View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16025_high_13 (Length: 223)

Name: NF16025_high_13
Description: NF16025
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16025_high_13
NF16025_high_13
[»] chr7 (41 HSPs)
chr7 (8-205)||(28066304-28066501)
chr7 (17-199)||(12082986-12083168)
chr7 (17-201)||(7414171-7414355)
chr7 (42-198)||(150144-150300)
chr7 (42-194)||(11824753-11824905)
chr7 (17-153)||(31267178-31267313)
chr7 (42-200)||(3380669-3380827)
chr7 (8-200)||(27317781-27317980)
chr7 (42-176)||(18149606-18149739)
chr7 (42-150)||(1642582-1642690)
chr7 (43-150)||(41048887-41048994)
chr7 (43-150)||(48270752-48270859)
chr7 (8-106)||(12309566-12309664)
chr7 (8-108)||(7066803-7066903)
chr7 (43-150)||(21187295-21187402)
chr7 (43-150)||(30354811-30354918)
chr7 (43-150)||(48315176-48315283)
chr7 (42-150)||(21614755-21614863)
chr7 (46-150)||(34140969-34141073)
chr7 (43-150)||(15337901-15338008)
chr7 (43-150)||(36393820-36393927)
chr7 (43-150)||(46862190-46862297)
chr7 (46-150)||(2206036-2206140)
chr7 (58-150)||(17183316-17183408)
chr7 (46-150)||(18237668-18237772)
chr7 (61-141)||(21650637-21650717)
chr7 (43-150)||(42735366-42735473)
chr7 (43-150)||(43351096-43351202)
chr7 (66-143)||(28114412-28114489)
chr7 (42-150)||(2356393-2356501)
chr7 (46-150)||(9367119-9367223)
chr7 (46-150)||(20564863-20564967)
chr7 (46-150)||(41217718-41217822)
chr7 (46-107)||(30360663-30360724)
chr7 (46-110)||(26601777-26601841)
chr7 (46-150)||(39477239-39477343)
chr7 (46-150)||(40588653-40588757)
chr7 (59-177)||(13304260-13304378)
chr7 (11-49)||(16886467-16886505)
chr7 (61-150)||(17839427-17839516)
chr7 (32-101)||(26926654-26926723)
[»] scaffold0121 (1 HSPs)
scaffold0121 (19-199)||(5404-5584)
[»] chr1 (52 HSPs)
chr1 (8-195)||(19262375-19262562)
chr1 (57-200)||(48706920-48707063)
chr1 (57-189)||(15471590-15471722)
chr1 (42-200)||(14772528-14772686)
chr1 (43-150)||(17697148-17697255)
chr1 (43-150)||(36909663-36909770)
chr1 (43-150)||(49926377-49926484)
chr1 (8-109)||(21760350-21760451)
chr1 (42-150)||(3658575-3658683)
chr1 (43-150)||(6435874-6435981)
chr1 (43-150)||(14173755-14173862)
chr1 (46-150)||(35576441-35576545)
chr1 (43-150)||(17686358-17686465)
chr1 (43-150)||(37778181-37778288)
chr1 (43-150)||(49396806-49396913)
chr1 (42-143)||(21484639-21484740)
chr1 (58-143)||(24270375-24270460)
chr1 (46-150)||(35586929-35587033)
chr1 (46-150)||(39856906-39857010)
chr1 (46-150)||(49427489-49427593)
chr1 (46-153)||(12791273-12791380)
chr1 (43-150)||(38046431-38046538)
chr1 (42-150)||(5765308-5765416)
chr1 (42-126)||(13283831-13283915)
chr1 (46-150)||(13635297-13635401)
chr1 (42-150)||(18842541-18842649)
chr1 (46-150)||(50068259-50068363)
chr1 (43-150)||(13973026-13973133)
chr1 (66-189)||(27799729-27799852)
chr1 (47-150)||(42571777-42571880)
chr1 (43-136)||(40533283-40533376)
chr1 (43-127)||(16532087-16532171)
chr1 (46-150)||(27486690-27486794)
chr1 (44-136)||(35185087-35185179)
chr1 (46-150)||(45689221-45689325)
chr1 (119-170)||(12026624-12026675)
chr1 (43-150)||(18170127-18170234)
chr1 (43-126)||(23342767-23342850)
chr1 (58-143)||(48215307-48215392)
chr1 (8-109)||(11789108-11789213)
chr1 (58-126)||(35526189-35526257)
chr1 (46-150)||(39224197-39224301)
chr1 (46-142)||(44337319-44337415)
chr1 (46-150)||(44597803-44597907)
chr1 (46-150)||(46180280-46180384)
chr1 (58-150)||(48568416-48568508)
chr1 (46-150)||(51269904-51270008)
chr1 (43-150)||(17372829-17372936)
chr1 (52-127)||(29707547-29707622)
chr1 (42-92)||(24363796-24363846)
chr1 (58-150)||(19160419-19160511)
chr1 (61-105)||(26793463-26793507)
[»] chr5 (43 HSPs)
chr5 (17-197)||(15798053-15798233)
chr5 (42-194)||(25360581-25360734)
chr5 (8-196)||(19748123-19748310)
chr5 (42-196)||(18920789-18920943)
chr5 (42-200)||(36311943-36312101)
chr5 (8-200)||(23228634-23228823)
chr5 (42-197)||(17195357-17195511)
chr5 (46-200)||(13131080-13131231)
chr5 (43-150)||(4724073-4724180)
chr5 (118-189)||(12067657-12067728)
chr5 (42-150)||(33370755-33370863)
chr5 (43-142)||(36350313-36350412)
chr5 (8-106)||(10975955-10976053)
chr5 (8-101)||(28718216-28718309)
chr5 (66-199)||(37396765-37396898)
chr5 (43-150)||(1400301-1400408)
chr5 (20-108)||(21293971-21294057)
chr5 (46-150)||(8538055-8538159)
chr5 (29-171)||(16418085-16418227)
chr5 (44-150)||(35565372-35565478)
chr5 (46-150)||(7231-7335)
chr5 (58-150)||(8576155-8576247)
chr5 (46-150)||(11346810-11346914)
chr5 (46-150)||(19036676-19036780)
chr5 (43-150)||(1694890-1694997)
chr5 (60-150)||(18308361-18308451)
chr5 (46-143)||(3601449-3601546)
chr5 (58-150)||(1971466-1971558)
chr5 (58-150)||(27661391-27661483)
chr5 (46-150)||(28881092-28881196)
chr5 (42-105)||(12742818-12742881)
chr5 (17-64)||(22858268-22858315)
chr5 (77-150)||(2599320-2599393)
chr5 (46-150)||(11027878-11027982)
chr5 (46-150)||(19400464-19400568)
chr5 (46-150)||(30709699-30709803)
chr5 (58-150)||(38854259-38854351)
chr5 (43-106)||(6793385-6793448)
chr5 (17-92)||(31488142-31488217)
chr5 (46-136)||(7082336-7082426)
chr5 (46-150)||(541637-541741)
chr5 (46-150)||(17366738-17366842)
chr5 (46-150)||(40009629-40009733)
[»] chr2 (42 HSPs)
chr2 (42-197)||(27650419-27650574)
chr2 (42-200)||(31991928-31992086)
chr2 (16-196)||(11679054-11679235)
chr2 (57-189)||(26617484-26617616)
chr2 (27-199)||(11718811-11718984)
chr2 (27-200)||(18878569-18878733)
chr2 (42-200)||(15891639-15891797)
chr2 (42-199)||(18036154-18036308)
chr2 (43-150)||(35491741-35491848)
chr2 (8-108)||(28746922-28747022)
chr2 (43-150)||(27130502-27130609)
chr2 (43-150)||(37312488-37312595)
chr2 (43-150)||(41499087-41499194)
chr2 (43-150)||(6976942-6977049)
chr2 (8-106)||(20988663-20988761)
chr2 (42-143)||(20148231-20148332)
chr2 (42-150)||(10364629-10364737)
chr2 (42-150)||(33404121-33404229)
chr2 (46-150)||(42120118-42120222)
chr2 (43-150)||(19471627-19471734)
chr2 (42-150)||(6902072-6902180)
chr2 (46-150)||(29067835-29067939)
chr2 (43-143)||(40677368-40677468)
chr2 (43-150)||(2919358-2919465)
chr2 (43-150)||(34521677-34521784)
chr2 (43-106)||(43491600-43491663)
chr2 (46-143)||(5420582-5420679)
chr2 (46-150)||(3937060-3937164)
chr2 (46-150)||(10360195-10360299)
chr2 (46-150)||(12968298-12968402)
chr2 (46-150)||(17424895-17424999)
chr2 (58-150)||(29111264-29111356)
chr2 (46-150)||(43982962-43983066)
chr2 (42-108)||(16253603-16253669)
chr2 (130-183)||(20529818-20529872)
chr2 (46-150)||(3941843-3941947)
chr2 (42-126)||(17796099-17796183)
chr2 (8-108)||(18332704-18332804)
chr2 (58-150)||(22001940-22002032)
chr2 (46-150)||(42241095-42241199)
chr2 (58-150)||(29906688-29906780)
chr2 (46-150)||(39393997-39394101)
[»] chr6 (34 HSPs)
chr6 (8-180)||(18743938-18744110)
chr6 (19-200)||(2402256-2402432)
chr6 (42-200)||(17465330-17465488)
chr6 (42-200)||(28051423-28051582)
chr6 (133-200)||(14482898-14482965)
chr6 (77-199)||(20192376-20192497)
chr6 (77-199)||(20242157-20242278)
chr6 (77-199)||(22136141-22136262)
chr6 (77-199)||(22143494-22143615)
chr6 (20-105)||(5973004-5973089)
chr6 (46-150)||(801271-801375)
chr6 (43-150)||(13402639-13402746)
chr6 (43-150)||(32027624-32027731)
chr6 (43-150)||(32037683-32037790)
chr6 (8-106)||(3097475-3097573)
chr6 (17-107)||(14095785-14095875)
chr6 (138-195)||(33719130-33719187)
chr6 (43-150)||(30257575-30257682)
chr6 (20-105)||(8711033-8711118)
chr6 (46-150)||(11692557-11692661)
chr6 (42-119)||(34134788-34134865)
chr6 (46-150)||(6205590-6205694)
chr6 (46-150)||(27640286-27640390)
chr6 (46-150)||(29108246-29108350)
chr6 (43-143)||(34802892-34802992)
chr6 (43-150)||(12396882-12396989)
chr6 (42-143)||(14115150-14115251)
chr6 (145-205)||(34132642-34132702)
chr6 (8-49)||(24560018-24560059)
chr6 (47-92)||(35021237-35021282)
chr6 (28-92)||(21864877-21864941)
chr6 (46-150)||(29066659-29066763)
chr6 (46-150)||(29075672-29075776)
chr6 (46-150)||(29110644-29110748)
[»] chr4 (56 HSPs)
chr4 (8-200)||(20759098-20759290)
chr4 (8-200)||(20765489-20765681)
chr4 (42-196)||(23124522-23124676)
chr4 (42-200)||(17292014-17292172)
chr4 (42-150)||(13866365-13866473)
chr4 (43-153)||(34529794-34529904)
chr4 (42-150)||(13850851-13850959)
chr4 (46-150)||(14330695-14330799)
chr4 (42-150)||(3393406-3393514)
chr4 (42-150)||(17211368-17211476)
chr4 (42-150)||(20778866-20778974)
chr4 (43-150)||(22437013-22437120)
chr4 (43-150)||(47657353-47657460)
chr4 (42-148)||(24606856-24606962)
chr4 (42-143)||(31324283-31324384)
chr4 (46-150)||(1226261-1226365)
chr4 (43-150)||(43889497-43889604)
chr4 (43-143)||(957453-957553)
chr4 (42-150)||(18412697-18412805)
chr4 (46-150)||(33163545-33163649)
chr4 (43-150)||(4785420-4785527)
chr4 (43-150)||(21169553-21169660)
chr4 (43-150)||(49817642-49817749)
chr4 (46-143)||(49064088-49064185)
chr4 (46-150)||(242417-242521)
chr4 (46-150)||(6282324-6282428)
chr4 (46-150)||(21017178-21017282)
chr4 (46-150)||(27759429-27759533)
chr4 (58-150)||(40353786-40353878)
chr4 (46-150)||(41794563-41794667)
chr4 (46-150)||(49094847-49094951)
chr4 (43-150)||(26591683-26591790)
chr4 (46-143)||(32937903-32938000)
chr4 (66-179)||(44100564-44100677)
chr4 (46-150)||(1042851-1042955)
chr4 (46-150)||(6177316-6177420)
chr4 (46-150)||(21711632-21711736)
chr4 (46-150)||(25762700-25762804)
chr4 (46-150)||(51428193-51428297)
chr4 (46-150)||(55796845-55796949)
chr4 (46-150)||(56139012-56139116)
chr4 (17-108)||(31931717-31931808)
chr4 (47-150)||(34153288-34153391)
chr4 (43-150)||(49791934-49792041)
chr4 (46-143)||(37866516-37866613)
chr4 (43-108)||(42886410-42886475)
chr4 (46-150)||(46816526-46816628)
chr4 (42-150)||(10312374-10312482)
chr4 (42-150)||(11288397-11288504)
chr4 (42-126)||(49817194-49817278)
chr4 (83-150)||(45939627-45939694)
chr4 (43-126)||(49423756-49423839)
chr4 (63-149)||(36776537-36776623)
chr4 (46-150)||(31824630-31824734)
chr4 (46-150)||(39589031-39589135)
chr4 (46-150)||(51027768-51027872)
[»] scaffold0027 (1 HSPs)
scaffold0027 (57-189)||(36729-36861)
[»] chr3 (66 HSPs)
chr3 (57-179)||(17267305-17267427)
chr3 (42-138)||(18440873-18440969)
chr3 (42-138)||(19485947-19486043)
chr3 (43-150)||(55206880-55206987)
chr3 (43-150)||(34472072-34472179)
chr3 (43-150)||(45100461-45100568)
chr3 (43-150)||(51015393-51015500)
chr3 (43-149)||(36721385-36721491)
chr3 (46-150)||(34693289-34693393)
chr3 (46-150)||(44927579-44927683)
chr3 (46-150)||(53826695-53826799)
chr3 (47-150)||(6464345-6464448)
chr3 (43-150)||(41804018-41804125)
chr3 (43-150)||(46414330-46414437)
chr3 (58-143)||(46346623-46346708)
chr3 (46-150)||(24702271-24702375)
chr3 (42-150)||(27187064-27187172)
chr3 (43-150)||(2428603-2428710)
chr3 (43-126)||(30192678-30192761)
chr3 (43-150)||(37281568-37281675)
chr3 (43-150)||(41578022-41578129)
chr3 (43-150)||(51013274-51013381)
chr3 (44-150)||(52569406-52569512)
chr3 (58-143)||(19453240-19453325)
chr3 (46-150)||(13895869-13895973)
chr3 (42-150)||(14265521-14265629)
chr3 (8-108)||(17370952-17371052)
chr3 (43-143)||(34647263-34647363)
chr3 (46-150)||(39416947-39417051)
chr3 (46-150)||(49218735-49218839)
chr3 (46-150)||(50997504-50997608)
chr3 (43-138)||(7246222-7246317)
chr3 (47-150)||(25887611-25887713)
chr3 (43-150)||(50458687-50458794)
chr3 (17-92)||(55390749-55390824)
chr3 (42-136)||(774333-774427)
chr3 (43-153)||(8633355-8633465)
chr3 (43-137)||(10053271-10053364)
chr3 (52-150)||(43570026-43570124)
chr3 (43-108)||(47759887-47759952)
chr3 (46-150)||(2268493-2268597)
chr3 (46-150)||(2646875-2646979)
chr3 (46-150)||(4004086-4004190)
chr3 (46-150)||(34049843-34049947)
chr3 (46-150)||(42382387-42382491)
chr3 (46-150)||(42383167-42383271)
chr3 (46-150)||(42950019-42950123)
chr3 (46-150)||(46403119-46403223)
chr3 (46-150)||(49140053-49140157)
chr3 (46-150)||(54390558-54390662)
chr3 (43-150)||(7954320-7954427)
chr3 (43-150)||(14631561-14631668)
chr3 (47-150)||(25576592-25576694)
chr3 (43-126)||(42323385-42323468)
chr3 (47-150)||(48087552-48087655)
chr3 (44-143)||(49273522-49273621)
chr3 (129-179)||(20409848-20409898)
chr3 (42-104)||(33449146-33449208)
chr3 (46-150)||(3495028-3495132)
chr3 (42-150)||(6754320-6754428)
chr3 (46-150)||(47065803-47065907)
chr3 (58-150)||(51695617-51695709)
chr3 (69-107)||(29634931-29634969)
chr3 (8-105)||(1638569-1638666)
chr3 (58-106)||(36135167-36135215)
chr3 (46-150)||(49610605-49610709)
[»] chr8 (30 HSPs)
chr8 (8-182)||(26140223-26140398)
chr8 (8-106)||(24629888-24629986)
chr8 (43-150)||(41856969-41857076)
chr8 (43-150)||(44943076-44943183)
chr8 (43-143)||(31171811-31171911)
chr8 (42-150)||(3589260-3589368)
chr8 (8-108)||(10204720-10204819)
chr8 (46-150)||(15032322-15032426)
chr8 (129-182)||(12785267-12785320)
chr8 (8-108)||(27783594-27783694)
chr8 (46-143)||(41275513-41275610)
chr8 (43-143)||(18440290-18440390)
chr8 (66-186)||(32108919-32109039)
chr8 (46-150)||(42168958-42169062)
chr8 (61-136)||(12504755-12504830)
chr8 (46-150)||(26452437-26452541)
chr8 (46-150)||(33799549-33799653)
chr8 (46-150)||(38033923-38034027)
chr8 (46-150)||(41363768-41363872)
chr8 (46-150)||(43693249-43693353)
chr8 (43-150)||(42603566-42603673)
chr8 (46-150)||(40415369-40415473)
chr8 (46-150)||(43638675-43638779)
chr8 (66-140)||(19242180-19242254)
chr8 (66-140)||(19315364-19315438)
chr8 (131-189)||(22843397-22843455)
chr8 (61-138)||(40702484-40702561)
chr8 (46-106)||(485256-485316)
chr8 (58-150)||(28706152-28706244)
chr8 (46-150)||(40414722-40414826)
[»] scaffold0176 (1 HSPs)
scaffold0176 (46-150)||(1894-1998)
[»] scaffold0192 (1 HSPs)
scaffold0192 (46-150)||(17916-18020)
[»] scaffold0004 (1 HSPs)
scaffold0004 (42-105)||(64098-64161)
[»] scaffold0589 (1 HSPs)
scaffold0589 (46-150)||(2371-2475)
[»] scaffold0294 (1 HSPs)
scaffold0294 (66-103)||(1176-1213)


Alignment Details
Target: chr7 (Bit Score: 170; Significance: 2e-91; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 8 - 205
Target Start/End: Complemental strand, 28066501 - 28066304
Alignment:
Q  8 tccaagaatataaagacactacataataatgatgctacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacg 107  Q
    ||||| || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28066501 tccaacaaaataaagacactacataataatgatgttacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacg 28066402  T
Q  108 tgacaaacatatcgatccataggaacatgttgtgctgccaaaaaatcgagaacatgctcctcacatcgtcgtcgttctttaattctagccgacgaaac 205  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||    
T  28066401 tgacaaacatatcgatccacaggaacatgttgtgctgccaaaaaatcgagaacatgctcctcgcgtcgtcgtcgttctttaattctagccgatgaaac 28066304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 17 - 199
Target Start/End: Complemental strand, 12083168 - 12082986
Alignment:
Q  17 ataaagacactacataataatgatgctacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaaca 116  Q
    ||||||||||||||||||||||||||||||||||||  || ||| ||||||| |||||| |||||||||||||||| |||||||||||| ||||||||||    
T  12083168 ataaagacactacataataatgatgctacctaatcataatcttcaggcggaaccaaactgttgagaatatcttcaggcgatctcagcaatgtgacaaaca 12083069  T
Q  117 tatcgatccataggaacatgttgtgctgccaaaaaatcgagaacatgctcctcacatcgtcgtcgttctttaattctagccga 199  Q
    |||| |||||| ||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  12083068 tatccatccatgggaacatgttgtgctgctaaaaaatcgagaacatgctcctcacatcatcgtcgttctttaattctagccga 12082986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 17 - 201
Target Start/End: Original strand, 7414171 - 7414355
Alignment:
Q  17 ataaagacactacataataatgatgctacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaaca 116  Q
    ||||||||||||||||||||||||||||||||||||  || |||||||| ||||||||| |||||||||| ||||| |||||||||||||||||||||||    
T  7414171 ataaagacactacataataatgatgctacctaatcataatcttctggcgaaatcaaactgttgagaatattttcaggcgatctcagcaacgtgacaaaca 7414270  T
Q  117 tatcgatccataggaacatgttgtgctgccaaaaaatcgagaacatgctcctcacatcgtcgtcgttctttaattctagccgacg 201  Q
    ||| ||||||   |||||||||||||||||||||||| ||||||||||||||||| |||||||||||| ||||||||||| ||||    
T  7414271 tatagatccacgagaacatgttgtgctgccaaaaaattgagaacatgctcctcacgtcgtcgtcgttcgttaattctagctgacg 7414355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 42 - 198
Target Start/End: Complemental strand, 150300 - 150144
Alignment:
Q  42 ctacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtg 141  Q
    ||||||||||||||| |||| || |||||||| | |||||||||||||||| |||||||| |||||||||||| |||||||||||  |||||||| ||||    
T  150300 ctacctaatcacgatcttctagcagaatcaaattgttgagaatatcttcaggcgatctcaacaacgtgacaaatatatcgatccacgggaacatgatgtg 150201  T
Q  142 ctgccaaaaaatcgagaacatgctcctcacatcgtcgtcgttctttaattctagccg 198  Q
    ||||||||||||||||||||||||||| || ||||||||||||||||||||||||||    
T  150200 ctgccaaaaaatcgagaacatgctccttacgtcgtcgtcgttctttaattctagccg 150144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 42 - 194
Target Start/End: Complemental strand, 11824905 - 11824753
Alignment:
Q  42 ctacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtg 141  Q
    ||||||||||||||| |||| ||||||||||||| |||| |||||||||||  |||||| ||||||||||| ||||||||||  | |  | |||||||||    
T  11824905 ctacctaatcacgatcttctagcggaatcaaactgttgaaaatatcttcagttgatctctgcaacgtgacatacatatcgataaacataaccatgttgtg 11824806  T
Q  142 ctgccaaaaaatcgagaacatgctcctcacatcgtcgtcgttctttaattcta 194  Q
     |||||||| |||||||||||||||||||| ||||||||||||||||||||||    
T  11824805 ttgccaaaatatcgagaacatgctcctcacgtcgtcgtcgttctttaattcta 11824753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 17 - 153
Target Start/End: Complemental strand, 31267313 - 31267178
Alignment:
Q  17 ataaagacactacataataatgatgctacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaaca 116  Q
    |||||||||||||||||||||||||| |||||||||  || |||| || |||||||||| || ||||||||||||| |||||| ||||||||||||||||    
T  31267313 ataaagacactacataataatgatgccacctaatcataatcttctagctgaatcaaactgtt-agaatatcttcaggcgatcttagcaacgtgacaaaca 31267215  T
