View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF16025_high_12 (Length: 227)
Name: NF16025_high_12
Description: NF16025
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16025_high_12 |
 |  |
|
| [»] chr7 (2 HSPs) |
 |  |
|
| [»] scaffold0010 (1 HSPs) |
 |  |
|
| [»] scaffold0408 (1 HSPs) |
 |  |
|
| [»] chr6 (5 HSPs) |
 |  |
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| [»] scaffold1043 (1 HSPs) |
 |  |
|
| [»] chr5 (6 HSPs) |
 |  |
|
| [»] chr4 (11 HSPs) |
 |  |
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| [»] scaffold0061 (2 HSPs) |
 |  |  |
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| [»] chr2 (4 HSPs) |
 |  |
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| [»] chr3 (8 HSPs) |
 |  |
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| [»] scaffold0364 (1 HSPs) |
 |  |  |
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| [»] scaffold0118 (1 HSPs) |
 |  |
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| [»] scaffold0385 (1 HSPs) |
 |  |
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| [»] scaffold0290 (1 HSPs) |
 |  |
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| [»] chr8 (4 HSPs) |
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| [»] scaffold0207 (1 HSPs) |
 |  |  |
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| [»] scaffold0094 (1 HSPs) |
 |  |  |
|
| [»] scaffold0381 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr7 (Bit Score: 200; Significance: 1e-109; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 12 - 227
Target Start/End: Original strand, 16067944 - 16068159
Alignment:
| Q |
12 |
gagatgaataagcattgatgttattctttagatgacaagtagtgactgttccaacttattatgtagatgacactcttaaggagtatcttaggccaacgag |
111 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
16067944 |
gagatgaataagcattgatgttattctttagatgacaagtagtgactgttccaacttattatgtagatgacactcttaaggagtatcttaggccaacaag |
16068043 |
T |
 |
| Q |
112 |
gggatagattagatgtaagagagagaatctttgcaatttagggtatcttaatctatgacgggagggttgtcttaaattttaatatgttgttactgttatg |
211 |
Q |
| |
|
|||||| |||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16068044 |
gggataaattagatgtaagggggagaatctttgcaatttagggtatcttaatctatgacgggagggttgtcttaaattttaatatgttgttactgttatg |
16068143 |
T |
 |
| Q |
212 |
atgtgaattttgatga |
227 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
16068144 |
atgtgaattttgatga |
16068159 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 134 - 227
Target Start/End: Original strand, 9692997 - 9693090
Alignment:
| Q |
134 |
gagaatctttgcaatttagggtatcttaatctatgacgggagggttgtcttaaattttaatatgttgttactgttatgatgtgaattttgatga |
227 |
Q |
| |
|
||||||||||||| ||||| |||||||||||||||| ||||||||||||||||||||||||| |||||| |||||||||| ||| |||||||| |
|
|
| T |
9692997 |
gagaatctttgcactttagagtatcttaatctatgatgggagggttgtcttaaattttaataagttgttgatgttatgatgagaagtttgatga |
9693090 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0010 (Bit Score: 149; Significance: 7e-79; HSPs: 1)
Name: scaffold0010
Description:
Target: scaffold0010; HSP #1
Raw Score: 149; E-Value: 7e-79
Query Start/End: Original strand, 11 - 227
Target Start/End: Complemental strand, 143331 - 143115
Alignment:
| Q |
11 |
tgagatgaataagcattgatgttattctttagatgacaagtagtgactgttccaacttattatgtagatgacactcttaaggagtatcttaggccaacga |
110 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||||||||| ||||||| |||| |||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
143331 |
tgagatgaataagcattgatgtcattctttagatgacaagtagtgattgttccagcttacgttgtagatgacgctcttaaggagtatcttaggccaacga |
143232 |
T |
 |
| Q |
111 |
ggggatagattagatgtaagagagagaatctttgcaatttagggtatcttaatctatgacgggagggttgtcttaaattttaatatgttgttactgttat |
210 |
Q |
| |
|
| |||||||||||||||||| | | |||||||| || |||| ||||||||||||||||| |||| |||||||||||||||||| |||||||||||||||| |
|
|
| T |
143231 |
gtggatagattagatgtaagggggtgaatcttttcactttatggtatcttaatctatgatgggaaggttgtcttaaattttaaaatgttgttactgttat |
143132 |
T |
 |
| Q |
211 |
gatgtgaattttgatga |
227 |
Q |
| |
|
||||||||||||||||| |
|
|
| T |
143131 |
gatgtgaattttgatga |
143115 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0408 (Bit Score: 145; Significance: 2e-76; HSPs: 1)
