagggtaggaccgaggcagccgatccgtt-gtggagaaaccagcaacgacgatacaagcaagtaa-gagcttccgct 355  Q
    |||||||||||| || | |||| ||||||| |||||||||||||| | |||| | ||||||||||||| || |||||||| ||| ||| |||||||||||    
T  18371967 ggtatcagagcc-tggttcgacaaagggtacgaccgaggcagccggttcgtttgcggagaaaccagcagcggcgatacaaacaaataaagagcttccgct 18371869  T
Q  356 cga--gggaggcacgattaattgatggactcacatttgagggggagtgttg-tgtgtaagtgtaagttatatgtcccacatcgaatagaaaagtggaggt 452  Q
     ||  ||| |||||||| || ||||||||||||| ||||||||||||| || ||||||   || ||||||||||| ||||||| ||| || |||  ||||    
T  18371868 tgaagggggggcacgataaagtgatggactcacacttgagggggagtgctgttgtgtagaagtgagttatatgtcacacatcggataaaatagtaaaggt 18371769  T
Q  453 tgaaca 458  Q
    ||||||    
T  18371768 tgaaca 18371763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 304 - 435
Target Start/End: Original strand, 45122898 - 45123034
Alignment:
Q  304 tccgttgtggagaaaccagcaacgacgatacaagcaagtaagagcttccgctcgagggagg--cacgattaattgatggactcacatttgagggggagtg 401  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||| || || ||  || ||| ||| |||||||| ||| |||||||||||||    
T  45122898 tccgttgcagagaaaccagcaacgacgatacaagcaagtaagagcttccgcttgaagggggaacatgatgaatagatggacttacacttgagggggagtg 45122997  T
Q  402 t---tgtgtgtaagtgtaagttatatgtcccacatcg 435  Q
    |   |||||| |||||| |||||||||||||||||||    
T  45122998 ttgctgtgtgcaagtgtgagttatatgtcccacatcg 45123034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 235 - 434
Target Start/End: Original strand, 30359434 - 30359636
Alignment:
Q  235 gctcccctcaatgacacaatagtggtatcagagccctgctacgacgaagggtaggaccgaggcagccgatccg-ttgtggagaaaccagcaacgacgata 333  Q
    ||||||||||||||| ||| ||||||||||||| |||| | |||||||||| | |||||||||||||| |||| |||   ||| ||||||||||||||||    
T  30359434 gctcccctcaatgacccaacagtggtatcagag-cctg-ttcgacgaaggg-acgaccgaggcagccggtccgtttgcacagacaccagcaacgacgata 30359530  T
Q  334 caagcaagtaagagcttccgctcga--gggaggcacgattaattgatggactcacatttgagggggagtgttg-tgtgt--aagtgtaagttatatgtcc 428  Q
     || ||| |||||||||||||| ||  |||  ||| ||| |||||||||||||||| |||||||||| ||||| |||||  |||||| |||||||||||     
T  30359531 aaaccaattaagagcttccgcttgaagggggagcatgataaattgatggactcacacttgagggggaatgttgttgtgtacaagtgtgagttatatgtct 30359630  T
Q  429 cacatc 434  Q
    ||||||    
T  30359631 cacatc 30359636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 311 - 466
Target Start/End: Complemental strand, 9482857 - 9482703
Alignment:
Q  311 tggagaaaccagcaacgacgatacaagcaagtaagagcttccgctcgagggaggcacgattaattgatggactcacatttgagggggagtgttg-tgtgt 409  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| || || |||||  | ||||| |||||||||  |||||||||||||||| |||||    
T  9482857 tggagaaaccagcaacggcgatacaagcaagtaagagcttccgcttgaagggggcacagtgaattgttggactcac--ttgagggggagtgttgttgtgt 9482760  T
Q  410 aagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataa 466  Q
    |   || |||||||||| |||||| | ||| || |||  ||||||||||| ||||||    
T  9482759 acaagtgagttatatgttccacatgggataaaagagtaaaggttgaacaccttataa 9482703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 289 - 435
Target Start/End: Complemental strand, 18372652 - 18372501
Alignment:
Q  289 gaccgaggcagccgatccgtt-gtggagaaaccagcaacgacgatacaagcaagtaa-gagcttccgctcga--gggaggcacgattaattgatggactc 384  Q
    |||||||||||||| |||||| | ||||||||||||| || |||| ||| ||| ||| |||||||| || ||  |||| ||||||| || ||||||||||    
T  18372652 gaccgaggcagccggtccgtttgcggagaaaccagcagcggcgattcaaacaaataaagagcttccccttgaaggggaagcacgataaagtgatggactc 18372553  T
Q  385 acatttgagggggagtgttg-tgtgtaagtgtaagttatatgtcccacatcg 435  Q
    ||| |||||||||||||||| |||| |||||| |||||||||||||||||||    
T  18372552 acacttgagggggagtgttgttgtgaaagtgtgagttatatgtcccacatcg 18372501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 314 - 466
Target Start/End: Complemental strand, 8919019 - 8918863
Alignment:
Q  314 agaaaccagcaacgacgatacaagcaagtaagagcttccgctcgagggagg-cacgattaattgatggactcacatttgagggggagtgttgt---gtgt 409  Q
    ||||| |||||||| |||||||||||||| ||||||||||||  | || || || ||| ||| |||||||||||| |||||||||||||||||   |||     
T  8919019 agaaatcagcaacggcgatacaagcaagttagagcttccgcttaaagggggacatgatgaatagatggactcacacttgagggggagtgttgttgtgtgc 8918920  T
Q  410 aagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataa 466  Q
    |||||| ||||| ||||||||||||  |||| | |||  ||||||||||||||||||    
T  8918919 aagtgtgagttacatgtcccacatcagatagcagagtaaaggttgaacactttataa 8918863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 374 - 466
Target Start/End: Complemental strand, 4154473 - 4154379
Alignment:
Q  374 ttgatggactcacatttgagggggag--tgttgtgtgtaagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataa 466  Q
    |||||||||||||| ||||||||||   ||||||||| || ||| |||||||||||| |||||  ||||||||||||||||||||||||||||||    
T  4154473 ttgatggactcacacttgagggggaaattgttgtgtgcaaatgtgagttatatgtcctacatcagatagaaaagtggaggttgaacactttataa 4154379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 399 - 466
Target Start/End: Complemental strand, 4154832 - 4154765
Alignment:
Q  399 gtgttgtgtgtaagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataa 466  Q
    |||||||||| |||||| ||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  4154832 gtgttgtgtgcaagtgtgagttatatgtcccacatctgatagaaaagtggaggttgaacactttataa 4154765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 364 - 466
Target Start/End: Complemental strand, 18372458 - 18372355
Alignment:
Q  364 gcacgattaattgatggactcacatttgagggggagtgttg-tgtgtaagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacacttt 462  Q
    ||||||| || ||||||||||||| |||||||||||||||| |||| |||||| ||||||||||| ||||||| ||| || |||  ||||||||||| ||    
T  18372458 gcacgataaagtgatggactcacacttgagggggagtgttgttgtgaaagtgtgagttatatgtctcacatcggataaaatagtaaaggttgaacacctt 18372359  T
Q  463 ataa 466  Q
    ||||    
T  18372358 ataa 18372355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 246 - 466
Target Start/End: Original strand, 34835047 - 34835268
Alignment:
Q  246 tgacacaatagtggtatcagagccctgctacgacgaagggtaggaccgaggcagccgatccgtt-gtggagaaaccagc----aacgacgatacaagcaa 340  Q
    |||| ||| |||||||||||||||| | | |||||||||||| |||||||||||||| |||||| |  ||||| |||||    |||| ||||||||||||    
T  34835047 tgacccaacagtggtatcagagcccggtt-cgacgaagggtacgaccgaggcagccggtccgtttgcagagaagccagccagcaacggcgatacaagcaa 34835145  T
Q  341 gtaagagcttccgctcgagggaggcacgattaattgatggactcacatttgagggggagtgttg-tgtgta--agtgtaagttatatgtcccacatcgaa 437  Q
    |||| | | |    || |||| |||| ||| |||||||||||||||  |||||||||||||||| ||||||  || || ||||||||||||||||||  |    
T  34835146 gtaaaatcct----tcaaggggggcatgatgaattgatggactcac--ttgagggggagtgttgctgtgtacaagggtgagttatatgtcccacatccga 34835239  T
Q  438 tagaaaagtggaggttgaacactttataa 466  Q
    || || |||  ||||||||||| ||||||    
T  34835240 taaaatagtaaaggttgaacaccttataa 34835268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 312 - 434
Target Start/End: Original strand, 147734 - 147856
Alignment:
Q  312 ggagaaaccagcaacgacgatacaagcaagtaagagcttccgctcgagggaggcac-gattaattgatggactcacatttgagggggag---tgttgtgt 407  Q
    |||||||||| |||||||||||||||    ||||||||||||||  | || ||  | ||| |||||||||||||||| |||||||||||   ||||||||    
T  147734 ggagaaaccaacaacgacgatacaag----taagagcttccgcttaaagggggagctgatgaattgatggactcacacttgagggggagtgttgttgtgt 147829  T
Q  408 gtaagtgtaagttatatgtcccacatc 434  Q
    | |||||| ||||||||||||||||||    
T  147830 gcaagtgtgagttatatgtcccacatc 147856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 364 - 515
Target Start/End: Original strand, 9309309 - 9309471
Alignment:
Q  364 gcacgattaattgatggactcacatttgagggggagtgttgt---gtgtaagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacact 460  Q
    ||||||| || ||||||||||||| |||||||||||||||||   ||| |||||| ||||||||||||||||||| ||| || |||  | |||||||||     
T  9309309 gcacgataaagtgatggactcacaattgagggggagtgttgttgtgtgcaagtgtgagttatatgtcccacatcggataaaagagtaaatgttgaacacc 9309408  T
Q  461 ttataattgacatgac--------tcattttcttaaggtttcgggtaagagtgtggtgtctct 515  Q
    |||||| | | | |||        |||||  |||||||| |||||||||||||||||||||||    
T  9309409 ttataagtaagaggacccttaaactcattgccttaaggtgtcgggtaagagtgtggtgtctct 9309471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 312 - 396
Target Start/End: Complemental strand, 3038185 - 3038099
Alignment:
Q  312 ggagaaaccagcaacgacgatacaa-gcaagtaagagcttccgctcgagggag-gcacgattaattgatggactcacatttgagggg 396  Q
    |||||||||||||||| |||||||| ||||||||||||||||||| ||||| | || |||| |||||||||||||||| || |||||    
T  3038185 ggagaaaccagcaacggcgatacaaagcaagtaagagcttccgcttgagggggagctcgatgaattgatggactcacactttagggg 3038099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 400 - 466
Target Start/End: Complemental strand, 9620453 - 9620387
Alignment:
Q  400 tgttgtgtgtaagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataa 466  Q
    ||||||||| |||||| |||||||| |||||| | |||||||||||||||| |||||||||||||||    
T  9620453 tgttgtgtgcaagtgtcagttatatatcccacgttgaatagaaaagtggagtttgaacactttataa 9620387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 400 - 466
Target Start/End: Original strand, 41972151 - 41972217
Alignment:
Q  400 tgttgtgtgtaagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataa 466  Q
    ||||||||| |||||| ||||||||||||||||||| ||||||||||  ||||||||||| ||||||    
T  41972151 tgttgtgtgcaagtgtgagttatatgtcccacatcggatagaaaagtaaaggttgaacaccttataa 41972217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 376 - 456
Target Start/End: Original strand, 6731872 - 6731953
Alignment:
Q  376 gatggactcacatttgagggggagtgttg-tgtgtaagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaa 456  Q
    ||||||||||||||||||||||||||||| | || |||||| ||||||||||||||||||| ||| || |||  ||||||||    
T  6731872 gatggactcacatttgagggggagtgttgttttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaa 6731953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 324 - 435
Target Start/End: Complemental strand, 1014116 - 1014001
Alignment:
Q  324 aacgacgatacaagcaa-gtaagagcttccgctcgagggaggc--acgattaattgatggactcacatttgagggggagtgtt-gtgtgtaagtgtaagt 419  Q
    |||||||||||| |||| ||||||||||||||| || || ||   | ||| |||||||||||||||| ||||||||||||||| || || |||||| |||    
T  1014116 aacgacgatacatgcaaagtaagagcttccgcttgaagggggagtatgatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagt 1014017  T
Q  420 tatatgtcccacatcg 435  Q
    ||||||| ||||||||    
T  1014016 tatatgttccacatcg 1014001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 163 - 340
Target Start/End: Original strand, 3669771 - 3669952
Alignment:
Q  163 ccttaaggttttgggtaagtgtgtgatgtctctctcgcttatgc------tctagcctcaatgtgggtggtcaccctggctcccctcaatgacacaatag 256  Q
    ||||||||||||||||||| ||||| ||||||||| |||| |||      ||||||||| |||||| ||||| |||| |||||||||  |||| |||  |    
T  3669771 ccttaaggttttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggatggtccccctagctcccctcg-tgacccaacgg 3669869  T
Q  257 tggtatcagagccctgctacgacgaagggtaggaccgaggcagccgatccgttgtggagaaaccagcaacgacgatacaagcaa 340  Q
    ||||||||||||||  || | | |||||||| || ||||||||||| | ||||| | ||||| | ||||| ||| |||||||||    
T  3669870 tggtatcagagccccccttcaatgaagggtacgatcgaggcagccggt-cgttgcgcagaaagccgcaacaacggtacaagcaa 3669952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 78 - 146
Target Start/End: Complemental strand, 9620455 - 9620387
Alignment:
Q  78 attgttgtgtgtaagtgtcagttatatgtctcacattgtatagaaaagtggaggttgaacaatttataa 146  Q
    ||||||||||| ||||||||||||||| || ||| ||| |||||||||||||| ||||||| |||||||    
T  9620455 attgttgtgtgcaagtgtcagttatatatcccacgttgaatagaaaagtggagtttgaacactttataa 9620387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 289 - 466
Target Start/End: Complemental strand, 18372980 - 18372798
Alignment:
Q  289 gaccgaggcagccgatccgtt-gtggagaaaccagcaacgacgatacaagcaagtaa-gagcttccgc--tcgagggag-gcacgattaattgatggact 383  Q
    |||||||||||||  |||||| | ||||||||||||| || |||||||| ||| ||| |||||||| |  || |||| | ||||||| || |||||||||    
T  18372980 gaccgaggcagccagtccgtttgcggagaaaccagcagcggcgatacaaacaaataaagagcttcccccttcaagggggagcacgataaagtgatggact 18372881  T
Q  384 cacatttgagggggagtgttgt-gtgtaagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataa 466  Q
    |||| |||||| | |||||||| ||| |||||| ||||||||||| ||||||| ||| || |||  ||||||||||| ||||||    
T  18372880 cacacttgaggag-agtgttgttgtgaaagtgtgagttatatgtcacacatcggataaaatagtaaaggttgaacaccttataa 18372798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 400 - 464
Target Start/End: Complemental strand, 20995566 - 20995502
Alignment:
Q  400 tgttgtgtgtaagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttat 464  Q
    ||||||||| |||||| ||||||||||| ||||||  ||| ||||||||||||||||||||||||    
T  20995566 tgttgtgtgcaagtgtgagttatatgtctcacatcagataaaaaagtggaggttgaacactttat 20995502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 372 - 466
Target Start/End: Original strand, 3670024 - 3670119
Alignment:
Q  372 aattgatggactcacatttgagggggagtgtt-gtgtgtaagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataa 466  Q
    |||||||||||||||| |||||||||| |||| || || |||||| ||||||||||||||||||| ||| || |||  ||||| ||||| ||||||    
T  3670024 aattgatggactcacacttgagggggactgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggtttaacaccttataa 3670119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 235 - 321
Target Start/End: Complemental strand, 18372279 - 18372194
Alignment:
Q  235 gctcccctcaatgacacaatagtggtatcagagccctgctacgacgaagggtaggaccgaggcagccgatccgttgt-ggagaaacca 321  Q
    |||||||||| |||| ||||||||||||||||||| || | |||| ||||||| ||||||||||||||||||||| | ||||||||||    
T  18372279 gctcccctca-tgacccaatagtggtatcagagcc-tggttcgacaaagggtacgaccgaggcagccgatccgttttcggagaaacca 18372194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 77 - 198
Target Start/End: Complemental strand, 4154448 - 4154320
Alignment:
Q  77 aattgttgtgtgtaagtgtcagttatatgtctcacattgtatagaaaagtggaggttgaacaatttataattgaga-------agacctatttccttaag 169  Q
    |||||||||||| || ||| |||||||||||  ||||   |||||||||||||||||||||| ||||||| |||||       | ||  ||| ||||||     
T  4154448 aattgttgtgtgcaaatgtgagttatatgtcctacatcagatagaaaagtggaggttgaacactttataagtgagagacccataaactcattgccttaat 4154349  T
Q  170 gttttgggtaagtgtgtgatgtctctctc 198  Q
     ||||||||||||||||||||||||||||    
T  4154348 attttgggtaagtgtgtgatgtctctctc 4154320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 80 - 146
Target Start/End: Complemental strand, 4154831 - 4154765
Alignment:
Q  80 tgttgtgtgtaagtgtcagttatatgtctcacattgtatagaaaagtggaggttgaacaatttataa 146  Q
    ||||||||| |||||| ||||||||||| |||||   |||||||||||||||||||||| |||||||    
T  4154831 tgttgtgtgcaagtgtgagttatatgtcccacatctgatagaaaagtggaggttgaacactttataa 4154765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 400 - 466
Target Start/End: Original strand, 9608738 - 9608804
Alignment:
Q  400 tgttgtgtgtaagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataa 466  Q
    ||||||||| |||||| |||||||||||||| |||| ||||||||||  ||||||||||| ||||||    
T  9608738 tgttgtgtgcaagtgtgagttatatgtcccatatcggatagaaaagtaaaggttgaacaccttataa 9608804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 80 - 144
Target Start/End: Complemental strand, 20995566 - 20995502
Alignment:
Q  80 tgttgtgtgtaagtgtcagttatatgtctcacattgtatagaaaagtggaggttgaacaatttat 144  Q
    ||||||||| |||||| |||||||||||||||||   ||| |||||||||||||||||| |||||    
T  20995566 tgttgtgtgcaagtgtgagttatatgtctcacatcagataaaaaagtggaggttgaacactttat 20995502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 80 - 160
Target Start/End: Original strand, 33831971 - 33832051
Alignment:
Q  80 tgttgtgtgtaagtgtcagttatatgtctcacattgtatagaaaagtggaggttgaacaatttataattgagaagacctat 160  Q
    ||||||||| |||||| ||||||||||||||| ||| | |||||||| || |||||||| ||||||| | ||| |||||||    
T  33831971 tgttgtgtgcaagtgtgagttatatgtctcacgttgaagagaaaagtagaagttgaacactttataagtaagaggacctat 33832051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 475 - 515
Target Start/End: Complemental strand, 45122139 - 45122099
Alignment:
Q  475 actcattttcttaaggtttcgggtaagagtgtggtgtctct 515  Q
    ||||||||||||||||||| |||||||||||||||||||||    
T  45122139 actcattttcttaaggttttgggtaagagtgtggtgtctct 45122099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 155 - 202
Target Start/End: Original strand, 3670136 - 3670183
Alignment:
Q  155 acctatttccttaaggttttgggtaagtgtgtgatgtctctctcgctt 202  Q
    ||||||||||||||||||||||||||| ||||| ||||||||| ||||    
T  3670136 acctatttccttaaggttttgggtaagagtgtggtgtctctcttgctt 3670183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 400 - 466
Target Start/End: Original strand, 147444 - 147510
Alignment:
Q  400 tgttgtgtgtaagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataa 466  Q
    ||||| |||||||||| ||||||||||||||||||| ||| || |||  ||||||||||| ||||||    
T  147444 tgttgcgtgtaagtgtgagttatatgtcccacatcggataaaagagtaaaggttgaacaccttataa 147510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 79 - 197
Target Start/End: Original strand, 147821 - 147938
Alignment:
Q  79 ttgttgtgtgtaagtgtcagttatatgtctcacattgtatagaaaagtggaggttgaacaatttataattgagaagacctatttccttaaggttttgggt 178  Q
    |||||||||| |||||| ||||||||||| |||||   ||| ||||||  | |||||||||  |||||   | || ||||||| ||||||||||||||||    
T  147821 ttgttgtgtgcaagtgtgagttatatgtcccacatctgataaaaaagtaaatgttgaacaacatataacccataa-acctattgccttaaggttttgggt 147919  T
Q  179 aagtgtgtgatgtctctct 197  Q
    ||| ||||| |||||||||    
T  147920 aagagtgtggtgtctctct 147938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 400 - 466
Target Start/End: Complemental strand, 3038455 - 3038389
Alignment:
Q  400 tgttgtgtgtaagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataa 466  Q
    ||||||||  |||||| ||||||||||||||||||| ||| || |||  ||||||||||||||||||    
T  3038455 tgttgtgtacaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacactttataa 3038389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 400 - 466
Target Start/End: Original strand, 33831971 - 33832037
Alignment:
Q  400 tgttgtgtgtaagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataa 466  Q
    ||||||||| |||||| ||||||||||| ||| | ||| |||||||| || ||||||||||||||||    
T  33831971 tgttgtgtgcaagtgtgagttatatgtctcacgttgaagagaaaagtagaagttgaacactttataa 33832037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 405 - 466
Target Start/End: Complemental strand, 45122070 - 45122009
Alignment:
Q  405 tgtgtaagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataa 466  Q
    |||| |||||| ||||||||||||||||||| ||| || |||  ||||||||||||||||||    
T  45122070 tgtgcaagtgtgagttatatgtcccacatcgcataaaatagtaaaggttgaacactttataa 45122009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 163 - 339
Target Start/End: Complemental strand, 1014319 - 1014138
Alignment:
Q  163 ccttaaggttttgggtaagtgtgtgatgtctctctcgcttatgc------tctagcctcaatgtgggtggtcaccctg-gctcccctcaatgacacaata 255  Q
    |||||| |||||||||||| ||||| ||||||||  |||| |||      ||||||||| |||||| ||||  ||| | ||||||| || ||| |||| |    
T  1014319 ccttaaagttttgggtaagagtgtggtgtctctcctgcttgtgcggttgttctagcctcgatgtggatggttcccccgagctcccc-cagtgatacaaca 1014221  T
Q  256 gtggtatcagagccctgctacgacgaagggtaggaccgaggcagccgatccgttgtggagaaaccagcaacgacgatacaagca 339  Q
