View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16024_low_8 (Length: 269)
Name: NF16024_low_8
Description: NF16024
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16024_low_8 |
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Alignment Details
Target: chr4 (Bit Score: 254; Significance: 1e-141; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 1 - 254
Target Start/End: Original strand, 329599 - 329852
Alignment:
| Q |
1 |
taagcagatgattgcttgttgtttggtaaaagatccttcaaaacgaccctctgctagcaagttgttaaagcattccttctttaagcaagctcgctccagt |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
329599 |
taagcagatgattgcttgttgtttggtaaaagatccttcaaaacgaccctctgctagcaagttgttaaagcattccttctttaagcaagctcgctccagt |
329698 |
T |
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| Q |
101 |
gattatattacgcgaactcttttggagggcctgcctgctttgggtgatcgcatggagattctaaaggttgctttgcttccactttaagttaatagcacat |
200 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
329699 |
gattatattacgcgaactcttttggagggcctgcctgctttgggtgatcgcatggagattctaaaggttgctttgcttccactttaagttaatagcacat |
329798 |
T |
|
| Q |
201 |
atcttatatatttatatttgcaccctcccagttccacccttgttatgatatata |
254 |
Q |
| |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
329799 |
atcttatatatttatatttgcaccctcccagttccacccttgttatgatatata |
329852 |
T |
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