Name: scaffold0408
Description:
Target: scaffold0408; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 19 - 227
Target Start/End: Complemental strand, 15205 - 14997
Alignment:
| Q |
19 |
ataagcattgatgttattctttagatgacaagtagtgactgttccaacttattatgtagatgacactcttaaggagtatcttaggccaacgaggggatag |
118 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |||||| ||||| || ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15205 |
ataagcattgatgttattctttagatgacaagtagtgatggttccagcttatgttgaagatgacactcttaaggagtatcttaggccaacgaggggatag |
15106 |
T |
 |
| Q |
119 |
attagatgtaagagagagaatctttgcaatttagggtatcttaatctatgacgggagggttgtcttaaattttaatatgttgttactgttatgatgtgaa |
218 |
Q |
| |
|
|||||||||||| | ||||||||||||| | |||||||||||||||||||| | || ||||| |||||||||||| |||||||||||||||||||||||| |
|
|
| T |
15105 |
attagatgtaagggggagaatctttgcactatagggtatcttaatctatgaggagaaggttgacttaaattttaaaatgttgttactgttatgatgtgaa |
15006 |
T |
 |
| Q |
219 |
ttttgatga |
227 |
Q |
| |
|
|||| |||| |
|
|
| T |
15005 |
tttttatga |
14997 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 145; Significance: 2e-76; HSPs: 5)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 19 - 227
Target Start/End: Complemental strand, 14746770 - 14746562
Alignment:
| Q |
19 |
ataagcattgatgttattctttagatgacaagtagtgactgttccaacttattatgtagatgacactcttaaggagtatcttaggccaacgaggggatag |
118 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |||||| ||||| || ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14746770 |
ataagcattgatgttattctttagatgacaagtagtgatggttccagcttatgttgaagatgacactcttaaggagtatcttaggccaacgaggggatag |
14746671 |
T |
 |
| Q |
119 |
attagatgtaagagagagaatctttgcaatttagggtatcttaatctatgacgggagggttgtcttaaattttaatatgttgttactgttatgatgtgaa |
218 |
Q |
| |
|
|||||||||||| | ||||||||||||| | |||||||||||||||||||| | || ||||| |||||||||||| |||||||||||||||||||||||| |
|
|
| T |
14746670 |
attagatgtaagggggagaatctttgcactatagggtatcttaatctatgaggagaaggttgacttaaattttaaaatgttgttactgttatgatgtgaa |
14746571 |
T |
 |
| Q |
219 |
ttttgatga |
227 |
Q |
| |
|
|||| |||| |
|
|
| T |
14746570 |
tttttatga |
14746562 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 11 - 183
Target Start/End: Original strand, 22395344 - 22395516
Alignment:
| Q |
11 |
tgagatgaataagcattgatgttattctttagatgacaagtagtgactgttccaacttattatgtagatgacactcttaaggagtatcttaggccaacga |
110 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||||| |||||| ||||| |||||||| | ||| |||||| ||||||||||||| || |
|
|
| T |
22395344 |
tgaggtgaataagcattgatgttattctttagatgacaagtagtgatggttccagcttatgttgtagatgccgctcataaggaatatcttaggccaatga |
22395443 |
T |
 |
| Q |
111 |
ggggatagattagatgtaagagagagaatctttgcaatttagggtatcttaatctatgacgggagggttgtct |
183 |
Q |
| |
|
||||||| ||| |||||||| | |||| |||||||| |||||||||||||||| ||||| ||||||||||||| |
|
|
| T |
22395444 |
ggggataaattggatgtaagggggagagtctttgcactttagggtatcttaatatatgatgggagggttgtct |
22395516 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 134 - 227
Target Start/End: Original strand, 19545153 - 19545241
Alignment:
| Q |
134 |
gagaatctttgcaatttagggtatcttaatctatgacgggagggttgtcttaaattttaatatgttgttactgttatgatgtgaattttgatga |
227 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||| |||||||||| ||||||||||||||| ||||||| |||||||||||||||| |
|
|
| T |
19545153 |
gagaatctttgcactttagggtatcttaatctatgatatgagggttgtc-----ttttaatatgttgttgctgttataatgtgaattttgatga |
19545241 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 127
Target Start/End: Original strand, 11796138 - 11796180
Alignment:
| Q |
85 |
tcttaaggagtatcttaggccaacgaggggatagattagatgt |
127 |
Q |
| |
|
||||||||||||||||| ||||||||||||| |||||| |||| |
|
|
| T |
11796138 |
tcttaaggagtatcttatgccaacgaggggaaagattaaatgt |
11796180 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 84 - 125
Target Start/End: Complemental strand, 34487950 - 34487909
Alignment:
| Q |
84 |
ctcttaaggagtatcttaggccaacgaggggatagattagat |
125 |
Q |
| |
|
||||||||| ||||| |||||||||||||||| ||||||||| |
|
|
| T |
34487950 |
ctcttaaggtgtatcataggccaacgaggggagagattagat |
