View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16024_low_7 (Length: 288)
Name: NF16024_low_7
Description: NF16024
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16024_low_7 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 256; Significance: 1e-142; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 14 - 288
Target Start/End: Original strand, 329142 - 329414
Alignment:
| Q |
14 |
aatatcaatgattttgtcgtaacacattccaaaaccttgtttaattaccctggcttattgacatgctggcaataattacattcaaaattaatcttgcaga |
113 |
Q |
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| T |
329142 |
aatatcaatgattttgtcgtaacacattccaaaaccttgtttaattaccctggcttattgacatgctggcaataatgacattcaaaattaatcttgcaga |
329241 |
T |
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| Q |
114 |
gctgacatttggtcatttggcataactgcattggagcttgcccatggccatgctcctttctcaaaatatccaccattgaaggtgtgtgtgcacatactat |
213 |
Q |
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| T |
329242 |
gctgacatttggtcatttggcataactgcattggagcttgcccatggccatgctcctttctcaaaatatccaccattgaaggtgtgtgtgcacatactat |
329341 |
T |
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| Q |
214 |
catagtatttgctataagcactcaaaattttattccatttttctttgtttaatttcataataattaaactttcca |
288 |
Q |
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||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||| |
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| T |
329342 |
catagtatttgctataagcactcaaaattttatcccatttttc--tgtttaatttcataataattaaactttcca |
329414 |
T |
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