    ||||||||||||||| | | |||||||||||| ||| |||||||||| | ||||| | ||||| | |||||| || ||||||||    
T  1014220 gtggtatcagagccccggttcgacgaagggtacgactgaggcagccggt-cgttgcgcagaaagccgcaacggcggtacaagca 1014138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 364 - 466
Target Start/End: Complemental strand, 18373134 - 18373030
Alignment:
Q  364 gcacgattaattgatggactcacatttgagggggagtgttg-tgtgta-agtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactt 461  Q
    ||||||| || ||||||||||||| |||||  ||||||||| |||||| ||||| | ||||||||||||| ||| ||| || |||  ||||||||||| |    
T  18373134 gcacgataaagtgatggactcacacttgagatggagtgttgttgtgtacagtgtgatttatatgtcccacttcggataaaatagtaaaggttgaacacct 18373035  T
Q  462 tataa 466  Q
    |||||    
T  18373034 tataa 18373030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 400 - 466
Target Start/End: Complemental strand, 6877028 - 6876961
Alignment:
Q  400 tgttgtgtgtaagtgtaagttatat-gtcccacatcgaatagaaaagtggaggttgaacactttataa 466  Q
    ||||||||| |||||| |||||||| ||||||||||| ||| ||||||  ||||||||||| ||||||    
T  6877028 tgttgtgtgcaagtgtgagttatatagtcccacatcggataaaaaagtaaaggttgaacaccttataa 6876961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 372 - 431
Target Start/End: Original strand, 34835436 - 34835498
Alignment:
Q  372 aattgatggactcacatttgagggggagtgttg-tgtgt--aagtgtaagttatatgtcccac 431  Q
    |||||||||||||||| |||||||||||||||| |||||  ||| || |||||||||||||||    
T  34835436 aattgatggactcacacttgagggggagtgttgctgtgtacaagggtgagttatatgtcccac 34835498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 372 - 431
Target Start/End: Original strand, 34835702 - 34835764
Alignment:
Q  372 aattgatggactcacatttgagggggagtgttg-tgtgt--aagtgtaagttatatgtcccac 431  Q
    |||||||||||||||| |||||||||||||||| |||||  ||| || |||||||||||||||    
T  34835702 aattgatggactcacacttgagggggagtgttgctgtgtacaagggtgagttatatgtcccac 34835764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 478 - 516
Target Start/End: Complemental strand, 9483266 - 9483228
Alignment:
Q  478 cattttcttaaggtttcgggtaagagtgtggtgtctctt 516  Q
    |||| ||||||||||| ||||||||||||||||||||||    
T  9483266 cattgtcttaaggttttgggtaagagtgtggtgtctctt 9483228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 400 - 466
Target Start/End: Complemental strand, 9620841 - 9620775
Alignment:
Q  400 tgttgtgtgtaagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataa 466  Q
    ||||||||| |||||| ||||||||||| |||| |  |||||||||| || ||||| ||||||||||    
T  9620841 tgttgtgtgcaagtgtgagttatatgtctcacaacagatagaaaagtagaagttgatcactttataa 9620775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 80 - 138
Target Start/End: Original strand, 41972151 - 41972209
Alignment:
Q  80 tgttgtgtgtaagtgtcagttatatgtctcacattgtatagaaaagtggaggttgaaca 138  Q
    ||||||||| |||||| ||||||||||| ||||| | ||||||||||  ||||||||||    
T  41972151 tgttgtgtgcaagtgtgagttatatgtcccacatcggatagaaaagtaaaggttgaaca 41972209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 80 - 157
Target Start/End: Complemental strand, 9620841 - 9620764
Alignment:
Q  80 tgttgtgtgtaagtgtcagttatatgtctcacattgtatagaaaagtggaggttgaacaatttataattgagaagacc 157  Q
    ||||||||| |||||| ||||||||||||||||    |||||||||| || ||||| || ||||||| ||||| ||||    
T  9620841 tgttgtgtgcaagtgtgagttatatgtctcacaacagatagaaaagtagaagttgatcactttataagtgagaggacc 9620764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 429 - 466
Target Start/End: Complemental strand, 34219269 - 34219232
Alignment:
Q  429 cacatcgaatagaaaagtggaggttgaacactttataa 466  Q
    |||||||  |||||||||||||||||||||||||||||    
T  34219269 cacatcggttagaaaagtggaggttgaacactttataa 34219232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 475 - 515
Target Start/End: Original strand, 3669763 - 3669803
Alignment:
Q  475 actcattttcttaaggtttcgggtaagagtgtggtgtctct 515  Q
    |||||||  |||||||||| |||||||||||||||||||||    
T  3669763 actcattgccttaaggttttgggtaagagtgtggtgtctct 3669803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 402 - 466
Target Start/End: Original strand, 5274770 - 5274834
Alignment:
Q  402 ttgtgtgtaagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataa 466  Q
    ||||||| |||| | |||||||||| | |||| ||||| |||||  |||||||||||||||||||    
T  5274770 ttgtgtgcaagtatgagttatatgttctacattgaataaaaaaggagaggttgaacactttataa 5274834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 475 - 515
Target Start/End: Original strand, 5915943 - 5915983
Alignment:
Q  475 actcattttcttaaggtttcgggtaagagtgtggtgtctct 515  Q
    |||||||  |||||||||| |||||||||||||||||||||    
T  5915943 actcattgccttaaggttttgggtaagagtgtggtgtctct 5915983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 475 - 515
Target Start/End: Original strand, 34834952 - 34834992
Alignment:
Q  475 actcattttcttaaggtttcgggtaagagtgtggtgtctct 515  Q
    |||||||  |||||||||| |||||||||||||||||||||    
T  34834952 actcattgccttaaggttttgggtaagagtgtggtgtctct 34834992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 438 - 466
Target Start/End: Complemental strand, 40417646 - 40417618
Alignment:
Q  438 tagaaaagtggaggttgaacactttataa 466  Q
    |||||||||||||||||||||||||||||    
T  40417646 tagaaaagtggaggttgaacactttataa 40417618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 410 - 466
Target Start/End: Original strand, 40991756 - 40991812
Alignment:
Q  410 aagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataa 466  Q
    |||||| ||||| | ||||||||| |  |||||||||||||||||||||||| ||||    
T  40991756 aagtgtgagttagaagtcccacattgcttagaaaagtggaggttgaacacttcataa 40991812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 402 - 466
Target Start/End: Complemental strand, 45122220 - 45122156
Alignment:
Q  402 ttgtgtgtaagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataa 466  Q
    ||||||| |||||| ||||||||||| ||||||| ||| || |||  ||||||||||| ||||||    
T  45122220 ttgtgtgcaagtgtgagttatatgtctcacatcggataaaatagtaaaggttgaacaccttataa 45122156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 80; Significance: 3e-37; HSPs: 48)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 79 - 466
Target Start/End: Complemental strand, 37991143 - 37990738
Alignment:
Q  79 ttgttgtgtgtaagtgtcagttatatgtctcacattgtatagaaaagtggaggttgaacaatttataattgagaagacctattt--------ccttaagg 170  Q
    |||||||||  |||||| ||||||||||||||||||| ||| || |||  ||||||||||  |||||| | ||| |||||||          ||||||||    
T  37991143 ttgttgtgtacaagtgtgagttatatgtctcacattggataaaatagtaaaggttgaacaccttataagtaagaggacctataaactcatcgccttaagg 37991044  T
Q  171 ttttgggtaagtgtgtgatgtctctctcgcttatgc------tctagcctcaatgtgggtggtcaccctggctcccctcaatgacacaatagtggtatca 264  Q
    ||||||||||| ||||| ||||||||| |||||||       ||||||||| ||||||  |||| | | ||||||||   ||||| ||| ||||||||||    
T  37991043 ttttgggtaagagtgtggtgtctctcttgcttatgtggttgttctagcctcgatgtggacggtccctcaggctccccctcatgacccaacagtggtatca 37990944  T
Q  265 gagccctgctacgacgaagggtaggaccgaggcagccgatccgtt-gtggagaaaccagcaacgacgatacaagcaa-gtaagagcttccgctcgaggga 362  Q
    | ||||   | |||| ||||||| || ||||||||||| | |||| | | |||||||||||||| ||||||| |||| |||| |||||||||| |||||     
T  37990943 gggccccatt-cgacaaagggtacgatcgaggcagccggttcgtttgcgcagaaaccagcaacggcgatacatgcaaagtaaaagcttccgcttgagggg 37990845  T
Q  363 ggcacgattaattgatggactcacatttgagggggagtgttg-tgtgt--aagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacac 459  Q
    |||| ||| |||||||||||||||| |||||||||||||||| |||||  |||||| |||||||||| |||||||| ||| || |||  | |||||||||    
T  37990844 ggcatgatgaattgatggactcacagttgagggggagtgttgttgtgtacaagtgtgagttatatgttccacatcggataaaatagtaaatgttgaacac 37990745  T
Q  460 tttataa 466  Q
     ||||||    
T  37990744 cttataa 37990738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 236 - 439
Target Start/End: Original strand, 15773017 - 15773224
Alignment:
Q  236 ctcccctcaatgacacaatagtggtatcagagccctgctacgacgaagggtaggaccgaggcagccgatccgttgtggagaaaccagcaacgacgataca 335  Q
    ||||||||| |||| ||| |||||||||||||||||| | |||||||||||| || |||||| |||| || ||| || ||||| |||||||  |||||||    
T  15773017 ctcccctca-tgacccaacagtggtatcagagccctgattcgacgaagggtacgatcgaggccgccggtcagttatgcagaaagcagcaacagcgataca 15773115  T
Q  336 agcaagt-aagagcttccgctcgagggag-gcacgattaattgatggactcacatttgagggggag---tgttgtgtgtaagtgtaagttatatgtccca 430  Q
    ||||||| || |||||||||||  ||| | ||||||| || ||||||||||||| |||||||||||   ||||||||| |||||| ||||||||||||||    
T  15773116 agcaagtaaaaagcttccgctcttgggggagcacgataaagtgatggactcacacttgagggggagtgttgttgtgtgcaagtgtgagttatatgtccca 15773215  T
Q  431 catcgaata 439  Q
    |||||||||    
T  15773216 catcgaata 15773224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 304 - 466
Target Start/End: Complemental strand, 21832605 - 21832442
Alignment:
Q  304 tccgttgtggagaaaccagcaacgacgatacaagcaagtaagagcttccgctcgagggag-gcacgattaattgatggactcacatttgagggggagtgt 402  Q
    ||||||| |||||||||||||||||||||||||||||||| ||||||||  | || || | ||| ||| ||| |||||||||||| |||||| |||||||    
T  21832605 tccgttgcggagaaaccagcaacgacgatacaagcaagtatgagcttccatttgatggggagcatgatgaatagatggactcacacttgaggcggagtgt 21832506  T
Q  403 tgtgtgtaagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataa 466  Q
    | |||| |||||| ||||||||||||||||| | ||||||||||  ||||||||||| ||||||    
T  21832505 tatgtgcaagtgtgagttatatgtcccacattggatagaaaagtaaaggttgaacaccttataa 21832442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 281 - 446
Target Start/End: Original strand, 9240020 - 9240188
Alignment:
Q  281 aagggtaggaccgaggcagccgatccgttgtggagaaaccagcaacgacgatacaa-gcaagtaagagcttccgctcgaggg-ag-gcacgattaattga 377  Q
    ||||||| || |||||||| |  ||||||| | ||||| ||||||||| ||||||| ||||||||||| ||||||| ||||| || |||  |  ||| ||    
T  9240020 aagggtacgatcgaggcagtcagtccgttgcgcagaaagcagcaacgatgatacaaagcaagtaagagtttccgcttgaggggagagcataacgaatgga 9240119  T
Q  378 tggactcacatttgagggggagtgttgtgtgtaagtgtaagttatatgtcccacatcgaatagaaaagt 446  Q
    |||||||||| |||||| ||||||||||||| |||||| |||||||||| |||||||| ||||| ||||    
T  9240120 tggactcacacttgaggaggagtgttgtgtgcaagtgtgagttatatgttccacatcggatagagaagt 9240188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 324 - 466
Target Start/End: Original strand, 22304482 - 22304628
Alignment:
Q  324 aacgacgatacaagcaa-gtaagagcttccgctcgagggagg--cacgattaattgatggactcacatttgagggggagtgtt-gtgtgtaagtgtaagt 419  Q
    ||||||||||||||||| ||||||||||||||| || || ||  || ||| ||| |||||||||||| ||||||||||||||| || || |||||| ||     
T  22304482 aacgacgatacaagcaaagtaagagcttccgcttgaagggggagcatgatgaatagatggactcacacttgagggggagtgttggtttgcaagtgtgagc 22304581  T
Q  420 tatatgtcccacatcgaatagaaaagtggaggttgaacactttataa 466  Q
    |||||||||||||||| ||| || |||  |||||||| || ||||||    
T  22304582 tatatgtcccacatcggataaaatagtaaaggttgaataccttataa 22304628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 312 - 466
Target Start/End: Complemental strand, 54018074 - 54017915
Alignment:
Q  312 ggagaaaccagcaacgacgatacaagcaagtaa-gagcttccgctcgagggagg-cacgattaattgatggactcacatttgagggggagt---gttgtg 406  Q
    |||||||||| ||||   ||||||||||||||| ||||||||||| ||||| |  || ||| ||  |||||||||||| ||||||||||||   ||||||    
T  54018074 ggagaaaccaacaacagtgatacaagcaagtaaagagcttccgcttgagggggaacatgatgaaaagatggactcacacttgagggggagtattgttgtg 54017975  T
Q  407 tgtaagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataa 466  Q
    || |||||| |||||||||||| |||||| ||| || |||  ||||||||||| ||||||    
T  54017974 tgcaagtgtgagttatatgtcctacatcggataaaagagtaaaggttgaacaccttataa 54017915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 372 - 459
Target Start/End: Original strand, 22304210 - 22304298
Alignment:
Q  372 aattgatggactcacatttgagggggagtgtt-gtgtgtaagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacac 459  Q
    |||||||||||||||| ||||||||||||||| || || |||||| ||||||||||||||||||| ||| || |||  |||||||||||    
T  22304210 aattgatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 22304298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 402 - 466
Target Start/End: Complemental strand, 39336392 - 39336328
Alignment:
Q  402 ttgtgtgtaagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataa 466  Q
    ||||||| |||||| ||||||||||||||||||| |||||||  |||||||||||||||||||||    
T  39336392 ttgtgtgcaagtgtgagttatatgtcccacatcggatagaaagttggaggttgaacactttataa 39336328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 400 - 515
Target Start/End: Original strand, 31190010 - 31190125
Alignment:
Q  400 tgttgtgtgtaagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataattgacatgactcattttcttaaggtttcgggta 499  Q
    ||||||||| |||||| ||| ||||||||||||||| ||| || |||  ||||||||||| |||||| | | | ||| |||   |||||||||| |||||    
T  31190010 tgttgtgtgcaagtgtgagtgatatgtcccacatcggataaaagagtaaaggttgaacaccttataagttagaggacccatagccttaaggttttgggta 31190109  T
Q  500 agagtgtggtgtctct 515  Q
    ||||||||||||||||    
T  31190110 agagtgtggtgtctct 31190125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 338 - 438
Target Start/End: Complemental strand, 32462791 - 32462686
Alignment:
Q  338 caagtaagagcttccgctcgagggagg--cacgattaattgatggactcacatttgagggggagtgttg-tgtgt--aagtgtaagttatatgtcccaca 432  Q
    ||||||||||||| |||| || || ||  || ||| |||||||||||||||| |||||||||||||||| |||||  |||||| ||||||||||||||||    
T  32462791 caagtaagagctttcgcttgaagggggagcatgatgaattgatggactcacacttgagggggagtgttgttgtgtacaagtgtgagttatatgtcccaca 32462692  T
Q  433 tcgaat 438  Q
    ||||||    
T  32462691 tcgaat 32462686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 400 - 466
Target Start/End: Complemental strand, 12114727 - 12114661
Alignment:
Q  400 tgttgtgtgtaagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataa 466  Q
    ||||||||| ||||||||||||||| |||||||||| ||||||||||  ||||||||||| ||||||    
T  12114727 tgttgtgtgcaagtgtaagttatatatcccacatcggatagaaaagtaaaggttgaacaccttataa 12114661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 400 - 466
Target Start/End: Complemental strand, 46546490 - 46546424
Alignment:
Q  400 tgttgtgtgtaagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataa 466  Q
    |||||||||||||||| |||||||||||| |||| | || |||| ||||||||||||||||||||||    
T  46546490 tgttgtgtgtaagtgtgagttatatgtcctacattggattgaaatgtggaggttgaacactttataa 46546424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 388 - 466
Target Start/End: Complemental strand, 47964695 - 47964617
Alignment:
Q  388 tttgagggggagtgttgtgtgtaagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataa 466  Q
    |||||||| |||||||||||| |||||| |||| |||||||| ||||| ||||||| ||||||||||||| || |||||    
T  47964695 tttgagggcgagtgttgtgtgcaagtgtgagttgtatgtcccgcatcggatagaaatgtggaggttgaacgctatataa 47964617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 372 - 457
Target Start/End: Original strand, 2299939 - 2300026
Alignment:
Q  372 aattgatggactcacatttgagggggag--tgttgtgtgtaagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaac 457  Q
    |||||||||||||||| ||||||||||   ||||||||| ||||||  |||||||||||||| ||  |||||||||||||||| ||||    
T  2299939 aattgatggactcacacttgagggggatattgttgtgtgcaagtgtgggttatatgtcccacgtcagatagaaaagtggaggtagaac 2300026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 207 - 302
Target Start/End: Original strand, 22304327 - 22304423
Alignment:
Q  207 tctagcctcaatgtgggtggtcaccctggct-cccctcaatgacacaatagtggtatcagagccctgctacgacgaagggtaggaccgaggcagccg 302  Q
    ||||||||| ||||||  |||| |||| ||| ||||||| |||| ||| |||||||||||||||| | | |||||||||||| ||||||||||||||    
T  22304327 tctagcctcgatgtggacggtccccctagcttcccctcactgacccaacagtggtatcagagccccggttcgacgaagggtacgaccgaggcagccg 22304423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 412 - 500
Target Start/End: Complemental strand, 36986101 - 36986013
Alignment:
Q  412 gtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataattgacatgactcattttcttaaggtttcgggtaa 500  Q
    |||| ||||||||||||||||||||||||||||||| |||||||  ||||||||| ||| |  |||||||  || ||||||| ||||||    
T  36986101 gtgtgagttatatgtcccacatcgaatagaaaagtgaaggttgagaactttataagtgagagaactcattgcctcaaggtttagggtaa 36986013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 412 - 500
Target Start/End: Complemental strand, 37011540 - 37011452
Alignment:
Q  412 gtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataattgacatgactcattttcttaaggtttcgggtaa 500  Q
    |||| ||||||||||||||||||||||||||||||| |||||||  ||||||||| ||| |  |||||||  || ||||||| ||||||    
T  37011540 gtgtgagttatatgtcccacatcgaatagaaaagtgaaggttgagaactttataagtgagagaactcattgcctcaaggtttagggtaa 37011452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 403 - 466
Target Start/End: Complemental strand, 7767476 - 7767413
Alignment:
Q  403 tgtgtgtaagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataa 466  Q
    ||||||||||| | ||||||||||||||||||| ||||||||||  |||||| |||||||||||    
T  7767476 tgtgtgtaagtctgagttatatgtcccacatcggatagaaaagtaaaggttggacactttataa 7767413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 312 - 355
Target Start/End: Original strand, 8328176 - 8328219
Alignment:
Q  312 ggagaaaccagcaacgacgatacaagcaagtaagagcttccgct 355  Q
    |||||||||||||||| |||||||||||||||||||||||||||    
T  8328176 ggagaaaccagcaacggcgatacaagcaagtaagagcttccgct 8328219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 79 - 202
Target Start/End: Original strand, 31190009 - 31190132
Alignment:
Q  79 ttgttgtgtgtaagtgtcagttatatgtctcacattgtatagaaaagtggaggttgaacaatttataattgagaagacctatttccttaaggttttgggt 178  Q
    |||||||||| |||||| ||| ||||||| ||||| | ||| || |||  ||||||||||  |||||| | ||| |||| ||  ||||||||||||||||    
T  31190009 ttgttgtgtgcaagtgtgagtgatatgtcccacatcggataaaagagtaaaggttgaacaccttataagttagaggacccatagccttaaggttttgggt 31190108  T
Q  179 aagtgtgtgatgtctctctcgctt 202  Q
    ||| ||||| ||||||||| ||||    
T  31190109 aagagtgtggtgtctctcttgctt 31190132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 80 - 146
Target Start/End: Complemental strand, 46546490 - 46546424
Alignment:
Q  80 tgttgtgtgtaagtgtcagttatatgtctcacattgtatagaaaagtggaggttgaacaatttataa 146  Q
    |||||||||||||||| |||||||||||  |||||| || |||| |||||||||||||| |||||||    
T  46546490 tgttgtgtgtaagtgtgagttatatgtcctacattggattgaaatgtggaggttgaacactttataa 46546424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 312 - 466
Target Start/End: Complemental strand, 3135330 - 3135172
Alignment:
Q  312 ggagaaaccagcaacgacgatacaagcaagtaaga--gcttccgctcgagggag-gcacgattaattgatggactcacatttgagggggagtgttg--tg 406  Q
    ||||||||||||||||||||||||| |||||||    ||||||||| ||||| | ||||||| |||||||| ||||||| |||| || |||||||   ||    
T  3135330 ggagaaaccagcaacgacgatacaaacaagtaaagtggcttccgctagagggggagcacgatgaattgatg-actcacacttgatggtgagtgtttgttg 3135232  T
Q  407 tgtaagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataa 466  Q
    ||||   || ||||||||||||||||||| ||| || |||  | ||||||||| ||||||    
T  3135231 tgtacaagtgagttatatgtcccacatcggataaaatagtaaatgttgaacaccttataa 3135172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 400 - 464
Target Start/End: Complemental strand, 33809173 - 33809109
Alignment:
Q  400 tgttgtgtgtaagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttat 464  Q
    ||||||||| |||||||||||||||||||||||||  |||||||| || |  |||||||||||||    