34487909 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1043 (Bit Score: 141; Significance: 4e-74; HSPs: 1)
Name: scaffold1043
Description:
Target: scaffold1043; HSP #1
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 12 - 227
Target Start/End: Original strand, 402 - 618
Alignment:
| Q |
12 |
gagatgaataagcattgatgttattctttagatgacaagtagtgactgttccaacttattatgtagatgacactcttaaggagtatcttaggccaacgag |
111 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||| || ||||| ||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
402 |
gagatggataagcattgatgttattctttagatgacaagtagggatgattccagcttatgttgtagatgacactcttaaggagtatcttaggccaacgag |
501 |
T |
 |
| Q |
112 |
gggatagattagatgtaagagagagaatctttgcaatttagggtatcttaatctatgacgggagggttgtcttaaa-ttttaatatgttgttactgttat |
210 |
Q |
| |
|
||||||||||||||||||| | ||||||||||||||| ||| |||||||||||||||| | ||||||||||||||| |||||| |||||||||||||||| |
|
|
| T |
502 |
gggatagattagatgtaagggggagaatctttgcaatgtagagtatcttaatctatgatgagagggttgtcttaaatttttaaaatgttgttactgttat |
601 |
T |
 |
| Q |
211 |
gatgtgaattttgatga |
227 |
Q |
| |
|
||| |||||||| |||| |
|
|
| T |
602 |
gatatgaatttttatga |
618 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 137; Significance: 1e-71; HSPs: 6)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 11 - 227
Target Start/End: Complemental strand, 25792056 - 25791840
Alignment:
| Q |
11 |
tgagatgaataagcattgatgttattctttagatgacaagtagtgactgttccaacttattatgtagatgacactcttaaggagtatcttaggccaacga |
110 |
Q |
| |
|
|||||| ||||||||||||| |||||||||||||||||||||||| |||| | ||||| |||||||||| |||||||||||||||||||| |||||| |
|
|
| T |
25792056 |
tgagattaataagcattgattttattctttagatgacaagtagtggtggttcgagcttatactgtagatgacgctcttaaggagtatcttaggtcaacga |
25791957 |
T |
 |
| Q |
111 |
ggggatagattagatgtaagagagagaatctttgcaatttagggtatcttaatctatgacgggagggttgtcttaaattttaatatgttgttactgttat |
210 |
Q |
| |
|
||||| | |||||||||||||| ||||||||||| | ||||||||||||||||||||||| |||||||| ||||||||||||| |||||||||||||||| |
|
|
| T |
25791956 |
ggggacaaattagatgtaagagggagaatctttgaactttagggtatcttaatctatgacaggagggttttcttaaattttaaaatgttgttactgttat |
25791857 |
T |
 |
| Q |
211 |
gatgtgaattttgatga |
227 |
Q |
| |
|
|||||||| |||||||| |
|
|
| T |
25791856 |
gatgtgaactttgatga |
25791840 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 11 - 178
Target Start/End: Original strand, 25756188 - 25756355
Alignment:
| Q |
11 |
tgagatgaataagcattgatgttattctttagatgacaagtagtgactgttccaacttattatgtagatgacactcttaaggagtatcttaggccaacga |
110 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||||||||| |||| | ||||| |||||||||| |||||||||||||||||||| |||||| |
|
|
| T |
25756188 |
tgagatgaataagcattgattttattctttagatgacaagtagtggtggttcgagcttatactgtagatgacgctcttaaggagtatcttaggtcaacga |
25756287 |
T |
 |
| Q |
111 |
ggggatagattagatgtaagagagagaatctttgcaatttagggtatcttaatctatgacgggagggt |
178 |
Q |
| |
|
||||| | |||||||||||||| ||||||||||||| ||||||||||||||||||||||| ||||||| |
|
|
| T |
25756288 |
ggggacatattagatgtaagagggagaatctttgcactttagggtatcttaatctatgacaggagggt |
25756355 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 11 - 141
Target Start/End: Complemental strand, 19020386 - 19020257
Alignment:
| Q |
11 |
tgagatgaataagcattgatgttattctttagatgac-aagtagtgactgttccaacttattatgtagatgacactcttaaggagtatcttaggccaacg |
109 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||| ||||||||| |||||||||| ||| |||| | |||||||||||||||||||||||| | |
|
|
| T |
19020386 |
tgagatgaataagcattgatgttattatttagatgacaaagtagtgatggttccaacttgggttgttgatggcgctcttaaggagtatcttaggccaatg |
19020287 |
T |
 |
| Q |
110 |
aggggatagattagatgtaagagagagaatct |
141 |
Q |
| |
|
| ||| |||||||||||||| | |||||||| |
|
|
| T |
19020286 |
a--ggagagattagatgtaagggggagaatct |
19020257 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 134 - 214
Target Start/End: Complemental strand, 32948916 - 32948837
Alignment:
| Q |
134 |
gagaatctttgcaatttagggtatcttaatctatgacgggagggttgtcttaaattttaatatgttgttactgttatgatg |
214 |
Q |
| |
|
||||||||||||| ||||| |||||| ||||| ||| |||||||||||||| ||||||||||||||||| ||||||||||| |
|
|
| T |
32948916 |
gagaatctttgcactttagagtatctaaatct-tgatgggagggttgtctttaattttaatatgttgttgctgttatgatg |