Q  117 tatcgatccataggaacatgttgtgctgccaaaaaat 153  Q
    ||||||||||  |||||||||||||||| ||||||||    
T  31267214 tatcgatccacgggaacatgttgtgctgacaaaaaat 31267178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 42 - 200
Target Start/End: Original strand, 3380669 - 3380827
Alignment:
Q  42 ctacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtg 141  Q
    ||||||||||||||| ||||||| |||||||| | ||||||||||||||||  ||||||  ||| |||| ||||||||||||  |    | |||||||||    
T  3380669 ctacctaatcacgatcttctggcagaatcaaattgttgagaatatcttcagttgatctctacaatgtgataaacatatcgataaacgaaaccatgttgtg 3380768  T
Q  142 ctgccaaaaaatcgagaacatgctcctcacatcgtcgtcgttctttaattctagccgac 200  Q
     ||||||||||| ||||||||| ||||||| ||||||||||||||||||||||||||||    
T  3380769 ttgccaaaaaattgagaacatgttcctcacgtcgtcgtcgttctttaattctagccgac 3380827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 8 - 200
Target Start/End: Original strand, 27317781 - 27317980
Alignment:
Q  8 tccaagaatataaagacactacataataatgatgctacctaatcacgatgttctgg------cggaatcaaacttttgagaatatcttcagacgatctca 101  Q
    ||||| || ||||||||||||||||||||||||||||||||| ||  || ||||||      | |||||||||| ||||||| |||||| | ||||||||    
T  27317781 tccaacaaaataaagacactacataataatgatgctacctaaacataatcttctggtttcggcagaatcaaactattgagaagatcttccggcgatctca 27317880  T
Q  102 gcaacgtgacaaacatatcgatccataggaacatgttgtgctg-ccaaaaaatcgagaacatgctcctcacatcgtcgtcgttctttaattctagccgac 200  Q
    ||||||||||||||||||| ||||||   || ||||||   ||   ||||||||||||||||  ||||||| |||||||||||| |||||||||||||||    
T  27317881 gcaacgtgacaaacatatcaatccatgcaaaaatgttgcattgataaaaaaatcgagaacatattcctcacgtcgtcgtcgttcgttaattctagccgac 27317980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 42 - 176
Target Start/End: Complemental strand, 18149739 - 18149606
Alignment:
Q  42 ctacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtg 141  Q
    ||||||||  ||||| |||||||| ||||||||| ||||||||||||||||  |||||| ||||| ||| ||||| |||||||||  |||||||||||||    
T  18149739 ctacctaaatacgatcttctggcgcaatcaaactgttgagaatatcttcagttgatctctgcaacttgaaaaacaaatcgatccacgggaacatgttgtg 18149640  T
Q  142 ctgccaaaaaatcgagaacatgctcctcacatcgt 176  Q
    ||| | |||||||||||||| ||| ||||| ||||    
T  18149639 ctg-ctaaaaatcgagaacaagcttctcacgtcgt 18149606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 42 - 150
Target Start/End: Original strand, 1642582 - 1642690
Alignment:
Q  42 ctacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtg 141  Q
    ||||||||||||||| |||||||||||||||||| |||| |||||||||||  ||||||| |||||| |||  ||||||||||||   ||||||||||||    
T  1642582 ctacctaatcacgatcttctggcggaatcaaactgttgataatatcttcagttgatctcaacaacgttacacgcatatcgatccacttgaacatgttgtg 1642681  T
Q  142 ctgccaaaa 150  Q
    || ||||||    
T  1642682 ctcccaaaa 1642690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 43 - 150
Target Start/End: Complemental strand, 41048994 - 41048887
Alignment:
Q  43 tacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgc 142  Q
    |||||||| ||||| |||||||||||||||||||||||  ||||||||||  |||||||||||||| ||   ||||||||||||  ||||||||||||||    
T  41048994 tacctaatgacgatcttctggcggaatcaaacttttgatgatatcttcagttgatctcagcaacgtcacccgcatatcgatccactggaacatgttgtgc 41048895  T
Q  143 tgccaaaa 150  Q
    | ||||||    
T  41048894 tcccaaaa 41048887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 43 - 150
Target Start/End: Complemental strand, 48270859 - 48270752
Alignment:
Q  43 tacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgc 142  Q
    |||||||  ||||| |||||||||||||||||||||||  ||||||||||  |||||||||||||| ||   ||||||||||||  ||||||||||||||    
T  48270859 tacctaacgacgatcttctggcggaatcaaacttttgatgatatcttcagttgatctcagcaacgtcacccgcatatcgatccactggaacatgttgtgc 48270760  T
Q  143 tgccaaaa 150  Q
    | ||||||    
T  48270759 tcccaaaa 48270752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 8 - 106
Target Start/End: Original strand, 12309566 - 12309664
Alignment:
Q  8 tccaagaatataaagacactacataataatgatgctacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaac 106  Q
    ||||| || ||||||||| ||||||||||||||||||||||| ||  || || |||| |||||||||| |||||||||||||||  |||||||||||||    
T  12309566 tccaacaaaataaagacaatacataataatgatgctacctaaacataatcttgtggcagaatcaaactcttgagaatatcttcatgcgatctcagcaac 12309664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 8 - 108
Target Start/End: Complemental strand, 7066903 - 7066803
Alignment:
Q  8 tccaagaatataaagacactacataataatgatgctacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacg 107  Q
    ||||| || ||||||||||||||||||||||||||||||||| ||  || || |||| ||||||| || || ||||||| ||||| ||||||||||||||    
T  7066903 tccaacaaaataaagacactacataataatgatgctacctaaacataatcttgtggcagaatcaagctcttaagaatatattcaggcgatctcagcaacg 7066804  T
Q  108 t 108  Q
    |    
T  7066803 t 7066803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 43 - 150
Target Start/End: Original strand, 21187295 - 21187402
Alignment:
Q  43 tacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgc 142  Q
    |||||||| ||||| ||||| |||||||||||||||||  ||||||||||  |||||||||||||| ||   ||||||||||||   |||||||||||||    
T  21187295 tacctaatgacgatcttctgacggaatcaaacttttgatgatatcttcagttgatctcagcaacgtcacccgcatatcgatccactagaacatgttgtgc 21187394  T
Q  143 tgccaaaa 150  Q
    | ||||||    
T  21187395 tcccaaaa 21187402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 43 - 150
Target Start/End: Original strand, 30354811 - 30354918
Alignment:
Q  43 tacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgc 142  Q
    |||||||| ||||| || |||| |||||||||||||||  ||||||||||  |||||||||||||| |   |||||||||||||  ||||||||||||||    
T  30354811 tacctaatgacgatcttttggcagaatcaaacttttgatgatatcttcagctgatctcagcaacgtcatccacatatcgatccactggaacatgttgtgc 30354910  T
Q  143 tgccaaaa 150  Q
    | ||||||    
T  30354911 tcccaaaa 30354918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 43 - 150
Target Start/End: Original strand, 48315176 - 48315283
Alignment:
Q  43 tacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgc 142  Q
    |||||||| ||||| || ||||||||||||||||||||  ||||||||||  |||||||||||||| ||   |||||||||| |  ||||||||||||||    
T  48315176 tacctaatgacgatcttatggcggaatcaaacttttgatgatatcttcagttgatctcagcaacgtcacccgcatatcgatctactggaacatgttgtgc 48315275  T
Q  143 tgccaaaa 150  Q
    | ||||||    
T  48315276 tcccaaaa 48315283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 42 - 150
Target Start/End: Original strand, 21614755 - 21614863
Alignment:
Q  42 ctacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtg 141  Q
    ||||||||||||||  |||||||||||||||| ||||||  ||||||||||  |||||||||||||| ||   ||||||||||||   ||||||| ||||    
T  21614755 ctacctaatcacgaacttctggcggaatcaaaattttgatgatatcttcagttgatctcagcaacgttacccgcatatcgatccactagaacatgatgtg 21614854  T
Q  142 ctgccaaaa 150  Q
    || ||||||    
T  21614855 ctcccaaaa 21614863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 46 - 150
Target Start/End: Complemental strand, 34141073 - 34140969
Alignment:
Q  46 ctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgctgc 145  Q
    ||||| ||||| || ||||| ||||||||||||||  ||||||||||  |||||||||||||| ||   ||||||||||||  ||||||||||||||| |    
T  34141073 ctaatgacgatcttatggcgaaatcaaacttttgatgatatcttcagttgatctcagcaacgtcacccgcatatcgatccactggaacatgttgtgctcc 34140974  T
Q  146 caaaa 150  Q
    |||||    
T  34140973 caaaa 34140969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 43 - 150
Target Start/End: Original strand, 15337901 - 15338008
Alignment:
Q  43 tacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgc 142  Q
    |||||||| ||||| |||||||||||||| ||| || | |||||||||||  |||||||||||||| ||   ||||||||||||  | ||||||||||||    
T  15337901 tacctaatgacgatcttctggcggaatcagactgtttataatatcttcagttgatctcagcaacgttacccgcatatcgatccactgaaacatgttgtgc 15338000  T
Q  143 tgccaaaa 150  Q
    | ||||||    
T  15338001 tcccaaaa 15338008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 43 - 150
Target Start/End: Original strand, 36393820 - 36393927
Alignment:
Q  43 tacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgc 142  Q
    |||||||| | ||| || ||||||||||||||||||||  ||||||||||  |||||||||||||| ||   ||||||||||||  ||||||| ||||||    
T  36393820 tacctaatgaagatcttatggcggaatcaaacttttgatgatatcttcagttgatctcagcaacgtcacccgcatatcgatccactggaacatattgtgc 36393919  T
Q  143 tgccaaaa 150  Q
    | ||||||    
T  36393920 tcccaaaa 36393927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 43 - 150
Target Start/End: Original strand, 46862190 - 46862297
Alignment:
Q  43 tacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgc 142  Q
    ||||| || ||||| |||||||||||||||||||||||  ||||||||||   ||||||||||||| ||   ||||||||||||  |||||||| |||||    
T  46862190 taccttatgacgatcttctggcggaatcaaacttttgatcatatcttcagttaatctcagcaacgtcactcgcatatcgatccactggaacatgctgtgc 46862289  T
Q  143 tgccaaaa 150  Q
    | ||||||    
T  46862290 tcccaaaa 46862297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 46 - 150
Target Start/End: Original strand, 2206036 - 2206140
Alignment:
Q  46 ctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgctgc 145  Q
    ||||| ||||| ||||||||||||||| || ||||  ||||||||||  |||||||||||||| ||   ||||||||||||  ||||||| ||||||| |    
T  2206036 ctaatgacgatcttctggcggaatcaagctgttgatgatatcttcagttgatctcagcaacgttacccgcatatcgatccactggaacatattgtgctcc 2206135  T
Q  146 caaaa 150  Q
    |||||    
T  2206136 caaaa 2206140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 58 - 150
Target Start/End: Complemental strand, 17183408 - 17183316
Alignment:
Q  58 ttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgctgccaaaa 150  Q
    ||||||| |||||||||||||||  ||||||||||  |||||||||||| | ||   ||||||||||||  ||||||||||||||| ||||||    
T  17183408 ttctggcagaatcaaacttttgatgatatcttcagttgatctcagcaacatcacccgcatatcgatccactggaacatgttgtgcttccaaaa 17183316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 46 - 150
Target Start/End: Complemental strand, 18237772 - 18237668
Alignment:
Q  46 ctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgctgc 145  Q
    ||||| ||||| |||||||||||||||||| ||||  ||||||||||  |||||||||||||| ||   |||| |||||||  |||||||| |||||| |    
T  18237772 ctaatgacgatcttctggcggaatcaaactgttgatgatatcttcagttgatctcagcaacgttacccgcataccgatccactggaacatgatgtgctcc 18237673  T
Q  146 caaaa 150  Q
    |||||    
T  18237672 caaaa 18237668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 61 - 141
Target Start/End: Complemental strand, 21650717 - 21650637
Alignment:
Q  61 tggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtg 141  Q
    ||||||||||| ||| |||| |||||||||||  |||||||||||||| ||  |||||||||||||  |||||||||||||    
T  21650717 tggcggaatcagactgttgataatatcttcagttgatctcagcaacgttacccacatatcgatccactggaacatgttgtg 21650637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 43 - 150
Target Start/End: Complemental strand, 42735473 - 42735366
Alignment:
Q  43 tacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgc 142  Q
    |||||||| ||||| |||| ||||||||||||||||||  ||||||||||  |||||||||||||| ||   ||||||||| ||   ||| |||||||||    
T  42735473 tacctaatgacgatcttcttgcggaatcaaacttttgatgatatcttcagttgatctcagcaacgtcacccgcatatcgattcactagaatatgttgtgc 42735374  T
Q  143 tgccaaaa 150  Q
    | ||||||    
T  42735373 tcccaaaa 42735366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 43 - 150
Target Start/End: Original strand, 43351096 - 43351202
Alignment:
Q  43 tacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgc 142  Q
    |||||||| ||||| |||||| ||||||| || |||||  ||||||||||  |||||||||||||| ||   ||||||||||||  ||||||||||||||    
T  43351096 tacctaatgacgatcttctggtggaatcagacatttgatgatatcttcagttgatctcagcaacgtcac-cccatatcgatccactggaacatgttgtgc 43351194  T
Q  143 tgccaaaa 150  Q
    | ||||||    
T  43351195 tcccaaaa 43351202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 66 - 143
Target Start/End: Original strand, 28114412 - 28114489
Alignment:
Q  66 gaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgct 143  Q
    |||||||| ||||||  ||||||||||  |||||||||||||| ||  |||| ||||||||| |||||||||||||||    
T  28114412 gaatcaaatttttgatgatatcttcagttgatctcagcaacgtcacccacatttcgatccattggaacatgttgtgct 28114489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 42 - 150
Target Start/End: Complemental strand, 2356501 - 2356393
Alignment:
Q  42 ctacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtg 141  Q
    ||||||||||||| | || | ||||||||||| ||||||  ||||||||||  ||||||| |||||| ||   ||||||||||||| |||||||| |||     
T  2356501 ctacctaatcacggtcttatagcggaatcaaatttttgatgatatcttcagttgatctcaacaacgttactcgcatatcgatccattggaacatgctgtt 2356402  T
Q  142 ctgccaaaa 150  Q
    || ||||||    
T  2356401 ctcccaaaa 2356393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 46 - 150
Target Start/End: Original strand, 9367119 - 9367223
Alignment:
Q  46 ctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgctgc 145  Q
    ||||| ||||| || ||||||||||||||||||||  ||||||||||  ||||| |||||| | ||   ||||||||||||  |||||||| |||||| |    
T  9367119 ctaatgacgatcttgtggcggaatcaaacttttgatgatatcttcagttgatctaagcaacttcacccgcatatcgatccactggaacatgctgtgctcc 9367218  T
Q  146 caaaa 150  Q
    |||||    
T  9367219 caaaa 9367223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 46 - 150
Target Start/End: Complemental strand, 20564967 - 20564863
Alignment:
Q  46 ctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgctgc 145  Q
    ||||| ||||| || ||||||||||||||||||||  ||||||||||  ||||| |||||| | ||   ||||||||||||  |||||||| |||||| |    
T  20564967 ctaatgacgatcttgtggcggaatcaaacttttgatgatatcttcagttgatctaagcaacttcacccgcatatcgatccactggaacatgctgtgctcc 20564868  T
Q  146 caaaa 150  Q
    |||||    
T  20564867 caaaa 20564863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 46 - 150
Target Start/End: Complemental strand, 41217822 - 41217718
Alignment:
Q  46 ctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgctgc 145  Q
    ||||| ||||| |||||| ||||||||  | ||||  ||||||||||  |||||||||||||| ||   ||||||||||||  ||||||||||||||| |    
T  41217822 ctaatgacgatcttctggtggaatcaagttgttgatgatatcttcagttgatctcagcaacgttacccgcatatcgatccactggaacatgttgtgctcc 41217723  T
Q  146 caaaa 150  Q
    |||||    
T  41217722 caaaa 41217718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 46 - 107
Target Start/End: Complemental strand, 30360724 - 30360663
Alignment:
Q  46 ctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacg 107  Q
    ||||| ||||| ||||||||||||||||||||| |  ||||||||||  |||||||||||||    
T  30360724 ctaatgacgatcttctggcggaatcaaactttttatgatatcttcagttgatctcagcaacg 30360663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 46 - 110
Target Start/End: Original strand, 26601777 - 26601841
Alignment:
Q  46 ctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtga 110  Q
    ||||| ||||| |||||||||||||||||| ||||  ||||||||||  ||||||| ||||||||    
T  26601777 ctaatgacgatcttctggcggaatcaaactattgatgatatcttcagttgatctcaacaacgtga 26601841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 46 - 150
Target Start/End: Original strand, 39477239 - 39477343
Alignment:
Q  46 ctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgctgc 145  Q
    ||||| ||||| |||||||||||||||  | || |  ||||||| ||  |||||||||||||| ||   ||||||||||||  ||||||||||||||| |    
T  39477239 ctaatgacgatcttctggcggaatcaagttgttaatgatatctttagttgatctcagcaacgtcacccgcatatcgatccactggaacatgttgtgctcc 39477338  T
Q  146 caaaa 150  Q
    |||||    
T  39477339 caaaa 39477343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 46 - 150
Target Start/End: Complemental strand, 40588757 - 40588653
Alignment:
Q  46 ctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgctgc 145  Q
    ||||| ||||| ||||||| |||||||  | ||||  ||||||||||  ||||||| |||||| ||   ||||||||||||  ||||||||||||||| |    
T  40588757 ctaatgacgatcttctggccgaatcaagttgttgatgatatcttcagttgatctcaacaacgttacccgcatatcgatccactggaacatgttgtgctcc 40588658  T
Q  146 caaaa 150  Q
    |||||    
T  40588657 caaaa 40588653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 177
Target Start/End: Original strand, 13304260 - 13304378
Alignment:
Q  59 tctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgctgccaaaaaatcgaga 158  Q
    |||||| |||||||||| |||| ||||||||||| |||||||| |||||   ||  ||| ||||||    |||||||  ||||||| | ||| |||||||    
T  13304260 tctggccgaatcaaactcttgataatatcttcaggcgatctcatcaacgaagcatccatttcgatcgtcgggaacattctgtgctgaccaaatatcgaga 13304359  T
Q  159 acatgctcctcacatcgtc 177  Q
    ||||| ||| |||||||||    
T  13304360 acatgttccccacatcgtc 13304378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 49
Target Start/End: Original strand, 16886467 - 16886505
Alignment:
Q  11 aagaatataaagacactacataataatgatgctacctaa 49  Q
    ||||| ||||||||| |||||||||||||||||||||||    
T  16886467 aagaaaataaagacagtacataataatgatgctacctaa 16886505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 61 - 150
Target Start/End: Complemental strand, 17839516 - 17839427
Alignment:
Q  61 tggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgctgccaaaa 150  Q
    ||||||||||||||||||||  |||||||||   ||||| |||||| | ||   ||||||||||||  |||||||| |||||| ||||||    
T  17839516 tggcggaatcaaacttttgatgatatcttcaattgatctaagcaacttcacccgcatatcgatccactggaacatgctgtgctcccaaaa 17839427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 101
Target Start/End: Complemental strand, 26926723 - 26926654
Alignment:
Q  32 aataatgatgctacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctca 101  Q
    ||||||||||| ||||||  |  || || |||| |||||||||| |||||||||||||||| ||||||||    
T  26926723 aataatgatgcaacctaaatataatcttgtggcagaatcaaactcttgagaatatcttcaggcgatctca 26926654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 145; Significance: 2e-76; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 19 - 199