T  33809173 tgttgtgtgcaagtgtaagttatatgtcccacatcagatagaaaattgcatattgaacactttat 33809109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 400 - 464
Target Start/End: Complemental strand, 54451341 - 54451277
Alignment:
Q  400 tgttgtgtgtaagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttat 464  Q
    ||||||||| |  ||| |||||||||||||||||| || |||||| |||||||||||||||||||    
T  54451341 tgttgtgtgcatatgtgagttatatgtcccacatcaaaaagaaaaatggaggttgaacactttat 54451277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 312 - 408
Target Start/End: Original strand, 8328281 - 8328378
Alignment:
Q  312 ggagaaaccagcaacgacgatacaagcaagtaagagcttccgctcga--gggaggcacgattaattgatggactcacatttgagggggagtgttgtgtg 408  Q
    |||||||||| |||||  |||||||||||||||||||||||||| ||  |||  |  ||||  ||||||||||||||| ||||||||| ||||||||||    
T  8328281 ggagaaaccaacaacggtgatacaagcaagtaagagcttccgcttgaagggggagatcgatgcattgatggactcacacttgaggggg-gtgttgtgtg 8328378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 400 - 447
Target Start/End: Complemental strand, 12747917 - 12747870
Alignment:
Q  400 tgttgtgtgtaagtgtaagttatatgtcccacatcgaatagaaaagtg 447  Q
    ||||||||| |||||| ||||||||||||||||||| |||||||||||    
T  12747917 tgttgtgtgcaagtgtgagttatatgtcccacatcggatagaaaagtg 12747870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 400 - 466
Target Start/End: Complemental strand, 29645067 - 29645001
Alignment:
Q  400 tgttgtgtgtaagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataa 466  Q
    ||||||||| |||||||||||||||||||||||||| ||| || |||  ||||| ||||| ||||||    
T  29645067 tgttgtgtgcaagtgtaagttatatgtcccacatcggataaaagagtaaaggttaaacaccttataa 29645001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 82 - 152
Target Start/End: Complemental strand, 39336392 - 39336322
Alignment:
Q  82 ttgtgtgtaagtgtcagttatatgtctcacattgtatagaaaagtggaggttgaacaatttataattgaga 152  Q
    ||||||| |||||| ||||||||||| ||||| | |||||||  ||||||||||||| ||||||| |||||    
T  39336392 ttgtgtgcaagtgtgagttatatgtcccacatcggatagaaagttggaggttgaacactttataagtgaga 39336322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 400 - 466
Target Start/End: Complemental strand, 45395818 - 45395752
Alignment:
Q  400 tgttgtgtgtaagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataa 466  Q
    ||||||||| ||||||||||||||| |||||||||||||| || |||  ||||| ||||| ||||||    
T  45395818 tgttgtgtgcaagtgtaagttatatatcccacatcgaataaaagagtaaaggttaaacacgttataa 45395752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 255 - 339
Target Start/End: Complemental strand, 22303931 - 22303847
Alignment:
Q  255 agtggtatcagagccctgctacgacgaagggtaggaccgaggcagccgatccgttgtggagaaaccagcaacgacgatacaagca 339  Q
    |||||||||||||||| | | |||||||||||  ||| ||||| |||| || |||| | ||||| ||||||||||| ||||||||    
T  22303931 agtggtatcagagccccggttcgacgaagggtgcgacagaggccgccggtcagttgcgcagaaagcagcaacgacggtacaagca 22303847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 80 - 152
Target Start/End: Complemental strand, 47965080 - 47965008
Alignment:
Q  80 tgttgtgtgtaagtgtcagttatatgtctcacattgtatagaaaagtggaggttgaacaatttataattgaga 152  Q
    ||||||||| |||||| |||||||||| | |||| | ||||||||||||||||| |||| | ||||| |||||    
T  47965080 tgttgtgtgcaagtgtgagttatatgttttacatcggatagaaaagtggaggttaaacattatataagtgaga 47965008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 163 - 202
Target Start/End: Complemental strand, 39336044 - 39336005
Alignment:
Q  163 ccttaaggttttgggtaagtgtgtgatgtctctctcgctt 202  Q
    ||||||||||||||||||| ||||| ||||||||||||||    
T  39336044 ccttaaggttttgggtaagagtgtggtgtctctctcgctt 39336005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 346 - 435
Target Start/End: Original strand, 4823593 - 4823683
Alignment:
Q  346 agcttccgctcgagggaggcacgattaattgatggactcacatttgagggggagtgtt-gtgtgtaagtgtaagttatatgtcccacatcg 435  Q
    ||||||||||| ||||  ||||| | || ||||||||||||| |||| |||||||||| || || |||||| ||||||| ||| |||||||    
T  4823593 agcttccgctctaggggagcacgttaaagtgatggactcacacttgaaggggagtgttggtttgcaagtgtgagttataagtctcacatcg 4823683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 80 - 138
Target Start/End: Complemental strand, 21832508 - 21832450
Alignment:
Q  80 tgttgtgtgtaagtgtcagttatatgtctcacattgtatagaaaagtggaggttgaaca 138  Q
    |||| |||| |||||| ||||||||||| ||||||| ||||||||||  ||||||||||    
T  21832508 tgttatgtgcaagtgtgagttatatgtcccacattggatagaaaagtaaaggttgaaca 21832450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 400 - 466
Target Start/End: Complemental strand, 33175829 - 33175763
Alignment:
Q  400 tgttgtgtgtaagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataa 466  Q
    ||||||||  |||||| ||||||||||| ||||||  ||||||||||  ||||||||||| ||||||    
T  33175829 tgttgtgtacaagtgtgagttatatgtctcacatcagatagaaaagtaaaggttgaacaccttataa 33175763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 400 - 466
Target Start/End: Original strand, 35946515 - 35946581
Alignment:
Q  400 tgttgtgtgtaagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataa 466  Q
    ||||||||  |||||| ||||||||||||||||||| ||| || |||  ||||||||||| ||||||    
T  35946515 tgttgtgtacaagtgtgagttatatgtcccacatcggataaaacagtaaaggttgaacaccttataa 35946581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 478 - 516
Target Start/End: Original strand, 39389149 - 39389187
Alignment:
Q  478 cattttcttaaggtttcgggtaagagtgtggtgtctctt 516  Q
    |||| ||||||||||| ||||||||||||||||||||||    
T  39389149 cattgtcttaaggttttgggtaagagtgtggtgtctctt 39389187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 400 - 466
Target Start/End: Original strand, 39914245 - 39914311
Alignment:
Q  400 tgttgtgtgtaagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataa 466  Q
    ||||||||| |||||| ||||||||||| ||||||  ||| || ||| |||||||||||| ||||||    
T  39914245 tgttgtgtgcaagtgtgagttatatgtctcacatcagataaaacagtagaggttgaacaccttataa 39914311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 400 - 458
Target Start/End: Complemental strand, 47965080 - 47965022
Alignment:
Q  400 tgttgtgtgtaagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaaca 458  Q
    ||||||||| |||||| ||||||||||   |||||| ||||||||||||||||| ||||    
T  47965080 tgttgtgtgcaagtgtgagttatatgttttacatcggatagaaaagtggaggttaaaca 47965022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 164 - 202
Target Start/End: Complemental strand, 50612520 - 50612482
Alignment:
Q  164 cttaaggttttgggtaagtgtgtgatgtctctctcgctt 202  Q
    |||||||||||||||||| ||||||||||||||| ||||    
T  50612520 cttaaggttttgggtaagagtgtgatgtctctcttgctt 50612482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 444
Target Start/End: Complemental strand, 1634477 - 1634436
Alignment:
Q  403 tgtgtgtaagtgtaagttatatgtcccacatcgaatagaaaa 444  Q
    |||||| |||||| ||||||||||||||||||| ||||||||    
T  1634477 tgtgtgcaagtgtgagttatatgtcccacatcggatagaaaa 1634436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 233 - 302
Target Start/End: Complemental strand, 3135100 - 3135033
Alignment:
Q  233 tggctcccctcaatgacacaatagtggtatcagagccctgctacgacgaagggtaggaccgaggcagccg 302  Q
    |||||||||||| |||| |||||||||||||||||| | | | |||| ||||||| ||||||||||||||    
T  3135100 tggctcccctca-tgacccaatagtggtatcagagcaccg-ttcgacaaagggtacgaccgaggcagccg 3135033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 78 - 127
Target Start/End: Complemental strand, 12747919 - 12747870
Alignment:
Q  78 attgttgtgtgtaagtgtcagttatatgtctcacattgtatagaaaagtg 127  Q
    ||||||||||| |||||| ||||||||||| ||||| | |||||||||||    
T  12747919 attgttgtgtgcaagtgtgagttatatgtcccacatcggatagaaaagtg 12747870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 373 - 434
Target Start/End: Complemental strand, 22304143 - 22304079
Alignment:
Q  373 attgatggactcacatttgagggggagtgttgt-gtgta--agtgtaagttatatgtcccacatc 434  Q
    ||||||||||||||| ||||||| || |||||| |||||  ||||| ||||||||||||||||||    
T  22304143 attgatggactcacacttgagggagaatgttgttgtgtacaagtgtgagttatatgtcccacatc 22304079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 405
Target Start/End: Complemental strand, 42342286 - 42342253
Alignment:
Q  372 aattgatggactcacatttgagggggagtgttgt 405  Q
    |||||||||||||||| |||||||||||||||||    
T  42342286 aattgatggactcacacttgagggggagtgttgt 42342253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 483 - 515
Target Start/End: Complemental strand, 12114636 - 12114604
Alignment:
Q  483 tcttaaggtttcgggtaagagtgtggtgtctct 515  Q
    ||||||||||| |||||||||||||||||||||    
T  12114636 tcttaaggttttgggtaagagtgtggtgtctct 12114604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 402 - 466
Target Start/End: Complemental strand, 29644744 - 29644680
Alignment:
Q  402 ttgtgtgtaagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataa 466  Q
    ||||||| |||||| ||||||||||||||||||| ||  || |||  ||||||||||| ||||||    
T  29644744 ttgtgtgcaagtgtgagttatatgtcccacatcggattaaagagtaaaggttgaacaccttataa 29644680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 475 - 515
Target Start/End: Complemental strand, 43346873 - 43346833
Alignment:
Q  475 actcattttcttaaggtttcgggtaagagtgtggtgtctct 515  Q
    |||||||  |||||||||| |||||||||||||||||||||    
T  43346873 actcattgccttaaggttttgggtaagagtgtggtgtctct 43346833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 80; Significance: 3e-37; HSPs: 57)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 311 - 466
Target Start/End: Complemental strand, 28531568 - 28531413
Alignment:
Q  311 tggagaaaccagcaacgacgatacaagcaagtaagagcttccgctcgagggaggcacgattaattgatggactcacatttgagggggagtgttgtgtgta 410  Q
    |||||||| || |||||||||||||||||||||| ||||||| || || ||  ||| ||| || ||||||||||||| |||||||||||||||||||| |    
T  28531568 tggagaaagcaacaacgacgatacaagcaagtaatagcttccacttgaagggagcatgatgaactgatggactcacacttgagggggagtgttgtgtgca 28531469  T
Q  411 agtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataa 466  Q
    ||||| ||||||||||||||||||| |||||||||   ||||||||||| ||||||    
T  28531468 agtgtgagttatatgtcccacatcggatagaaaagcaaaggttgaacaccttataa 28531413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 312 - 515
Target Start/End: Original strand, 7598511 - 7598717
Alignment:
Q  312 ggagaaaccagcaacgacgatacaagcaagtaa-gagcttccgctcga-gggaggcacgattaattgatggactcacatttgagggggagtgttg-tgtg 408  Q
    |||||||||| |||||||||||||||||||||| ||||||||||| || ||| |||| ||| ||| |||||||||||| ||||| |||||||||| ||||    
T  7598511 ggagaaaccaacaacgacgatacaagcaagtaaagagcttccgcttgaaggggggcatgatgaatagatggactcacacttgagagggagtgttggtgtg 7598610  T
Q  409 taagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataattgacatgactcattttcttaaggtttcgggtaagagtgtgg 508  Q
     |||||| ||||||||||||||||||  ||| ||||||  ||||||||||| |||||| | | | ||| |||   ||||| ||||  |||||||||||||    
T  7598611 caagtgtgagttatatgtcccacatcagataaaaaagtaaaggttgaacaccttataagtaagaggacccataaccttaacgtttttggtaagagtgtgg 7598710  T
Q  509 tgtctct 515  Q
    |||||||    
T  7598711 tgtctct 7598717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 304 - 466
Target Start/End: Original strand, 42514908 - 42515075
Alignment:
Q  304 tccgttgtggagaaaccagcaacgacgatacaagcaagtaagagcttccgctcgag-ggaggcacgattaattgatggactcacatttgagggggagtgt 402  Q
    ||||||| |||||||||||||||  ||||||||||||||||||||||||||| ||| ||  ||| ||| ||| |||||||||||||||||||||||||||    
T  42514908 tccgttgcggagaaaccagcaacagcgatacaagcaagtaagagcttccgcttgagagggagcatgatgaatagatggactcacatttgagggggagtgt 42515007  T
Q  403 tgtgtgtaagtgtaagtta----tatgtcccacatcgaatagaaaagtggaggttgaacactttataa 466  Q
    |||||| | |||| |||||    |||||||||||||| ||||||||||  ||||| ||||| ||||||    
T  42515008 tgtgtgcaggtgtgagttatatgtatgtcccacatcggatagaaaagtaaaggttaaacaccttataa 42515075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 313 - 464
Target Start/End: Complemental strand, 36785819 - 36785664
Alignment:
Q  313 gagaaaccagcaacgacgatacaagcaagtaagagcttccgctcgagggag-gcacgattaattgatggactcacatttgagggggag---tgttgtgtg 408  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||||| | ||| ||| |||||||||||||||| || ||||||||   |||||||||    
T  36785819 gagaaaccagcaacgacgatacaaccaagtaagagcttccgcttgagggggagcatgatgaattgatggactcacactttagggggagtgttgttgtgtg 36785720  T
Q  409 taagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttat 464  Q
     |||||| ||||||||||||||||||| ||| || |||  ||||||||||| ||||    
T  36785719 caagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttat 36785664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 277 - 466
Target Start/End: Complemental strand, 38796513 - 38796317
Alignment:
Q  277 gacgaagggtaggaccgaggcagccgatccgtt-gtggagaaaccagcaacgacgatacaagcaagtaagagcttccgctcga--gggaggcacgat-ta 372  Q
    ||||||||||| |||| ||||||||  |||||| | ||||||||||||||||||||||||||||||||||| |||||||| ||  |||  ||| |||  |    
T  38796513 gacgaagggtacgacctaggcagccagtccgtttgcggagaaaccagcaacgacgatacaagcaagtaagatcttccgcttgaagggggagcatgatgaa 38796414  T
Q  373 attgatggactcacatttgagggggag---tgttgtgtgtaagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataa 466  Q
    |  |||||||||||| |||||||||||   ||||||||| |||||| ||||||||||||||||||| ||| || |||  | ||||||||| ||||||    
T  38796413 aaagatggactcacacttgagggggagtgttgttgtgtgcaagtgtgagttatatgtcccacatcggataaaacagtaaatgttgaacaccttataa 38796317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 304 - 466
Target Start/End: Complemental strand, 40679887 - 40679728
Alignment:
Q  304 tccgttgtggagaaaccagcaacgacgatacaagcaagtaagagcttccgctcgagggag-gcacgattaattgatggactcacatttgagggggagtgt 402  Q
    ||||||| |||||||||||||||  | |||||||||||    |||||||||| ||||| | ||| ||| ||| |||||||||||| ||||||||||||||    
T  40679887 tccgttgcggagaaaccagcaactgcaatacaagcaag----agcttccgcttgagggggagcatgatgaatagatggactcacacttgagggggagtgt 40679792  T
Q  403 tgtgtgtaagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataa 466  Q
    |||||| || ||| |||||||||||||| |||| ||||||||||   |||||||||| ||||||    
T  40679791 tgtgtgcaaatgtgagttatatgtcccatatcggatagaaaagtaagggttgaacaccttataa 40679728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 207 - 401
Target Start/End: Complemental strand, 35580748 - 35580552
Alignment:
Q  207 tctagcctcaatgtgggtggtcaccctggctcccctcaatgacacaatagtggtatcagagccctgctacgacgaagggtaggaccgaggcag-ccgatc 305  Q
    ||||||||| ||||||  |||| ||||| |||||| ||||||| ||||| |||||||||||||| | | |||||||||||| ||||||||| | | | ||    
T  35580748 tctagcctcgatgtggacggtccccctgactcccc-caatgacccaataatggtatcagagccccggttcgacgaagggtatgaccgaggctgtcggctc 35580650  T
Q  306 cgttgtggagaaaccagcaacgacgatacaagcaagtaagagcttccgctcgagggag--gcacgattaattgatggactcacatttgagggggagtg 401  Q
      ||| |||||||||| ||||||| |||| ||||||||| ||||||| || || ||||  ||| ||| ||| |||||||||||| ||||||| |||||    
T  35580649 gtttgcggagaaaccaacaacgacaatacgagcaagtaaaagcttccccttgaaggaggagcatgatgaatagatggactcacacttgagggagagtg 35580552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 367 - 466
Target Start/End: Complemental strand, 33561649 - 33561550
Alignment:
Q  367 cgattaattgatggactcacatttgagggggagtgttgtgtgtaagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataa 466  Q
    |||| ||||||||||| | || |||| ||||| ||||||||| |||||| |||||||||| |||||||  ||||||||||||||||| ||||||||||||    
T  33561649 cgatgaattgatggacacgcacttgatggggaatgttgtgtgcaagtgtgagttatatgttccacatcagatagaaaagtggaggttaaacactttataa 33561550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 371 - 466
Target Start/End: Complemental strand, 29873733 - 29873636
Alignment:
Q  371 taattgatggactcacatttgagggggag--tgttgtgtgtaagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataa 466  Q
    ||||||||||||||||| |||||||||||  ||||||||| ||| ||  |||| ||||||||||||  |||||||||||||||||||||| |||||||    
T  29873733 taattgatggactcacacttgagggggagattgttgtgtgcaagggtgtgttacatgtcccacatcagatagaaaagtggaggttgaacattttataa 29873636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 372 - 463
Target Start/End: Original strand, 30323427 - 30323520
Alignment:
Q  372 aattgatggactcacatttgagggggag--tgttgtgtgtaagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacacttta 463  Q
    |||||||||||||||| |||||||||||  ||||||||| ||||||  ||||||||||||| |||  |||||||| ||||||||||||||||||    
T  30323427 aattgatggactcacacttgagggggagattgttgtgtgcaagtgtgtgttatatgtcccaaatcagatagaaaattggaggttgaacacttta 30323520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 388 - 466
Target Start/End: Complemental strand, 33953948 - 33953870
Alignment:
Q  388 tttgagggggagtgttgtgtgtaagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataa 466  Q
    ||||||||||||||||||||| || ||| ||||||| ||||||||||  |||||||||||||||||||||||| |||||    
T  33953948 tttgagggggagtgttgtgtgcaaatgtgagttataagtcccacatcagatagaaaagtggaggttgaacactatataa 33953870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 372 - 466
Target Start/End: Complemental strand, 41678562 - 41678466
Alignment:
Q  372 aattgatggactcacatttgagggggagtgttgtgtgtaagtgtaagt--tatatgtcccacatcgaatagaaaagtggaggttgaacactttataa 466  Q
    |||||||||||||||| |||| ||||||||||||||| |||||| |||  |||||||| ||||||  ||||||||| ||||||| ||||||||||||    
T  41678562 aattgatggactcacacttgaaggggagtgttgtgtgcaagtgtgagttatatatgtctcacatcagatagaaaaggggaggttaaacactttataa 41678466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 339 - 466
Target Start/End: Complemental strand, 5542854 - 5542724
Alignment:
Q  339 aagtaagagcttccgctcga--gggaggcacgattaattgatggactcacatttgagggggagtgttg-tgtgtaagtgtaagttatatgtcccacatcg 435  Q
    |||| |||||||||||| ||  |||| ||| ||| ||| |||||||||||| |||||||||||||||| | || |||||| |||||||||||||| ||||    
T  5542854 aagttagagcttccgcttgaaggggaagcatgatgaatagatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccatatcg 5542755  T
Q  436 aatagaaaagtggaggttgaacactttataa 466  Q
    |||| || |||  ||||||||||| ||||||    
T  5542754 aataaaatagtaaaggttgaacaccttataa 5542724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 312 - 433
Target Start/End: Original strand, 3672984 - 3673111
Alignment:
Q  312 ggagaaaccagcaacgacgatacaagcaa-gtaagagcttccgctcga---gggaggcacgattaattgatggactcacatttgagggggag---tgttg 404  Q
    |||||||||||||||||| ||||| |||| |||| |||||||||| ||   ||||| || ||| |||||||||||||||| |||||| ||||   |||||    
T  3672984 ggagaaaccagcaacgacaatacatgcaaagtaaaagcttccgcttgaagagggag-catgatgaattgatggactcacacttgaggaggagtgttgttg 3673082  T
Q  405 tgtgtaagtgtaagttatatgtcccacat 433  Q
    |||| |||||| |||||||||||||||||    
T  3673083 tgtgcaagtgtgagttatatgtcccacat 3673111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 372 - 461
Target Start/End: Original strand, 30313141 - 30313232
Alignment:
Q  372 aattgatggactcacatttgagggggag--tgttgtgtgtaagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactt 461  Q
    ||||| |||||||||| |||||||| ||  ||||||||| ||| ||  |||||||||| ||||||| |||||||||||||||||||||||||    
T  30313141 aattgttggactcacacttgaggggaagattgttgtgtgcaagcgtgtgttatatgtctcacatcggatagaaaagtggaggttgaacactt 30313232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 418 - 469
Target Start/End: Complemental strand, 29874170 - 29874119
Alignment:
Q  418 gttatatgtcccacatcgaatagaaaagtggaggttgaacactttataattg 469  Q
    |||||||||||||||||  |||||||||||||||||||||||||||||||||    