32948837 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 148 - 227
Target Start/End: Complemental strand, 14138041 - 14137962
Alignment:
| Q |
148 |
tttagggtatcttaatctatgacgggagggttgtcttaaattttaatatgttgttactgttatgatgtgaattttgatga |
227 |
Q |
| |
|
|||||||||||||| | | ||| |||||||||||||||||| ||||||||||||| ||||||| ||||||||||||||| |
|
|
| T |
14138041 |
tttagggtatcttattatttgatgggagggttgtcttaaatcttaatatgttgttgttgttatgctgtgaattttgatga |
14137962 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 171 - 227
Target Start/End: Complemental strand, 23909235 - 23909179
Alignment:
| Q |
171 |
gggagggttgtcttaaattttaatatgttgttactgttatgatgtgaattttgatga |
227 |
Q |
| |
|
||||||||||||||||||||||||| |||||| |||||||||| |||||||||||| |
|
|
| T |
23909235 |
gggagggttgtcttaaattttaataagttgttgttgttatgatgagaattttgatga |
23909179 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 106; Significance: 3e-53; HSPs: 11)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 11 - 227
Target Start/End: Complemental strand, 17419705 - 17419493
Alignment:
| Q |
11 |
tgagatgaataagcattgatgttattctttagatgacaag-tagtgactgttccaacttattatgtagatgacactcttaaggagtatcttaggccaacg |
109 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||| |||||| |||||| |||| |||||||| ||||||||||||||||||||||||||| |
|
|
| T |
17419705 |
tgagatgaataagcattgatgttattctttatatgacaaggtagtgatggttccagtttatgttgtagatggtactcttaaggagtatcttaggccaacg |
17419606 |
T |
 |
| Q |
110 |
aggggatagattagatgtaagagagagaatctttgcaatttagggtatcttaatctatgacgggagggttgtcttaaattttaatatgttgttactgtta |
209 |
Q |
| |
|
|| |||||||| ||||| | |||||||||||| |||||||||||||||||||||| || || |||| ||||||||||| ||||||||||| ||| |
|
|
| T |
17419605 |
agtggatagat-----gtaaggggaagaatctttgcactttagggtatcttaatctatgaaggaagatttgttttaaattttaaaatgttgttactatta |
17419511 |
T |
 |
| Q |
210 |
tgatgtgaattttgatga |
227 |
Q |
| |
|
|||||||||||||||||| |
|
|
| T |
17419510 |
tgatgtgaattttgatga |
17419493 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 134 - 224
Target Start/End: Original strand, 19727541 - 19727631
Alignment:
| Q |
134 |
gagaatctttgcaatttagggtatcttaatctatgacgggagggttgtcttaaattttaatatgttgttactgttatgatgtgaattttga |
224 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
19727541 |
gagaatctttgcactttagggtatcttaatctatgacgggagggttgtcttaaattttaaaatgttgttactgttatgatgtgaattttga |
19727631 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 11 - 92
Target Start/End: Original strand, 19727457 - 19727538
Alignment:
| Q |
11 |
tgagatgaataagcattgatgttattctttagatgacaagtagtgactgttccaacttattatgtagatgacactcttaagg |
92 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
19727457 |
tgagatgaataagcattgatgttattctttagatgacaagtagtgactgttccaacttatgttgtagatgacactcttaagg |
19727538 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 137 - 227
Target Start/End: Complemental strand, 12230910 - 12230820
Alignment:
| Q |
137 |
aatctttgcaatttagggtatcttaatctatgacgggagggttgtcttaaattttaatatgttgttactgttatgatgtgaattttgatga |
227 |
Q |
| |
|
|||||||||| |||||||||||||||||||| | |||||||||||||||||||||||||||||||| || ||||||||||||||||||||| |
|
|
| T |
12230910 |
aatctttgcactttagggtatcttaatctattatgggagggttgtcttaaattttaatatgttgttgctattatgatgtgaattttgatga |
12230820 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 134 - 227
Target Start/End: Original strand, 13559374 - 13559467
Alignment:
| Q |
134 |
gagaatctttgcaatttagggtatcttaatctatgacgggagggttgtcttaaattttaatatgttgttactgttatgatgtgaattttgatga |
227 |
Q |
| |
|
||||||||||||| ||||| |||||||||||||||| ||||||||||||||||||||||||| |||||| |||||||||| ||| |||||||| |
|
|
| T |
13559374 |
gagaatctttgcactttagagtatcttaatctatgatgggagggttgtcttaaattttaataagttgttgatgttatgatgagaagtttgatga |
13559467 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 134 - 224
Target Start/End: Complemental strand, 13268124 - 13268034
Alignment:
| Q |
134 |
gagaatctttgcaatttagggtatcttaatctatgacgggagggttgtcttaaattttaatatgttgttactgttatgatgtgaattttga |
224 |
Q |
| |
|
||||||||||||| |||||||||||||||| ||||| ||||||||| ||||||||||||||| ||||| |||||||||||||||||||| |
|
|
| T |
13268124 |
gagaatctttgcactttagggtatcttaatttatgatgggagggttttcttaaattttaatacattgttgttgttatgatgtgaattttga |