Target Start/End: Complemental strand, 5584 - 5404
Alignment:
Q  19 aaagacactacataataatgatgctacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacata 118  Q
    ||||||||||||||||||||||||||||||||| |||| |||||||| ||||||||| |||||||||||||||| |||||||| ||||||||||||||||    
T  5584 aaagacactacataataatgatgctacctaatctcgatcttctggcgaaatcaaactgttgagaatatcttcaggcgatctcaacaacgtgacaaacata 5485  T
Q  119 tcgatccataggaacatgttgtgctgccaaaaaatcgagaacatgctcctcacatcgtcgtcgttctttaattctagccga 199  Q
    | ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  5484 ttgatccatgggaacatgttgtgctgccaaaaaatcgagaacatgctcctcacatcgtcgtcgttctttaactctagccga 5404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 120; Significance: 1e-61; HSPs: 52)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 8 - 195
Target Start/End: Original strand, 19262375 - 19262562
Alignment:
Q  8 tccaagaatataaagacactacataataatgatgctacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacg 107  Q
    ||||| || ||||||||||||||||||||||||||||||||||||  || ||| |||||||||||||| ||||||||||||||||  |||||||||||||    
T  19262375 tccaacaaaataaagacactacataataatgatgctacctaatcataatcttcaggcggaatcaaactgttgagaatatcttcagttgatctcagcaacg 19262474  T
Q  108 tgacaaacatatcgatccataggaacatgttgtgctgccaaaaaatcgagaacatgctcctcacatcgtcgtcgttctttaattctag 195  Q
    |||||||||||| |||||   |||||||| |||||||||||||||||| ||||||||||||||| |||||||||||| ||||||||||    
T  19262475 tgacaaacatattgatcctcgggaacatgatgtgctgccaaaaaatcgtgaacatgctcctcacgtcgtcgtcgttcgttaattctag 19262562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 57 - 200
Target Start/End: Original strand, 48706920 - 48707063
Alignment:
Q  57 gttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgctgccaaaaaatcga 156  Q
    ||||| || |||||||||| |||||||||||||||||||||||||||||||| ||| |||||||||||||| |||||| || ||||||||||||||||||    
T  48706920 gttctagcagaatcaaactcttgagaatatcttcagacgatctcagcaacgtaacatacatatcgatccatgggaacaagtggtgctgccaaaaaatcga 48707019  T
Q  157 gaacatgctcctcacatcgtcgtcgttctttaattctagccgac 200  Q
    |||||| ||| |||  |||| ||||||| |||||||||||||||    
T  48707020 gaacatactcttcatgtcgttgtcgttcattaattctagccgac 48707063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 57 - 189
Target Start/End: Complemental strand, 15471722 - 15471590
Alignment:
Q  57 gttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgctgccaaaaaatcga 156  Q
    ||||||||  ||||||||| |||||||||||||||| ||||||||||||||||||||||| ||| |||||  |||||||||||||||| ||||||||| |    
T  15471722 gttctggcataatcaaactcttgagaatatcttcaggcgatctcagcaacgtgacaaacacatcaatccacgggaacatgttgtgctgacaaaaaatcaa 15471623  T
Q  157 gaacatgctcctcacatcgtcgtcgttctttaa 189  Q
    ||||||| ||||||||||||||| |||| ||||    
T  15471622 gaacatgttcctcacatcgtcgttgttcgttaa 15471590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 42 - 200
Target Start/End: Original strand, 14772528 - 14772686
Alignment:
Q  42 ctacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaac-atgttgt 140  Q
    ||||||||||||||| ||||||| |||||||||| ||||||| |||||||   |||||| ||||| |||||||||||| |||  |  | ||| ||||| |    
T  14772528 ctacctaatcacgatcttctggcagaatcaaactgttgagaacatcttcaattgatctctgcaacatgacaaacatattgata-accgaaaccatgtttt 14772626  T
Q  141 gctgccaaaaaatcgagaacatgctcctcacatcgtcgtcgttctttaattctagccgac 200  Q
    ||  | ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14772627 gcgccaaaaaaatcgagaacatgctcctcacatcgtcgtcgttctttaattctagccgac 14772686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 43 - 150
Target Start/End: Complemental strand, 17697255 - 17697148
Alignment:
Q  43 tacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgc 142  Q
    |||||||||||||| |||||||||||||| ||| |||| |||||||||||  |||||||||||||| ||   ||||||||||||  ||||||||||||||    
T  17697255 tacctaatcacgatcttctggcggaatcagactcttgataatatcttcagttgatctcagcaacgtcacccgcatatcgatccactggaacatgttgtgc 17697156  T
Q  143 tgccaaaa 150  Q
    | ||||||    
T  17697155 tcccaaaa 17697148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 43 - 150
Target Start/End: Complemental strand, 36909770 - 36909663
Alignment:
Q  43 tacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgc 142  Q
    |||||||| ||||| |||||||||||||||||||||||  ||||||||||  |||||||||||||| ||   ||||||||||||  ||||||||||||||    
T  36909770 tacctaatgacgatcttctggcggaatcaaacttttgatgatatcttcagttgatctcagcaacgtcacccgcatatcgatccactggaacatgttgtgc 36909671  T
Q  143 tgccaaaa 150  Q
    | ||||||    
T  36909670 tcccaaaa 36909663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 43 - 150
Target Start/End: Original strand, 49926377 - 49926484
Alignment:
Q  43 tacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgc 142  Q
    |||||||| ||||| |||||||||||||||||||||||  ||||||||||  |||||||||||||| ||   ||||||||||||  ||||||||||||||    
T  49926377 tacctaatgacgatcttctggcggaatcaaacttttgatgatatcttcagttgatctcagcaacgtcacctgcatatcgatccactggaacatgttgtgc 49926476  T
Q  143 tgccaaaa 150  Q
    | ||||||    
T  49926477 tcccaaaa 49926484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 8 - 109
Target Start/End: Original strand, 21760350 - 21760451
Alignment:
Q  8 tccaagaatataaagacactacataataatgatgctacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacg 107  Q
    ||||| || ||||||||||||||||||||||||||||||||| ||  ||  | |||  |||||||||| ||||||||||||||||||||||||| |||||    
T  21760350 tccaataaaataaagacactacataataatgatgctacctaaacataattatatggtagaatcaaactgttgagaatatcttcagacgatctcatcaacg 21760449  T
Q  108 tg 109  Q
    ||    
T  21760450 tg 21760451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 42 - 150
Target Start/End: Complemental strand, 3658683 - 3658575
Alignment:
Q  42 ctacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtg 141  Q
    ||||||||| ||||| |||||||||||||||||||||||  ||||||||||  |||||||||||||| ||   ||||||||||||   ||||||||||||    
T  3658683 ctacctaatgacgatcttctggcggaatcaaacttttgatgatatcttcagttgatctcagcaacgttacttgcatatcgatccactagaacatgttgtg 3658584  T
Q  142 ctgccaaaa 150  Q
    || ||||||    
T  3658583 ctcccaaaa 3658575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 43 - 150
Target Start/End: Complemental strand, 6435981 - 6435874
Alignment:
Q  43 tacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgc 142  Q
    |||||||| ||||| |||||||||||||||||||||||  |||||||||   ||||||| |||||| ||  |||||||||||||  ||||||||||||||    
T  6435981 tacctaatgacgatcttctggcggaatcaaacttttgatgatatcttcacttgatctcaacaacgtcactcacatatcgatccactggaacatgttgtgc 6435882  T
Q  143 tgccaaaa 150  Q
    | ||||||    
T  6435881 tcccaaaa 6435874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 43 - 150
Target Start/End: Original strand, 14173755 - 14173862
Alignment:
Q  43 tacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgc 142  Q
    |||||||| ||||| |||||||||||||||||||||||  ||||||||||  |||||||||||||| ||   ||||||||||||  |||||||||||| |    
T  14173755 tacctaatgacgatcttctggcggaatcaaacttttgatgatatcttcagttgatctcagcaacgtcacccgcatatcgatccactggaacatgttgtcc 14173854  T
Q  143 tgccaaaa 150  Q
    | ||||||    
T  14173855 tcccaaaa 14173862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 46 - 150
Target Start/End: Complemental strand, 35576545 - 35576441
Alignment:
Q  46 ctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgctgc 145  Q
    ||||| ||||| |||||||||||||||||||||||  ||||||||||  |||||||||||||| ||   ||||||||||||  |||||||| |||||| |    
T  35576545 ctaatgacgatcttctggcggaatcaaacttttgatgatatcttcagttgatctcagcaacgtcacccgcatatcgatccaccggaacatgctgtgctcc 35576446  T
Q  146 caaaa 150  Q
    |||||    
T  35576445 caaaa 35576441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 43 - 150
Target Start/End: Original strand, 17686358 - 17686465
Alignment:
Q  43 tacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgc 142  Q
    |||||||| ||||| |||||||||||||||||||||||  ||||||||||  ||||||||| |||| ||   ||||||||||||  |||| |||||||||    
T  17686358 tacctaatgacgatcttctggcggaatcaaacttttgatgatatcttcagttgatctcagctacgtcacccgcatatcgatccactggaagatgttgtgc 17686457  T
Q  143 tgccaaaa 150  Q
    | ||||||    
T  17686458 tcccaaaa 17686465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 43 - 150
Target Start/End: Complemental strand, 37778288 - 37778181
Alignment:
Q  43 tacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgc 142  Q
    |||||||| ||||| |||||||||||||||||||||||  ||||||||||  |||||||||||||| ||   |||||||||| |  |||||||||||| |    
T  37778288 tacctaatgacgatcttctggcggaatcaaacttttgatgatatcttcagttgatctcagcaacgtcacccgcatatcgatcaactggaacatgttgttc 37778189  T
Q  143 tgccaaaa 150  Q
    | ||||||    
T  37778188 tcccaaaa 37778181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 43 - 150
Target Start/End: Complemental strand, 49396913 - 49396806
Alignment:
Q  43 tacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgc 142  Q
    |||||||| ||||| ||||||||||||||||||||||   ||||||||||  |||||||||||||| ||   |||||| |||||  ||||||||||||||    
T  49396913 tacctaatgacgatcttctggcggaatcaaacttttgttgatatcttcagttgatctcagcaacgtcacccgcatatcaatccactggaacatgttgtgc 49396814  T
Q  143 tgccaaaa 150  Q
    | ||||||    
T  49396813 tcccaaaa 49396806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 42 - 143
Target Start/End: Original strand, 21484639 - 21484740
Alignment:
Q  42 ctacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtg 141  Q
    ||||||||| ||||| |||||| | ||||||||||||||  ||||||||||  |||||||||||||| ||   ||||||||||||  |||||||||||||    
T  21484639 ctacctaatgacgatcttctggtgaaatcaaacttttgatgatatcttcagttgatctcagcaacgtcactcgcatatcgatccactggaacatgttgtg 21484738  T
Q  142 ct 143  Q
    ||    
T  21484739 ct 21484740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 58 - 143
Target Start/End: Original strand, 24270375 - 24270460
Alignment:
Q  58 ttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgct 143  Q
    |||||||||||||||||||||||  ||||||||||  |||||||||||||| ||   ||||||||||||  |||||||||||||||    
T  24270375 ttctggcggaatcaaacttttgatgatatcttcagttgatctcagcaacgtcacccgcatatcgatccactggaacatgttgtgct 24270460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 46 - 150
Target Start/End: Original strand, 35586929 - 35587033
Alignment:
Q  46 ctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgctgc 145  Q
    ||||| ||||| |||||||||||||||||||||||  |||||||||   ||||||||||| || ||   ||||||||||||  ||||||||||||||| |    
T  35586929 ctaatgacgatcttctggcggaatcaaacttttgatgatatcttcaattgatctcagcaaggtcacccgcatatcgatccactggaacatgttgtgctcc 35587028  T
Q  146 caaaa 150  Q
    |||||    
T  35587029 caaaa 35587033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 46 - 150
Target Start/End: Original strand, 39856906 - 39857010
Alignment:
Q  46 ctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgctgc 145  Q
    ||||| ||||| ||||||| |||||||||||||||  ||||||||||  |||||||||||||| ||   ||||||||||||  ||||||||| ||||| |    
T  39856906 ctaatgacgatcttctggcagaatcaaacttttgatgatatcttcagttgatctcagcaacgtcacccgcatatcgatccactggaacatgtcgtgctcc 39857005  T
Q  146 caaaa 150  Q
    |||||    
T  39857006 caaaa 39857010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 46 - 150
Target Start/End: Complemental strand, 49427593 - 49427489
Alignment:
Q  46 ctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgctgc 145  Q
    ||||| ||||| |||||||||||||||||||||||  ||||||||||  ||||| |||||| | ||   ||||||||||||  ||||||||||||||| |    
T  49427593 ctaatgacgatcttctggcggaatcaaacttttgatgatatcttcagttgatctaagcaacttcacccgcatatcgatccactggaacatgttgtgctcc 49427494  T
Q  146 caaaa 150  Q
    |||||    
T  49427493 caaaa 49427489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 46 - 153
Target Start/End: Original strand, 12791273 - 12791380
Alignment:
Q  46 ctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgctgc 145  Q
    ||||| ||||| |||||||||||||||||||||||  ||||||||||  |||||||  ||||| ||   ||||||||||||  ||||||||||||||| |    
T  12791273 ctaatgacgatcttctggcggaatcaaacttttgatgatatcttcagttgatctcaaaaacgtcacccgcatatcgatccactggaacatgttgtgctcc 12791372  T
Q  146 caaaaaat 153  Q
     |||||||    
T  12791373 aaaaaaat 12791380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 43 - 150
Target Start/End: Original strand, 38046431 - 38046538
Alignment:
Q  43 tacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgc 142  Q
    |||||||| ||||| |||||| ||||||||||||||||  ||||||||||  |||||||||||||| ||   ||||| |||| |  ||||||||||||||    
T  38046431 tacctaatgacgatcttctggtggaatcaaacttttgatgatatcttcagttgatctcagcaacgtcaccggcatattgatcgactggaacatgttgtgc 38046530  T
Q  143 tgccaaaa 150  Q
    | ||||||    
T  38046531 tcccaaaa 38046538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 42 - 150
Target Start/End: Complemental strand, 5765416 - 5765308
Alignment:
Q  42 ctacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtg 141  Q
    ||||||||||||||| |||||||||||||| ||  |||| ||||||||||   |||||||||||||| ||   ||||||||||||   ||||||||| ||    
T  5765416 ctacctaatcacgatcttctggcggaatcagacggttgataatatcttcatttgatctcagcaacgttacccgcatatcgatccactagaacatgttctg 5765317  T
Q  142 ctgccaaaa 150  Q
    || ||||||    
T  5765316 ctcccaaaa 5765308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 42 - 126
Target Start/End: Complemental strand, 13283915 - 13283831
Alignment:
Q  42 ctacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatcca 126  Q
    ||||||||||||||| |||||||||||||| ||| |||| ||||| |||||  |||||||||||||| ||   ||||||||||||    
T  13283915 ctacctaatcacgatcttctggcggaatcagactgttgataatatattcagttgatctcagcaacgttacctgcatatcgatcca 13283831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 46 - 150
Target Start/End: Original strand, 13635297 - 13635401
Alignment:
Q  46 ctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgctgc 145  Q
    ||||| ||||| |||||||||||||||||||||||  ||||||||||  ||||| | |||| | ||   ||||||||||||  ||||||||||||||| |    
T  13635297 ctaatgacgatcttctggcggaatcaaacttttgatgatatcttcagttgatctaaccaacttcacccgcatatcgatccactggaacatgttgtgctcc 13635396  T
Q  146 caaaa 150  Q
    |||||    
T  13635397 caaaa 13635401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 42 - 150
Target Start/End: Complemental strand, 18842649 - 18842541
Alignment:
Q  42 ctacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtg 141  Q
    |||||||||| |||| ||||||||| |||| ||| |||| |||||||||||  |||||||||||||| ||   ||||||||||||  ||||||||  |||    
T  18842649 ctacctaatcccgatcttctggcgggatcagactcttgacaatatcttcagttgatctcagcaacgttacccgcatatcgatccactggaacatgccgtg 18842550  T
Q  142 ctgccaaaa 150  Q
    || ||||||    
T  18842549 ctcccaaaa 18842541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 46 - 150
Target Start/End: Original strand, 50068259 - 50068363
Alignment:
Q  46 ctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgctgc 145  Q
    ||||| ||||| ||||||||||||||| || ||||  ||||||||||  |||||||||||||| ||   ||||||||||||  |||||||| |||||| |    
T  50068259 ctaatgacgatcttctggcggaatcaagctgttgacgatatcttcagttgatctcagcaacgttacccgcatatcgatccactggaacatgatgtgctcc 50068358  T
Q  146 caaaa 150  Q
    |||||    
T  50068359 caaaa 50068363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 43 - 150
Target Start/End: Complemental strand, 13973133 - 13973026
Alignment:
Q  43 tacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgc 142  Q
    |||||||| ||||| || ||||||||||||||||||||  |||||||||   ||||||||||| || ||   ||||| ||||||  ||||||||||||||    
T  13973133 tacctaatgacgatcttatggcggaatcaaacttttgatgatatcttcaattgatctcagcaatgtcacccgcatattgatccactggaacatgttgtgc 13973034  T
Q  143 tgccaaaa 150  Q
    | ||||||    
T  13973033 tcccaaaa 13973026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 66 - 189
Target Start/End: Complemental strand, 27799852 - 27799729
Alignment:
Q  66 gaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgctgccaaaaaatcgagaacatgct 165  Q
    |||||||||| ||||||||||||||||  |||  |||||||||  ||  ||| ||||||||  | |||||||||||||| | ||| || |||||||||||    
T  27799852 gaatcaaactcttgagaatatcttcaggagattccagcaacgtagcatccatctcgatccacggaaacatgttgtgctggccaaatattgagaacatgct 27799753  T
Q  166 cctcacatcgtcgtcgttctttaa 189  Q
    | |||| || ||||||||| ||||    
T  27799752 catcacgtcatcgtcgttcgttaa 27799729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 47 - 150
Target Start/End: Original strand, 42571777 - 42571880
Alignment:
Q  47 taatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgctgcc 146  Q
    |||| ||||| |||||||||||||||  | ||||  ||||||||||  |||||||||||||| ||   ||||||||||||  ||||||||||||||| ||    
T  42571777 taatgacgatcttctggcggaatcaagttgttgatgatatcttcagttgatctcagcaacgttacccgcatatcgatccactggaacatgttgtgctccc 42571876  T
Q  147 aaaa 150  Q
    ||||    
T  42571877 aaaa 42571880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 43 - 136
Target Start/End: Original strand, 40533283 - 40533376
Alignment:
Q  43 tacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatg 136  Q
    |||||||| ||||| |||||||||||| ||||||||||  ||||||||||  |||||| ||||||| ||   ||||||||||||  ||||||||    
T  40533283 tacctaatgacgatcttctggcggaattaaacttttgatgatatcttcagttgatctcggcaacgttacccgcatatcgatccactggaacatg 40533376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 43 - 127
Target Start/End: Original strand, 16532087 - 16532171
Alignment:
Q  43 tacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccat 127  Q
    |||||||||||||| |||| ||| ||||| ||| |||| |||||||||||  |||||||||||||| |||  |||||| ||||||    
T  16532087 tacctaatcacgatcttctagcgaaatcagactattgataatatcttcagttgatctcagcaacgttacacgcatatcaatccat 16532171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 46 - 150
Target Start/End: Original strand, 27486690 - 27486794