T  29874170 gttatatgtcccacatcagatagaaaagtggaggttgaacactttataattg 29874119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 376 - 466
Target Start/End: Original strand, 37106156 - 37106247
Alignment:
Q  376 gatggactcacatttgagggggagtgttg-tgtgtaagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataa 466  Q
    |||||||||||| |||||||||||||||| | || |||||| ||||||||||||||||||| ||| || |||  ||||||||||| ||||||    
T  37106156 gatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataa 37106247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 342 - 439
Target Start/End: Original strand, 40733813 - 40733915
Alignment:
Q  342 taagagcttccgctcgagggagg--cacgattaattgatggactcacatttgagggggagtg---ttgtgtgtaagtgtaagttatatgtcccacatcga 436  Q
    |||||||||||||| || || ||  || ||| |||||||||||||||| |||||||||||||   ||||||  |||||| ||||||||||||||||||||    
T  40733813 taagagcttccgcttgaagggggagcatgatgaattgatggactcacacttgagggggagtgttattgtgtacaagtgtgagttatatgtcccacatcga 40733912  T
Q  437 ata 439  Q
    |||    
T  40733913 ata 40733915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 400 - 466
Target Start/End: Original strand, 962591 - 962657
Alignment:
Q  400 tgttgtgtgtaagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataa 466  Q
    |||||| || |||||| ||||||||||||||||||| ||||||||||  ||||||||||| ||||||    
T  962591 tgttgtatgcaagtgtgagttatatgtcccacatcggatagaaaagtaaaggttgaacaccttataa 962657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 376 - 446
Target Start/End: Complemental strand, 37894881 - 37894811
Alignment:
Q  376 gatggactcacatttgagggggagtgttgtgtgtaagtgtaagttatatgtcccacatcgaatagaaaagt 446  Q
    |||||||||| | || ||||||||| ||||||| || ||| ||||||||||||||||| ||||||||||||    
T  37894881 gatggactcatacttaagggggagtattgtgtgcaaatgtgagttatatgtcccacattgaatagaaaagt 37894811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 312 - 468
Target Start/End: Original strand, 6422018 - 6422171
Alignment:
Q  312 ggagaaaccagcaacgacgatacaagcaagtaagag-cttccgctcgagggagg--cacgattaattgatggactcacatttgagggggagtgttgtgtg 408  Q
    |||||||||||||||||| |||||||| ||||| |  |||||||| || || ||  || ||| |||||||||||||||| |||||||||||| |||||||    
T  6422018 ggagaaaccagcaacgacaatacaagctagtaaaaaacttccgcttgaagggggagcatgatgaattgatggactcacacttgagggggagtcttgtgtg 6422117  T
Q  409 taagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataatt 468  Q
     || |||       ||||||||||||  ||| ||||||  ||||||||||| ||||||||    
T  6422118 caaatgt------gatgtcccacatcagataaaaaagtaaaggttgaacacattataatt 6422171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 246 - 466
Target Start/End: Complemental strand, 36178592 - 36178368
Alignment:
Q  246 tgacacaatagtggtatcagagccctgctacgacgaagggtaggaccgaggcagccgatccgttgtggagaaaccagcaacgacgatacaagcaa--gta 343  Q
    |||| |||||||||||||||||||| | | |||||||||||  |||| ||||  ||| || |||| | ||||| |||||| ||||||| |  |||  |||    
T  36178592 tgacccaatagtggtatcagagccccggttcgacgaagggtgcgaccaaggccaccggtcagttgcgcagaaagcagcaatgacgatatagacaaaagta 36178493  T
Q  344 aga-gcttccgctcgagggaggcacgattaattgatggactcacatttgagggggagtgtt-gtgtgtaagtgtaagttatatgtcccacatcgaataga 441  Q
    | | |||||||||| ||||   |||  | || ||||||||||||| |||||||||| |||| || || |||||| ||||||||||||||| ||| ||| |    
T  36178492 aaaagcttccgctctaggggaacacattaaagtgatggactcacacttgagggggactgttggtttgcaagtgtgagttatatgtcccacttcggataaa 36178393  T
Q  442 aaagtggaggttgaacactttataa 466  Q
    | |||  |||| |||||| ||||||    
T  36178392 atagtaaaggtggaacaccttataa 36178368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 402 - 466
Target Start/End: Complemental strand, 3594341 - 3594277
Alignment:
Q  402 ttgtgtgtaagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataa 466  Q
    ||||||| |||||| |||| |||||  |||| ||||||||||||||||||| |||||||||||||    
T  3594341 ttgtgtgaaagtgtgagttgtatgtttcacaacgaatagaaaagtggaggtcgaacactttataa 3594277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 78 - 138
Target Start/End: Original strand, 30313169 - 30313229
Alignment:
Q  78 attgttgtgtgtaagtgtcagttatatgtctcacattgtatagaaaagtggaggttgaaca 138  Q
    ||||||||||| ||| ||  |||||||||||||||| | ||||||||||||||||||||||    
T  30313169 attgttgtgtgcaagcgtgtgttatatgtctcacatcggatagaaaagtggaggttgaaca 30313229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 400 - 480
Target Start/End: Complemental strand, 33954426 - 33954346
Alignment:
Q  400 tgttgtgtgtaagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataattgacatgactcat 480  Q
    ||||||||| |||||| ||||||||||||||||||  |||||||||| |||||| |||| | ||||| | | |||||||||    
T  33954426 tgttgtgtgcaagtgtgagttatatgtcccacatcagatagaaaagttgaggttaaacattatataacttaaatgactcat 33954346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 257 - 339
Target Start/End: Original strand, 7598411 - 7598493
Alignment:
Q  257 tggtatcagagccctgctacgacgaagggtaggaccgaggcagccgatccgttgtggagaaaccagcaacgacgatacaagca 339  Q
    |||||||| ||||| | | |||||||||||| ||| |||| ||||| ||||||| | ||||| ||||||||||| ||||||||    
T  7598411 tggtatcaaagcccaggttcgacgaagggtacgactgaggtagccggtccgttgcgcagaaagcagcaacgacggtacaagca 7598493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 364 - 465
Target Start/End: Original strand, 29676857 - 29676961
Alignment:
Q  364 gcacgattaattgatggactcacatttgagggggag---tgttgtgtgtaagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacact 460  Q
    ||||||| || ||||||||||||| ||||||||| |   ||||||||| | |||| ||||||||||||||||||| ||| || |||  ||||| |||||     
T  29676857 gcacgataaagtgatggactcacacttgagggggtgtgttgttgtgtgcaggtgtgagttatatgtcccacatcggataaaagagtaaaggtttaacacc 29676956  T
Q  461 ttata 465  Q
    |||||    
T  29676957 ttata 29676961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 365 - 466
Target Start/End: Original strand, 40733472 - 40733576
Alignment:
Q  365 cacgattaattgatggactcacatttgagggggagtgtt---gtgtgtaagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactt 461  Q
    |||||| ||||||| |||||||| |||||||| ||||||   ||||  |||||| ||||||||||||||||||  ||| ||||||  | ||||||||| |    
T  40733472 cacgatgaattgatagactcacacttgaggggaagtgttattgtgtacaagtgtgagttatatgtcccacatcagataaaaaagtaaatgttgaacacct 40733571  T
Q  462 tataa 466  Q
    |||||    
T  40733572 tataa 40733576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 400 - 477
Target Start/End: Original strand, 12910221 - 12910298
Alignment:
Q  400 tgttgtgtgtaagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataattgacatgact 477  Q
    |||||||||||||| | |||||||||| |||||||| || |||||||  ||||||||| | |||||| ||| ||||||    
T  12910221 tgttgtgtgtaagtttgagttatatgttccacatcggatggaaaagtacaggttgaaccccttataagtgaaatgact 12910298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 80 - 157
Target Start/End: Complemental strand, 33561616 - 33561539
Alignment:
Q  80 tgttgtgtgtaagtgtcagttatatgtctcacattgtatagaaaagtggaggttgaacaatttataattgagaagacc 157  Q
    ||||||||| |||||| ||||||||||  |||||   ||||||||||||||||| |||| ||||||| ||||| ||||    
T  33561616 tgttgtgtgcaagtgtgagttatatgttccacatcagatagaaaagtggaggttaaacactttataagtgagaggacc 33561539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 403 - 466
Target Start/End: Original strand, 30312785 - 30312848
Alignment:
Q  403 tgtgtgtaagtgtaagttatatgtcccacatcgaatagaaaa-gtggaggttgaacactttataa 466  Q
    |||| ||||||||  |||||||| |||||||| ||||||||| ||||||||||||||||||||||    
T  30312785 tgtgcgtaagtgtgtgttatatgccccacatc-aatagaaaaagtggaggttgaacactttataa 30312848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 410 - 466
Target Start/End: Original strand, 37105927 - 37105983
Alignment:
Q  410 aagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataa 466  Q
    |||||| ||||||||||||||||||||||| || |||  ||||||||||| ||||||    
T  37105927 aagtgtgagttatatgtcccacatcgaataaaatagtaaaggttgaacaccttataa 37105983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 418 - 466
Target Start/End: Complemental strand, 40163520 - 40163472
Alignment:
Q  418 gttatatgtcccacatcgaatagaaaagtggaggttgaacactttataa 466  Q
    |||||||||||||||||| ||||||||||  ||||||||||| ||||||    
T  40163520 gttatatgtcccacatcggatagaaaagtaaaggttgaacaccttataa 40163472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 400 - 444
Target Start/End: Complemental strand, 43443147 - 43443103
Alignment:
Q  400 tgttgtgtgtaagtgtaagttatatgtcccacatcgaatagaaaa 444  Q
    ||||||||| |||||||||||||||||||||||||  ||||||||    
T  43443147 tgttgtgtgcaagtgtaagttatatgtcccacatcagatagaaaa 43443103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 98 - 149
Target Start/End: Complemental strand, 29874170 - 29874119
Alignment:
Q  98 gttatatgtctcacattgtatagaaaagtggaggttgaacaatttataattg 149  Q
    |||||||||| |||||   |||||||||||||||||||||| ||||||||||    
T  29874170 gttatatgtcccacatcagatagaaaagtggaggttgaacactttataattg 29874119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 155 - 206
Target Start/End: Original strand, 33731724 - 33731775
Alignment:
Q  155 acctatttccttaaggttttgggtaagtgtgtgatgtctctctcgcttatgc 206  Q
    ||||||| ||||||||||||||||||| || || ||||||||| ||||||||    
T  33731724 acctattgccttaaggttttgggtaagagtatggtgtctctcttgcttatgc 33731775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 400 - 443
Target Start/End: Complemental strand, 36006044 - 36006001
Alignment:
Q  400 tgttgtgtgtaagtgtaagttatatgtcccacatcgaatagaaa 443  Q
    ||||||||  |||||| |||||||||||||||||||||||||||    
T  36006044 tgttgtgtacaagtgtgagttatatgtcccacatcgaatagaaa 36006001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 399 - 466
Target Start/End: Original strand, 42514641 - 42514708
Alignment:
Q  399 gtgttgtgtgtaagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataa 466  Q
    ||||||| || |||||| |||||||||||| |||||  ||||||||||  ||||||||||| ||||||    
T  42514641 gtgttgtatgcaagtgtgagttatatgtcctacatcagatagaaaagtaaaggttgaacaccttataa 42514708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 155 - 197
Target Start/End: Original strand, 6421807 - 6421849
Alignment:
Q  155 acctatttccttaaggttttgggtaagtgtgtgatgtctctct 197  Q
    ||||||| ||||||||||||||||||| ||||| |||||||||    
T  6421807 acctattgccttaaggttttgggtaagagtgtggtgtctctct 6421849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 84 - 198
Target Start/End: Original strand, 7598606 - 7598720
Alignment:
Q  84 gtgtgtaagtgtcagttatatgtctcacattgtatagaaaagtggaggttgaacaatttataattgagaagacctatttccttaaggttttgggtaagtg 183  Q
    ||||| |||||| ||||||||||| |||||   ||| ||||||  ||||||||||  |||||| | ||| |||| ||  |||||| ||||| |||||| |    
T  7598606 gtgtgcaagtgtgagttatatgtcccacatcagataaaaaagtaaaggttgaacaccttataagtaagaggacccataaccttaacgtttttggtaagag 7598705  T
Q  184 tgtgatgtctctctc 198  Q
    |||| ||||||||||    
T  7598706 tgtggtgtctctctc 7598720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 400 - 466
Target Start/End: Original strand, 16542442 - 16542508
Alignment:
Q  400 tgttgtgtgtaagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataa 466  Q
    ||||||||| |||||| ||||||| ||||||||||| ||| || |||  ||||||||||| ||||||    
T  16542442 tgttgtgtgcaagtgtgagttataagtcccacatcggataaaatagtaaaggttgaacaccttataa 16542508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 400 - 458
Target Start/End: Complemental strand, 28254402 - 28254344
Alignment:
Q  400 tgttgtgtgtaagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaaca 458  Q
    |||||||||  ||||| | ||||||||||||||||| ||||||||||  ||||||||||    
T  28254402 tgttgtgtgccagtgtgacttatatgtcccacatcggatagaaaagtaaaggttgaaca 28254344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 78 - 160
Target Start/End: Original strand, 30323455 - 30323537
Alignment:
Q  78 attgttgtgtgtaagtgtcagttatatgtctcacattgtatagaaaagtggaggttgaacaatttataattgagaagacctat 160  Q
    ||||||||||| ||||||  |||||||||| || ||   |||||||| ||||||||||||| |||| || ||||| |||||||    
T  30323455 attgttgtgtgcaagtgtgtgttatatgtcccaaatcagatagaaaattggaggttgaacactttagaagtgagaggacctat 30323537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 364 - 429
Target Start/End: Original strand, 40734232 - 40734300
Alignment:
Q  364 gcacgattaattgatggactcacatttgagggggagtg---ttgtgtgtaagtgtaagttatatgtccc 429  Q
    ||||||| |||||||||| ||||| |||||||||||||   ||||||  |||||| |||||||||||||    
T  40734232 gcacgatgaattgatggaatcacacttgagggggagtgttattgtgtacaagtgtgagttatatgtccc 40734300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 80 - 157
Target Start/End: Original strand, 962591 - 962668
Alignment:
Q  80 tgttgtgtgtaagtgtcagttatatgtctcacattgtatagaaaagtggaggttgaacaatttataattgagaagacc 157  Q
    |||||| || |||||| ||||||||||| ||||| | ||||||||||  ||||||||||  |||||| ||||| ||||    
T  962591 tgttgtatgcaagtgtgagttatatgtcccacatcggatagaaaagtaaaggttgaacaccttataagtgagaggacc 962668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 105 - 146
Target Start/End: Complemental strand, 13154521 - 13154480
Alignment:
Q  105 gtctcacattgtatagaaaagtggaggttgaacaatttataa 146  Q
    |||||||||||  ||||||||||||||||||||| |||||||    
T  13154521 gtctcacattgcttagaaaagtggaggttgaacactttataa 13154480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 246 - 339
Target Start/End: Original strand, 29676700 - 29676793
Alignment:
Q  246 tgacacaatagtggtatcagagccctgctacgacgaagggtaggaccgaggcagccgatccgttgtggagaaaccagcaacgacgatacaagca 339  Q
    |||| ||| |||||||||||||||| | | | |||||||||| ||| ||||| ||||||| |||| | ||||| || |||||||  ||||||||    
T  29676700 tgacccaacagtggtatcagagccccggttcaacgaagggtatgactgaggccgccgatcagttgcgcagaaagcaacaacgacagtacaagca 29676793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 80 - 157
Target Start/End: Complemental strand, 33953936 - 33953859
Alignment:
Q  80 tgttgtgtgtaagtgtcagttatatgtctcacattgtatagaaaagtggaggttgaacaatttataattgagaagacc 157  Q
    ||||||||| || ||| ||||||| ||| |||||   |||||||||||||||||||||| | ||||| ||||| ||||    
T  33953936 tgttgtgtgcaaatgtgagttataagtcccacatcagatagaaaagtggaggttgaacactatataagtgagaggacc 33953859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 438 - 466
Target Start/End: Original strand, 2336655 - 2336683
Alignment:
Q  438 tagaaaagtggaggttgaacactttataa 466  Q
    |||||||||||||||||||||||||||||    
T  2336655 tagaaaagtggaggttgaacactttataa 2336683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 82 - 146
Target Start/End: Complemental strand, 3594341 - 3594277
Alignment:
Q  82 ttgtgtgtaagtgtcagttatatgtctcacattgtatagaaaagtggaggttgaacaatttataa 146  Q
    ||||||| |||||| |||| ||||| |||||  | |||||||||||||||| ||||| |||||||    
T  3594341 ttgtgtgaaagtgtgagttgtatgtttcacaacgaatagaaaagtggaggtcgaacactttataa 3594277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 410 - 466
Target Start/End: Original strand, 6421388 - 6421444
Alignment:
Q  410 aagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataa 466  Q
    |||||| ||||||||||||||||||| ||| || |||  ||||||||||| ||||||    
T  6421388 aagtgtgagttatatgtcccacatcggataaaagagtaaaggttgaacaccttataa 6421444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 438 - 466
Target Start/End: Complemental strand, 13154508 - 13154480
Alignment:
Q  438 tagaaaagtggaggttgaacactttataa 466  Q
    |||||||||||||||||||||||||||||    
T  13154508 tagaaaagtggaggttgaacactttataa 13154480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 400 - 444
Target Start/End: Original strand, 16590881 - 16590925
Alignment:
Q  400 tgttgtgtgtaagtgtaagttatatgtcccacatcgaatagaaaa 444  Q
    ||||||||| |||||| |||||||||||||||||| |||| ||||    
T  16590881 tgttgtgtgcaagtgtgagttatatgtcccacatcaaataaaaaa 16590925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 78 - 146
Target Start/End: Complemental strand, 29873704 - 29873636
Alignment:
Q  78 attgttgtgtgtaagtgtcagttatatgtctcacattgtatagaaaagtggaggttgaacaatttataa 146  Q
    ||||||||||| ||| ||  |||| ||||| |||||   |||||||||||||||||||||| |||||||    
T  29873704 attgttgtgtgcaagggtgtgttacatgtcccacatcagatagaaaagtggaggttgaacattttataa 29873636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 389 - 456
Target Start/End: Complemental strand, 31468925 - 31468855
Alignment:
Q  389 ttgagggggagtg---ttgtgtgtaagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaa 456  Q
    |||||||||||||   ||||||| |||||| ||||||||||||||||||| ||| || |||  ||||||||    
T  31468925 ttgagggggagtgttgttgtgtgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaa 31468855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 410 - 466
Target Start/End: Complemental strand, 36178760 - 36178704
Alignment:
Q  410 aagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataa 466  Q
    |||||| ||||||||||||||||||| ||| || |||  ||||||||||| ||||||    
T  36178760 aagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataa 36178704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 80 - 157
Target Start/End: Complemental strand, 41678534 - 41678455
Alignment:
Q  80 tgttgtgtgtaagtgtcagttatat--gtctcacattgtatagaaaagtggaggttgaacaatttataattgagaagacc 157  Q
    ||||||||| |||||| ||||||||  |||||||||   ||||||||| ||||||| |||| ||||||| ||||| ||||    
T  41678534 tgttgtgtgcaagtgtgagttatatatgtctcacatcagatagaaaaggggaggttaaacactttataagtgagaggacc 41678455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 75; Significance: 3e-34; HSPs: 53)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 246 - 466
Target Start/End: Original strand, 37345753 - 37345977
Alignment:
Q  246 tgacacaatagtggtatcagagccctgctacgacgaagggtaggaccgaggcagccgatccgttgtggagaaaccagcaacgacgatacaagcaagtaag 345  Q
    |||| ||| |||||||||||||||| | | |   ||||||||  | ||||||||||||||||||| ||||||| |||||||| ||||||||||||||||     
T  37345753 tgacccaacagtggtatcagagccccggttcagtgaagggtacaatcgaggcagccgatccgttgcggagaaagcagcaacggcgatacaagcaagtaaa 37345852  T
Q  346 agcttccgctcgagggagg--cacgattaattgatggactcacatttgagggggagtgttgtgtgtaagtgtaagttatat--gtcccacatcgaataga 441  Q
    ||||||| || || || ||  |||||| |||||||| ||||||| |||| ||||||||||||||| |||||| ||||||||  |||  | |||  |||||    
T  37345853 agcttccacttgacgggggagcacgatgaattgatgaactcacacttgaaggggagtgttgtgtgcaagtgtgagttatatatgtcatatatctgataga 37345952  T
Q  442 aaagtggaggttgaacactttataa 466  Q
    |||||||||||| |||| |||||||    
T  37345953 aaagtggaggttaaacattttataa 37345977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 313 - 466
Target Start/End: Original strand, 7553926 - 7554084
Alignment:
Q  313 gagaaaccagcaacgacgatacaagcaa-gtaagagcttccgctcgagggag-gcacgattaattgatggactcacatttgagggggagtgttgt---gt 407  Q
    ||||||||||||||| ||| ||| |||| ||||||||||||||| ||||| | ||||||| |||||||||||||||| |||||||||||||||||   ||    
T  7553926 gagaaaccagcaacggcgacacatgcaaagtaagagcttccgcttgagggggagcacgatgaattgatggactcacacttgagggggagtgttgttgtgt 7554025  T
Q  408 gtaagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataa 466  Q
    | |||||| ||||||||||||||||||| ||| || |||  ||||||||||| ||||||    
T  7554026 gcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataa 7554084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 236 - 355
Target Start/End: Complemental strand, 8128436 - 8128317
Alignment:
Q  236 ctcccctcaatgacacaatagtggtatcagagccctgctacgacgaagggtaggaccgaggcagccgatccgttgtggagaaaccagcaacgacgataca 335  Q
    ||||||||| | || ||| |||||||||| ||||||| | |||||||||||| || ||| ||||||| ||||||| ||||||||||||||||||||||||    