13268034 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 134 - 227
Target Start/End: Original strand, 15870955 - 15871048
Alignment:
| Q |
134 |
gagaatctttgcaatttagggtatcttaatctatgacgggagggttgtcttaaattttaatatgttgttactgttatgatgtgaattttgatga |
227 |
Q |
| |
|
||||||||||||| |||||||||||||||| ||||| |||||||||||||||||||||||| | || |||||||||||| ||||||||||| |
|
|
| T |
15870955 |
gagaatctttgcactttagggtatcttaatttatgatgggagggttgtcttaaattttaatgcactttttctgttatgatgtaaattttgatga |
15871048 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 134 - 227
Target Start/End: Original strand, 18554729 - 18554817
Alignment:
| Q |
134 |
gagaatctttgcaatttagggtatcttaatctatgacgggagggttgtcttaaattttaatatgttgttactgttatgatgtgaattttgatga |
227 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||| |||||||||||| ||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
18554729 |
gagaatctttgcactttagggtatcttaatctatgatatgagggttgtctt-----ttaatatgttgttgctgttatgatgtgaattttgatga |
18554817 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 126 - 227
Target Start/End: Original strand, 15888522 - 15888623
Alignment:
| Q |
126 |
gtaagagagagaatctttgcaatttagggtatcttaatctatgacgggagggttgtcttaaattttaatatgttgttactgttatgatgtgaattttgat |
225 |
Q |
| |
|
||||||| ||||||||||||| |||||| ||||| ||| ||||| |||||||||||||||||||||||| | || |||||||||||| ||| ||||| |
|
|
| T |
15888522 |
gtaagagggagaatctttgcactttaggatatctaaatttatgatgggagggttgtcttaaattttaatgcacttttgctgttatgatgtaaatattgat |
15888621 |
T |
 |
| Q |
226 |
ga |
227 |
Q |
| |
|
|| |
|
|
| T |
15888622 |
ga |
15888623 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 136 - 224
Target Start/End: Complemental strand, 13235326 - 13235248
Alignment:
| Q |
136 |
gaatctttgcaatttagggtatcttaatctatgacgggagggttgtcttaaattttaatatgttgttactgttatgatgtgaattttga |
224 |
Q |
| |
|
||||||||||| |||||||||| ||||| |||||||| |||||| |||||||||||||| |||||||||||||||||||| |
|
|
| T |
13235326 |
gaatctttgcactttagggtatattaatttatgacggaagggtt----------ttaatatgttgttagtgttatgatgtgaattttga |
13235248 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 134 - 173
Target Start/End: Complemental strand, 9887026 - 9886987
Alignment:
| Q |
134 |
gagaatctttgcaatttagggtatcttaatctatgacggg |
173 |
Q |
| |
|
||||||||||||| |||||||||||||||| ||||||||| |
|
|
| T |
9887026 |
gagaatctttgcactttagggtatcttaatatatgacggg |
9886987 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0061 (Bit Score: 95; Significance: 1e-46; HSPs: 2)
Name: scaffold0061
Description:
Target: scaffold0061; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 11 - 141
Target Start/End: Original strand, 16550 - 16680
Alignment:
| Q |
11 |
tgagatgaataagcattgatgttattctttagatgacaagtagtgactgttccaacttattatgtagatgacactcttaaggagtatcttaggccaacga |
110 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||| |||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
16550 |
tgagatgaataagcattgatgttattctttagatgacaagtagtgattgttccagcttacgttgtagatgacgctcttaaggagtatcttaggccaacga |
16649 |
T |
 |
| Q |
111 |
ggggatagattagatgtaagagagagaatct |
141 |
Q |
| |
|
| |||||||||||||||||| | |||||||| |
|
|
| T |
16650 |
gtggatagattagatgtaagggggagaatct |
16680 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0061; HSP #2
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 11 - 141
Target Start/End: Original strand, 25608 - 25738
Alignment:
| Q |
11 |
tgagatgaataagcattgatgttattctttagatgacaagtagtgactgttccaacttattatgtagatgacactcttaaggagtatcttaggccaacga |
110 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||| |||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
25608 |
tgagatgaataagcattgatgttattctttagatgacaagtagtgattgttccagcttacgttgtagatgacgctcttaaggagtatcttaggccaacga |
25707 |
T |
 |
| Q |
111 |
ggggatagattagatgtaagagagagaatct |
141 |
Q |
| |
|
| |||||||||||||||||| | |||||||| |
|
|
| T |
25708 |
gtggatagattagatgtaagggggagaatct |
25738 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 66; Significance: 3e-29; HSPs: 4)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 134 - 227
Target Start/End: Original strand, 29718105 - 29718198