Alignment:
Q  46 ctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgctgc 145  Q
    ||||| ||||| ||| |||||||||||  | ||||  ||||||||||  |||||||||||||| ||   ||||||||||||  ||||||||||||||| |    
T  27486690 ctaatgacgatcttcaggcggaatcaagttgttgatgatatcttcagttgatctcagcaacgtcacccgcatatcgatccaatggaacatgttgtgctcc 27486789  T
Q  146 caaaa 150  Q
    |||||    
T  27486790 caaaa 27486794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 44 - 136
Target Start/End: Complemental strand, 35185179 - 35185087
Alignment:
Q  44 acctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatg 136  Q
    ||||||| ||||| |||||||||||||||||||||||  |||||||||   ||| |||||||||| ||   ||||||||||||  ||||||||    
T  35185179 acctaatgacgatcttctggcggaatcaaacttttgatgatatcttcaattgatttcagcaacgtcacctgcatatcgatccactggaacatg 35185087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 46 - 150
Target Start/End: Complemental strand, 45689325 - 45689221
Alignment:
Q  46 ctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgctgc 145  Q
    ||||| ||||| || |||||||||||| || ||||  ||||||||||  |||||||||||||| ||   |||||| |||||  ||||||||||||||| |    
T  45689325 ctaatgacgatcttatggcggaatcaagctgttgatgatatcttcagttgatctcagcaacgtcacccgcatatccatccactggaacatgttgtgctcc 45689226  T
Q  146 caaaa 150  Q
    |||||    
T  45689225 caaaa 45689221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 119 - 170
Target Start/End: Complemental strand, 12026675 - 12026624
Alignment:
Q  119 tcgatccataggaacatgttgtgctgccaaaaaatcgagaacatgctcctca 170  Q
    ||||||| |||||||||||||||||| | ||| |||||||||||||||||||    
T  12026675 tcgatccttaggaacatgttgtgctgaccaaatatcgagaacatgctcctca 12026624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 150
Target Start/End: Complemental strand, 18170234 - 18170127
Alignment:
Q  43 tacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgc 142  Q
    |||||||| ||||| ||||||||||||||||| |||||  ||||||||||  || |||||||| || ||   |||||||||| |  |||||||| |||||    
T  18170234 tacctaatgacgatcttctggcggaatcaaacctttgatgatatcttcagttgagctcagcaatgtcacccgcatatcgatctactggaacatgatgtgc 18170135  T
Q  143 tgccaaaa 150  Q
    | ||||||    
T  18170134 tcccaaaa 18170127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 126
Target Start/End: Complemental strand, 23342850 - 23342767
Alignment:
Q  43 tacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatcca 126  Q
    |||||||| ||||| |||||| ||||||||||||||||  ||||||||||   ||||||||||||| ||   ||||||||||||    
T  23342850 tacctaatgacgatcttctggaggaatcaaacttttgatgatatcttcagtttatctcagcaacgttacccgcatatcgatcca 23342767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 58 - 143
Target Start/End: Complemental strand, 48215392 - 48215307
Alignment:
Q  58 ttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgct 143  Q
    |||||||||||||||||||||||  ||||||||||  ||||| |||||| | ||   ||||||||||||  |||||||| ||||||    
T  48215392 ttctggcggaatcaaacttttgatgatatcttcagttgatctaagcaacttcacccgcatatcgatccactggaacatgctgtgct 48215307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 109
Target Start/End: Original strand, 11789108 - 11789213
Alignment:
Q  8 tccaagaatataaagacactacataataatgatgctacctaat----cacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagc 103  Q
    ||||| || |||||||| |||||||| |||||||||| ||| |    ||  || ||||||| |||||||||| || ||||||||||||| |||||||| |    
T  11789108 tccaacaaaataaagactctacataacaatgatgctagctacttcaacataattttctggcagaatcaaactgtttagaatatcttcaggcgatctcaac 11789207  T
Q  104 aacgtg 109  Q
    ||||||    
T  11789208 aacgtg 11789213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 126
Target Start/End: Original strand, 35526189 - 35526257
Alignment:
Q  58 ttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatcca 126  Q
    |||| ||||||||||||||||||  ||||||||||  |||||||||||||| ||   ||||||||||||    
T  35526189 ttctagcggaatcaaacttttgatgatatcttcagttgatctcagcaacgtcacccgcatatcgatcca 35526257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 46 - 150
Target Start/End: Original strand, 39224197 - 39224301
Alignment:
Q  46 ctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgctgc 145  Q
    ||||| ||||| |||||||||||||||  | ||||  |||| || ||  |||||||||||||| ||   ||||||||||||  ||||||||||||||| |    
T  39224197 ctaatgacgatcttctggcggaatcaagttgttgatgatatatttagttgatctcagcaacgtcacccgcatatcgatccactggaacatgttgtgctcc 39224296  T
Q  146 caaaa 150  Q
    |||||    
T  39224297 caaaa 39224301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 46 - 142
Target Start/End: Original strand, 44337319 - 44337415
Alignment:
Q  46 ctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgc 142  Q
    ||||| ||||| |||||||||||||| | | ||||  ||||||||||  |||||||||||||| ||   ||||||||||||  | ||||||||||||    
T  44337319 ctaatgacgatcttctggcggaatcatattgttgatgatatcttcagttgatctcagcaacgtcacccgcatatcgatccactgaaacatgttgtgc 44337415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 46 - 150
Target Start/End: Complemental strand, 44597907 - 44597803
Alignment:
Q  46 ctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgctgc 145  Q
    ||||| ||||| ||| |||||||||||  | ||||  ||||||||||  ||||||| |||||| ||  |||||||||||||  |||||||| |||||| |    
T  44597907 ctaatgacgatcttccggcggaatcaagttgttgatgatatcttcagttgatctcatcaacgtcacccacatatcgatccactggaacatgctgtgctcc 44597808  T
Q  146 caaaa 150  Q
    |||||    
T  44597807 caaaa 44597803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 46 - 150
Target Start/End: Original strand, 46180280 - 46180384
Alignment:
Q  46 ctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgctgc 145  Q
    ||||| ||||| ||||||| ||||||| || ||||  |||||||||   ||||||| |||||| ||  |||||||||||||  |||||||| |||||| |    
T  46180280 ctaatgacgatcttctggcagaatcaagctgttgatgatatcttcaattgatctcaacaacgttacccacatatcgatccactggaacatgctgtgctcc 46180379  T
Q  146 caaaa 150  Q
    |||||    
T  46180380 caaaa 46180384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 150
Target Start/End: Original strand, 48568416 - 48568508
Alignment:
Q  58 ttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgctgccaaaa 150  Q
    |||||||| ||||||  | ||||  ||||||||||  |||||||||||||| ||   ||||||||||||  ||||||||||||||| ||||||    
T  48568416 ttctggcgaaatcaagttgttgatgatatcttcagttgatctcagcaacgttacccgcatatcgatccactggaacatgttgtgctcccaaaa 48568508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 46 - 150
Target Start/End: Complemental strand, 51270008 - 51269904
Alignment:
Q  46 ctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgctgc 145  Q
    ||||| ||||| |||||||||||||||  | ||||  ||||||||||  |||| ||||||||| ||   ||||||||||||  |||||||| |||||| |    
T  51270008 ctaatgacgatcttctggcggaatcaagttgttgatgatatcttcagttgatcccagcaacgtcacccgcatatcgatccactggaacatgctgtgctcc 51269909  T
Q  146 caaaa 150  Q
    |||||    
T  51269908 caaaa 51269904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 150
Target Start/End: Complemental strand, 17372936 - 17372829
Alignment:
Q  43 tacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgc 142  Q
    |||||||| ||||| |||||||| ||| ||||||| ||  ||||||||||  ||||||| |||||| |||   |||||||||||  |||| ||| |||||    
T  17372936 tacctaatgacgatcttctggcgaaattaaactttcgatgatatcttcagttgatctcatcaacgttacacgtatatcgatccactggaatatggtgtgc 17372837  T
Q  143 tgccaaaa 150  Q
    | ||||||    
T  17372836 tcccaaaa 17372829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 127
Target Start/End: Original strand, 29707547 - 29707622
Alignment:
Q  52 acgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccat 127  Q
    ||||| |||| ||||||||||||||||||  ||||||| ||  |||||||||||||| ||   |||||||||||||    
T  29707547 acgatcttctagcggaatcaaacttttgatgatatctttagttgatctcagcaacgtcacccgcatatcgatccat 29707622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 92
Target Start/End: Original strand, 24363796 - 24363846
Alignment:
Q  42 ctacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcag 92  Q
    ||||||||||||||| ||||  |||||||||||| |||| |||||||||||    
T  24363796 ctacctaatcacgatcttctaacggaatcaaactcttgataatatcttcag 24363846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 150
Target Start/End: Complemental strand, 19160511 - 19160419
Alignment:
Q  58 ttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgctgccaaaa 150  Q
    |||||||||||||||||||||||  |||||||||   ||||| |||||| | ||   ||||||||||||  |||||||| |||| | ||||||    
T  19160511 ttctggcggaatcaaacttttgatgatatcttcaattgatctaagcaacttcacccgcatatcgatccactggaacatgctgtgttcccaaaa 19160419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 61 - 105
Target Start/End: Complemental strand, 26793507 - 26793463
Alignment:
Q  61 tggcggaatcaaacttttgagaatatcttcagacgatctcagcaa 105  Q
    |||| |||||||||| |||||||||||||| | ||||||||||||    
T  26793507 tggccgaatcaaactcttgagaatatcttctggcgatctcagcaa 26793463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 113; Significance: 2e-57; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 17 - 197
Target Start/End: Original strand, 15798053 - 15798233
Alignment:
Q  17 ataaagacactacataataatgatgctacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaaca 116  Q
    ||||||||| |||||||||| |||||||||||||||  || || ||||||||||||||| |||||||||||||||| | |||||| ||||||||||||||    
T  15798053 ataaagacaatacataataacgatgctacctaatcataatcttttggcggaatcaaactgttgagaatatcttcaggcaatctcatcaacgtgacaaaca 15798152  T
Q  117 tatcgatccataggaacatgttgtgctgccaaaaaatcgagaacatgctcctcacatcgtcgtcgttctttaattctagcc 197  Q
    |||| |||||  | ||||||||||||||||||||||||||||||||||||||||| ||||| |||||| ||||||||||||    
T  15798153 tatcaatccacggaaacatgttgtgctgccaaaaaatcgagaacatgctcctcacgtcgtcatcgttcgttaattctagcc 15798233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 42 - 194
Target Start/End: Original strand, 25360581 - 25360734
Alignment:
Q  42 ctacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaa-cgtgacaaacatatcgatccataggaacatgttgt 140  Q
    ||||||||||||||| ||||| |||||||||||| |||| || |||||||| |||||||||||| |||||||||||||||||||||   |||||||||||    
T  25360581 ctacctaatcacgatcttctgacggaatcaaactgttgaaaacatcttcaggcgatctcagcaaacgtgacaaacatatcgatccacgagaacatgttgt 25360680  T
Q  141 gctgccaaaaaatcgagaacatgctcctcacatcgtcgtcgttctttaattcta 194  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  25360681 gctgccaaaaaatcgagaacatgctcctcacgtcgtcgtcgttctttaattcta 25360734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 8 - 196
Target Start/End: Complemental strand, 19748310 - 19748123
Alignment:
Q  8 tccaagaatataaagacactacataataatgatgctacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacg 107  Q
    ||||| || ||||||||| ||||||||||||| ||||||||||||  || || ||||||||||||| | |||||||||||||||| ||||||||||||||    
T  19748310 tccaacaaaataaagacaatacataataatgacgctacctaatcataatcttatggcggaatcaaattgttgagaatatcttcaggcgatctcagcaacg 19748211  T
Q  108 tgacaaacatatcgatccataggaacatgttgtgctgccaaaaaatcgagaacatgctcctcacatcgtcgtcgttctttaattctagc 196  Q
    | |||||||||||||||||  | ||||||||||||||||||||||| ||||||||| || |||| |||||||||||| |||||||||||    
T  19748210 t-acaaacatatcgatccacggaaacatgttgtgctgccaaaaaatggagaacatgttcttcacgtcgtcgtcgttcgttaattctagc 19748123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 42 - 196
Target Start/End: Complemental strand, 18920943 - 18920789
Alignment:
Q  42 ctacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaa-catgttgt 140  Q
    ||||||||||||||| |||||||||||||||||| ||||||||||||||||  |||||| |||||||||||||||||||||| ||| |||| ||||||||    
T  18920943 ctacctaatcacgatcttctggcggaatcaaactgttgagaatatcttcagttgatctctgcaacgtgacaaacatatcgat-catcggaaccatgttgt 18920845  T
Q  141 gctgccaaaaaatcgagaacatgctcctcacatcgtcgtcgttctttaattctagc 196  Q
    |||||||||||||||||||||| |||||||| |||||| |||||||||| ||||||    
T  18920844 gctgccaaaaaatcgagaacatactcctcacgtcgtcgccgttctttaactctagc 18920789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 42 - 200
Target Start/End: Original strand, 36311943 - 36312101
Alignment:
Q  42 ctacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtg 141  Q
    ||||||||||||||| ||||||| |||| ||||| ||||||| |||||||| ||||||||||||||||||||||| || |||| |  |||||||| ||||    
T  36311943 ctacctaatcacgatcttctggcagaattaaactattgagaagatcttcaggcgatctcagcaacgtgacaaacacattgatcaacgggaacatgatgtg 36312042  T
Q  142 ctgccaaaaaatcgagaacatgctcctcacatcgtcgtcgttctttaattctagccgac 200  Q
     |||||||||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  36312043 gtgccaaaaaatcgagaacatgctcctcacatcgtcaacgttctttaattctagccgac 36312101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 8 - 200
Target Start/End: Original strand, 23228634 - 23228823
Alignment:
Q  8 tccaagaatataaagacactacataataatgatgctacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacg 107  Q
    ||||| || |||||||||||||||| |||| ||||||||||||||  || |||| ||||||||||||| || ||||||||||||   ||||||| |||||    
T  23228634 tccaacaaaataaagacactacatattaataatgctacctaatcataattttctagcggaatcaaactgttcagaatatcttcaagtgatctcaacaacg 23228733  T
Q  108 tgacaaacatatcgatccataggaacatgttgtgctgccaaaaaatcgagaacatgctcctcacatcgtcgtcgttctttaattctagccgac 200  Q
    |||||||||||||||| ||  ||||||||  |||||||||||||||||||||||| |||| ||   ||||||||||| |||||| ||||||||    
T  23228734 tgacaaacatatcgattcacgggaacatgcggtgctgccaaaaaatcgagaacatcctcccca---cgtcgtcgttcgttaattttagccgac 23228823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 42 - 197
Target Start/End: Original strand, 17195357 - 17195511
Alignment:
Q  42 ctacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgac--aaacatatcgatccataggaacatgttg 139  Q
    ||||||||||||||| |||||||||||||||| | |||| |||||||| ||  |||||||||||||||||  ||||||||||||  |  | | |||| ||    
T  17195357 ctacctaatcacgatcttctggcggaatcaaattgttgataatatctttagttgatctcagcaacgtgacaaaaacatatcgataaacggaaccatgatg 17195456  T
Q  140 tgctgccaaaaaatcgagaacatgctcctcacatcgtcgtcgttctttaattctagcc 197  Q
    |||||||||||||| ||||||||||||||||   ||||||||||||||||||||||||    
T  17195457 tgctgccaaaaaatggagaacatgctcctca---cgtcgtcgttctttaattctagcc 17195511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 46 - 200
Target Start/End: Original strand, 13131080 - 13131231
Alignment:
Q  46 ctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgctgc 145  Q
    ||||||||||| |||| ||  ||||||| | ||||||||||||||||  |||||| ||||||||||||||||||||||  | || | |||| |||||| |    
T  13131080 ctaatcacgatcttctagcaaaatcaaaatgttgagaatatcttcagttgatctctgcaacgtgacaaacatatcgataaacagaaccatgatgtgctac 13131179  T
Q  146 caaaaaatcgagaacatgctcctcacatcgtcgtcgttctttaattctagccgac 200  Q
    |||||||| ||||||||||||||||   ||||||||||||||||||||| |||||    
T  13131180 caaaaaattgagaacatgctcctca---cgtcgtcgttctttaattctaaccgac 13131231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 43 - 150
Target Start/End: Original strand, 4724073 - 4724180
Alignment:
Q  43 tacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgc 142  Q
    |||||||| ||||| |||||||||||||||||||||||  ||||||||||  |||||||||||||| ||   ||||||||||||  ||||||||||||||    
T  4724073 tacctaatgacgatcttctggcggaatcaaacttttgatgatatcttcagttgatctcagcaacgtcacccgcatatcgatccactggaacatgttgtgc 4724172  T
Q  143 tgccaaaa 150  Q
    | ||||||    
T  4724173 tcccaaaa 4724180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 118 - 189
Target Start/End: Original strand, 12067657 - 12067728
Alignment:
Q  118 atcgatccataggaacatgttgtgctgccaaaaaatcgagaacatgctcctcacatcgtcgtcgttctttaa 189  Q
    ||||||||| | ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  12067657 atcgatccacatgaacatgttgtgctgacaaaaaatcgagaacatgctcctcacatcgtcgtcgttcgttaa 12067728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 42 - 150
Target Start/End: Complemental strand, 33370863 - 33370755
Alignment:
Q  42 ctacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtg 141  Q
    ||||||||||| ||| |||||||||||||| ||| |||| |||||||||||  |||||||||||||| ||   ||||||||||||  |||||||||||||    
T  33370863 ctacctaatcatgatcttctggcggaatcagactgttgataatatcttcagttgatctcagcaacgttacccgcatatcgatccactggaacatgttgtg 33370764  T
Q  142 ctgccaaaa 150  Q
    || ||||||    
T  33370763 ctcccaaaa 33370755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 43 - 142
Target Start/End: Original strand, 36350313 - 36350412
Alignment:
Q  43 tacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgc 142  Q
    |||||||| ||||| |||||| ||||||||||||||||  ||||||||||  |||||||||||||| ||  |||||||||||||  ||||||||||||||    
T  36350313 tacctaatgacgatcttctggtggaatcaaacttttgatgatatcttcagttgatctcagcaacgtcacctacatatcgatccactggaacatgttgtgc 36350412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 8 - 106
Target Start/End: Complemental strand, 10976053 - 10975955
Alignment:
Q  8 tccaagaatataaagacactacataataatgatgctacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaac 106  Q
    ||||| || ||||||||||||||||||||||||| ||| ||| ||  || || |||| |||||||||| |||||||||| |||||||||||||||||||    
T  10976053 tccaacaaaataaagacactacataataatgatgttacataaacataatcttgtggcagaatcaaactcttgagaatatattcagacgatctcagcaac 10975955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 8 - 101
Target Start/End: Complemental strand, 28718309 - 28718216
Alignment:
Q  8 tccaagaatataaagacactacataataatgatgctacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctca 101  Q
    ||||| || ||||| ||||||||||||||||||||||||||| ||  || |||||||  ||||||||| |||||||||||||||| ||||||||    
T  28718309 tccaacaaaataaaaacactacataataatgatgctacctaaacataattttctggcataatcaaactgttgagaatatcttcaggcgatctca 28718216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 66 - 199
Target Start/End: Complemental strand, 37396898 - 37396765
Alignment:
Q  66 gaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgctgccaaaaaatcgagaacatgct 165  Q