T  8128436 ctcccctcactaacccaacagtggtatcaaagccctggttcgacgaagggtacgatcgaagcagccgttccgttgcggagaaaccagcaacgacgataca 8128337  T
Q  336 agcaagtaagagcttccgct 355  Q
    | ||||||||||||||||||    
T  8128336 aacaagtaagagcttccgct 8128317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 307 - 434
Target Start/End: Complemental strand, 40094653 - 40094525
Alignment:
Q  307 gttgtggagaaaccagcaacgacgatacaagcaagtaagagcttccgctcgagggag-gcacgattaattgatggactcacatttgagggggagtgttgt 405  Q
    |||| ||| ||||||||||| |||||||||||||||||||||||||||| ||||||| ||  ||| ||| |||||||||||| || ||| ||||||||||    
T  40094653 gttgcggataaaccagcaacaacgatacaagcaagtaagagcttccgcttgagggagagcgtgatgaatagatggactcacactttaggaggagtgttgt 40094554  T
Q  406 gtgtaagtgtaagttatatgtcccacatc 434  Q
    ||| |||||| |||||||||||| |||||    
T  40094553 gtgcaagtgtgagttatatgtccaacatc 40094525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 210 - 466
Target Start/End: Original strand, 30245292 - 30245553
Alignment:
Q  210 agcctcaatgtgggtggtcaccctggctcccctcaatgacacaatagtggtatcagagccctgctacgacgaa-gggtaggaccgaggcagccgatccgt 308  Q
    |||||||||||||  |||| |||  |||||||| | |||| ||| |||||||||||||||| ||| |||| || ||||| || |||||||||||||||||    
T  30245292 agcctcaatgtggacggtcccccatgctcccctta-tgacccaacagtggtatcagagccccgct-cgacaaaagggtacgatcgaggcagccgatccgt 30245389  T
Q  309 t-gtggagaaaccagcaacgacgatacaagcaagtaagagcttccgctcgagggag-gcacgat-taattgatggactcacatttgaggggga---gtgt 402  Q
    | | | ||| | |||||||| ||||||||||||||||||||||||||| ||||| | ||| |||  ||  || |||| |||| ||||||||||    |||    
T  30245390 ttgcgcagagagcagcaacggcgatacaagcaagtaagagcttccgcttgagggggagcatgatgaaaaagacggacacacacttgagggggactgttgt 30245489  T
Q  403 tgtgtgtaagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataa 466  Q
    |||||| |||||| ||||||||||||||||||  ||| || |||  ||||||||||| ||||||    
T  30245490 tgtgtgcaagtgtgagttatatgtcccacatcagataaaagagtaaaggttgaacaccttataa 30245553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 312 - 466
Target Start/End: Original strand, 45434536 - 45434695
Alignment:
Q  312 ggagaaaccagcaacgacgatacaagcaagtaaga--gcttccgctcgagggagg--cacgattaattgatggactcacatttgagggggagt-gttgtg 406  Q
    |||||||| ||||||| |||||||||||||||| |  ||||||||| || || ||  || ||| |||||| ||||||||| ||| ||||| || ||||||    
T  45434536 ggagaaactagcaacggcgatacaagcaagtaaaaaagcttccgcttgaagggggagcatgatgaattgaaggactcacacttgggggggtgttgttgtg 45434635  T
Q  407 tgtaagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataa 466  Q
    |  |||||||||||||||||||||||||| ||| ||||||  ||||||||||| ||||||    
T  45434636 tacaagtgtaagttatatgtcccacatcggataaaaaagtaaaggttgaacaccttataa 45434695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 163 - 339
Target Start/End: Complemental strand, 37533438 - 37533257
Alignment:
Q  163 ccttaaggttttgggtaagtgtgtgatgtctctctcgcttatgc------tctagcctcaatgtgggtggtcaccctggctcccctcaatgacacaatag 256  Q
    ||||||||||||||||||| ||||| ||||||| | |||| |||      ||||||||| ||||||  |||| |||  |||||||||  |||| ||| ||    
T  37533438 ccttaaggttttgggtaagagtgtggtgtctcttttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcg-tgacccaacag 37533340  T
Q  257 tggtatcagagccctgctacgacgaagggtaggaccgaggcagccgatccgttgtggagaaaccagcaacgacgatacaagca 339  Q
    |||||||||||||| | | |||||||||||  ||||||||| |||| || |||| | ||||| ||||||||||| ||||||||    
T  37533339 tggtatcagagccccggttcgacgaagggtgcgaccgaggccgccggtcagttgcgtagaaagcagcaacgacggtacaagca 37533257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 320 - 466
Target Start/End: Complemental strand, 22566912 - 22566761
Alignment:
Q  320 cagcaacgacgatacaagcaagtaaga-gcttccgctcgagggag-gcacgattaattgatggactcacatttgagggggagtgttgtg---tgtaagtg 414  Q
    |||||||||| |||||||||||||| | ||||||||||  ||| | ||||||| || |||| |||| |||||||||||||||||||||    || |||||    
T  22566912 cagcaacgacaatacaagcaagtaaaaagcttccgctctggggggagcacgataaagtgatagactaacatttgagggggagtgttgttgtatgcaagtg 22566813  T
Q  415 taagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataa 466  Q
    | ||| ||||||||||||||| ||| || |||  ||||||||||| ||||||    
T  22566812 tgagtaatatgtcccacatcggataaaagagtaaaggttgaacaccttataa 22566761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 329 - 466
Target Start/End: Original strand, 30244618 - 30244760
Alignment:
Q  329 cgatacaagcaagtaagagcttccgct-cgagggaggcacgattaatt-gatggactcacatttgagggggagtgttgt---gtgtaagtgtaagttata 423  Q
    ||||||||||||||||||||||||||| | ||||  ||| ||| ||   |||||||||||| |||||||||||||||||   ||| |||||| |||||||    
T  30244618 cgatacaagcaagtaagagcttccgcttcaaggggagcatgatgaaaaagatggactcacacttgagggggagtgttgttgtgtgcaagtgtgagttata 30244717  T
Q  424 tgtcccacatcgaatagaaaagtggaggttgaacactttataa 466  Q
    |||||||||| | ||| || |||  ||||||||||| ||||||    
T  30244718 tgtcccacattggataaaagagtaaaggttgaacaccttataa 30244760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 312 - 405
Target Start/End: Complemental strand, 48243335 - 48243240
Alignment:
Q  312 ggagaaaccagcaacgacgatacaagcaagtaagagcttccgctcga--gggaggcacgattaattgatggactcacatttgagggggagtgttgt 405  Q
    |||||||||||||||| |||||||||||||||||| ||||| || ||  |||  ||| ||| |||||||||| ||||| |||||||||||||||||    
T  48243335 ggagaaaccagcaacggcgatacaagcaagtaagaacttccacttgaagggggagcatgatgaattgatggattcacacttgagggggagtgttgt 48243240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 415 - 466
Target Start/End: Original strand, 10341840 - 10341891
Alignment:
Q  415 taagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataa 466  Q
    ||||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  10341840 taagttatatgtctcacatcggatagaaaagtggaggttgaacactttataa 10341891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 339 - 459
Target Start/End: Original strand, 14681438 - 14681562
Alignment:
Q  339 aagtaagagcttccgctcgagggagg---cacgattaattgatggactcacatttgagggggagtgttg-tgtgtaagtgtaagttatatgtcccacatc 434  Q
    ||||||||||||||||| || || ||   || ||| ||| |||||||||||| |||||||||||||||| | || |||||||||||||||||||||||||    
T  14681438 aagtaagagcttccgcttgaaggggggagcatgatgaatagatggactcacacttgagggggagtgttggtttgcaagtgtaagttatatgtcccacatc 14681537  T
Q  435 gaatagaaaagtggaggttgaacac 459  Q
      ||| || |||  |||||||||||    
T  14681538 agataaaatagtaaaggttgaacac 14681562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 79 - 302
Target Start/End: Complemental strand, 1085782 - 1085546
Alignment:
Q  79 ttgttgtgtgtaagtgtcagttatatgtctcacattgtatagaaaagtggaggttgaacaatttataattgagaagacctat--------ttccttaagg 170  Q
    |||||||||| |||||| ||||||||||| ||||| | ||| || |||  |||||||||| ||||||| | ||| |||| ||        | ||||||||    
T  1085782 ttgttgtgtgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacactttataagtaagaggacccataaacccattgccttaagg 1085683  T
Q  171 ttttgggtaagtgtgtgatgtctctctcgcttatgc------tctagcctcaatgtgggtggtcaccctggctcccctcaatgacacaatagtggtatca 264  Q
    ||||||||||| |||||  ||||||||  ||| ||       ||||||||| ||||||  |||| ||||||||||||||| |||| ||| ||||||||||    
T  1085682 ttttgggtaagagtgtggcgtctctcttacttgtgtggttgttctagcctcgatgtggacggtccccctggctcccctca-tgacccaacagtggtatca 1085584  T
Q  265 gagccctgctacgacgaagggtaggaccgaggcagccg 302  Q
     ||||| | | ||| |||||||| ||||||||||||||    
T  1085583 tagccccggttcgatgaagggtatgaccgaggcagccg 1085546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 400 - 459
Target Start/End: Complemental strand, 118466 - 118407
Alignment:
Q  400 tgttgtgtgtaagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacac 459  Q
    ||||||||| |||||||||||||||||||||||||  ||||||||||  |||||||||||    
T  118466 tgttgtgtgcaagtgtaagttatatgtcccacatcagatagaaaagtaaaggttgaacac 118407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 312 - 355
Target Start/End: Original strand, 47129376 - 47129419
Alignment:
Q  312 ggagaaaccagcaacgacgatacaagcaagtaagagcttccgct 355  Q
    |||||||||||||||||| |||||||||||||||||||||||||    
T  47129376 ggagaaaccagcaacgacaatacaagcaagtaagagcttccgct 47129419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 400 - 466
Target Start/End: Complemental strand, 1085781 - 1085715
Alignment:
Q  400 tgttgtgtgtaagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataa 466  Q
    ||||||||| |||||| ||||||||||||||||||| ||| || |||  ||||||||||||||||||    
T  1085781 tgttgtgtgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacactttataa 1085715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 400 - 466
Target Start/End: Complemental strand, 24838867 - 24838801
Alignment:
Q  400 tgttgtgtgtaagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataa 466  Q
    |||||||| ||||||||||||||||||| ||||||||||| || |||  ||||||||||| ||||||    
T  24838867 tgttgtgtataagtgtaagttatatgtctcacatcgaataaaagagtaaaggttgaacaccttataa 24838801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 97 - 146
Target Start/End: Original strand, 10341842 - 10341891
Alignment:
Q  97 agttatatgtctcacattgtatagaaaagtggaggttgaacaatttataa 146  Q
    ||||||||||||||||| | |||||||||||||||||||||| |||||||    
T  10341842 agttatatgtctcacatcggatagaaaagtggaggttgaacactttataa 10341891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 346 - 466
Target Start/End: Complemental strand, 37533230 - 37533109
Alignment:
Q  346 agcttccgctcgagggaggcacgattaattgatggactcacatttgagggggagtgttg-tgtgtaagtgtaagttatatgtcccacatcgaatagaaaa 444  Q
    ||||||||||| ||||   |||| | || ||||||||||||  |||||||||||||||| | || |||||| ||||||||||||||||| | ||| || |    
T  37533230 agcttccgctctaggggaacacgttaaagtgatggactcacgcttgagggggagtgttggtttgcaagtgtgagttatatgtcccacattggataaaata 37533131  T
Q  445 gtggaggttgaacactttataa 466  Q
    ||  ||||||||||| ||||||    
T  37533130 gtaaaggttgaacaccttataa 37533109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 379 - 466
Target Start/End: Original strand, 30255308 - 30255398
Alignment:
Q  379 ggactcacatttgagggggagtgttgt---gtgtaagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataa 466  Q
    ||||||||| |||||||||||||||||   ||| ||||||  |||||||||||||||||| ||| || |||  ||||||||||| ||||||    
T  30255308 ggactcacacttgagggggagtgttgttgtgtgcaagtgtgcgttatatgtcccacatcggataaaagagtaaaggttgaacaccttataa 30255398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 402 - 446
Target Start/End: Complemental strand, 40230454 - 40230410
Alignment:
Q  402 ttgtgtgtaagtgtaagttatatgtcccacatcgaatagaaaagt 446  Q
    ||||||| |||||||||||||||||||||||||||||| ||||||    
T  40230454 ttgtgtgcaagtgtaagttatatgtcccacatcgaataaaaaagt 40230410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 211 - 337
Target Start/End: Complemental strand, 22567059 - 22566932
Alignment:
Q  211 gcctcaatgtgggtggtcaccctggctcccctcaatgacacaatagtggtatcagag-ccctgctacgacgaagggtaggaccgaggcagccgatccgtt 309  Q
    ||||| |||||| ||||| |||  ||||||||||| ||| ||||||||||||||||| ||| | | |||||||||||| |||| ||||  ||| |  |||    
T  22567059 gcctcgatgtggatggtcccccgagctcccctcaacgacccaatagtggtatcagagcccccggtccgacgaagggtacgaccaaggccaccggttagtt 22566960  T
Q  310 gtggagaaaccagcaacgacgatacaag 337  Q
    ||| ||||| |||||| |||| ||||||    
T  22566959 gtgcagaaaacagcaaagacggtacaag 22566932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 312 - 426
Target Start/End: Original strand, 45697815 - 45697929
Alignment:
Q  312 ggagaaaccagcaacgacgatacaagcaagtaagagcttccgctcgagggag-gcacgattaattgatggactcacatttgagggggagtgttgtgtgta 410  Q
    ||||||| ||||||||||| |||| | ||||||||||||||||| || || | ||| ||| ||| |||  ||||||| |||||| ||||||||||||| |    
T  45697815 ggagaaagcagcaacgacggtaca-gtaagtaagagcttccgcttgaaggggagcatgatgaatagataaactcacacttgaggaggagtgttgtgtgca 45697913  T
Q  411 agtgtaagttatatgt 426  Q
    ||||| | ||||||||    
T  45697914 agtgtcatttatatgt 45697929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 400 - 466
Target Start/End: Original strand, 7517573 - 7517639
Alignment:
Q  400 tgttgtgtgtaagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataa 466  Q
    ||||||||| |||||| ||||||||||||||||||| ||| || |||  ||||||||||| ||||||    
T  7517573 tgttgtgtgcaagtgtgagttatatgtcccacatcggataaaagagtaaaggttgaacaccttataa 7517639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 257 - 339
Target Start/End: Complemental strand, 28300552 - 28300471
Alignment:
Q  257 tggtatcagagccctgctacgacgaagggtaggaccgaggcagccgatccgttgtggagaaaccagcaacgacgatacaagca 339  Q
    ||||||||||||| || | |||||||||||| ||||||||||| || ||| ||| | ||||| ||||||||||| ||||||||    
T  28300552 tggtatcagagcc-tgattcgacgaagggtacgaccgaggcagtcggtccattgcgcagaaagcagcaacgacggtacaagca 28300471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 376 - 466
Target Start/End: Original strand, 30244236 - 30244329
Alignment:
Q  376 gatggactcacatttgagggggagtgttgt-gtgta--agtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataa 466  Q
    |||| ||||||| ||||||||||||||||| |||||  ||||| ||||||||||||||||||| ||| || |||  |||||||| || ||||||    
T  30244236 gatgaactcacacttgagggggagtgttgttgtgtacaagtgtgagttatatgtcccacatcggataaaagagtaaaggttgaagaccttataa 30244329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 376 - 515
Target Start/End: Original strand, 30245043 - 30245193
Alignment:
Q  376 gatggactcacatttgagggggagtgttgt-gtgta--agtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataattgaca 472  Q
    ||||||||| || ||||||||||||||||| |||||  ||||| |||||||||| |||||||| ||| || |||  ||||||||||| |||||| | | |    
T  30245043 gatggactcgcacttgagggggagtgttgttgtgtacaagtgtgagttatatgttccacatcggataaaagagtaaaggttgaacaccttataagtaaga 30245142  T
Q  473 tgac--------tcattttcttaaggtttcgggtaagagtgtggtgtctct 515  Q
     |||        |||||  |||||||||| |||||||||||||||||||||    
T  30245143 cgacccataaactcattgccttaaggttttgggtaagagtgtggtgtctct 30245193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 400 - 466
Target Start/End: Complemental strand, 36534949 - 36534883
Alignment:
Q  400 tgttgtgtgtaagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataa 466  Q
    ||||||||| |||||||| ||||||||||||| ||| ||| || ||| |||||||||||| ||||||    
T  36534949 tgttgtgtgcaagtgtaacttatatgtcccacctcggataaaacagtagaggttgaacaccttataa 36534883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 399 - 453
Target Start/End: Original strand, 37345553 - 37345607
Alignment:
Q  399 gtgttgtgtgtaagtgtaagttatatgtcccacatcgaatagaaaagtggaggtt 453  Q
    |||| ||||| ||| || |||||||||||||||||||||||| ||||||||||||    
T  37345553 gtgtcgtgtgcaagagtgagttatatgtcccacatcgaataggaaagtggaggtt 37345607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 255 - 309
Target Start/End: Complemental strand, 40094744 - 40094691
Alignment:
Q  255 agtggtatcagagccctgctacgacgaagggtaggaccgaggcagccgatccgtt 309  Q
    |||||||||||||||||| | |||||||||||| |||||||||||||| ||||||    
T  40094744 agtggtatcagagccctgtt-cgacgaagggtacgaccgaggcagccggtccgtt 40094691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 400 - 466
Target Start/End: Complemental strand, 41910759 - 41910693
Alignment:
Q  400 tgttgtgtgtaagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataa 466  Q
    |||||||||||||||| ||||||||||||||||||| ||| || |||  |||||||| || ||||||    
T  41910759 tgttgtgtgtaagtgtgagttatatgtcccacatcggataaaagagtaaaggttgaataccttataa 41910693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 400 - 465
Target Start/End: Complemental strand, 8128606 - 8128541
Alignment:
Q  400 tgttgtgtgtaagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttata 465  Q
    ||||||||| |||||| |||||||||||||| |||| |||||||| |  ||||||||||| |||||    
T  8128606 tgttgtgtgcaagtgtgagttatatgtcccatatcggatagaaaaataaaggttgaacaccttata 8128541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 246 - 339
Target Start/End: Complemental strand, 37532997 - 37532904
Alignment:
Q  246 tgacacaatagtggtatcagagccctgctacgacgaagggtaggaccgaggcagccgatccgttgtggagaaaccagcaacgacgatacaagca 339  Q
    |||| ||| |||||||||||||||| | | |||||||||||  ||||||||| |||| || |||| | ||||| ||||||||||  ||||||||    
T  37532997 tgacccaacagtggtatcagagccccggttcgacgaagggtgcgaccgaggccgccggtcagttgcgcagaaagcagcaacgactgtacaagca 37532904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 312 - 352
Target Start/End: Complemental strand, 1085509 - 1085469
Alignment:
Q  312 ggagaaaccagcaacgacgatacaagcaagtaagagcttcc 352  Q
    |||||||||||||||  ||||||||||||||||||||||||    
T  1085509 ggagaaaccagcaacagcgatacaagcaagtaagagcttcc 1085469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 475 - 515
Target Start/End: Original strand, 9901719 - 9901759
Alignment:
Q  475 actcattttcttaaggtttcgggtaagagtgtggtgtctct 515  Q
    ||||||| ||||||||||| |||||||||||||||||||||    
T  9901719 actcattgtcttaaggttttgggtaagagtgtggtgtctct 9901759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 163 - 202
Target Start/End: Original strand, 7554109 - 7554148
Alignment:
Q  163 ccttaaggttttgggtaagtgtgtgatgtctctctcgctt 202  Q
    ||||||||||||||||||| ||||| ||||||||||||||    
T  7554109 ccttaaggttttgggtaagagtgtggtgtctctctcgctt 7554148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 399 - 446
Target Start/End: Complemental strand, 28301709 - 28301662
Alignment:
Q  399 gtgttgtgtgtaagtgtaagttatatgtcccacatcgaatagaaaagt 446  Q
    |||||||||| |||||| ||||||||||| ||||||| ||||||||||    
T  28301709 gtgttgtgtgcaagtgtgagttatatgtctcacatcggatagaaaagt 28301662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 155 - 197
Target Start/End: Complemental strand, 23459 - 23417
Alignment:
Q  155 acctatttccttaaggttttgggtaagtgtgtgatgtctctct 197  Q
    ||||||| ||||||||||||||||||| ||||| |||||||||    
T  23459 acctattgccttaaggttttgggtaagagtgtggtgtctctct 23417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 379 - 466
Target Start/End: Original strand, 10342230 - 10342313
Alignment:
Q  379 ggactcacatttgagggggagtgttgtgtgtaagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataa 466  Q
    ||||||| | |||||||||||||| ||||| |||||| ||||    || |||||||  |||||||||| |||||| ||||||||||||    
T  10342230 ggactcatacttgagggggagtgtggtgtgcaagtgtgagtt----gttccacatcatatagaaaagtagaggttaaacactttataa 10342313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 80 - 126
Target Start/End: Complemental strand, 28301708 - 28301662
Alignment:
Q  80 tgttgtgtgtaagtgtcagttatatgtctcacattgtatagaaaagt 126  Q
    ||||||||| |||||| ||||||||||||||||| | ||||||||||    
T  28301708 tgttgtgtgcaagtgtgagttatatgtctcacatcggatagaaaagt 28301662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 79 - 161
Target Start/End: Original strand, 30244693 - 30244775
Alignment:
Q  79 ttgttgtgtgtaagtgtcagttatatgtctcacattgtatagaaaagtggaggttgaacaatttataattgagaagacctatt 161  Q
    |||||||||| |||||| ||||||||||| ||||||| ||| || |||  ||||||||||  |||||| | ||| ||||||||    
T  30244693 ttgttgtgtgcaagtgtgagttatatgtcccacattggataaaagagtaaaggttgaacaccttataaataagaggacctatt 30244775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 164 - 202
Target Start/End: Complemental strand, 34218107 - 34218069
Alignment:
Q  164 cttaaggttttgggtaagtgtgtgatgtctctctcgctt 202  Q
    |||||||||||||||||| ||||| ||||||||||||||    
T  34218107 cttaaggttttgggtaagagtgtggtgtctctctcgctt 34218069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 400 - 515
Target Start/End: Complemental strand, 34218199 - 34218076
Alignment:
Q  400 tgttgtgtgtaagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataattgacatgactcat--------tttcttaaggt 491  Q
    ||||||||  || ||| ||||||||||| ||||||| ||| ||||||  | ||||||||| |||||| ||| | |||||||        | |||||||||    
T  34218199 tgttgtgtacaaatgtgagttatatgtctcacatcggataaaaaagtaaatgttgaacaccttataagtgagaggactcataaacccattgtcttaaggt 34218100  T
Q  492 ttcgggtaagagtgtggtgtctct 515  Q
    || |||||||||||||||||||||    
T  34218099 tttgggtaagagtgtggtgtctct 34218076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 400 - 466
Target Start/End: Complemental strand, 40094939 - 40094873
Alignment:
Q  400 tgttgtgtgtaagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataa 466  Q
    ||||||||| |||||| ||||||||||| ||||||||||| || |||  ||||| ||||| ||||||    
T  40094939 tgttgtgtgcaagtgtgagttatatgtctcacatcgaataaaagagtaaaggttcaacaccttataa 40094873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 400 - 466
Target Start/End: Original strand, 43241488 - 43241554
Alignment:
Q  400 tgttgtgtgtaagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataa 466  Q
    ||||||||| |||||| |||||||||| |||||||| ||| |||| |  ||||||||||| ||||||    
T  43241488 tgttgtgtgcaagtgtgagttatatgttccacatcggataaaaaaataaaggttgaacaccttataa 43241554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 163 - 197
Target Start/End: Original strand, 45434720 - 45434754
Alignment:
Q  163 ccttaaggttttgggtaagtgtgtgatgtctctct 197  Q
    ||||||||||||||||||| |||||||||||||||    
T  45434720 ccttaaggttttgggtaagagtgtgatgtctctct 45434754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 478 - 515
Target Start/End: Original strand, 14681589 - 14681626
Alignment:
Q  478 cattttcttaaggtttcgggtaagagtgtggtgtctct 515  Q
    |||| ||||||||||| |||||||||||||||||||||    
T  14681589 cattgtcttaaggttttgggtaagagtgtggtgtctct 14681626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 163 - 196
Target Start/End: Complemental strand, 23569076 - 23569043
Alignment:
Q  163 ccttaaggttttgggtaagtgtgtgatgtctctc 196  Q
    ||||||||||||||||||| ||||||||||||||    
T  23569076 ccttaaggttttgggtaagagtgtgatgtctctc 23569043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 475 - 515
Target Start/End: Original strand, 30253568 - 30253608
Alignment:
Q  475 actcattttcttaaggtttcgggtaagagtgtggtgtctct 515  Q
    |||||||  |||||||||| |||||||||||||||||||||    
T  30253568 actcattgccttaaggttttgggtaagagtgtggtgtctct 30253608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 402 - 466
Target Start/End: Original strand, 36622955 - 36623019
Alignment:
Q  402 ttgtgtgtaagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataa 466  Q
    ||||||| |||||| ||||||||||||||||||| ||| || |||  ||||| |||| |||||||    
T  36622955 ttgtgtgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttaaacattttataa 36623019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 117 - 157
Target Start/End: Original strand, 37345948 - 37345988
Alignment:
Q  117 atagaaaagtggaggttgaacaatttataattgagaagacc 157  Q
    ||||||||||||||||| |||| ||||||| ||||||||||    
T  37345948 atagaaaagtggaggttaaacattttataagtgagaagacc 37345988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 484 - 516
Target Start/End: Complemental strand, 37533437 - 37533405
Alignment:
Q  484 cttaaggtttcgggtaagagtgtggtgtctctt 516  Q
    |||||||||| ||||||||||||||||||||||    
T  37533437 cttaaggttttgggtaagagtgtggtgtctctt 37533405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 438 - 466
Target Start/End: Complemental strand, 42282145 - 42282117
Alignment:
Q  438 tagaaaagtggaggttgaacactttataa 466  Q
    |||||||||||||||||||||||||||||    
T  42282145 tagaaaagtggaggttgaacactttataa 42282117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 67; Significance: 2e-29; HSPs: 42)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 304 - 435
Target Start/End: Complemental strand, 13785872 - 13785739
Alignment:
Q  304 tccgttgtggagaaaccagcaacgacgatacaagcaagtaagagcttccgctcga--gggaggcacgattaattgatggactcacatttgagggggagtg 401  Q
    ||||||| ||||||| |||||||  ||||||||||||||||||||||||||| ||  ||||  || ||| ||| ||| ||||||||||||||||||||||    
T  13785872 tccgttgcggagaaagcagcaacaccgatacaagcaagtaagagcttccgcttgaaggggaaacatgatgaatagatagactcacatttgagggggagtg 13785773  T
Q  402 ttgtgtgtaagtgtaagttatatgtcccacatcg 435  Q
    ||||||| |||||| |||||||||||||| ||||    
T  13785772 ttgtgtggaagtgtgagttatatgtcccaaatcg 13785739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 280 - 466
Target Start/End: Complemental strand, 3295306 - 3295114
Alignment:
Q  280 gaagggtaggaccgaggcagccgatccgtt-gtggagaaaccagcaacgacgatacaagcaagtaagagcttccgctcgagggag-gcacgattaattga 377  Q
    |||||||| ||||||||||| || |||||| | | ||||| |||||||| |||||||||||||||||||||||||||  |||| | ||||||  || |||    
T  3295306 gaagggtacgaccgaggcagtcggtccgtttgcgcagaaagcagcaacggcgatacaagcaagtaagagcttccgcttaagggggagcacgaaaaagtga 3295207  T
Q  378 tggactcacatttgagggggagtgttgt-----gtgtaagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataa 466  Q
    |||||||||| |||||||||||||||||     ||| |||||| ||| ||||||||||||||| ||| || |||  ||||||||||| ||||||    
T  3295206 tggactcacacttgagggggagtgttgttgtgtgtgcaagtgtgagt-atatgtcccacatcggataaaatagtaaaggttgaacaccttataa 3295114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 372 - 480
Target Start/End: Original strand, 31509586 - 31509696
Alignment:
Q  372 aattgatggactcacatttgagggggag--tgttgtgtgtaagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataattg 469  Q
    |||||||||||||||| ||||||| |||  ||||||||| |||||| ||||||||||| ||||||| ||||||||||||||||||| |||||||||| ||    
T  31509586 aattgatggactcacacttgagggagagattgttgtgtgcaagtgtgagttatatgtctcacatcggatagaaaagtggaggttgagcactttataagtg 31509685  T
Q  470 acatgactcat 480  Q
    | | |||||||    
T  31509686 agaggactcat 31509696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 366 - 460
Target Start/End: Complemental strand, 36522095 - 36522001
Alignment:
Q  366 acgattaattgatggactcacatttgagggggagtgttgtgtgtaagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacact 460  Q
    ||||| |||||||||||||||| ||||||| |||||||||| | |||||| ||||||||||||||||||  |||||||||| |||||||||||||    
T  36522095 acgatgaattgatggactcacacttgagggagagtgttgtgcgcaagtgtgagttatatgtcccacatcagatagaaaagttgaggttgaacact 36522001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 314 - 458
Target Start/End: Original strand, 38427461 - 38427599
Alignment:
Q  314 agaaaccagcaacgacgatacaagcaagtaagagcttccgctcg--agggaggcacgattaattgatggactcacatttgagggggagtgttgtgtgtaa 411  Q
    ||||||||||||||||||||||||||||||||||||||| || |  ||||  |||  || ||| |||||||||||| ||||||||||||||||||||       
T  38427461 agaaaccagcaacgacgatacaagcaagtaagagcttcctcttgaaaggggtgcatcatgaatagatggactcacacttgagggggagtgttgtgtg--- 38427557  T
Q  412 gtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaaca 458  Q
         ||||||||||||||||| | ||||||||||  ||||||||||    
T  38427558 -----agttatatgtcccacattggatagaaaagtaaaggttgaaca 38427599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 365 - 515
Target Start/End: Complemental strand, 36522437 - 36522279
Alignment:
Q  365 cacgattaattgatggactcacatttgagggggagtgttgtgtgtaagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttat 464  Q
    |||||| |||||||||| | ||| ||||||||||||||||| || |||||| ||||||||||| ||||| | |||||||| |||| |||||||| |||||    
T  36522437 cacgatgaattgatggatttacaattgagggggagtgttgtatgaaagtgtgagttatatgtctcacattggatagaaaaatggaagttgaacattttat 36522338  T
Q  465 aattgacatg--------actcattttcttaaggtttcgggtaagagtgtggtgtctct 515  Q
    || ||| | |        || |||| ||||||||||| |||||||||||||||||||||    
T  36522337 aagtgagaggaccaataaacccattatcttaaggttttgggtaagagtgtggtgtctct 36522279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 372 - 445
Target Start/End: Complemental strand, 24489397 - 24489324
Alignment:
Q  372 aattgatggactcacatttgagggggagtgttgtgtgtaagtgtaagttatatgtcccacatcgaatagaaaag 445  Q
    |||||||||||||||| |||||||||||||||||||  |||||| ||||||||||||||||||  |||||||||    
T  24489397 aattgatggactcacacttgagggggagtgttgtgttcaagtgtgagttatatgtcccacatcagatagaaaag 24489324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 312 - 466
Target Start/End: Complemental strand, 13416017 - 13415859
Alignment:
Q  312 ggagaaaccagcaacgacgatacaagcaagtaagagcttccgctcgagggagg--cacgattaattgatggactcacatttgagggg-gag-tgttgtgt 407  Q
    |||||||||| ||||  ||||||||||||||||||||||||||| || || ||  || | | ||| |||||||||||| |||||||| | | ||||||||    
T  13416017 ggagaaaccatcaacagcgatacaagcaagtaagagcttccgcttgaagggggagcatgctgaatagatggactcacacttgaggggagtgctgttgtgt 13415918  T
Q  408 gtaagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataa 466  Q
    | |||||| ||||||||||||||||||| ||| |  |||  ||||||||||| ||||||    
T  13415917 gcaagtgtgagttatatgtcccacatcggataaattagtaaaggttgaacaccttataa 13415859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 381 - 459
Target Start/End: Complemental strand, 26074330 - 26074252
Alignment:
Q  381 actcacatttgagggggagtgttgtgtgtaagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacac 459  Q
    ||||||| |||||||||||||||||||| |||||| ||||||||||| ||||||| ||| ||||||  |||||||||||    
T  26074330 actcacacttgagggggagtgttgtgtgcaagtgtgagttatatgtcacacatcggataaaaaagtaaaggttgaacac 26074252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 78 - 152
Target Start/End: Original strand, 31509614 - 31509688
Alignment:
Q  78 attgttgtgtgtaagtgtcagttatatgtctcacattgtatagaaaagtggaggttgaacaatttataattgaga 152  Q
    ||||||||||| |||||| ||||||||||||||||| | ||||||||||||||||||| || ||||||| |||||    
T  31509614 attgttgtgtgcaagtgtgagttatatgtctcacatcggatagaaaagtggaggttgagcactttataagtgaga 31509688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 398 - 466
Target Start/End: Original strand, 41632773 - 41632841
Alignment:
Q  398 agtgttgtgtgtaagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataa 466  Q
    ||||||||||| |||||||||||||||||| ||||||| ||||||||||  ||||||||||| ||||||    
T  41632773 agtgttgtgtgcaagtgtaagttatatgtctcacatcggatagaaaagtaaaggttgaacaccttataa 41632841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 335 - 466
Target Start/End: Original strand, 26074535 - 26074671
Alignment:
Q  335 aagcaagtaagagcttccgctcgagggag--gcacgattaattgatggactcacatttgagggggagtg---ttgtgtgtaagtgtaagttatatgtccc 429  Q
    |||||||||||||||||| || || ||||  ||| ||| |||||||||||||||| |||||||||||||   ||||||  |||||| |||||||||| ||    
T  26074535 aagcaagtaagagcttccacttgaaggagtagcatgatcaattgatggactcacacttgagggggagtgtttttgtgtacaagtgtgagttatatgttcc 26074634  T
Q  430 acatcgaatagaaaagtggaggttgaacactttataa 466  Q
    | |||| ||| || |||  ||||||||||| ||||||    
T  26074635 atatcggataaaagagtaaaggttgaacaccttataa 26074671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 372 - 459
Target Start/End: Complemental strand, 26074978 - 26074888
Alignment:
Q  372 aattgatggactcacatttgagggggagtgttg-tgtgt--aagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacac 459  Q
    |||||||||||||||| |||||||||||||||| |||||  |||||| ||||||||||||||||||| ||| || |||  |||||||||||    
T  26074978 aattgatggactcacacttgagggggagtgttgttgtgtacaagtgtgagttatatgtcccacatcggataaaagagtaaaggttgaacac 26074888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 78 - 152
Target Start/End: Complemental strand, 9510687 - 9510613
Alignment:
Q  78 attgttgtgtgtaagtgtcagttatatgtctcacattgtatagaaaagtggaggttgaacaatttataattgaga 152  Q
    ||||||||||| |||||| |||||||||| |||||||| |||||||||||||||||||   |||||||| |||||    
T  9510687 attgttgtgtgaaagtgtgagttatatgtttcacattgaatagaaaagtggaggttgagtcatttataagtgaga 9510613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 80 - 157
Target Start/End: Complemental strand, 36522402 - 36522325
Alignment:
Q  80 tgttgtgtgtaagtgtcagttatatgtctcacattgtatagaaaagtggaggttgaacaatttataattgagaagacc 157  Q
    |||||| || |||||| ||||||||||||||||||| |||||||| |||| |||||||| ||||||| ||||| ||||    
T  36522402 tgttgtatgaaagtgtgagttatatgtctcacattggatagaaaaatggaagttgaacattttataagtgagaggacc 36522325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 400 - 476
Target Start/End: Complemental strand, 36568732 - 36568656
Alignment:
Q  400 tgttgtgtgtaagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataattgacatgac 476  Q
    ||||||||| |||||| ||||||||||||||||||| ||||||||||  | ||||||||| |||||| ||| |||||    
T  36568732 tgttgtgtgcaagtgtgagttatatgtcccacatcggatagaaaagtaaaagttgaacaccttataagtgagatgac 36568656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 399 - 466
Target Start/End: Complemental strand, 1028683 - 1028616
Alignment:
Q  399 gtgttgtgtgtaagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataa 466  Q
    |||||||||  |||||| ||||||||||||||||||| ||||||||||  ||| ||||||||||||||    
T  1028683 gtgttgtgtacaagtgtgagttatatgtcccacatcggatagaaaagtaaaggatgaacactttataa 1028616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 207 - 309
Target Start/End: Original strand, 25328069 - 25328171
Alignment:
Q  207 tctagcctcaatgtgggtggtcaccctggctcccctcaatgacacaatagtggtatcagagccctgctacgacgaagggtaggaccgaggcagccgatcc 306  Q
    ||||||||||||||||  |||| |||  |||||||||| |||| ||| ||||||| ||||||||  || |||||||||| | || ||||||||||| |||    
T  25328069 tctagcctcaatgtggacggtcccccgagctcccctcagtgacccaacagtggtaccagagccccccttcgacgaagggcacgaacgaggcagccggtcc 25328168  T
Q  307 gtt 309  Q
    |||    
T  25328169 gtt 25328171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 312 - 466
Target Start/End: Original strand, 624099 - 624255
Alignment:
Q  312 ggagaaaccagcaacgacgatacaa-gcaagtaagagcttccgctcgagggag-gcacgattaattgatggactcacatttgagggggagtgttg-tgtg 408  Q
    |||||| ||||||||| |||||||| || ||||||||||||||||  | || | ||| ||| ||| |||||| ||||| |||||||| ||||||| | ||    
T  624099 ggagaacccagcaacggcgatacaaagcgagtaagagcttccgcttaaaggggagcatgatgaatagatgga-tcacacttgaggggaagtgttggtttg 624197  T
Q  409 taagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataa 466  Q
     |||||| ||||||||||||||||| | ||| || |||  ||||||||||| ||||||    
T  624198 caagtgtgagttatatgtcccacattgtataaaatagtaaaggttgaacacgttataa 624255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 400 - 455
Target Start/End: Complemental strand, 9510685 - 9510630
Alignment:
Q  400 tgttgtgtgtaagtgtaagttatatgtcccacatcgaatagaaaagtggaggttga 455  Q
    ||||||||| |||||| ||||||||||  ||||| |||||||||||||||||||||    
T  9510685 tgttgtgtgaaagtgtgagttatatgtttcacattgaatagaaaagtggaggttga 9510630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 421 - 480
Target Start/End: Original strand, 31509745 - 31509804
Alignment:
Q  421 atatgtcccacatcgaatagaaaagtggaggttgaacactttataattgacatgactcat 480  Q
    ||||||| ||||||| ||||||||||||||||||| |||||||||| ||| | |||||||    
T  31509745 atatgtctcacatcggatagaaaagtggaggttgagcactttataagtgagaggactcat 31509804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 163 - 339
Target Start/End: Original strand, 32487477 - 32487657
Alignment:
Q  163 ccttaaggttttgggtaagtgtgtgatgtctctctcgcttatgc------tctagcctcaatgtgggtggtcaccctggctcccctcaatgacacaatag 256  Q
    ||||||||||||||||||| |||||| || ||||| |||||||       ||||||||| |||||| ||||| |||  ||| ||| || |||| |||       
T  32487477 ccttaaggttttgggtaagagtgtgacgtatctcttgcttatgtggttgttctagcctcgatgtggatggtcccccaagcttccccca-tgacccaactc 32487575  T
Q  257 tggtatcagagccctgctacgacgaagggtaggaccgaggcagccgatccgttgtggagaaaccagcaacgacgatacaagca 339  Q
    |||||||||||||| | | |||||||||||  ||| |||||||||||| ||||||| ||||| | |||||| || ||||||||    
T  32487576 tggtatcagagccccgattcgacgaagggtgcgactgaggcagccgat-cgttgtgcagaaagccgcaacggcggtacaagca 32487657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 400 - 466
Target Start/End: Complemental strand, 12662817 - 12662751
Alignment:
Q  400 tgttgtgtgtaagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataa 466  Q
    ||||||||| |||||| ||||||||||||||||||| ||| || |||  |||||||||| |||||||    
T  12662817 tgttgtgtgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacattttataa 12662751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 149 - 203
Target Start/End: Original strand, 13042774 - 13042828
Alignment:
Q  149 gagaagacctatttccttaaggttttgggtaagtgtgtgatgtctctctcgctta 203  Q
    ||||||||||||| |||||||||||||||||||  |||| |||||||||| ||||    
T  13042774 gagaagacctattgccttaaggttttgggtaagaatgtggtgtctctctctctta 13042828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 400 - 458
Target Start/End: Original strand, 15370092 - 15370150
Alignment:
Q  400 tgttgtgtgtaagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaaca 458  Q
    ||||||||| |||||| ||||||||||||||||||||||| || |||  ||||||||||    
T  15370092 tgttgtgtgcaagtgtgagttatatgtcccacatcgaataaaatagtaaaggttgaaca 15370150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 80 - 138
Target Start/End: Original strand, 41632775 - 41632833
Alignment:
Q  80 tgttgtgtgtaagtgtcagttatatgtctcacattgtatagaaaagtggaggttgaaca 138  Q
    ||||||||| |||||| ||||||||||||||||| | ||||||||||  ||||||||||    
T  41632775 tgttgtgtgcaagtgtaagttatatgtctcacatcggatagaaaagtaaaggttgaaca 41632833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 163 - 339
Target Start/End: Complemental strand, 9498728 - 9498550
Alignment:
Q  163 ccttaaggttttgggtaagtgtgtgatgtctctctcgcttatgc-----tctagcctcaatgtgggtggtcaccctggctcccctcaatgacacaatagt 257  Q
    ||||||| ||||||||||| ||||| ||||||||| | |||||      ||||||||||||||||  |||| |||| |||||||||  |||| |||  |     
T  9498728 ccttaagattttgggtaagagtgtggtgtctctcttgtttatgtgctggtctagcctcaatgtggacggtccccctagctcccctc-gtgacccaagtgc 9498630  T
Q  258 ggtatcagagccctgctacgacgaagggtaggaccgaggcagccgatccgttgtggagaaaccagcaacgacgatacaagca 339  Q
    ||||||||||||| | | |||| ||||||| |||||||||||||| | ||||| | ||||| | |||||| || ||||||||    
T  9498629 ggtatcagagccccg-ttcgacaaagggtacgaccgaggcagccggt-cgttgcgcagaaagctgcaacggcgctacaagca 9498550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 149 - 198
Target Start/End: Original strand, 13112772 - 13112821
Alignment:
Q  149 gagaagacctatttccttaaggttttgggtaagtgtgtgatgtctctctc 198  Q
    ||||||||||||| |||||||||||||||||||  |||| ||||||||||    
T  13112772 gagaagacctattgccttaaggttttgggtaagaatgtggtgtctctctc 13112821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 402 - 466
Target Start/End: Original strand, 35150002 - 35150066
Alignment:
Q  402 ttgtgtgtaagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataa 466  Q
    ||||||| |||||| ||||||||||||||||||| ||| || |||  ||||||||||| ||||||    
T  35150002 ttgtgtgcaagtgtgagttatatgtcccacatcggataaaagagtcaaggttgaacaccttataa 35150066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 376 - 466
Target Start/End: Original strand, 6500791 - 6500881
Alignment:
Q  376 gatggactcacatttgagggggagtgtt-gtgtgtaagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataa 466  Q
    |||||||||||| |||| |||||||||| || || |||||| |||||||||| |||||||| ||| || |||  ||||||||||| ||||||    
T  6500791 gatggactcacacttgatggggagtgttggtttgcaagtgtgagttatatgt-ccacatcggataaaatagtaaaggttgaacaccttataa 6500881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 101 - 152
Target Start/End: Original strand, 31509745 - 31509796
Alignment:
Q  101 atatgtctcacattgtatagaaaagtggaggttgaacaatttataattgaga 152  Q