Alignment:
| Q |
134 |
gagaatctttgcaatttagggtatcttaatctatgacgggagggttgtcttaaattttaatatgttgttactgttatgatgtgaattttgatga |
227 |
Q |
| |
|
|||||| |||||| ||||| |||||||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
29718105 |
gagaatatttgcactttagagtatcttaatctatgatggaagggttgtcttaaattttaatatgttgttgttgttatgatgtgaattttgatga |
29718198 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 134 - 202
Target Start/End: Original strand, 18985282 - 18985350
Alignment:
| Q |
134 |
gagaatctttgcaatttagggtatcttaatctatgacgggagggttgtcttaaattttaatatgttgtt |
202 |
Q |
| |
|
||||||||||||| |||||||||| |||||||||| |||||||||| |||||||||||||||||||| |
|
|
| T |
18985282 |
gagaatctttgcacattagggtatcgtaatctatgataggagggttgtattaaattttaatatgttgtt |
18985350 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 134 - 221
Target Start/End: Original strand, 26861220 - 26861307
Alignment:
| Q |
134 |
gagaatctttgcaatttagggtatcttaatctatgacgggagggttgtcttaaattttaatatgttgttactgttatgatgtgaattt |
221 |
Q |
| |
|
|||| |||||||| ||||||||||||||||| |||| || |||||||| |||||||||||||| || || |||||||| ||| ||||| |
|
|
| T |
26861220 |
gagattctttgcactttagggtatcttaatccatgatggaagggttgtattaaattttaatatattattgctgttatggtgttaattt |
26861307 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 90
Target Start/End: Complemental strand, 22521805 - 22521725
Alignment:
| Q |
11 |
tgagatgaataagcattgatgttattctttagatgac-aagtagtgactgttccaacttattatgtagatgacactcttaa |
90 |
Q |
| |
|
|||||||||||| ||||||||||||| |||||||||| ||||||||| ||| |||||| | |||||||| | ||||||| |
|
|
| T |
22521805 |
tgagatgaataaccattgatgttattttttagatgacaaagtagtgatggttacaacttgtgttgtagatggcgctcttaa |
22521725 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 65; Significance: 1e-28; HSPs: 8)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 135 - 227
Target Start/End: Complemental strand, 21977209 - 21977117
Alignment:
| Q |
135 |
agaatctttgcaatttagggtatcttaatctatgacgggagggttgtcttaaattttaatatgttgttactgttatgatgtgaattttgatga |
227 |
Q |
| |
|
|||||||||||| |||||||||||||||| ||||| || |||||||||||||||||||||| ||||| |||||||||||||||||||||||| |
|
|
| T |
21977209 |
agaatctttgcactttagggtatcttaatttatgatggaagggttgtcttaaattttaatacattgttgctgttatgatgtgaattttgatga |
21977117 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 135 - 227
Target Start/End: Complemental strand, 21999640 - 21999548
Alignment:
| Q |
135 |
agaatctttgcaatttagggtatcttaatctatgacgggagggttgtcttaaattttaatatgttgttactgttatgatgtgaattttgatga |
227 |
Q |
| |
|
|||||||||||| |||||||||||||||| ||||| || |||||||||||||||||||||| ||||| |||||||||||||||||||||||| |
|
|
| T |
21999640 |
agaatctttgcactttagggtatcttaatttatgatggaagggttgtcttaaattttaatacattgttgctgttatgatgtgaattttgatga |
21999548 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 134 - 214
Target Start/End: Complemental strand, 10302824 - 10302744
Alignment:
| Q |
134 |
gagaatctttgcaatttagggtatcttaatctatgacgggagggttgtcttaaattttaatatgttgttactgttatgatg |
214 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||| |||||| |||||||||| |
|
|
| T |
10302824 |
gagaatctttgcactttagggtatcttaatctatgatgggagggttgtcttaaattttaataagttgttgatgttatgatg |
10302744 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 135 - 227
Target Start/End: Complemental strand, 22161835 - 22161743
Alignment:
| Q |
135 |
agaatctttgcaatttagggtatcttaatctatgacgggagggttgtcttaaattttaatatgttgttactgttatgatgtgaattttgatga |
227 |
Q |
| |
|
|||||||||||| |||||||||||||||| ||||| || ||||||||||||||||| |||| ||||| |||||||||||||||||||||||| |
|
|
| T |
22161835 |
agaatctttgcactttagggtatcttaatttatgatggaagggttgtcttaaatttgaatacattgttgctgttatgatgtgaattttgatga |
22161743 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 134 - 225
Target Start/End: Complemental strand, 19186887 - 19186796
Alignment:
| Q |
134 |
gagaatctttgcaatttagggtatcttaatctatgacgggagggttgtcttaaattttaatatgttgttactgttatgatgtgaattttgat |
225 |
Q |
| |
|
||||||||||||| |||||||||||||||| ||||| ||| |||| |||||||||||||||| ||||| |||||||||||||||||||||| |
|
|
| T |
19186887 |
gagaatctttgcactttagggtatcttaatttatgatgggtgggtcgtcttaaattttaatacattgttgctgttatgatgtgaattttgat |