    |||||||||| ||||||||||||||||  ||||||||||||||  ||  ||| ||||||  | |||||||||||||||| | ||| |||||||||||| |    
T  37396898 gaatcaaactcttgagaatatcttcaggtgatctcagcaacgtagcatccatctcgatcgttgggaacatgttgtgctgaccaaatatcgagaacatgat 37396799  T
Q  166 cctcacatcgtcgtcgttctttaattctagccga 199  Q
      |||| ||||| |||||| |||| |||||||||    
T  37396798 attcacgtcgtcctcgttcgttaactctagccga 37396765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 43 - 150
Target Start/End: Original strand, 1400301 - 1400408
Alignment:
Q  43 tacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgc 142  Q
    |||||||| ||||| |||||||||||||||||||||||  ||||||||||  |||||||||||||| ||   ||||| ||||||  |||||||| |||||    
T  1400301 tacctaatgacgatcttctggcggaatcaaacttttgatgatatcttcagttgatctcagcaacgtcacccgcatatggatccactggaacatgatgtgc 1400400  T
Q  143 tgccaaaa 150  Q
    | ||||||    
T  1400401 tcccaaaa 1400408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 20 - 108
Target Start/End: Complemental strand, 21294057 - 21293971
Alignment:
Q  20 aagacactacataataatgatgctacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgt 108  Q
    |||||||| | |||| |||||||||||||| ||  || ||||||| |||||||||||  ||||||||||||||||||||||||||||||    
T  21294057 aagacacttcctaatcatgatgctacctaaacataattttctggcagaatcaaactt--gagaatatcttcagacgatctcagcaacgt 21293971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 46 - 150
Target Start/End: Complemental strand, 8538159 - 8538055
Alignment:
Q  46 ctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgctgc 145  Q
    ||||| ||||| |||||||||||||||||||||||  ||||||||||  ||||| |||||| | ||   ||||||||||||  ||||||||||||||| |    
T  8538159 ctaatgacgatcttctggcggaatcaaacttttgatgatatcttcagttgatctaagcaacttcacccgcatatcgatccactggaacatgttgtgctcc 8538060  T
Q  146 caaaa 150  Q
    |||||    
T  8538059 caaaa 8538055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 29 - 171
Target Start/End: Original strand, 16418085 - 16418227
Alignment:
Q  29 cataataatgatgctacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccata 128  Q
    ||||||||||||||| ||||| ||  || ||||||| || ||||||| ||||||||||||||||  ||||||||||| || |||  ||| || ||||       
T  16418085 cataataatgatgctccctaaacataatcttctggcagagtcaaactcttgagaatatcttcaggtgatctcagcaatgtaacatccatctcaatcctcg 16418184  T
Q  129 ggaacatgttgtgctgccaaaaaatcgagaacatgctcctcac 171  Q
    |||||||||||||||| ||||| |  |||||| || |||||||    
T  16418185 ggaacatgttgtgctgtcaaaatacggagaacgtgatcctcac 16418227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 44 - 150
Target Start/End: Complemental strand, 35565478 - 35565372
Alignment:
Q  44 acctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgct 143  Q
    ||||||| ||||| ||||||||||||||||||| |||  ||||||| ||  |||||||||||||| ||   ||||||||||||   ||||||||||||||    
T  35565478 acctaatgacgatcttctggcggaatcaaacttctgatgatatctttagttgatctcagcaacgtcacccgcatatcgatccactagaacatgttgtgct 35565379  T
Q  144 gccaaaa 150  Q
     ||||||    
T  35565378 cccaaaa 35565372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 46 - 150
Target Start/End: Original strand, 7231 - 7335
Alignment:
Q  46 ctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgctgc 145  Q
    ||||| ||||| |||||||||||||||||||||||  ||||||||||  ||||| |||||| | ||   ||||||||||||  |||||||| |||||| |    
T  7231 ctaatgacgatcttctggcggaatcaaacttttgatgatatcttcagttgatctaagcaacttcacccgcatatcgatccactggaacatgctgtgctcc 7330  T
Q  146 caaaa 150  Q
    |||||    
T  7331 caaaa 7335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 58 - 150
Target Start/End: Original strand, 8576155 - 8576247
Alignment:
Q  58 ttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgctgccaaaa 150  Q
    |||||||||||||||||||||||  ||||||||||  ||||| |||||| | ||   ||||||||||||  ||||||||||||||| ||||||    
T  8576155 ttctggcggaatcaaacttttgatgatatcttcagttgatctaagcaacttcacccgcatatcgatccaccggaacatgttgtgctcccaaaa 8576247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 46 - 150
Target Start/End: Complemental strand, 11346914 - 11346810
Alignment:
Q  46 ctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgctgc 145  Q
    ||||| ||||| |||||||||||||||||||||||  ||||||||||  ||||| |||||| | ||   ||||||||||||  |||||||| |||||| |    
T  11346914 ctaatgacgatcttctggcggaatcaaacttttgatgatatcttcagttgatctaagcaacttcactcgcatatcgatccactggaacatgctgtgctcc 11346815  T
Q  146 caaaa 150  Q
    |||||    
T  11346814 caaaa 11346810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 46 - 150
Target Start/End: Original strand, 19036676 - 19036780
Alignment:
Q  46 ctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgctgc 145  Q
    ||||| ||||| || ||||||||||||||||||||  ||||||||||  ||||| |||||| | ||   ||||||||||||  ||||||||||||||| |    
T  19036676 ctaatgacgatcttgtggcggaatcaaacttttgatgatatcttcagttgatctaagcaacttcacccgcatatcgatccactggaacatgttgtgctcc 19036775  T
Q  146 caaaa 150  Q
    |||||    
T  19036776 caaaa 19036780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 43 - 150
Target Start/End: Complemental strand, 1694997 - 1694890
Alignment:
Q  43 tacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgc 142  Q
    |||||||| ||||| |||||||||||||||||||||||  ||||||||||  ||||||| |||||| ||   ||||||| ||||  | |||||| |||||    
T  1694997 tacctaatgacgatcttctggcggaatcaaacttttgatgatatcttcagttgatctcaacaacgtcacccgcatatcgttccagtgaaacatgctgtgc 1694898  T
Q  143 tgccaaaa 150  Q
    | ||||||    
T  1694897 tcccaaaa 1694890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 60 - 150
Target Start/End: Complemental strand, 18308451 - 18308361
Alignment:
Q  60 ctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgctgccaaaa 150  Q
    |||||||||||||| ||||||  ||||||||||  |||||||||||| | ||   ||||||||||||  ||||||||||||||| ||||||    
T  18308451 ctggcggaatcaaatttttgatgatatcttcagttgatctcagcaacatcacccgcatatcgatccactggaacatgttgtgctcccaaaa 18308361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 46 - 143
Target Start/End: Complemental strand, 3601546 - 3601449
Alignment:
Q  46 ctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgct 143  Q
    ||||| ||||| ||||| |||||||||||||||||  ||||||||||  |||||||||||||| ||   ||||||||  ||  |||||||||||||||    
T  3601546 ctaatgacgatcttctgacggaatcaaacttttgatgatatcttcagttgatctcagcaacgtcacccgcatatcgaaacactggaacatgttgtgct 3601449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 58 - 150
Target Start/End: Complemental strand, 1971558 - 1971466
Alignment:
Q  58 ttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgctgccaaaa 150  Q
    ||||||||||||||| || ||||  ||||||||||  |||||||||||||| ||   ||||| ||||||  ||||||||||||||| ||||||    
T  1971558 ttctggcggaatcaagctgttgatgatatcttcagttgatctcagcaacgttacccgcatattgatccactggaacatgttgtgctcccaaaa 1971466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 58 - 150
Target Start/End: Original strand, 27661391 - 27661483
Alignment:
Q  58 ttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgctgccaaaa 150  Q
    |||||||||||||||||||||||  ||||||| ||  ||||| |||||| | ||   ||||||||||||  ||||||||||||||| ||||||    
T  27661391 ttctggcggaatcaaacttttgatgatatctttagttgatctaagcaacttcacccgcatatcgatccactggaacatgttgtgctcccaaaa 27661483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 46 - 150
Target Start/End: Complemental strand, 28881196 - 28881092
Alignment:
Q  46 ctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgctgc 145  Q
    ||||| ||||| || ||||||||||||||||||||  ||||||||||  ||||| |||||| | ||   ||||||||||||  |||||||| |||||| |    
T  28881196 ctaatgacgatcttgtggcggaatcaaacttttgatgatatcttcagttgatctaagcaacttcacccgcatatcgatccactggaacatgctgtgctcc 28881097  T
Q  146 caaaa 150  Q
    |||||    
T  28881096 caaaa 28881092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 42 - 105
Target Start/End: Complemental strand, 12742881 - 12742818
Alignment:
Q  42 ctacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaa 105  Q
    ||||||||||||||| |||||||||||||| ||| ||||  ||||||||||  |||||||||||    
T  12742881 ctacctaatcacgatcttctggcggaatcagactgttgatgatatcttcagttgatctcagcaa 12742818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 64
Target Start/End: Original strand, 22858268 - 22858315
Alignment:
Q  17 ataaagacactacataataatgatgctacctaatcacgatgttctggc 64  Q
    ||||||||| |||||||||||||||||||||||||| ||| |||||||    
T  22858268 ataaagacaatacataataatgatgctacctaatcatgatcttctggc 22858315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 77 - 150
Target Start/End: Complemental strand, 2599393 - 2599320
Alignment:
Q  77 ttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgctgccaaaa 150  Q
    ||||||||||| ||||   ||||||||||||| ||| |||||||||||||  | ||||||||||||| ||||||    
T  2599393 ttgagaatatcatcagttaatctcagcaacgttacacacatatcgatccacggtaacatgttgtgctcccaaaa 2599320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 46 - 150
Target Start/End: Complemental strand, 11027982 - 11027878
Alignment:
Q  46 ctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgctgc 145  Q
    ||||| ||||| |||||||||||||||||||| ||  ||||||||||  ||||| | |||| | ||   ||||||||||||  |||||||| |||||| |    
T  11027982 ctaatgacgatcttctggcggaatcaaactttcgatgatatcttcagttgatctaaccaacttcacccgcatatcgatccactggaacatgctgtgctcc 11027883  T
Q  146 caaaa 150  Q
    |||||    
T  11027882 caaaa 11027878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 46 - 150
Target Start/End: Complemental strand, 19400568 - 19400464
Alignment:
Q  46 ctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgctgc 145  Q
    ||||| ||||| |||||||||||||||  | ||||  ||||||||||  ||||||| |||||| ||   ||||||||||||  |||||||| |||||| |    
T  19400568 ctaatgacgatattctggcggaatcaagttgttgatgatatcttcagttgatctcaccaacgtcacccgcatatcgatccactggaacatgctgtgctcc 19400469  T
Q  146 caaaa 150  Q
    |||||    
T  19400468 caaaa 19400464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 46 - 150
Target Start/End: Complemental strand, 30709803 - 30709699
Alignment:
Q  46 ctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgctgc 145  Q
    ||||| ||||| ||| |||||||||||||||||||  ||||||||||  ||||| | |||| | ||   ||||||||||||  |||||||| |||||| |    
T  30709803 ctaatgacgatcttccggcggaatcaaacttttgatgatatcttcagttgatctaaccaacttcacccgcatatcgatccactggaacatgctgtgctcc 30709704  T
Q  146 caaaa 150  Q
    |||||    
T  30709703 caaaa 30709699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 150
Target Start/End: Complemental strand, 38854351 - 38854259
Alignment:
Q  58 ttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgctgccaaaa 150  Q
    |||||||||||||||||||||||  ||||||||||  ||||| | |||| | ||   ||||||||||||  |||||||| |||||| ||||||    
T  38854351 ttctggcggaatcaaacttttgatgatatcttcagttgatctaaccaacttcacccgcatatcgatccactggaacatgatgtgctcccaaaa 38854259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 106
Target Start/End: Original strand, 6793385 - 6793448
Alignment:
Q  43 tacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaac 106  Q
    |||||||| ||||| ||||||| |||||||||||||||  |||||||||   ||||||||||||    
T  6793385 tacctaatgacgatcttctggctgaatcaaacttttgatgatatcttcaattgatctcagcaac 6793448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 92
Target Start/End: Complemental strand, 31488217 - 31488142
Alignment:
Q  17 ataaagacactacataataatgatgctacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcag 92  Q
    ||||||||| || |||||||| ||||||||||| ||  || ||||||  |||||||||| || |||||||||||||    
T  31488217 ataaagacattaaataataatcatgctacctaaacataatcttctggtagaatcaaactcttaagaatatcttcag 31488142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 136
Target Start/End: Complemental strand, 7082426 - 7082336
Alignment:
Q  46 ctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatg 136  Q
    ||||| ||||| |||||||||||||||  | ||||  ||||||||||  |||||||||||||| ||   ||||||||||||  ||||||||    
T  7082426 ctaatgacgatcttctggcggaatcaagttgttgatgatatcttcagttgatctcagcaacgtcacccgcatatcgatccactggaacatg 7082336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 150
Target Start/End: Original strand, 541637 - 541741
Alignment:
Q  46 ctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgctgc 145  Q
    ||||| ||||| |||||||| ||||||  | ||||  |||||| |||  |||||||||||||| ||   ||||||||||||  |||||||| |||||| |    
T  541637 ctaatgacgatcttctggcgaaatcaagttgttgatgatatctccagttgatctcagcaacgtcacccgcatatcgatccactggaacatgatgtgctcc 541736  T
Q  146 caaaa 150  Q
    |||||    
T  541737 caaaa 541741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 150
Target Start/End: Original strand, 17366738 - 17366842
Alignment:
Q  46 ctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgctgc 145  Q
    ||||||||||| ||||||| |||||| ||| |||| |||||||| ||  ||||||| |||||  ||   |||||| |||||   |||||||||||||| |    
T  17366738 ctaatcacgatattctggcagaatcagactcttgataatatctttagttgatctcaacaacggtacccgcatatcaatccactagaacatgttgtgctcc 17366837  T
Q  146 caaaa 150  Q
    |||||    
T  17366838 caaaa 17366842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 150
Target Start/End: Complemental strand, 40009733 - 40009629
Alignment:
Q  46 ctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgctgc 145  Q
    ||||| ||||| |||| | |||||||| || ||||  || |||||||  ||||||| |||||| ||  |||||||||||||  | ||||||||||||| |    
T  40009733 ctaatgacgatcttcttgtggaatcaagctgttgatgatgtcttcagttgatctcaacaacgttacccacatatcgatccactgtaacatgttgtgctcc 40009634  T
Q  146 caaaa 150  Q
    |||||    
T  40009633 caaaa 40009629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 112; Significance: 9e-57; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 42 - 197
Target Start/End: Original strand, 27650419 - 27650574
Alignment:
Q  42 ctacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtg 141  Q
    ||||||||||||||| |||||||||||||||||| ||||||||||||||||  ||||||||||||||||||||||||||||||||  | |||||||||||    
T  27650419 ctacctaatcacgatcttctggcggaatcaaactgttgagaatatcttcagttgatctcagcaacgtgacaaacatatcgatccacggtaacatgttgtg 27650518  T
Q  142 ctgccaaaaaatcgagaacatgctcctcacatcgtcgtcgttctttaattctagcc 197  Q
     ||||||||||||||||||||||||||||  |||||||||||||||| ||||||||    
T  27650519 ttgccaaaaaatcgagaacatgctcctcaggtcgtcgtcgttctttagttctagcc 27650574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 42 - 200
Target Start/End: Original strand, 31991928 - 31992086
Alignment:
Q  42 ctacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtg 141  Q
    ||||||||||||||| |||||||||||||||| | ||||||||||||||||  |||||| ||||||||||||||||||||||  |  | | |||| | ||    
T  31991928 ctacctaatcacgatcttctggcggaatcaaattgttgagaatatcttcagttgatctctgcaacgtgacaaacatatcgataaacggaaccatgctatg 31992027  T
Q  142 ctgccaaaaaatcgagaacatgctcctcacatcgtcgtcgttctttaattctagccgac 200  Q
    || ||||||||| ||||||||||||||||| |||| |||||||||||||||||||||||    
T  31992028 cttccaaaaaattgagaacatgctcctcacgtcgttgtcgttctttaattctagccgac 31992086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 16 - 196
Target Start/End: Original strand, 11679054 - 11679235
Alignment:
Q  16 tataaagacactacataataatgatgctacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaac 115  Q
    |||||||||| ||||||||||||||| || |||||||  || || |||| |||||||||| ||||||||||||||||  ||||| || ||||||| ||||    
T  11679054 tataaagacagtacataataatgatggtatctaatcataatcttatggcagaatcaaactgttgagaatatcttcagttgatctaagtaacgtgagaaac 11679153  T
Q  116 atatcgatccataggaacatgttgtgctgc-caaaaaatcgagaacatgctcctcacatcgtcgtcgttctttaattctagc 196  Q
    |||||||||||  |||||||| |||| |||  ||||||||||||||||| || |||| ||||||||||||||||||||||||    
T  11679154 atatcgatccacgggaacatgatgtggtgcaaaaaaaatcgagaacatgttcatcacgtcgtcgtcgttctttaattctagc 11679235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 57 - 189
Target Start/End: Original strand, 26617484 - 26617616
Alignment:
Q  57 gttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgctgccaaaaaatcga 156  Q
    ||||| ||||||||||||| || ||||||||||||| |||||||||||||||||||||||||||||||||  || |||||||||| || |||||||||||    
T  26617484 gttctagcggaatcaaactcttaagaatatcttcaggcgatctcagcaacgtgacaaacatatcgatccacggggacatgttgtgttgacaaaaaatcga 26617583  T
Q  157 gaacatgctcctcacatcgtcgtcgttctttaa 189  Q
    |||||||||||| |||||||| |||||| ||||    
T  26617584 gaacatgctcctaacatcgtcatcgttcgttaa 26617616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 27 - 199
Target Start/End: Complemental strand, 11718984 - 11718811
Alignment:
Q  27 tacataataatgatgctacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatcca 126  Q
    ||||||||||||||| ||||||||||  || ||   || |||||||||| ||||||||||||||||  |||||||| ||||||| |||||||||||||||    
T  11718984 tacataataatgatggtacctaatcataatcttacagcagaatcaaactgttgagaatatcttcagttgatctcagtaacgtgagaaacatatcgatcca 11718885  T
Q  127 taggaacatgttgtgctgc-caaaaaatcgagaacatgctcctcacatcgtcgtcgttctttaattctagccga 199  Q
      |||||||| |||| |||  ||||||||||||||||| || |||| |||||||||||||||||||||||||||    
T  11718884 cgggaacatgatgtggtgcaaaaaaaatcgagaacatgttcatcacgtcgtcgtcgttctttaattctagccga 11718811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 27 - 200
Target Start/End: Complemental strand, 18878733 - 18878569
Alignment:
Q  27 tacataataatgatgctacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatcca 126  Q
    |||||||||||||||||||||||| |  || ||||| |||||||||| | |||||||||||||||| |||||||||||||||||||||||||| ||||||    
T  18878733 tacataataatgatgctacctaatgataatcttctgtcggaatcaaattgttgagaatatcttcaggcgatctcagcaacgtgacaaacatattgatcca 18878634  T
Q  127 taggaacatgttgtgctgccaaaaaatcgagaacatgctcctcacatcgtcgtcgttctttaattctagccgac 200  Q
     ||         |||| ||||||||||| |||||||||||||||| |||||||||||| |||||||||| ||||    
T  18878633 cag---------gtgcagccaaaaaatcaagaacatgctcctcacgtcgtcgtcgttcgttaattctagtcgac 18878569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 42 - 200