    ||||||||||||| | ||||||||||||||||||| || ||||||| |||||    
T  31509745 atatgtctcacatcggatagaaaagtggaggttgagcactttataagtgaga 31509796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 400 - 439
Target Start/End: Original strand, 35150740 - 35150779
Alignment:
Q  400 tgttgtgtgtaagtgtaagttatatgtcccacatcgaata 439  Q
    ||||||||| |||||| |||||||||||||||||||||||    
T  35150740 tgttgtgtgcaagtgtgagttatatgtcccacatcgaata 35150779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 400 - 439
Target Start/End: Original strand, 35151031 - 35151070
Alignment:
Q  400 tgttgtgtgtaagtgtaagttatatgtcccacatcgaata 439  Q
    ||||||||| |||||| |||||||||||||||||||||||    
T  35151031 tgttgtgtgcaagtgtgagttatatgtcccacatcgaata 35151070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 400 - 466
Target Start/End: Original strand, 299482 - 299548
Alignment:
Q  400 tgttgtgtgtaagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataa 466  Q
    ||||||| | |||||| ||||||||||||||||||| ||| || |||  ||||||||||| ||||||    
T  299482 tgttgtgcgcaagtgtgagttatatgtcccacatcggataaaacagtaaaggttgaacaccttataa 299548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 408 - 466
Target Start/End: Complemental strand, 3623037 - 3622979
Alignment:
Q  408 gtaagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataa 466  Q
    |||||||| |||||||||||  | |||| ||||||||||||| |||||||||| |||||    
T  3623037 gtaagtgtgagttatatgtcttaaatcggatagaaaagtggaagttgaacactctataa 3622979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 307 - 361
Target Start/End: Original strand, 25328209 - 25328263
Alignment:
Q  307 gttgtggagaaaccagcaacgacgatacaagcaagtaagagcttccgctcgaggg 361  Q
    |||| |||||||  |||||||  |||||||||||||||||||||||||| |||||    
T  25328209 gttgcggagaaaatagcaacggtgatacaagcaagtaagagcttccgcttgaggg 25328263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 400 - 466
Target Start/End: Complemental strand, 34753190 - 34753124
Alignment:
Q  400 tgttgtgtgtaagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataa 466  Q
    ||||||||  || ||||||||||||||||||||| | ||||||||||  | ||||||||| ||||||    
T  34753190 tgttgtgtacaaatgtaagttatatgtcccacattggatagaaaagtaaaagttgaacaccttataa 34753124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 400 - 466
Target Start/End: Complemental strand, 36492382 - 36492316
Alignment:
Q  400 tgttgtgtgtaagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataa 466  Q
    |||||| || |||||| ||||||||||||||||||| ||| || |||  ||||||||||| ||||||    
T  36492382 tgttgtttgcaagtgtgagttatatgtcccacatcggataaaagagtaaaggttgaacaccttataa 36492316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 400 - 449
Target Start/End: Complemental strand, 36527248 - 36527199
Alignment:
Q  400 tgttgtgtgtaagtgtaagttatatgtcccacatcgaatagaaaagtgga 449  Q
    ||||||||  |||||| ||||||||||||||||||  |||||||||||||    
T  36527248 tgttgtgtacaagtgtgagttatatgtcccacatcagatagaaaagtgga 36527199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 80 - 157
Target Start/End: Complemental strand, 36568732 - 36568655
Alignment:
Q  80 tgttgtgtgtaagtgtcagttatatgtctcacattgtatagaaaagtggaggttgaacaatttataattgagaagacc 157  Q
    ||||||||| |||||| ||||||||||| ||||| | ||||||||||  | ||||||||  |||||| ||||| ||||    
T  36568732 tgttgtgtgcaagtgtgagttatatgtcccacatcggatagaaaagtaaaagttgaacaccttataagtgagatgacc 36568655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 484 - 517
Target Start/End: Complemental strand, 42405669 - 42405636
Alignment:
Q  484 cttaaggtttcgggtaagagtgtggtgtctcttg 517  Q
    |||||||||| |||||||||||||||||||||||    
T  42405669 cttaaggttttgggtaagagtgtggtgtctcttg 42405636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 294 - 330
Target Start/End: Original strand, 35150229 - 35150265
Alignment:
Q  294 aggcagccgatccgttgtggagaaaccagcaacgacg 330  Q
    ||||||||| || ||||||||||||||||||||||||    
T  35150229 aggcagccggtctgttgtggagaaaccagcaacgacg 35150265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 67; Significance: 2e-29; HSPs: 62)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 308 - 466
Target Start/End: Original strand, 54108814 - 54108972
Alignment:
Q  308 ttgtggagaaaccagcaacgacgatacaagcaagtaagagcttccgctcga--gggaggcacgattaattgatggactcacatttgagggggagtgttgt 405  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| ||  |||  ||| ||| |||| || |||||||| || ||||||||||||||    
T  54108814 ttgtggagaaaccagcaacggcgatacaagcaagtaagagcttccgcttgaagggggagcatgatgaattaatagactcacacttaagggggagtgttgt 54108913  T
Q  406 gtgtaagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataa 466  Q
    ||| |||||| |||  |||||||||||||| ||| || |||  ||||||||||| ||||||    
T  54108914 gtgcaagtgtcagt--tatgtcccacatcggataaaatagtaaaggttgaacaccttataa 54108972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 313 - 466
Target Start/End: Original strand, 2740973 - 2741130
Alignment:
Q  313 gagaaaccagcaacgacgatacaagcaa-gtaagagcttccgctcga--gggag-gcacgattaattgatggactcacatttgagggggagtgttgtgtg 408  Q
    ||||||||||||||| |||||| ||||| ||||||||||||||| ||  ||||| ||| ||| |||||||||||||||| |||| |||||||||| ||||    
T  2740973 gagaaaccagcaacggcgatacgagcaaagtaagagcttccgcttgaaggggagagcatgatgaattgatggactcacacttgaaggggagtgttatgtg 2741072  T
Q  409 taagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataa 466  Q
     |||||| ||||||||||||||||||  |||||| |||  |||||||| || ||||||    
T  2741073 caagtgtgagttatatgtcccacatcagatagaatagtaaaggttgaataccttataa 2741130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 312 - 466
Target Start/End: Original strand, 20826120 - 20826276
Alignment:
Q  312 ggagaaaccagcaacgacgatacaagcaagtaagagcttccgctcgagggagg--cacgattaattgatggactcacatttgagggggagtgttgtgtgt 409  Q
    |||||||||||||||| |||||||||||||||| ||| |||||| || || ||  || ||| ||| |||||||||||| ||||||||||||||| |||      
T  20826120 ggagaaaccagcaacggcgatacaagcaagtaatagcgtccgcttgaagggggagcatgatgaatagatggactcacacttgagggggagtgttatgtag 20826219  T
Q  410 aagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataa 466  Q
    || ||| ||||||||||||||||||| ||| || |||  | ||||||||| ||||||    
T  20826220 aaatgtgagttatatgtcccacatcggataaaatagtaaaagttgaacacgttataa 20826276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 320 - 466
Target Start/End: Original strand, 44620568 - 44620719
Alignment:
Q  320 cagcaacgacgatacaagcaagtaa-gagcttccgctcgagggag-gcacgattaattgatggactcacatttgagggggagtgt---tgtgtgtaagtg 414  Q
    |||| ||| |||||||| ||||||| |||||||||||   ||| | ||||||| |||||||||||||||| |||||| |||||||   |||||| |||||    
T  44620568 cagccacggcgatacaaacaagtaaagagcttccgcttttgggggagcacgatgaattgatggactcacacttgaggtggagtgtcgttgtgtgcaagtg 44620667  T
Q  415 taagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataa 466  Q
    | ||||||||||||||||||| ||  || ||| |||||||||||||||||||    
T  44620668 tgagttatatgtcccacatcggatgaaatagtagaggttgaacactttataa 44620719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 312 - 405
Target Start/End: Complemental strand, 16889410 - 16889314
Alignment:
Q  312 ggagaaaccagcaacgacgatacaagcaagt-aagagcttccgctcgagggag-gcacgatt-aattgatggactcacatttgagggggagtgttgt 405  Q
    ||||||||||||||||||||||||| ||||| ||||||||||||| ||||| | |||||||| || ||||||||||||| |||||||||||||||||    
T  16889410 ggagaaaccagcaacgacgatacaaacaagtaaagagcttccgcttgagggggagcacgattaaagtgatggactcacacttgagggggagtgttgt 16889314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 313 - 466
Target Start/End: Original strand, 44621327 - 44621485
Alignment:
Q  313 gagaaaccagcaacgacgatacaagcaagtaa-gagcttccgctcgagggag-gcacgattaattgatggactcacatttgagggggagt---gttgtgt 407  Q
    |||| ||||||||||||||||||| ||||||| |||||||||||   ||| | ||||||| |||||||||||||||| ||||||||||||   |||||||    
T  44621327 gagacaccagcaacgacgatacaaacaagtaaagagcttccgcttttgggggagcacgatgaattgatggactcacacttgagggggagtgtcgttgtgt 44621426  T
Q  408 gtaagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataa 466  Q
    | |||||| |||||||||||| |||| | ||| || |||  ||||| ||||| ||||||    
T  44621427 gcaagtgtgagttatatgtccaacatgggataaaacagtaaaggttaaacaccttataa 44621485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 372 - 515
Target Start/End: Original strand, 36629202 - 36629353
Alignment:
Q  372 aattgatggactcacatttgagggggagtgttgtgtgtaagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataattgac 471  Q
    ||||||||| |||||| |||||||||||||||||||  |||||| ||||||||||||||||||| ||||||||||  | ||| ||||| |||||| | |     
T  36629202 aattgatgggctcacacttgagggggagtgttgtgttcaagtgtgagttatatgtcccacatcggatagaaaagtaaaagttaaacaccttataagtaag 36629301  T
Q  472 atgac--------tcattttcttaaggtttcgggtaagagtgtggtgtctct 515  Q
    | |||        |||||  |||||||||| |||||||||||||||||||||    
T  36629302 aggacccataaactcattgccttaaggttttgggtaagagtgtggtgtctct 36629353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 308 - 466
Target Start/End: Complemental strand, 49076710 - 49076545
Alignment:
Q  308 ttgtggagaaaccagcaacgacgatacaagcaagtaagagcttccgctcgagggagg--cacgat--taattgatggactcacatttgagggggag---t 400  Q
    |||||||||||||||||||||| ||||||||||||||||| ||||||| || || ||  || |||   || ||||||||||||| |||||| ||||   |    
T  49076710 ttgtggagaaaccagcaacgacaatacaagcaagtaagagtttccgcttgaagggggaacatgatgaaaagtgatggactcacacttgaggaggagtgtt 49076611  T
Q  401 gttgtgtgtaagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataa 466  Q
    |||||||| |||||| |||||||||| ||| |||| ||| || |||  ||||||||||| ||||||    
T  49076610 gttgtgtgcaagtgtgagttatatgtaccatatcggataaaacagtaaaggttgaacaccttataa 49076545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 399 - 466
Target Start/End: Original strand, 28034221 - 28034288
Alignment:
Q  399 gtgttgtgtgtaagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataa 466  Q
    |||||||||| |||||| | ||||||||||| ||||| ||||||||||||||||||||||||||||||    
T  28034221 gtgttgtgtgcaagtgtgaattatatgtcccgcatcggatagaaaagtggaggttgaacactttataa 28034288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 312 - 434
Target Start/End: Original strand, 39404304 - 39404425
Alignment:
Q  312 ggagaaaccagcaacgacgatacaagcaagtaagagcttccgctcgagggag-gcacgattaattgatggactcacatttgagggggagtgttgt-gtgt 409  Q
    |||||||||| ||||| |||||||||    |||||||||||||| ||||||| ||||||| |||||||||||| ||| |||||| |||||||||| ||||    
T  39404304 ggagaaaccatcaacggcgatacaag----taagagcttccgcttgagggagagcacgatgaattgatggact-acacttgaggaggagtgttgttgtgt 39404398  T
Q  410 a--agtgtaagttatatgtcccacatc 434  Q
    |  ||||| ||||||||||||||||||    
T  39404399 acaagtgtgagttatatgtcccacatc 39404425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 324 - 458
Target Start/End: Complemental strand, 3244692 - 3244556
Alignment:
Q  324 aacgacgatacaagcaagtaagagcttccgctcgagggaggcac--gattaattgatggactcacatttgagggggagtgttgtgtgtaagtgtaagtta 421  Q
    |||||||||||||||||| ||||||||  | | || || || ||  ||| ||| |||||||||||  || |||| |||||||||||| |||||| |||||    
T  3244692 aacgacgatacaagcaagcaagagcttgtgtttgaagggggaacatgatgaatagatggactcacgcttaagggagagtgttgtgtgcaagtgtgagtta 3244593  T
Q  422 tatgtcccacatcgaatagaaaagtggaggttgaaca 458  Q
    |||||| ||||||| ||||||||||  ||||||||||    
T  3244592 tatgtctcacatcggatagaaaagtaaaggttgaaca 3244556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 235 - 335
Target Start/End: Original strand, 45496712 - 45496812
Alignment:
Q  235 gctcccctcaatgacacaatagtggtatcagagccctgctacgacgaagggtaggaccgaggcagccgatccgttgtggagaaaccagcaacgacgatac 334  Q
    |||||||| | |||| ||| |||||||||||||||| | | |||||||||||  ||||||||| |||| || |||| | ||||| |||||||||||||||    
T  45496712 gctccccttactgacccaacagtggtatcagagccccggttcgacgaagggtgcgaccgaggccgccggtcagttgcgtagaaagcagcaacgacgatac 45496811  T
Q  335 a 335  Q
    |    
T  45496812 a 45496812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 400 - 466
Target Start/End: Original strand, 2740693 - 2740759
Alignment:
Q  400 tgttgtgtgtaagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataa 466  Q
    ||||||||| |||||| ||||||||||||||||||| |||||| |||  ||||||||||| ||||||    
T  2740693 tgttgtgtgcaagtgtgagttatatgtcccacatcggatagaacagtaaaggttgaacaccttataa 2740759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 400 - 466
Target Start/End: Original strand, 12197371 - 12197437
Alignment:
Q  400 tgttgtgtgtaagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataa 466  Q
    ||||||||| |||||| ||||||| |||||||||| |||||||||||| ||||| || |||||||||    
T  12197371 tgttgtgtgcaagtgtgagttataggtcccacatcaaatagaaaagtgaaggttcaatactttataa 12197437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 400 - 466
Target Start/End: Original strand, 34544097 - 34544165
Alignment:
Q  400 tgttgtgtgtaagtgtaagttatatgt--cccacatcgaatagaaaagtggaggttgaacactttataa 466  Q
    ||||||| |||||||| |||||||| |  | ||||||||||||||||||||||||||| ||||||||||    
T  34544097 tgttgtgagtaagtgtgagttatatatatctcacatcgaatagaaaagtggaggttgatcactttataa 34544165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 163 - 340
Target Start/End: Original strand, 10246003 - 10246186
Alignment:
Q  163 ccttaaggttttgggtaagtgtgtgatgtctctctcgcttat------gctctagcctcaatgtgggtggtcaccctggctcccctcaatgacacaatag 256  Q
    ||||||||||||||||||| ||||| |||||| || |||| |      | ||||||||| ||||||  | || |||  |||||||||  |||| ||| ||    
T  10246003 ccttaaggttttgggtaagagtgtggtgtctcccttgcttgtctggttgttctagcctcgatgtggacgctcccccaagctcccctcgctgacccaacag 10246102  T
Q  257 tggtatcagagccctgctacgacgaagggtaggaccgaggcagccgatccgttgtggagaaaccagcaacgacgatacaagcaa 340  Q
    |||||||||| ||| | | ||| |||||||| ||| ||||| |||  || |||||| ||||| ||||||||||| |||||||||    
T  10246103 tggtatcagaaccccggttcgatgaagggtacgactgaggccgcctgtcagttgtgcagaaagcagcaacgacggtacaagcaa 10246186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 80 - 152
Target Start/End: Original strand, 28034222 - 28034294
Alignment:
Q  80 tgttgtgtgtaagtgtcagttatatgtctcacattgtatagaaaagtggaggttgaacaatttataattgaga 152  Q
    ||||||||| |||||| | ||||||||| | ||| | |||||||||||||||||||||| ||||||| |||||    
T  28034222 tgttgtgtgcaagtgtgaattatatgtcccgcatcggatagaaaagtggaggttgaacactttataagtgaga 28034294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 400 - 515
Target Start/End: Original strand, 3700358 - 3700473
Alignment:
Q  400 tgttgtgtgtaagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataattgacatgactcattttcttaaggtttcgggta 499  Q
    ||||||||| |||||| |||||||||||| |||||| ||| || |||  | ||||||||| |||||| | | | ||||||||  |||||||||| || ||    
T  3700358 tgttgtgtgcaagtgtgagttatatgtcctacatcggataaaagagtaaatgttgaacaccttataagtaaaaggactcattgccttaaggttttggata 3700457  T
Q  500 agagtgtggtgtctct 515  Q
    ||||| || |||||||    
T  3700458 agagtatgatgtctct 3700473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 312 - 355
Target Start/End: Complemental strand, 22028241 - 22028198
Alignment:
Q  312 ggagaaaccagcaacgacgatacaagcaagtaagagcttccgct 355  Q
    ||||||||||||||||||||| ||||||||||||||||| ||||    
T  22028241 ggagaaaccagcaacgacgattcaagcaagtaagagctttcgct 22028198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 77 - 157
Target Start/End: Original strand, 34544094 - 34544176
Alignment:
Q  77 aattgttgtgtgtaagtgtcagttatatgt--ctcacattgtatagaaaagtggaggttgaacaatttataattgagaagacc 157  Q
    |||||||||| |||||||| |||||||| |  ||||||| | ||||||||||||||||||| || ||||||| ||||| ||||    
T  34544094 aattgttgtgagtaagtgtgagttatatatatctcacatcgaatagaaaagtggaggttgatcactttataaatgagaggacc 34544176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 255 - 337
Target Start/End: Original strand, 44621180 - 44621263
Alignment:
Q  255 agtggtatcagagccctgctacgacgaagggtaggaccgaggcagccgatccgttgt-ggagaaaccagcaacgacgatacaag 337  Q
    |||||||||||||||||| |  ||||||||||| ||||||| |||||| |||||| | | ||||| |||||||| |||||||||    
T  44621180 agtggtatcagagccctggtttgacgaagggtacgaccgagacagccggtccgttttcgcagaaagcagcaacggcgatacaag 44621263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 412 - 466
Target Start/End: Original strand, 760194 - 760248
Alignment:
Q  412 gtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataa 466  Q
    |||| |||||||||||||||||||||||||||| || |||||||  |||||||||    
T  760194 gtgtgagttatatgtcccacatcgaatagaaaaatgaaggttgagaactttataa 760248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 255 - 309
Target Start/End: Original strand, 2740872 - 2740925
Alignment:
Q  255 agtggtatcagagccctgctacgacgaagggtaggaccgaggcagccgatccgtt 309  Q
    |||||||||||||||| | | |||||||||||| |||||||||||||||||||||    
T  2740872 agtggtatcagagccccgtt-cgacgaagggtacgaccgaggcagccgatccgtt 2740925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 80 - 138
Target Start/End: Complemental strand, 3244614 - 3244556
Alignment:
Q  80 tgttgtgtgtaagtgtcagttatatgtctcacattgtatagaaaagtggaggttgaaca 138  Q
    ||||||||| |||||| ||||||||||||||||| | ||||||||||  ||||||||||    
T  3244614 tgttgtgtgcaagtgtgagttatatgtctcacatcggatagaaaagtaaaggttgaaca 3244556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 365 - 466
Target Start/End: Original strand, 3341083 - 3341187
Alignment:
Q  365 cacgattaattgatggactcacatttgagggggagtgttgt---gtgtaagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactt 461  Q
    |||||| || ||||||||||||| ||||||  |||||||||   ||| |||||| ||||||||||||||||| | ||| || |||  ||||| |||||||    
T  3341083 cacgataaagtgatggactcacacttgaggcagagtgttgttgtgtgcaagtgtgagttatatgtcccacattggataaaagagtaaaggttaaacactt 3341182  T
Q  462 tataa 466  Q
    |||||    
T  3341183 tataa 3341187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 400 - 466
Target Start/End: Original strand, 52884688 - 52884754
Alignment:
Q  400 tgttgtgtgtaagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataa 466  Q
    ||||||||| |||||| ||||||||||||||||||| ||| || |||  ||||||||||| ||||||    
T  52884688 tgttgtgtgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataa 52884754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 400 - 466
Target Start/End: Original strand, 52884880 - 52884946
Alignment:
Q  400 tgttgtgtgtaagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataa 466  Q
    ||||||||| |||||| ||||||||||||||||||| ||| || |||  ||||||||||| ||||||    
T  52884880 tgttgtgtgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataa 52884946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 400 - 466
Target Start/End: Complemental strand, 54741341 - 54741275
Alignment:
Q  400 tgttgtgtgtaagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataa 466  Q
    ||||||||| |||||| | ||||||||| ||||||| ||||||||||  ||||||||||| ||||||    
T  54741341 tgttgtgtgcaagtgtgaattatatgtctcacatcggatagaaaagtaaaggttgaacaccttataa 54741275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 421 - 462
Target Start/End: Complemental strand, 15841510 - 15841469
Alignment:
Q  421 atatgtcccacatcgaatagaaaagtggaggttgaacacttt 462  Q
    ||||||| |||||| |||||||||||||||||||||||||||    
T  15841510 atatgtctcacatcaaatagaaaagtggaggttgaacacttt 15841469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 405 - 458
Target Start/End: Original strand, 49302902 - 49302955
Alignment:
Q  405 tgtgtaagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaaca 458  Q
    ||||||||||| |||||||||||||||||| |||| ||||||  ||||||||||    