19186796 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 134 - 227
Target Start/End: Complemental strand, 10341161 - 10341068
Alignment:
| Q |
134 |
gagaatctttgcaatttagggtatcttaatctatgacgggagggttgtcttaaattttaatatgttgttactgttatgatgtgaattttgatga |
227 |
Q |
| |
|
|||||| |||||| ||||||||||||||||||||| |||||| |||||||||||||||||| |||||| |||||||||| |||||||||||| |
|
|
| T |
10341161 |
gagaatatttgcactttagggtatcttaatctatggtgggaggattgtcttaaattttaataagttgttgatgttatgatgagaattttgatga |
10341068 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 134 - 227
Target Start/End: Original strand, 16357828 - 16357920
Alignment:
| Q |
134 |
gagaatctttgcaatttagggtatcttaatctatgacgggagggttgtcttaaattttaatatgttgttactgttatgatgtgaattttgatga |
227 |
Q |
| |
|
||||||||||||| |||||||||||||||| ||||| |||| ||||||||||||||||||| | || |||||||||||| ||| ||||||| |
|
|
| T |
16357828 |
gagaatctttgcactttagggtatcttaatttatgatggga-ggttgtcttaaattttaatgcacttttgctgttatgatgtaaatgttgatga |
16357920 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 126 - 221
Target Start/End: Complemental strand, 16928663 - 16928570
Alignment:
| Q |
126 |
gtaagagagagaatctttgcaatttagggtatcttaatctatgacggga-gggttgtcttaaattttaatatgttgttactgttatgatgtgaattt |
221 |
Q |
| |
|
||||| |||||||| ||| || |||| |||||||||||||||| || | ||||||||||||||||||||||||||| ||||||| ||||||||| |
|
|
| T |
16928663 |
gtaagggagagaatattttcactttaaagtatcttaatctatgatggaaagggttgtcttaaattttaatatgttgt---tgttatggtgtgaattt |
16928570 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0364 (Bit Score: 61; Significance: 2e-26; HSPs: 1)
Name: scaffold0364
Description:
Target: scaffold0364; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 134 - 214
Target Start/End: Complemental strand, 14668 - 14588
Alignment:
| Q |
134 |
gagaatctttgcaatttagggtatcttaatctatgacgggagggttgtcttaaattttaatatgttgttactgttatgatg |
214 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||| |||||||||||||| ||||| ||||||||||| ||||||||||| |
|
|
| T |
14668 |
gagaatctttgcactttagggtatcttaatctatgatgggagggttgtctttaatttcaatatgttgttgctgttatgatg |
14588 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0118 (Bit Score: 61; Significance: 2e-26; HSPs: 1)
Name: scaffold0118
Description:
Target: scaffold0118; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 135 - 227
Target Start/End: Complemental strand, 12060 - 11968
Alignment:
| Q |
135 |
agaatctttgcaatttagggtatcttaatctatgacgggagggttgtcttaaattttaatatgttgttactgttatgatgtgaattttgatga |
227 |
Q |
| |
|
||||| |||||| |||||||||||||||| ||||| |||||||||||||||||||||||| ||||| |||||||||||||||||||||||| |
|
|
| T |
12060 |
agaatatttgcactttagggtatcttaatttatgatgggagggttgtcttaaattttaattcattgttgctgttatgatgtgaattttgatga |
11968 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0385 (Bit Score: 58; Significance: 1e-24; HSPs: 1)
Name: scaffold0385
Description:
Target: scaffold0385; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 134 - 227
Target Start/End: Complemental strand, 16250 - 16157
Alignment:
| Q |
134 |
gagaatctttgcaatttagggtatcttaatctatgacgggagggttgtcttaaattttaatatgttgttactgttatgatgtgaattttgatga |
227 |
Q |
| |
|
||||||||||| | |||||||||||||||| ||||| |||||||| |||||||||||||||| ||||| || ||||||||||||||||||||| |
|
|
| T |
16250 |
gagaatctttgtactttagggtatcttaatttatgatgggagggtcgtcttaaattttaatacattgttgcttttatgatgtgaattttgatga |
16157 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0290 (Bit Score: 58; Significance: 1e-24; HSPs: 1)
Name: scaffold0290
Description:
Target: scaffold0290; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 134 - 227
Target Start/End: Original strand, 11843 - 11936
Alignment:
| Q |
134 |
gagaatctttgcaatttagggtatcttaatctatgacgggagggttgtcttaaattttaatatgttgttactgttatgatgtgaattttgatga |
227 |
Q |
| |
|
||||||||||||| |||||||| || |||| ||||| |||||||||| |||||||||||||||||||| |||||||||||| ||||||||||| |
|
|
| T |
11843 |
gagaatctttgcactttagggtgtcgtaatttatgataggagggttgtattaaattttaatatgttgttgctgttatgatgtaaattttgatga |
11936 |
T |
 |
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Target: chr8 (Bit Score: 57; Significance: 6e-24; HSPs: 4)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 135 - 227