Target Start/End: Original strand, 15891639 - 15891797
Alignment:
Q  42 ctacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaa-catgttgt 140  Q
    ||||||||||||||| |||| ||||||||||||| ||||||||||||||||  |||||| |||||||||||||||||||||| ||  |||| |||| ||     
T  15891639 ctacctaatcacgatattctagcggaatcaaactgttgagaatatcttcagttgatctccgcaacgtgacaaacatatcgat-caccggaaccatgctgc 15891737  T
Q  141 gctgccaaaaaatcgagaacatgctcctcacatcgtcgtcgttctttaattctagccgac 200  Q
    |||||||||||||| |||||||||| || || |||| ||| |||||||||||||||||||    
T  15891738 gctgccaaaaaatcaagaacatgcttctgacgtcgttgtcattctttaattctagccgac 15891797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 42 - 199
Target Start/End: Original strand, 18036154 - 18036308
Alignment:
Q  42 ctacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtg 141  Q
    ||||||||||||||| |||||||||||||||| | |||||||||| || ||  |||||| |||||||||||||||||| |||  |  |   |||||||||    
T  18036154 ctacctaatcacgatcttctggcggaatcaaattgttgagaatatttttagttgatctctgcaacgtgacaaacatattgataaacggagccatgttgtg 18036253  T
Q  142 ctgccaaaaaatcgagaacatgctcctcacatcgtcgtcgttctttaattctagccga 199  Q
    ||||||||||||| |||||||||||||||||||||||||   ||||||||||||||||    
T  18036254 ctgccaaaaaatcaagaacatgctcctcacatcgtcgtc---ctttaattctagccga 18036308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 43 - 150
Target Start/End: Complemental strand, 35491848 - 35491741
Alignment:
Q  43 tacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgc 142  Q
    |||||||| ||||| |||||||||||||||||||||||  ||||||||||  |||||||||||||| ||   ||||||||||||  ||||||||||||||    
T  35491848 tacctaatgacgatcttctggcggaatcaaacttttgatgatatcttcagttgatctcagcaacgtcacccgcatatcgatccactggaacatgttgtgc 35491749  T
Q  143 tgccaaaa 150  Q
    | ||||||    
T  35491748 tcccaaaa 35491741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 8 - 108
Target Start/End: Original strand, 28746922 - 28747022
Alignment:
Q  8 tccaagaatataaagacactacataataatgatgctacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacg 107  Q
    ||||| || |||||||||| ||||||||||||||||||| || ||  || ||||||| |||||||||| |||||||||| ||||| ||||||||||||||    
T  28746922 tccaacaaaataaagacaccacataataatgatgctaccgaaacataattttctggcagaatcaaactgttgagaatattttcaggcgatctcagcaacg 28747021  T
Q  108 t 108  Q
    |    
T  28747022 t 28747022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 43 - 150
Target Start/End: Original strand, 27130502 - 27130609
Alignment:
Q  43 tacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgc 142  Q
    |||||||| || || |||||||||||||||||||||||  ||||||||||  |||||||||||||| ||   ||||||||||||  ||||||||||||||    
T  27130502 tacctaatgactatcttctggcggaatcaaacttttgatgatatcttcagttgatctcagcaacgtcacccgcatatcgatccactggaacatgttgtgc 27130601  T
Q  143 tgccaaaa 150  Q
    | ||||||    
T  27130602 tcccaaaa 27130609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 43 - 150
Target Start/End: Original strand, 37312488 - 37312595
Alignment:
Q  43 tacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgc 142  Q
    |||||||| ||||| ||||||| |||||||||||||||  ||||||||||  |||||||||||||| ||   ||||||||||||  ||||||||||||||    
T  37312488 tacctaatgacgatcttctggcagaatcaaacttttgatgatatcttcagttgatctcagcaacgtcacccgcatatcgatccactggaacatgttgtgc 37312587  T
Q  143 tgccaaaa 150  Q
    | ||||||    
T  37312588 tcccaaaa 37312595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 43 - 150
Target Start/End: Original strand, 41499087 - 41499194
Alignment:
Q  43 tacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgc 142  Q
    |||||||| ||||| |||||||||||||||||||||||  ||||||||||  |||||||||||||| ||   ||||||||||||  |||||||| |||||    
T  41499087 tacctaatgacgatcttctggcggaatcaaacttttgatgatatcttcagttgatctcagcaacgtcaccctcatatcgatccactggaacatgctgtgc 41499186  T
Q  143 tgccaaaa 150  Q
    | ||||||    
T  41499187 tcccaaaa 41499194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 43 - 150
Target Start/End: Complemental strand, 6977049 - 6976942
Alignment:
Q  43 tacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgc 142  Q
    |||||||| ||||| |||| ||||||||||||||||||  ||||||||||  |||||||||||||| ||   ||||||||||||  |||||||| |||||    
T  6977049 tacctaatgacgatcttctcgcggaatcaaacttttgatgatatcttcagttgatctcagcaacgtcacccgcatatcgatccactggaacatgctgtgc 6976950  T
Q  143 tgccaaaa 150  Q
    | ||||||    
T  6976949 tcccaaaa 6976942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 8 - 106
Target Start/End: Complemental strand, 20988761 - 20988663
Alignment:
Q  8 tccaagaatataaagacactacataataatgatgctacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaac 106  Q
    ||||| || ||||||||| ||||||||||||||||||||||| ||  || |  ||||  |||| |||| ||||||||||||||||||||||||||||||    
T  20988761 tccaacaaaataaagacattacataataatgatgctacctaaacataatttagtggcataatcgaactcttgagaatatcttcagacgatctcagcaac 20988663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 42 - 143
Target Start/End: Complemental strand, 20148332 - 20148231
Alignment:
Q  42 ctacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtg 141  Q
    ||||||||||||||| |||||||||||||| ||| |||| |||||||||||   ||||||||||||| ||   |||||||||| |  |||||||||||||    
T  20148332 ctacctaatcacgatcttctggcggaatcagactgttgaaaatatcttcagctaatctcagcaacgttacccgcatatcgatctactggaacatgttgtg 20148233  T
Q  142 ct 143  Q
    ||    
T  20148232 ct 20148231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 42 - 150
Target Start/End: Original strand, 10364629 - 10364737
Alignment:
Q  42 ctacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtg 141  Q
    |||| |||| ||||| |||||||||||||||||||||||  |||||||||   |||||||||||| | ||   ||||||||||||  |||||||||||||    
T  10364629 ctacgtaatgacgatcttctggcggaatcaaacttttgatgatatcttcaattgatctcagcaacatcacccgcatatcgatccactggaacatgttgtg 10364728  T
Q  142 ctgccaaaa 150  Q
    || ||||||    
T  10364729 ctcccaaaa 10364737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 42 - 150
Target Start/End: Complemental strand, 33404229 - 33404121
Alignment:
Q  42 ctacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtg 141  Q
    ||||||||||||||| ||||||||  |||| ||| |||| |||||||||||  |||||||||||||| ||   ||||||||||||  ||||||| |||||    
T  33404229 ctacctaatcacgatcttctggcgacatcagactgttgataatatcttcagttgatctcagcaacgttacccgcatatcgatccactggaacatcttgtg 33404130  T
Q  142 ctgccaaaa 150  Q
    || ||||||    
T  33404129 ctcccaaaa 33404121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 46 - 150
Target Start/End: Complemental strand, 42120222 - 42120118
Alignment:
Q  46 ctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgctgc 145  Q
    ||||| ||||| ||||||||||||||| || ||||  ||||||||||  |||||||||||||| ||  ||||||| |||||  ||||||||||||||| |    
T  42120222 ctaatgacgatcttctggcggaatcaagctgttgatgatatcttcagttgatctcagcaacgttacccacatatcaatccactggaacatgttgtgctcc 42120123  T
Q  146 caaaa 150  Q
    |||||    
T  42120122 caaaa 42120118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 43 - 150
Target Start/End: Original strand, 19471627 - 19471734
Alignment:
Q  43 tacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgc 142  Q
    |||||||| ||||| |||||||||||||||||||||||  ||||||||||  ||||| |||||||| ||   ||||||||| ||  |||||||| |||||    
T  19471627 tacctaatgacgatcttctggcggaatcaaacttttgatgatatcttcagttgatcttagcaacgtcacccgcatatcgatacactggaacatgctgtgc 19471726  T
Q  143 tgccaaaa 150  Q
    | ||||||    
T  19471727 tcccaaaa 19471734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 42 - 150
Target Start/End: Complemental strand, 6902180 - 6902072
Alignment:
Q  42 ctacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtg 141  Q
    ||||||||||| ||| |||| ||||||||| ||| |||| |||||||||||  ||||||| |||||| ||   ||||||||| ||  |||||||||||||    
T  6902180 ctacctaatcatgatcttctcgcggaatcagactgttgataatatcttcagttgatctcaacaacgttactcgcatatcgattcactggaacatgttgtg 6902081  T
Q  142 ctgccaaaa 150  Q
    || ||||||    
T  6902080 ctcccaaaa 6902072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 46 - 150
Target Start/End: Complemental strand, 29067939 - 29067835
Alignment:
Q  46 ctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgctgc 145  Q
    ||||| ||||| |||||||||||||||||||||||  ||||||||||  ||||| |||||| | ||   ||||||||||||  |||||||| |||||| |    
T  29067939 ctaatgacgatcttctggcggaatcaaacttttgatgatatcttcagttgatctaagcaacttcacccgcatatcgatccactggaacatgctgtgctcc 29067840  T
Q  146 caaaa 150  Q
    |||||    
T  29067839 caaaa 29067835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 43 - 143
Target Start/End: Original strand, 40677368 - 40677468
Alignment:
Q  43 tacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgc 142  Q
    |||||||| ||||| |||| ||||||||||||||||||  ||||||||||  |||||||||||||| ||   ||||||||||||   |||||||| ||||    
T  40677368 tacctaatgacgatcttctagcggaatcaaacttttgatgatatcttcagttgatctcagcaacgtcacccgcatatcgatccactagaacatgtcgtgc 40677467  T
Q  143 t 143  Q
    |    
T  40677468 t 40677468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 43 - 150
Target Start/End: Original strand, 2919358 - 2919465
Alignment:
Q  43 tacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgc 142  Q
    |||||||| ||||| || |||||||||||||||||| |  ||||||||||  |||||||||||||| ||   |||||||||| |  | ||||||||||||    
T  2919358 tacctaatgacgatcttttggcggaatcaaacttttaatgatatcttcagttgatctcagcaacgtcacccgcatatcgatctactgtaacatgttgtgc 2919457  T
Q  143 tgccaaaa 150  Q
    | ||||||    
T  2919458 tcccaaaa 2919465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 43 - 150
Target Start/End: Original strand, 34521677 - 34521784
Alignment:
Q  43 tacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgc 142  Q
    |||||||| ||||| || ||  ||||||||||||||||  ||||||||||  ||||||| |||||| ||   ||||||||||||  ||||||||||||||    
T  34521677 tacctaatgacgatcttatgagggaatcaaacttttgatgatatcttcagttgatctcaacaacgtcacccgcatatcgatccactggaacatgttgtgc 34521776  T
Q  143 tgccaaaa 150  Q
    | ||||||    
T  34521777 tcccaaaa 34521784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 43 - 106
Target Start/End: Complemental strand, 43491663 - 43491600
Alignment:
Q  43 tacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaac 106  Q
    |||||||| ||||| |||||||||||||||||||||||  ||||||||||  ||||||||||||    
T  43491663 tacctaatgacgatcttctggcggaatcaaacttttgatgatatcttcagttgatctcagcaac 43491600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 46 - 143
Target Start/End: Complemental strand, 5420679 - 5420582
Alignment:
Q  46 ctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgct 143  Q
    ||||| ||||| ||| || ||||||||||||||||  ||||||||||  ||| |||||||||| ||   ||||||||||||| |||||||| ||||||    
T  5420679 ctaatgacgatcttcaggtggaatcaaacttttgatgatatcttcagttgatatcagcaacgtcacccgcatatcgatccattggaacatgctgtgct 5420582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 46 - 150
Target Start/End: Original strand, 3937060 - 3937164
Alignment:
Q  46 ctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgctgc 145  Q
    ||||| ||||| || ||||||||||||||||||||  ||||||||||  ||||| |||||| | ||   ||||||||||||  |||||||| |||||| |    
T  3937060 ctaatgacgatcttgtggcggaatcaaacttttgatgatatcttcagttgatctaagcaacttcacccgcatatcgatccactggaacatgctgtgctcc 3937159  T
Q  146 caaaa 150  Q
    |||||    
T  3937160 caaaa 3937164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 46 - 150
Target Start/End: Original strand, 10360195 - 10360299
Alignment:
Q  46 ctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgctgc 145  Q
    ||||| ||||| ||||||||||||||| || ||||  | ||||||||  |||||||||||| | ||   ||||||||||||  ||||||||||||||| |    
T  10360195 ctaatgacgatcttctggcggaatcaagctgttgatgaaatcttcagttgatctcagcaacattacccgcatatcgatccactggaacatgttgtgctcc 10360294  T
Q  146 caaaa 150  Q
    |||||    
T  10360295 caaaa 10360299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 46 - 150
Target Start/End: Original strand, 12968298 - 12968402
Alignment:
Q  46 ctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgctgc 145  Q
    ||||| ||||| |||||| ||||||||  | ||||  ||||||||||  |||||||||||||| ||   ||||||||||||  ||||||||||||||| |    
T  12968298 ctaatgacgatcttctggaggaatcaagttgttgatgatatcttcagttgatctcagcaacgttacccgcatatcgatccaatggaacatgttgtgctcc 12968397  T
Q  146 caaaa 150  Q
    |||||    
T  12968398 caaaa 12968402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 46 - 150
Target Start/End: Complemental strand, 17424999 - 17424895
Alignment:
Q  46 ctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgctgc 145  Q
    ||||| ||||| || ||||||||||||||||||||  ||||||||||  ||||| |||||| | ||   ||||||||||||   |||||||||||||| |    
T  17424999 ctaatgacgatcttgtggcggaatcaaacttttgatgatatcttcagttgatctaagcaacttcacccgcatatcgatccactagaacatgttgtgctcc 17424900  T
Q  146 caaaa 150  Q
    |||||    
T  17424899 caaaa 17424895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 58 - 150
Target Start/End: Complemental strand, 29111356 - 29111264
Alignment:
Q  58 ttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgctgccaaaa 150  Q
    |||||||||||| ||| ||||||  |||||||| |  |||||||||||||| ||   ||||||||||||  ||||||||||||||| ||||||    
T  29111356 ttctggcggaattaaatttttgatgatatcttcggttgatctcagcaacgttacccgcatatcgatccactggaacatgttgtgctcccaaaa 29111264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 46 - 150
Target Start/End: Complemental strand, 43983066 - 43982962
Alignment:
Q  46 ctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgctgc 145  Q
    ||||| ||||| || ||||||||||||||||||||  ||||||||||  ||||| |||||| | ||   ||||||||||||  |||||||| |||||| |    
T  43983066 ctaatgacgatcttgtggcggaatcaaacttttgatgatatcttcagttgatctaagcaacttcacccgcatatcgatccactggaacatgctgtgctcc 43982967  T
Q  146 caaaa 150  Q
    |||||    
T  43982966 caaaa 43982962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 42 - 108
Target Start/End: Complemental strand, 16253669 - 16253603
Alignment:
Q  42 ctacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgt 108  Q
    ||||||||||||||| |||||| ||||||||||| | || |||||||| ||  ||||||||||||||    
T  16253669 ctacctaatcacgatcttctggtggaatcaaactgtcgataatatctttagttgatctcagcaacgt 16253603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 130 - 183
Target Start/End: Original strand, 20529818 - 20529872
Alignment:
Q  130 gaacatgttgtg-ctgccaaaaaatcgagaacatgctcctcacatcgtcgtcgtt 183  Q
    |||||||||||| ||| | ||| ||||||||||||||||||||||||||||||||    
T  20529818 gaacatgttgtggctgaccaaatatcgagaacatgctcctcacatcgtcgtcgtt 20529872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 46 - 150
Target Start/End: Complemental strand, 3941947 - 3941843
Alignment:
Q  46 ctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgctgc 145  Q
    ||||| ||||| |||||||||||||||  | ||||  ||||||||||  ||||||| |||||| ||   ||||||||||||  |||||||| |||||| |    
T  3941947 ctaatgacgatcttctggcggaatcaagttgttgatgatatcttcagttgatctcatcaacgtcacccgcatatcgatccactggaacatgatgtgctcc 3941848  T
Q  146 caaaa 150  Q
    |||||    
T  3941847 caaaa 3941843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 126
Target Start/End: Original strand, 17796099 - 17796183
Alignment:
Q  42 ctacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatcca 126  Q
    ||||||||| ||||  ||||| ||||| |||||||||||  ||||||||||  |||||||||||||| ||   ||||||||||||    
T  17796099 ctacctaatgacgagcttctgacggaaccaaacttttgatgatatcttcagttgatctcagcaacgttacccgcatatcgatcca 17796183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 108
Target Start/End: Complemental strand, 18332804 - 18332704
Alignment:
Q  8 tccaagaatataaagacactacataataatgatgctacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacg 107  Q
    ||||| || |||||||||||||||| |||||||||||| ||| ||  ||  | ||||  ||||||||| || | ||||||||||| |||||||| |||||    
T  18332804 tccaacaaaataaagacactacatagtaatgatgctacataaacataatcatgtggcataatcaaactcttcataatatcttcaggcgatctcaacaacg 18332705  T
Q  108 t 108  Q
    |    
T  18332704 t 18332704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 150
Target Start/End: Complemental strand, 22002032 - 22001940
Alignment:
Q  58 ttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgctgccaaaa 150  Q
    |||||||||||||||||||||||  ||||||| ||  ||||| |||||| | ||   ||||||||||||| |||||||| || ||| ||||||    
T  22002032 ttctggcggaatcaaacttttgatgatatcttaagttgatctaagcaacttcacccgcatatcgatccattggaacatgctgagctcccaaaa 22001940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 46 - 150
Target Start/End: Original strand, 42241095 - 42241199
Alignment:
Q  46 ctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgctgc 145  Q
    ||||| ||||| || |||| ||||||||||||||   ||||||||||  |||||||||||||| ||   |||||||||| |  | ||||||||||||| |    
T  42241095 ctaatgacgatcttatggcagaatcaaacttttggtgatatcttcagttgatctcagcaacgtcacccgcatatcgatcaactgaaacatgttgtgctcc 42241194  T
Q  146 caaaa 150  Q
    |||||    
T  42241195 caaaa 42241199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 150
Target Start/End: Complemental strand, 29906780 - 29906688
Alignment:
Q  58 ttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgctgccaaaa 150  Q
    ||||||| |||||||  | ||||  |||| |||||  |||||||||||||| ||   ||||||||||||  ||||||||||||||| ||||||    
T  29906780 ttctggcagaatcaagttgttgatgatattttcagttgatctcagcaacgttacccgcatatcgatccactggaacatgttgtgctcccaaaa 29906688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 150
Target Start/End: Complemental strand, 39394101 - 39393997
Alignment:
Q  46 ctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgctgc 145  Q
    ||||| ||||| ||||| |||||||||  | || |  ||||||||||  |||||||||||||| ||   ||||||||||||   |||||||||||||| |    
T  39394101 ctaatgacgatcttctgacggaatcaagttgttaatgatatcttcagttgatctcagcaacgtcacccgcatatcgatccactagaacatgttgtgctcc 39394002  T