T  49302902 tgtgtaagtgtgagttatatgtcccacatcaaataaaaaagtaaaggttgaaca 49302955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 101 - 198
Target Start/End: Complemental strand, 15841510 - 15841405
Alignment:
Q  101 atatgtctcacattgtatagaaaagtggaggttgaacaatttataattgagaaga--------cctatttccttaaggttttgggtaagtgtgtgatgtc 192  Q
    |||||||||||||   |||||||||||||||||||||| ||| ||| ||||| ||        |  ||| ||||||||||||||||||| ||||||||||    
T  15841510 atatgtctcacatcaaatagaaaagtggaggttgaacactttgtaagtgagaggattcataaacacattgccttaaggttttgggtaagagtgtgatgtc 15841411  T
Q  193 tctctc 198  Q
    ||||||    
T  15841410 tctctc 15841405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 410 - 466
Target Start/End: Complemental strand, 16888969 - 16888913
Alignment:
Q  410 aagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataa 466  Q
    |||||| ||||||||||||||||||| ||||||||||  |||||||| || ||||||    
T  16888969 aagtgtgagttatatgtcccacatcggatagaaaagtaaaggttgaataccttataa 16888913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 155 - 195
Target Start/End: Original strand, 18879882 - 18879922
Alignment:
Q  155 acctatttccttaaggttttgggtaagtgtgtgatgtctct 195  Q
    ||||||||||||||||||||||||||| |||||| ||||||    
T  18879882 acctatttccttaaggttttgggtaagagtgtgacgtctct 18879922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 163 - 339
Target Start/End: Original strand, 20825920 - 20826103
Alignment:
Q  163 ccttaaggttttgggtaagtgtgtgatgtctctctcgcttatgc------tctagcctcaatgtgggtggtcaccctggctcccctcaatgacacaatag 256  Q
    ||||||||||||||||||| ||||| ||| |||||  |||||||      ||||||||  ||||||   ||| |||  |||||| |||||||  ||| ||    
T  20825920 ccttaaggttttgggtaagagtgtggtgtttctcttccttatgcggttgttctagccttgatgtggacagtcccccatgctcccttcaatgatccaacag 20826019  T
Q  257 tggtatcagagccctgctacgacgaagggtaggaccgaggcagccgatcc-gttgtggagaaaccagcaacgacgatacaagca 339  Q
    ||| ||||||||||   | |||||||||||| |||||||||||||| |||  ||| | ||||| |||||||| || ||||||||    
T  20826020 tggcatcagagccccaattcgacgaagggtacgaccgaggcagccggtccatttgcgcagaaagcagcaacggcggtacaagca 20826103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 475 - 515
Target Start/End: Original strand, 45496881 - 45496921
Alignment:
Q  475 actcattttcttaaggtttcgggtaagagtgtggtgtctct 515  Q
    ||||||| ||||||||||| |||||||||||||||||||||    
T  45496881 actcattgtcttaaggttttgggtaagagtgtggtgtctct 45496921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 158 - 205
Target Start/End: Complemental strand, 22028038 - 22027991
Alignment:
Q  158 tatttccttaaggttttgggtaagtgtgtgatgtctctctcgcttatg 205  Q
    |||| |||||||||||||||||||  |||| |||||||||||||||||    
T  22028038 tattgccttaaggttttgggtaagaatgtggtgtctctctcgcttatg 22027991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 311 - 361
Target Start/End: Complemental strand, 23817554 - 23817503
Alignment:
Q  311 tggagaaaccagcaacgacgatacaagcaagt-aagagcttccgctcgaggg 361  Q
    |||||||||||||||| ||||||||| ||||| ||||||||||||| |||||    
T  23817554 tggagaaaccagcaacaacgatacaaacaagtaaagagcttccgcttgaggg 23817503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 312 - 355
Target Start/End: Original strand, 43174426 - 43174469
Alignment:
Q  312 ggagaaaccagcaacgacgatacaagcaagtaagagcttccgct 355  Q
    |||||||||| ||||| |||||||| ||||||||||||||||||    
T  43174426 ggagaaaccaacaacggcgatacaaacaagtaagagcttccgct 43174469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 96 - 202
Target Start/End: Complemental strand, 54343148 - 54343041
Alignment:
Q  96 cagttatatgtctcacattgtatagaaaagtggaggttgaacaatttataattgagaagacct-atttccttaaggttttgggtaagtgtgtgatgtctc 194  Q
    |||||||||||| ||||| | ||| || |||  ||||||||||  |||||| | ||| ||||  ||| ||||||||||||||||||| ||||| ||||||    
T  54343148 cagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggaccccattgccttaaggttttgggtaagagtgtggtgtctc 54343049  T
Q  195 tctcgctt 202  Q
    ||| ||||    
T  54343048 tcttgctt 54343041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 400 - 466
Target Start/End: Original strand, 10245913 - 10245979
Alignment:
Q  400 tgttgtgtgtaagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataa 466  Q
    ||||||||| |||||| ||||||||| ||||||||| ||| || |||  ||||||||||| ||||||    
T  10245913 tgttgtgtgcaagtgtgagttatatgccccacatcggataaaagagtaaaggttgaacaccttataa 10245979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 400 - 466
Target Start/End: Complemental strand, 11348491 - 11348425
Alignment:
Q  400 tgttgtgtgtaagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataa 466  Q
    ||||||||| || ||| |||||||||| | |||||  ||| || |||||||||||||||||||||||    
T  11348491 tgttgtgtgcaattgtgagttatatgttctacatcagataaaatagtggaggttgaacactttataa 11348425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 400 - 466
Target Start/End: Original strand, 36572012 - 36572078
Alignment:
Q  400 tgttgtgtgtaagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataa 466  Q
    ||||||||  |||||| ||||||||||||||||||||||| || |||  | ||||||||| ||||||    
T  36572012 tgttgtgtacaagtgtgagttatatgtcccacatcgaataaaagagtaaatgttgaacaccttataa 36572078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 400 - 466
Target Start/End: Complemental strand, 39793023 - 39792957
Alignment:
Q  400 tgttgtgtgtaagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataa 466  Q
    ||||||||  |||||| ||||||||||||||||||  ||||||||||  | ||||||||| ||||||    
T  39793023 tgttgtgtacaagtgtgagttatatgtcccacatcagatagaaaagtaaatgttgaacaccttataa 39792957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 410 - 460
Target Start/End: Complemental strand, 50788136 - 50788086
Alignment:
Q  410 aagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacact 460  Q
    |||||||||||||||||||||||||| ||| || |||  ||||||||||||    
T  50788136 aagtgtaagttatatgtcccacatcggataaaatagtaaaggttgaacact 50788086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 163 - 205
Target Start/End: Complemental strand, 54017667 - 54017625
Alignment:
Q  163 ccttaaggttttgggtaagtgtgtgatgtctctctcgcttatg 205  Q
    |||||||||||| |||||| ||||||||||||||| |||||||    
T  54017667 ccttaaggttttaggtaagagtgtgatgtctctcttgcttatg 54017625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 80 - 138
Target Start/End: Complemental strand, 54741341 - 54741283
Alignment:
Q  80 tgttgtgtgtaagtgtcagttatatgtctcacattgtatagaaaagtggaggttgaaca 138  Q
    ||||||||| |||||| | ||||||||||||||| | ||||||||||  ||||||||||    
T  54741341 tgttgtgtgcaagtgtgaattatatgtctcacatcggatagaaaagtaaaggttgaaca 54741283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 155 - 204
Target Start/End: Original strand, 3271863 - 3271911
Alignment:
Q  155 acctatttccttaaggttttgggtaagtgtgtgatgtctctctcgcttat 204  Q
    ||||||| ||||||||||||||||||| ||||| ||||||||||| ||||    
T  3271863 acctattgccttaaggttttgggtaagagtgtg-tgtctctctcgtttat 3271911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 405 - 466
Target Start/End: Complemental strand, 23557024 - 23556963
Alignment:
Q  405 tgtgtaagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataa 466  Q
    |||| |||||| ||||| ||||   |||||| |||||||||||||||||||||| |||||||    
T  23557024 tgtgcaagtgtgagttaaatgttttacatcggatagaaaagtggaggttgaacattttataa 23556963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 146
Target Start/End: Complemental strand, 23557024 - 23556963
Alignment:
Q  85 tgtgtaagtgtcagttatatgtctcacattgtatagaaaagtggaggttgaacaatttataa 146  Q
    |||| |||||| ||||| |||| | |||| | |||||||||||||||||||||| |||||||    
T  23557024 tgtgcaagtgtgagttaaatgttttacatcggatagaaaagtggaggttgaacattttataa 23556963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 478 - 515
Target Start/End: Complemental strand, 36608738 - 36608701
Alignment:
Q  478 cattttcttaaggtttcgggtaagagtgtggtgtctct 515  Q
    |||| ||||||||||| |||||||||||||||||||||    
T  36608738 cattgtcttaaggttttgggtaagagtgtggtgtctct 36608701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 165 - 330
Target Start/End: Original strand, 39404104 - 39404275
Alignment:
Q  165 ttaaggttttgggtaagtgtgtgatgtctctctcgcttatgc------tctagcctcaatgtgggtggtcaccctggctcccctcaatgacacaatagtg 258  Q
    ||||||||||||||||| |||||  |||||||| |||| ||       ||||||||| ||||||  |||| |||  |||||||||| | |  ||| ||||    
T  39404104 ttaaggttttgggtaagagtgtggcgtctctcttgcttgtgtggttgttctagcctcgatgtggacggtcccccgagctcccctcactaatccaacagtg 39404203  T
Q  259 gtatcagagccctgctacgacgaagggtaggaccgaggcagccgatccg-ttgtggagaaaccagcaacgacg 330  Q
    |||||||  | ||| | |||||||||||| |||||||||||||| |||| ||| | ||||| |||||||||||    
T  39404204 gtatcaggacactgtt-cgacgaagggtatgaccgaggcagccggtccgtttgcgtagaaagcagcaacgacg 39404275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 478 - 515
Target Start/End: Original strand, 50002505 - 50002542
Alignment:
Q  478 cattttcttaaggtttcgggtaagagtgtggtgtctct 515  Q
    |||| ||||||||||| |||||||||||||||||||||    
T  50002505 cattgtcttaaggttttgggtaagagtgtggtgtctct 50002542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 80 - 160
Target Start/End: Original strand, 2740693 - 2740773
Alignment:
Q  80 tgttgtgtgtaagtgtcagttatatgtctcacattgtatagaaaagtggaggttgaacaatttataattgagaagacctat 160  Q
    ||||||||| |||||| ||||||||||| ||||| | |||||| |||  ||||||||||  |||||| | ||| |||||||    
T  2740693 tgttgtgtgcaagtgtgagttatatgtcccacatcggatagaacagtaaaggttgaacaccttataagtaagaggacctat 2740773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 90 - 138
Target Start/End: Complemental strand, 7147794 - 7147746
Alignment:
Q  90 aagtgtcagttatatgtctcacattgtatagaaaagtggaggttgaaca 138  Q
    |||||| ||||| | |||||||||||  |||||||||||||||||||||    
T  7147794 aagtgtgagttagaagtctcacattgcttagaaaagtggaggttgaaca 7147746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 204 - 264
Target Start/End: Complemental strand, 11783578 - 11783519
Alignment:
Q  204 tgctctagcctcaatgtgggtggtcaccctggctcccctcaatgacacaatagtggtatca 264  Q
    |||||||||||  |||||||||||| ||||||| |||||| ||||| ||| ||||||||||    
T  11783578 tgctctagcctagatgtgggtggtccccctggcacccctc-atgacccaacagtggtatca 11783519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 475 - 515
Target Start/End: Complemental strand, 22028449 - 22028409
Alignment:
Q  475 actcattttcttaaggtttcgggtaagagtgtggtgtctct 515  Q
    ||||||| |||||| |||| |||||||||||||||||||||    
T  22028449 actcattgtcttaatgttttgggtaagagtgtggtgtctct 22028409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 475 - 515
Target Start/End: Complemental strand, 23817761 - 23817721
Alignment:
Q  475 actcattttcttaaggtttcgggtaagagtgtggtgtctct 515  Q
    |||||||  |||||||||| |||||||||||||||||||||    
T  23817761 actcattgccttaaggttttgggtaagagtgtggtgtctct 23817721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 475 - 515
Target Start/End: Complemental strand, 34646729 - 34646689
Alignment:
Q  475 actcattttcttaaggtttcgggtaagagtgtggtgtctct 515  Q
    |||||||  |||||||||| |||||||||||||||||||||    
T  34646729 actcattgccttaaggttttgggtaagagtgtggtgtctct 34646689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 410 - 466
Target Start/End: Original strand, 39404021 - 39404077
Alignment:
Q  410 aagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataa 466  Q
    |||||| |||||||||||| |||| ||||| || |||  ||||||||||||||||||    
T  39404021 aagtgtgagttatatgtcctacattgaataaaagagtaaaggttgaacactttataa 39404077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 475 - 515
Target Start/End: Complemental strand, 39792940 - 39792900
Alignment:
Q  475 actcattttcttaaggtttcgggtaagagtgtggtgtctct 515  Q
    |||||||  |||||||||| |||||||||||||||||||||    
T  39792940 actcattgccttaaggttttgggtaagagtgtggtgtctct 39792900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 475 - 511
Target Start/End: Original strand, 44621078 - 44621114
Alignment:
Q  475 actcattttcttaaggtttcgggtaagagtgtggtgt 511  Q
    ||||||| ||||||||||| |||||||||||||||||    
T  44621078 actcattgtcttaaggttttgggtaagagtgtggtgt 44621114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 410 - 466
Target Start/End: Original strand, 49880163 - 49880219
Alignment:
Q  410 aagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataa 466  Q
    |||||| ||||||||||||||||| ||||| || |||  ||||||||||| ||||||    
T  49880163 aagtgtgagttatatgtcccacattgaataaaatagtaaaggttgaacaccttataa 49880219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0391 (Bit Score: 66; Significance: 6e-29; HSPs: 3)
Name: scaffold0391
Description:

Target: scaffold0391; HSP #1
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 312 - 466
Target Start/End: Complemental strand, 1364 - 1205
Alignment:
Q  312 ggagaaaccagcaacgacgatacaagcaagtaagagcttccgctcga--gggaggcacgattaattgatggactcacatttgagggggagtgttg-tgtg 408  Q
    |||||||||||||||||||||||||||||||||||||||||||||||  |||  ||| ||| ||  |||||||||||| |||||||||| ||||| ||||    
T  1364 ggagaaaccagcaacgacgatacaagcaagtaagagcttccgctcgaagggggagcatgatcaaaagatggactcacacttgagggggaatgttgttgtg 1265  T
Q  409 t--aagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataa 466  Q
    |  |||||| ||||||||||||||||| | ||| || |||  ||||||||||| ||||||    
T  1264 tacaagtgtgagttatatgtcccacattggataaaagagtaaaggttgaacaccttataa 1205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0391; HSP #2
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 312 - 458
Target Start/End: Complemental strand, 3244 - 3092
Alignment:
Q  312 ggagaaaccagcaacgacgatacaag-caagtaagagcttccgctcgagggagg--cacgattaattgatggactcacatttgagggggagtg---ttgt 405  Q
    |||||| ||| ||||| ||||||||  |||||||||||||||||| || || ||  || ||| | |||||||||||||| |||||||||||||   ||||    
T  3244 ggagaacccaacaacggcgatacaaatcaagtaagagcttccgcttgaagggggagcatgatgagttgatggactcacacttgagggggagtgttgttgt 3145  T
Q  406 gtgtaagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaaca 458  Q
    ||| | |||| ||||||||||||||||||| ||| || |||  ||||||||||    
T  3144 gtgcaggtgtgagttatatgtcccacatcggataaaagagtaaaggttgaaca 3092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0391; HSP #3
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 256 - 337
Target Start/End: Complemental strand, 1465 - 1383
Alignment:
Q  256 gtggtatcagagccctgctacgacgaagggtaggaccgaggcagccgatccg-ttgtggagaaaccagcaacgacgatacaag 337  Q
    ||||||||||||||| | | |||||||||||| |||||||||||||| |||| ||||| ||||| |||||||| || ||||||    
T  1465 gtggtatcagagccccggttcgacgaagggtatgaccgaggcagccggtccgtttgtgcagaaagcagcaacggcggtacaag 1383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0734 (Bit Score: 57; Significance: 1e-23; HSPs: 2)
Name: scaffold0734
Description:

Target: scaffold0734; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 313 - 466
Target Start/End: Original strand, 5678 - 5836
Alignment:
Q  313 gagaaaccagcaacgacgatacaagcaa-gtaagagcttccgctcgagggag-gcacgattaattgatggactcacatttgagggggagtgttgt---gt 407  Q
    |||||||||| |||| ||| ||| |||| ||||||||||||||| ||||| | ||| ||| |||||||||||||||| |||||||||||||||||   ||    
T  5678 gagaaaccagtaacggcgacacatgcaaagtaagagcttccgcttgagggggagcaagatgaattgatggactcacacttgagggggagtgttgttgtgt 5777  T
Q  408 gtaagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataa 466  Q
    | |||||| ||||||||||| ||||||| ||| || |||  ||||||||||| ||||||    
T  5778 gcaagtgtgagttatatgtcgcacatcggataaaatagtaaaggttgaacaccttataa 5836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0734; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 400 - 466
Target Start/End: Original strand, 5389 - 5455
Alignment:
Q  400 tgttgtgtgtaagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataa 466  Q
    ||||||||| |||||| |||||||||||| |||||| ||| || |||  ||||||||||| ||||||    
T  5389 tgttgtgtgcaagtgtgagttatatgtcctacatcggataaaatagtaaaggttgaacaccttataa 5455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 49; Significance: 9e-19; HSPs: 3)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 372 - 475
Target Start/End: Original strand, 39802 - 39906
Alignment:
Q  372 aattgatggactcacatttgagggggagt-gttgtgtgtaagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataattga 470  Q
    |||||||| ||||||| |||||||||| | |||||||  |||||| ||||||||||||||||||| |||||||||||| ||||| || |||||||| |||    
T  39802 aattgatgaactcacacttgagggggaattgttgtgttcaagtgtgagttatatgtcccacatcggatagaaaagtggtggttggactctttataagtga 39901  T
Q  471 catga 475  Q
     ||||    
T  39902 gatga 39906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 77 - 152
Target Start/End: Original strand, 39828 - 39903
Alignment:
Q  77 aattgttgtgtgtaagtgtcagttatatgtctcacattgtatagaaaagtggaggttgaacaatttataattgaga 152  Q
    |||||||||||  |||||| ||||||||||| ||||| | |||||||||||| ||||| ||  ||||||| |||||    
T  39828 aattgttgtgttcaagtgtgagttatatgtcccacatcggatagaaaagtggtggttggactctttataagtgaga 39903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113; HSP #3
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 410 - 466
Target Start/End: Original strand, 39460 - 39515
Alignment:
Q  410 aagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataa 466  Q
    |||||| ||||||||||| |||| || ||||||||||||||||||||| | ||||||    
T  39460 aagtgtgagttatatgtctcaca-cgcatagaaaagtggaggttgaactccttataa 39515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 48; Significance: 3e-18; HSPs: 2)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 339 - 466
Target Start/End: Original strand, 5284 - 5416
Alignment:
Q  339 aagtaagagcttccgctcgagggagg--cacgattaattgatggactcacatttgagggggagt---gttgtgtgtaagtgtaagttatatgtcccacat 433  Q
    ||||||||||||||||| || || ||  |||||| || ||||||||||||| ||||||| ||||   |||||||| |||||| |||||||||| ||||||    
T  5284 aagtaagagcttccgcttgaagggggagcacgatgaactgatggactcacacttgagggagagttttgttgtgtgcaagtgtgagttatatgttccacat 5383  T
Q  434 cgaatagaaaagtggaggttgaacactttataa 466  Q
    || |||||| |||  ||||||||||| ||||||    
T  5384 cggatagaacagtaaaggttgaacaccttataa 5416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 163 - 206
Target Start/End: Original strand, 5066 - 5109
Alignment:
Q  163 ccttaaggttttgggtaagtgtgtgatgtctctctcgcttatgc 206  Q
    ||||| ||||||||||||| ||||| ||||||||||||||||||    
T  5066 ccttatggttttgggtaagagtgtggtgtctctctcgcttatgc 5109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0702 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0702
Description:

Target: scaffold0702; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 377 - 466
Target Start/End: Complemental strand, 330 - 241
Alignment:
Q  377 atggactcacatttgagggggagtgttg-tgtgtaagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataa 466  Q
    ||||||||||||||| |||||||||||| | || |||||| ||||||||||||||||||| ||| || |||  ||||||||||| ||||||    
T  330 atggactcacatttg-gggggagtgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataa 241  T

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Target: scaffold0171 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 376 - 459
Target Start/End: Complemental strand, 17648 - 17562
Alignment:
Q  376 gatggactcacatttgagggggagtg---ttgtgtgtaagtgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacac 459  Q
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T  17648 gatggactcacacttgagggggagtgttgttgtgtgcaagtgtgagttatatgtcacacatcagataaaatagtaaaggttgaacac 17562  T

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