Target Start/End: Original strand, 10454081 - 10454173
Alignment:
| Q |
135 |
agaatctttgcaatttagggtatcttaatctatgacgggagggttgtcttaaattttaatatgttgttactgttatgatgtgaattttgatga |
227 |
Q |
| |
|
|||||||||| | |||||||||||||||||||||| ||| |||||||| || ||||||||||||| || |||||||| ||||||||||||||| |
|
|
| T |
10454081 |
agaatctttgaactttagggtatcttaatctatgatgggtgggttgtcctatattttaatatgtttttgctgttatggtgtgaattttgatga |
10454173 |
T |
 |
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Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 180 - 227
Target Start/End: Original strand, 17861384 - 17861431
Alignment:
| Q |
180 |
gtcttaaattttaatatgttgttactgttatgatgtgaattttgatga |
227 |
Q |
| |
|
|||||||||||||| |||||||||||||||||| |||||||||||||| |
|
|
| T |
17861384 |
gtcttaaattttaaaatgttgttactgttatgacgtgaattttgatga |
17861431 |
T |
 |
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Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 134 - 227
Target Start/End: Complemental strand, 15727862 - 15727766
Alignment:
| Q |
134 |
gagaatctttgcaatttagggtatcttaatctatgacggga------gggttgtcttaaattttaatatgttgttactgttatgatgtgaattttgatga |
227 |
Q |
| |
|
||||||| || || |||||||||||||||||||||| |||| ||||||| ||| ||||||||||||||| |||||||||||||||||| |||| |
|
|
| T |
15727862 |
gagaatccttacactttagggtatcttaatctatgatgggattgagagggttgtattagattttaatatgttgt---tgttatgatgtgaatttttatga |
15727766 |
T |
 |
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Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 188 - 227
Target Start/End: Complemental strand, 1683281 - 1683242
Alignment:
| Q |
188 |
ttttaatatgttgttactgttatgatgtgaattttgatga |
227 |
Q |
| |
|
||||||||||||||| | |||||||||||||||||||||| |
|
|
| T |
1683281 |
ttttaatatgttgttgcggttatgatgtgaattttgatga |
1683242 |
T |
 |
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Target: scaffold0207 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0207
Description:
Target: scaffold0207; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 140 - 214
Target Start/End: Original strand, 752 - 827
Alignment:
| Q |
140 |
ctttgcaatttagggtatcttaatctatgacgggagggttgtcttaaattttaa-tatgttgttactgttatgatg |
214 |
Q |
| |
|
||||||| |||||||||||||||||||||| ||||||||||||| |||||||| ||||||||| ||||||||||| |
|
|
| T |
752 |
ctttgcactttagggtatcttaatctatgattggagggttgtctttaattttaattatgttgttgctgttatgatg |
827 |
T |
 |
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Target: chr1 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 134 - 219
Target Start/End: Complemental strand, 21496667 - 21496583
Alignment:
| Q |
134 |
gagaatctttgcaatttagggtatcttaatctatgacgggagggttgtcttaaattttaatatgttgttactgttatgatgtgaat |
219 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||| ||||||||| |||||||||| ||||||||||| || |||||| ||||| |
|
|
| T |
21496667 |
gagaatctttgcactttagggtatcttaatctatg-tgggagggttatcttaaatttaaatatgttgtttctaatatgatatgaat |
21496583 |
T |
 |
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Target: scaffold0094 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0094
Description:
Target: scaffold0094; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 134 - 224
Target Start/End: Original strand, 2509 - 2593
Alignment:
| Q |
134 |
gagaatctttgcaatttagggtatcttaatctatgacgggagggttgtcttaaattttaatatgttgttactgttatgatgtgaattttga |
224 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||| ||||||| | |||||||||||||||| ||| ||||||||||||||||| |
|
|
| T |
2509 |
gagaatctttgca-tttagggtatcttaatctatgatatgagggttat-----attttaatatgttgttgctggtatgatgtgaattttga |
2593 |
T |
 |
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Target: scaffold0381 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0381
Description:
Target: scaffold0381; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 134 - 173
Target Start/End: Original strand, 11518 - 11557
Alignment:
| Q |
134 |
gagaatctttgcaatttagggtatcttaatctatgacggg |
173 |
Q |
| |
|
||||||||||||| |||||||||||||||| ||||||||| |
|
|
| T |
11518 |
gagaatctttgcactttagggtatcttaatatatgacggg |
11557 |
T |
 |
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