Q  146 caaaa 150  Q
    |||||    
T  39394001 caaaa 39393997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 109; Significance: 5e-55; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 8 - 180
Target Start/End: Original strand, 18743938 - 18744110
Alignment:
Q  8 tccaagaatataaagacactacataataatgatgctacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacg 107  Q
    |||||||| ||||||||||||||||||||||||| ||| ||||||  || || ||| ||||||||||| | ||||||||||||||||||||||||||||     
T  18743938 tccaagaaaataaagacactacataataatgatgatacataatcataatcttatggaggaatcaaactgtcgagaatatcttcagacgatctcagcaaca 18744037  T
Q  108 tgacaaacatatcgatccataggaacatgttgtgctgccaaaaaatcgagaacatgctcctcacatcgtcgtc 180  Q
    |||||||||||||||||||   ||||||||||||||| |||||||||||||||||| ||||||||||||||||    
T  18744038 tgacaaacatatcgatccacgagaacatgttgtgctgacaaaaaatcgagaacatgttcctcacatcgtcgtc 18744110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 19 - 200
Target Start/End: Complemental strand, 2402432 - 2402256
Alignment:
Q  19 aaagacactacataataatgatgctacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacata 118  Q
    ||||||| ||||||||||||||||||||||||||  || || |||| |||     || |||||| ||||||||| |||||||||||||||||||||||||    
T  2402432 aaagacaatacataataatgatgctacctaatcataatcttatggctgaa-----ctgttgagattatcttcaggcgatctcagcaacgtgacaaacata 2402338  T
Q  119 tcgatccataggaacatgttgtgctgccaaaaaatcgagaacatgctcctcacatcgtcgtcgttctttaattctagccgac 200  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||| |  ||||||||||| |||||||||| ||||    
T  2402337 tcgatccacaggaacatgttgtgctgccaaaaaatcgagaacatgctcctcgcgccgtcgtcgttcgttaattctagtcgac 2402256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 42 - 200
Target Start/End: Original strand, 17465330 - 17465488
Alignment:
Q  42 ctacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtg 141  Q
    ||||||||||||||| || ||||||||||||||| ||||||||||||||||  |||||| |||||||||||||||||||||||||    | |||| | ||    
T  17465330 ctacctaatcacgatcttttggcggaatcaaactgttgagaatatcttcagttgatctctgcaacgtgacaaacatatcgatccacgaaaccatgatctg 17465429  T
Q  142 ctgccaaaaaatcgagaacatgctcctcacatcgtcgtcgttctttaattctagccgac 200  Q
    |||||||||||| ||||||||| || ||||||||||||| |||||||||||||| ||||    
T  17465430 ctgccaaaaaattgagaacatgttcatcacatcgtcgtcattctttaattctagtcgac 17465488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 42 - 200
Target Start/End: Complemental strand, 28051582 - 28051423
Alignment:
Q  42 ctacctaatcacgatgttctggcggaatcaaacttttgagaa-tatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgt 140  Q
    |||| |||||||||| |||| ||||||||||||| ||||||| ||||| |||  |||||| |||||||||||||||||||||||   || | |||| |||    
T  28051582 ctacgtaatcacgatcttctagcggaatcaaactattgagaaatatctccagttgatctctgcaacgtgacaaacatatcgatcaccagaaccatgctgt 28051483  T
Q  141 gctgccaaaaaatcgagaacatgctcctcacatcgtcgtcgttctttaattctagccgac 200  Q
    |||||||||||||||||||||||||||| || | ||||||||||||||||||||||||||    
T  28051482 gctgccaaaaaatcgagaacatgctcctgacgttgtcgtcgttctttaattctagccgac 28051423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 133 - 200
Target Start/End: Original strand, 14482898 - 14482965
Alignment:
Q  133 catgttgtgctgccaaaaaatcgagaacatgctcctcacatcgtcgtcgttctttaattctagccgac 200  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||    
T  14482898 catgttgtgctgccaaaaaatcgagaacatgctcctcacgtcgtcgtctttctttaattctagccgac 14482965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 77 - 199
Target Start/End: Complemental strand, 20192497 - 20192376
Alignment:
Q  77 ttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaac-atgttgtgctgccaaaaaatcgagaacatgctcctcacatcg 175  Q
    ||||||||||||||||  |||||| |||||||||||||||||||||| ||  | ||| ||| ||||||||| |||||| |||||||||||  | || |||    
T  20192497 ttgagaatatcttcagttgatctctgcaacgtgacaaacatatcgat-caccgaaactatgatgtgctgcc-aaaaattgagaacatgcttttgacgtcg 20192400  T
Q  176 tcgtcgttctttaattctagccga 199  Q
    ||||||||||||||||||||||||    
T  20192399 tcgtcgttctttaattctagccga 20192376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 77 - 199
Target Start/End: Original strand, 20242157 - 20242278
Alignment:
Q  77 ttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaac-atgttgtgctgccaaaaaatcgagaacatgctcctcacatcg 175  Q
    ||||||||||||||||  |||||| |||||||||||||||||||||| ||  | ||| ||| ||||||||| |||||| |||||||||||  | || |||    
T  20242157 ttgagaatatcttcagttgatctctgcaacgtgacaaacatatcgat-caccgaaactatgatgtgctgcc-aaaaattgagaacatgcttttgacgtcg 20242254  T
Q  176 tcgtcgttctttaattctagccga 199  Q
    ||||||||||||||||||||||||    
T  20242255 tcgtcgttctttaattctagccga 20242278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 77 - 199
Target Start/End: Original strand, 22136141 - 22136262
Alignment:
Q  77 ttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaac-atgttgtgctgccaaaaaatcgagaacatgctcctcacatcg 175  Q
    ||||||||||||||||  |||||| |||||||||||||||||||||| ||  | ||| ||| ||||||||| |||||| |||||||||||  | || |||    
T  22136141 ttgagaatatcttcagttgatctctgcaacgtgacaaacatatcgat-caccgaaactatgatgtgctgcc-aaaaattgagaacatgcttttgacgtcg 22136238  T
Q  176 tcgtcgttctttaattctagccga 199  Q
    ||||||||||||||||||||||||    
T  22136239 tcgtcgttctttaattctagccga 22136262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 77 - 199
Target Start/End: Original strand, 22143494 - 22143615
Alignment:
Q  77 ttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaac-atgttgtgctgccaaaaaatcgagaacatgctcctcacatcg 175  Q
    ||||||||||||||||  |||||| |||||||||||||||||||||| ||  | ||| ||| ||||||||| |||||| |||||||||||  | || |||    
T  22143494 ttgagaatatcttcagttgatctctgcaacgtgacaaacatatcgat-caccgaaactatgatgtgctgcc-aaaaattgagaacatgcttttgacgtcg 22143591  T
Q  176 tcgtcgttctttaattctagccga 199  Q
    ||||||||||||||||||||||||    
T  22143592 tcgtcgttctttaattctagccga 22143615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 20 - 105
Target Start/End: Original strand, 5973004 - 5973089
Alignment:
Q  20 aagacactacataataatgatgctacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaa 105  Q
    |||||||||||||||||||||||||||||| ||  || || |||  |||||||||| |||||||||||||||| ||||||||||||    
T  5973004 aagacactacataataatgatgctacctaaacataatcttatggtagaatcaaactcttgagaatatcttcaggcgatctcagcaa 5973089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 46 - 150
Target Start/End: Complemental strand, 801375 - 801271
Alignment:
Q  46 ctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgctgc 145  Q
    ||||| ||||| |||||||||||||||||||||||  ||||||||||  |||||||||||||| ||   ||||||||||||  |||||||| |||||| |    
T  801375 ctaatgacgatcttctggcggaatcaaacttttgatgatatcttcagttgatctcagcaacgtcacccgcatatcgatccactggaacatgctgtgctcc 801276  T
Q  146 caaaa 150  Q
    |||||    
T  801275 caaaa 801271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 43 - 150
Target Start/End: Complemental strand, 13402746 - 13402639
Alignment:
Q  43 tacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgc 142  Q
    |||||||| ||||| |||||||||||||||| ||||||  ||||||||||  |||||||||||||| ||   ||||||||||||  ||||||||||| ||    
T  13402746 tacctaatgacgatcttctggcggaatcaaatttttgatgatatcttcagttgatctcagcaacgtcacccgcatatcgatccactggaacatgttgggc 13402647  T
Q  143 tgccaaaa 150  Q
    | ||||||    
T  13402646 tcccaaaa 13402639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 43 - 150
Target Start/End: Original strand, 32027624 - 32027731
Alignment:
Q  43 tacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgc 142  Q
    |||||||| ||||| |||||||||||||||||||||||  ||||||||||  |||||||||||||| ||   |||||| |||||   |||||||||||||    
T  32027624 tacctaatgacgatcttctggcggaatcaaacttttgatgatatcttcagttgatctcagcaacgtcacccgcatatcaatccactagaacatgttgtgc 32027723  T
Q  143 tgccaaaa 150  Q
    | ||||||    
T  32027724 tcccaaaa 32027731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 43 - 150
Target Start/End: Original strand, 32037683 - 32037790
Alignment:
Q  43 tacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgc 142  Q
    |||||||| ||||| |||||||||||||||||||||||  ||||||||||  |||||||||||||| ||   |||||| |||||   |||||||||||||    
T  32037683 tacctaatgacgatcttctggcggaatcaaacttttgatgatatcttcagttgatctcagcaacgtcacccgcatatcaatccactagaacatgttgtgc 32037782  T
Q  143 tgccaaaa 150  Q
    | ||||||    
T  32037783 tcccaaaa 32037790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 8 - 106
Target Start/End: Original strand, 3097475 - 3097573
Alignment:
Q  8 tccaagaatataaagacactacataataatgatgctacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaac 106  Q
    ||||| || ||||||||  |||||| |||||||||||||||| ||  || |||| || |||||||||| |||||||||||||||| |||||||||||||    
T  3097475 tccaacaaaataaagactgtacatattaatgatgctacctaaacataattttctagcagaatcaaactgttgagaatatcttcaggcgatctcagcaac 3097573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 17 - 107
Target Start/End: Complemental strand, 14095875 - 14095785
Alignment:
Q  17 ataaagacactacataataatgatgctacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacg 107  Q
    ||||||||| ||||||||||||||||||||||| ||  || || ||||  ||||||||| |||||||||||| ||| ||||||||||||||    
T  14095875 ataaagacattacataataatgatgctacctaaacataatcttgtggcataatcaaactcttgagaatatctacaggcgatctcagcaacg 14095785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 138 - 195
Target Start/End: Complemental strand, 33719187 - 33719130
Alignment:
Q  138 tgtgctgccaaaaaatcgagaacatgctcctcacatcgtcgtcgttctttaattctag 195  Q
    |||||||||||||||||||||| ||||| ||||| |||||||||||||||||||||||    
T  33719187 tgtgctgccaaaaaatcgagaatatgcttctcacgtcgtcgtcgttctttaattctag 33719130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 43 - 150
Target Start/End: Original strand, 30257575 - 30257682
Alignment:
Q  43 tacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgc 142  Q
    |||||||| ||||| |||| ||||||||||||||||||  |||||||||   |||||||||||||| ||  |||||||||||||   ||||||| |||||    
T  30257575 tacctaatgacgatcttctagcggaatcaaacttttgatgatatcttcaattgatctcagcaacgtcacccacatatcgatccactagaacatgatgtgc 30257674  T
Q  143 tgccaaaa 150  Q
    | ||||||    
T  30257675 tcccaaaa 30257682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 20 - 105
Target Start/End: Complemental strand, 8711118 - 8711033
Alignment:
Q  20 aagacactacataataatgatgctacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaa 105  Q
    |||||||||||||||||||||||||||||| ||  || || |||  |||||||||| ||||||||||||| || | ||||||||||    
T  8711118 aagacactacataataatgatgctacctaaacataatcttatggtagaatcaaactcttgagaatatctttaggcaatctcagcaa 8711033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 46 - 150
Target Start/End: Complemental strand, 11692661 - 11692557
Alignment:
Q  46 ctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgctgc 145  Q
    ||||| ||||| || ||||||||||||||||||||  ||||||||||  ||||| |||||| | ||   ||||||||||||  ||||||||||||||| |    
T  11692661 ctaatgacgatcttgtggcggaatcaaacttttgatgatatcttcagttgatctaagcaacttcacccgcatatcgatccactggaacatgttgtgcttc 11692562  T
Q  146 caaaa 150  Q
    |||||    
T  11692561 caaaa 11692557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 42 - 119
Target Start/End: Complemental strand, 34134865 - 34134788
Alignment:
Q  42 ctacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatat 119  Q
    ||||||||||||||| || | ||||||||||||| |||||||| |||||||  |||||| ||||| ||||| ||||||    
T  34134865 ctacctaatcacgatcttttagcggaatcaaactgttgagaatttcttcagttgatctctgcaacatgacagacatat 34134788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 46 - 150
Target Start/End: Complemental strand, 6205694 - 6205590
Alignment:
Q  46 ctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgctgc 145  Q
    ||||| ||||| || ||||||||||||||||||||  ||||||||||  ||||| |||||| | ||   ||||||||||||  |||||||| |||||| |    
T  6205694 ctaatgacgatcttgtggcggaatcaaacttttgatgatatcttcagttgatctaagcaacttcacccgcatatcgatccactggaacatgctgtgctcc 6205595  T
Q  146 caaaa 150  Q
    |||||    
T  6205594 caaaa 6205590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 46 - 150
Target Start/End: Complemental strand, 27640390 - 27640286
Alignment:
Q  46 ctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgctgc 145  Q
    ||||| ||||| || ||||||||||||||||||||  ||||||||||  ||||| |||||| | ||   ||||||||||||  |||||||| |||||| |    
T  27640390 ctaatgacgatcttgtggcggaatcaaacttttgatgatatcttcagttgatctaagcaacttcacccgcatatcgatccactggaacatgctgtgcttc 27640291  T
Q  146 caaaa 150  Q
    |||||    
T  27640290 caaaa 27640286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 46 - 150
Target Start/End: Complemental strand, 29108350 - 29108246
Alignment:
Q  46 ctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgctgc 145  Q
    ||||| ||||| |||||||||||||||  | ||||  ||||||||||  |||||||||||||| ||   ||||||||||||  |||||||| |||||| |    
T  29108350 ctaatgacgatcttctggcggaatcaagttgttgatcatatcttcagttgatctcagcaacgtcacccgcatatcgatccactggaacatgctgtgctcc 29108251  T
Q  146 caaaa 150  Q
    |||||    
T  29108250 caaaa 29108246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 43 - 143
Target Start/End: Original strand, 34802892 - 34802992
Alignment:
Q  43 tacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgc 142  Q
    |||||||| ||||| || ||||| ||||||||||||||  ||||||||||  |||||||||||||| ||   |||||||||  |  ||||||||||||||    
T  34802892 tacctaatgacgatcttttggcgaaatcaaacttttgatgatatcttcagttgatctcagcaacgtcacccgcatatcgatttactggaacatgttgtgc 34802991  T
Q  143 t 143  Q
    |    
T  34802992 t 34802992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 150
Target Start/End: Complemental strand, 12396989 - 12396882
Alignment:
Q  43 tacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgc 142  Q
    |||||||| ||||| || ||||||||||||  | ||||  ||||||||||  |||||||||||||| ||   ||||||||||||  |||||||| |||||    
T  12396989 tacctaatgacgatcttttggcggaatcaagttgttgatgatatcttcagtagatctcagcaacgttacccgcatatcgatccactggaacatgctgtgc 12396890  T
Q  143 tgccaaaa 150  Q
    | ||||||    
T  12396889 tcccaaaa 12396882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 42 - 143
Target Start/End: Complemental strand, 14115251 - 14115150
Alignment:
Q  42 ctacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtg 141  Q
    |||||||||||| || ||||||| |||||| ||| ||||  ||||||||||  ||||||| |||||| ||   ||||| ||||||  |||||||||||||    
T  14115251 ctacctaatcactatcttctggcagaatcagactcttgatgatatcttcagttgatctcaacaacgttacccgcatattgatccactggaacatgttgtg 14115152  T
Q  142 ct 143  Q
    ||    
T  14115151 ct 14115150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 145 - 205
Target Start/End: Complemental strand, 34132702 - 34132642
Alignment:
Q  145 ccaaaaaatcgagaacatgctcctcacatcgtcgtcgttctttaattctagccgacgaaac 205  Q
    ||||||||| ||||||||||| ||||| || ||||||||||| ||||||||| ||| ||||    
T  34132702 ccaaaaaattgagaacatgcttctcacgtcatcgtcgttcttcaattctagcagacaaaac 34132642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 49
Target Start/End: Complemental strand, 24560059 - 24560018
Alignment:
Q  8 tccaagaatataaagacactacataataatgatgctacctaa 49  Q
    ||||| || ||||||||||| |||||||||||||||||||||    
T  24560059 tccaacaaaataaagacactgcataataatgatgctacctaa 24560018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 47 - 92
Target Start/End: Original strand, 35021237 - 35021282
Alignment:
Q  47 taatcacgatgttctggcggaatcaaacttttgagaatatcttcag 92  Q
    |||| ||||| |||||||||||||||||||||||  ||||||||||    
T  35021237 taatgacgatcttctggcggaatcaaacttttgatgatatcttcag 35021282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 92
Target Start/End: Original strand, 21864877 - 21864941
Alignment:
Q  28 acataataatgatgctacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcag 92  Q
    |||||||||||||||||||||| ||  || |||| || |||||||| | |||||||||| |||||    
T  21864877 acataataatgatgctacctaaacataattttctagcagaatcaaattgttgagaatatattcag 21864941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 150
Target Start/End: Complemental strand, 29066763 - 29066659
Alignment:
Q  46 ctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgctgc 145  Q
    ||||| ||||| | |||||||||||||  | ||||  ||||||||||  |||||||||||| | ||   ||||||||||||  |||||||| |||||| |    
T  29066763 ctaatgacgatctactggcggaatcaagttgttgatcatatcttcagttgatctcagcaacatcacccgcatatcgatccactggaacatgctgtgctcc 29066664  T
Q  146 caaaa 150  Q
    |||||    
T  29066663 caaaa 29066659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 150
Target Start/End: Complemental strand, 29075776 - 29075672
Alignment:
Q  46 ctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgctgc 145  Q
    ||||| ||||| | |||||||||||||  | ||||  ||||||||||  |||||||||||| | ||   ||||||||||||  |||||||| |||||| |    
T  29075776 ctaatgacgatctgctggcggaatcaagttgttgatcatatcttcagttgatctcagcaacatcacccgcatatcgatccactggaacatgctgtgctcc 29075677  T
Q  146 caaaa 150  Q
    |||||    
T  29075676 caaaa 29075672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 150
Target Start/End: Complemental strand, 29110748 - 29110644
Alignment:
Q  46 ctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgctgc 145  Q
    ||||| ||||| | |||||||||||||  | ||||  ||||||||||  |||||||||||| | ||   ||||||||||||  |||||||| |||||| |    
T  29110748 ctaatgacgatctgctggcggaatcaagttgttgatcatatcttcagttgatctcagcaacatcacccgcatatcgatccactggaacatgctgtgctcc 29110649  T
Q  146 caaaa 150  Q
    |||||    
T  29110648 caaaa 29110644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 105; Significance: 1e-52; HSPs: 56)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 8 - 200
Target Start/End: Original strand, 20759098 - 20759290
Alignment:
Q  8 tccaagaatataaagacactacataataatgatgctacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacg 107  Q
    ||||| || |||||||||||| || |||||||| |||||||||||  || |||||| ||||||||| | |||||||||||||||| |||| |||||||||    
T  20759098 tccaacaaaataaagacactagattataatgatactacctaatcataatcttctggtggaatcaaattgttgagaatatcttcaggcgatatcagcaacg 20759197  T
Q  108 tgacaaacatatcgatccataggaacatgttgtgctgccaaaaaatcgagaacatgctcctcacatcgtcgtcgttctttaattctagccgac 200  Q
    |||||||||||||||||||   ||||||||| |||||||||||||||||||||||||||| ||| ||| |||||||| |||| ||||||||||    
T  20759198 tgacaaacatatcgatccacgcgaacatgttatgctgccaaaaaatcgagaacatgctccccacgtcgccgtcgttcgttaactctagccgac 20759290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 8 - 200
Target Start/End: Original strand, 20765489 - 20765681
Alignment:
Q  8 tccaagaatataaagacactacataataatgatgctacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacg 107  Q
    ||||| || |||||||||||| || |||||||| |||||||||||  || |||||| ||||||||| | |||||||||||||||| |||| |||||||||    
T  20765489 tccaacaaaataaagacactagattataatgatactacctaatcataatcttctggtggaatcaaattgttgagaatatcttcaggcgatatcagcaacg 20765588  T
Q  108 tgacaaacatatcgatccataggaacatgttgtgctgccaaaaaatcgagaacatgctcctcacatcgtcgtcgttctttaattctagccgac 200  Q
    |||||||||||||||||||   ||||||||| |||||||||||||||||||||||||||| ||| ||| |||||||| |||| ||||||||||    
T  20765589 tgacaaacatatcgatccacgcgaacatgttatgctgccaaaaaatcgagaacatgctccccacgtcgccgtcgttcgttaactctagccgac 20765681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 42 - 196
Target Start/End: Original strand, 23124522 - 23124676
Alignment:
Q  42 ctacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtg 141  Q
    |||||||||||| || |||||||| ||||||| | ||||||||||||| |  |||||||||||||||||||||||||||||||||   ||||||||||||    
T  23124522 ctacctaatcacaatcttctggcgaaatcaaattgttgagaatatctttaagcgatctcagcaacgtgacaaacatatcgatccacgagaacatgttgtg 23124621  T
Q  142 ctgccaaaaaatcgagaacatgctcctcacatcgtcgtcgttctttaattctagc 196  Q
    || ||||||||| ||||||||||||||||  |||| |||||||||||||| ||||    
T  23124622 ctaccaaaaaatggagaacatgctcctcatgtcgttgtcgttctttaattatagc 23124676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 42 - 200
Target Start/End: Complemental strand, 17292172 - 17292014
Alignment:
Q  42 ctacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtg 141  Q
    |||| |||||||||| |||||||||||||||||| ||||||||||||||||  |||||| ||||||||||||||||||||||  |  | | |||| ||||    
T  17292172 ctacataatcacgatcttctggcggaatcaaactgttgagaatatcttcagttgatctctgcaacgtgacaaacatatcgataaacggaaccatgatgtg 17292073  T
Q  142 ctgccaaaaaatcgagaacatgctcctcacatcgtcgtcgttctttaattctagccgac 200  Q
    |||| ||||| || |||||||| ||||||| ||||||| ||||||||||||||||||||    
T  17292072 ctgctaaaaattcaagaacatgatcctcacgtcgtcgttgttctttaattctagccgac 17292014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 42 - 150
Target Start/End: Complemental strand, 13866473 - 13866365
Alignment:
Q  42 ctacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtg 141  Q
    ||||||||||||| | |||||||||||||||||| ||||||||||||||||  |||||||||||||| ||| ||||||| |||||  | |||||||||||    
T  13866473 ctacctaatcacggtcttctggcggaatcaaactgttgagaatatcttcagttgatctcagcaacgttacatacatatcaatccacggtaacatgttgtg 13866374  T
Q  142 ctgccaaaa 150  Q
    || ||||||    
T  13866373 ctcccaaaa 13866365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 43 - 153
Target Start/End: Original strand, 34529794 - 34529904
Alignment:
Q  43 tacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgc 142  Q
    |||||||| ||||| |||||||||||||||||||||||  ||||||||||  |||||||||||||| ||   ||||||||||||  ||||||||||||||    
T  34529794 tacctaatgacgatcttctggcggaatcaaacttttgatgatatcttcagttgatctcagcaacgtcacctgcatatcgatccactggaacatgttgtgc 34529893  T
Q  143 tgccaaaaaat 153  Q
    | |||||||||    
T  34529894 tcccaaaaaat 34529904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 42 - 150
Target Start/End: Complemental strand, 13850959 - 13850851
Alignment:
Q  42 ctacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtg 141  Q
    ||||||||||||| | |||||||||||||||||| ||||||||||||| ||  ||||||||||| || ||| |||||||||||||  | |||||||||||    
T  13850959 ctacctaatcacggtcttctggcggaatcaaactgttgagaatatctttagttgatctcagcaatgttacatacatatcgatccacggtaacatgttgtg 13850860  T
Q  142 ctgccaaaa 150  Q
    || ||||||    
T  13850859 ctcccaaaa 13850851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 46 - 150
Target Start/End: Original strand, 14330695 - 14330799
Alignment:
Q  46 ctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgctgc 145  Q
    ||||| ||||| |||||||||||||||||||||||  ||||||||||  |||||||||||||| ||   ||||||||||||| ||||||||||||||| |    
T  14330695 ctaatgacgatcttctggcggaatcaaacttttgatgatatcttcagttgatctcagcaacgttacccgcatatcgatccattggaacatgttgtgctcc 14330794  T
Q  146 caaaa 150  Q
    |||||    
T  14330795 caaaa 14330799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 42 - 150
Target Start/End: Complemental strand, 3393514 - 3393406
Alignment:
Q  42 ctacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtg 141  Q
    ||||||||||| ||| |||||||||||||| ||| |||| |||||||||||  |||||||||||||| |||  ||||||||||||   ||||||||||||    
T  3393514 ctacctaatcatgatcttctggcggaatcagactgttgataatatcttcagttgatctcagcaacgttacatgcatatcgatccactagaacatgttgtg 3393415  T
Q  142 ctgccaaaa 150  Q
    || ||||||    
T  3393414 ctcccaaaa 3393406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 42 - 150
Target Start/End: Complemental strand, 17211476 - 17211368
Alignment:
Q  42 ctacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtg 141  Q
    ||||||||||||||| |||||||||||||| ||| |||| |||||||| ||  |||||||||||||| ||   ||||||||||||  |||||||||||||    
T  17211476 ctacctaatcacgatcttctggcggaatcagactgttgataatatctttagttgatctcagcaacgttacccgcatatcgatccactggaacatgttgtg 17211377  T
Q  142 ctgccaaaa 150  Q
    || ||||||    
T  17211376 ctcccaaaa 17211368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 42 - 150
Target Start/End: Original strand, 20778866 - 20778974
Alignment:
Q  42 ctacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtg 141  Q
    ||||||||| ||||| || ||||||||||||||||||||  ||||||||||  |||||||||||||  ||   ||||||||||||| |||||||||||||    
T  20778866 ctacctaatgacgatcttttggcggaatcaaacttttgatgatatcttcagttgatctcagcaacgaaacccgcatatcgatccattggaacatgttgtg 20778965  T
Q  142 ctgccaaaa 150  Q
    || ||||||    
T  20778966 ctcccaaaa 20778974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 43 - 150
Target Start/End: Complemental strand, 22437120 - 22437013
Alignment:
Q  43 tacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgc 142  Q
    |||||||| ||||| ||| |||||||||||||||||||  ||||||||||  |||||||||||||| ||   ||||||||||||  ||||||||||||||    
T  22437120 tacctaatgacgatcttccggcggaatcaaacttttgatgatatcttcagttgatctcagcaacgtcacccgcatatcgatccactggaacatgttgtgc 22437021  T
Q  143 tgccaaaa 150  Q
    | ||||||    
T  22437020 tcccaaaa 22437013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 43 - 150
Target Start/End: Original strand, 47657353 - 47657460
Alignment:
Q  43 tacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgc 142  Q
    |||||||| ||||| |||||| ||||||||||||||||  ||||||||||  |||||||||||||| ||   ||||||||||||  ||||||||||||||    
T  47657353 tacctaatgacgatcttctggtggaatcaaacttttgatgatatcttcagttgatctcagcaacgtcacccgcatatcgatccactggaacatgttgtgc 47657452  T
Q  143 tgccaaaa 150  Q
    | ||||||    
T  47657453 tcccaaaa 47657460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 42 - 148
Target Start/End: Complemental strand, 24606962 - 24606856
Alignment:
Q  42 ctacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtg 141  Q
    ||||||||||||||| |||||||||||||| ||| |||| |||||||||||  |||||||||||||| ||  ||||||| |||||  |||||||| ||||    
T  24606962 ctacctaatcacgatcttctggcggaatcagactcttgataatatcttcagttgatctcagcaacgttacccacatatcaatccacgggaacatgatgtg 24606863  T
Q  142 ctgccaa 148  Q
    || ||||    
T  24606862 ctcccaa 24606856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 42 - 143
Target Start/End: Complemental strand, 31324384 - 31324283
Alignment:
Q  42 ctacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtg 141  Q
    ||||||||||| ||| |||| ||||||||||||| |||||||| |||||||  |||||||||||| | ||| |||||||||||||  | |||||||||||    
T  31324384 ctacctaatcatgatcttctagcggaatcaaactgttgagaatgtcttcagttgatctcagcaactttacacacatatcgatccacggtaacatgttgtg 31324285  T
Q  142 ct 143  Q
    ||    
T  31324284 ct 31324283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 46 - 150
Target Start/End: Complemental strand, 1226365 - 1226261
Alignment:
Q  46 ctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgctgc 145  Q
    ||||| ||||| |||||||||||||||||||||||  ||||||||||  |||||||||||||| ||   ||||||||||||   |||||||||||||| |    
T  1226365 ctaatgacgatcttctggcggaatcaaacttttgatgatatcttcagttgatctcagcaacgttacccgcatatcgatccactagaacatgttgtgctcc 1226266  T
Q  146 caaaa 150  Q
    |||||    
T  1226265 caaaa 1226261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 43 - 150
Target Start/End: Original strand, 43889497 - 43889604
Alignment:
Q  43 tacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgc 142  Q
    |||||||| ||||| |||||||||||||||||||||||  ||||||||||  ||||||| |||||| ||   ||||||||||||  |||||||| |||||    
T  43889497 tacctaatgacgatcttctggcggaatcaaacttttgattatatcttcagttgatctcaacaacgtcacccgcatatcgatccactggaacatgatgtgc 43889596  T
Q  143 tgccaaaa 150  Q
    | ||||||    
T  43889597 tcccaaaa 43889604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 43 - 143
Target Start/End: Original strand, 957453 - 957553
Alignment:
Q  43 tacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgc 142  Q
    |||||||| ||||| |||||||||||||||||||||||  ||||||| ||  |||||||||||||| ||   ||||||||||||  |||||||| |||||    
T  957453 tacctaatgacgatcttctggcggaatcaaacttttgatgatatctttagttgatctcagcaacgtcacccgcatatcgatccactggaacatgctgtgc 957552  T
Q  143 t 143  Q
    |    
T  957553 t 957553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 42 - 150
Target Start/End: Complemental strand, 18412805 - 18412697
Alignment:
Q  42 ctacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtg 141  Q
    ||||||||||||||| ||||||| |||||||| | |||| ||||| |||||  |||||||||||||| |||  ||||||||||||  | |||||| ||||    
T  18412805 ctacctaatcacgatcttctggcagaatcaaattgttgataatatattcagttgatctcagcaacgttacacgcatatcgatccactgaaacatggtgtg 18412706  T
Q  142 ctgccaaaa 150  Q
    || ||||||    
T  18412705 ctcccaaaa 18412697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 46 - 150
Target Start/End: Original strand, 33163545 - 33163649
Alignment:
Q  46 ctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgctgc 145  Q
    ||||| ||||| ||||||||||||||| || ||||  ||||||||||  ||||||| |||||| ||  |||||||||||||  ||||||||||||||| |    
T  33163545 ctaatgacgatcttctggcggaatcaagctgttgatgatatcttcagttgatctcaacaacgttacccacatatcgatccactggaacatgttgtgctcc 33163644  T
Q  146 caaaa 150  Q
    |||||    
T  33163645 caaaa 33163649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 43 - 150
Target Start/End: Original strand, 4785420 - 4785527
Alignment:
Q  43 tacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgc 142  Q
    |||||||| ||||| || ||||||||||||||| |||| |||||||||||  ||| ||||||||||  |   ||||||||||||  ||||||||||||||    
T  4785420 tacctaatgacgatcttgtggcggaatcaaactgttgataatatcttcagttgatatcagcaacgttccccgcatatcgatccactggaacatgttgtgc 4785519  T
Q  143 tgccaaaa 150  Q
    | ||||||    
T  4785520 tcccaaaa 4785527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 43 - 150
Target Start/End: Complemental strand, 21169660 - 21169553
Alignment:
Q  43 tacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgc 142  Q
    |||||||| ||||| |||||||||||||||| ||||||  ||||||||||  |||||||||||||| ||   ||||||||||||  || ||||| |||||    
T  21169660 tacctaatgacgatcttctggcggaatcaaatttttgatgatatcttcagttgatctcagcaacgtcacctgcatatcgatccactggtacatgctgtgc 21169561  T
Q  143 tgccaaaa 150  Q
    | ||||||    
T  21169560 tcccaaaa 21169553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 43 - 150
Target Start/End: Original strand, 49817642 - 49817749
Alignment:
Q  43 tacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgc 142  Q
    |||||||| ||||| |||||||||||||| ||| |||| |||||||||||  |||||||||||||| ||   ||||||||||||   ||||||| |||||    
T  49817642 tacctaatgacgatcttctggcggaatcagactgttgataatatcttcagttgatctcagcaacgttacccgcatatcgatccactagaacatgatgtgc 49817741  T
Q  143 tgccaaaa 150  Q
    | ||||||    
T  49817742 tcccaaaa 49817749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 46 - 143
Target Start/End: Complemental strand, 49064185 - 49064088
Alignment:
Q  46 ctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgct 143  Q
    ||||| ||||| |||||||||||||||||||||||  ||||||||||  ||||| |||||||| ||   ||||||||||||  | |||||||||||||    
T  49064185 ctaatgacgatcttctggcggaatcaaacttttgatgatatcttcagttgatctaagcaacgtcacccgcatatcgatccacggaaacatgttgtgct 49064088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 46 - 150
Target Start/End: Original strand, 242417 - 242521
Alignment:
Q  46 ctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgctgc 145  Q
    ||||| ||||| ||||||||||||||| || ||||  ||||||||||  |||||||||||||| ||   ||||||||||||  |||||||| |||||| |    
T  242417 ctaatgacgatcttctggcggaatcaagctgttgatgatatcttcagttgatctcagcaacgttacccgcatatcgatccactggaacatgatgtgctcc 242516  T
Q  146 caaaa 150  Q
    |||||    
T  242517 caaaa 242521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 46 - 150
Target Start/End: Original strand, 6282324 - 6282428
Alignment:
Q  46 ctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgctgc 145  Q
    ||||| ||||| ||||||| |||||||||||||||  ||||||||||  ||||| |||||| | ||   ||||||||||||  ||||||||||||||| |    
T  6282324 ctaatgacgatcttctggcagaatcaaacttttgatgatatcttcagttgatcttagcaacttcacccgcatatcgatccactggaacatgttgtgctcc 6282423  T
Q  146 caaaa 150  Q
    |||||    
T  6282424 caaaa 6282428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 46 - 150
Target Start/End: Original strand, 21017178 - 21017282
Alignment:
Q  46 ctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgctgc 145  Q
    ||||| ||||| |||||||||||||||||||||||  ||||||||||  ||||| |||||| | ||   ||||||||||||  |||||||| |||||| |    
T  21017178 ctaatgacgatcttctggcggaatcaaacttttgatgatatcttcagttgatctaagcaacttcacccgcatatcgatccactggaacatgctgtgctcc 21017277  T
Q  146 caaaa 150  Q
    |||||    
T  21017278 caaaa 21017282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 46 - 150
Target Start/End: Complemental strand, 27759533 - 27759429
Alignment:
Q  46 ctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgctgc 145  Q
    ||||| ||||| ||||||||||||||| || ||||  ||||||||||  |||||||||||||| ||   ||||||||||||  |||||||| |||||| |    
T  27759533 ctaatgacgatcttctggcggaatcaagctgttgatgatatcttcagttgatctcagcaacgttactcgcatatcgatccactggaacatgctgtgctcc 27759434  T
Q  146 caaaa 150  Q
    |||||    
T  27759433 caaaa 27759429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 58 - 150
Target Start/End: Original strand, 40353786 - 40353878
Alignment:
Q  58 ttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgctgccaaaa 150  Q
    |||||||||||||||||||||||  ||||||||||  ||||| |||||| | ||   ||||||||||||  ||||||||||||||| ||||||    
T  40353786 ttctggcggaatcaaacttttgatgatatcttcagttgatctaagcaacttcacccgcatatcgatccactggaacatgttgtgctcccaaaa 40353878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 46 - 150
Target Start/End: Original strand, 41794563 - 41794667
Alignment:
Q  46 ctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgctgc 145  Q
    ||||| ||||| || ||||||||||||||||||||  ||||||||||  ||||| |||||| | ||   ||||||||||||  ||||||||||||||| |    
T  41794563 ctaatgacgatcttgtggcggaatcaaacttttgatgatatcttcagttgatctaagcaacttcacccgcatatcgatccactggaacatgttgtgctcc 41794662  T
Q  146 caaaa 150  Q
    |||||    
T  41794663 caaaa 41794667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 46 - 150
Target Start/End: Complemental strand, 49094951 - 49094847
Alignment:
Q  46 ctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgctgc 145  Q
    ||||| ||||| || ||||||||||||||||||||  ||||||||||  ||||| |||||| | ||   ||||||||||||  ||||||||||||||| |    
T  49094951 ctaatgacgatcttgtggcggaatcaaacttttgacgatatcttcagttgatctaagcaacttcacccgcatatcgatccactggaacatgttgtgctcc 49094852  T
Q  146 caaaa 150  Q
    |||||    
T  49094851 caaaa 49094847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 43 - 150
Target Start/End: Original strand, 26591683 - 26591790
Alignment:
Q  43 tacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgc 142  Q
    |||||||| ||||| |||||||||||||||  | ||||  ||||||||||  ||||| |||||||| ||   ||||||||||||  ||||||||||||||    
T  26591683 tacctaatgacgatcttctggcggaatcaagttgttgatgatatcttcagttgatcttagcaacgttacccgcatatcgatccactggaacatgttgtgc 26591782  T
Q  143 tgccaaaa 150  Q
    | ||||||    
T  26591783 tcccaaaa 26591790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 46 - 143
Target Start/End: Original strand, 32937903 - 32938000
Alignment:
Q  46 ctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgct 143  Q
    ||||| ||||| |||||||||||||||| ||||||  ||||||||||  ||||||| |||||| ||   ||||||||||||  |||||||| ||||||    
T  32937903 ctaatgacgatcttctggcggaatcaaatttttgatgatatcttcagttgatctcaacaacgttacccgcatatcgatccactggaacatgctgtgct 32938000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 66 - 179
Target Start/End: Complemental strand, 44100677 - 44100564
Alignment:
Q  66 gaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgctgccaaaaaatcgagaacatgct 165  Q
    |||||||| | ||||||||||||||||  ||||||||||| ||  ||  ||| |||||||   | |||||||||||||| | |||  |||| ||||||||    
T  44100677 gaatcaaattcttgagaatatcttcaggtgatctcagcaatgtagcatccatctcgatcctcggaaacatgttgtgctgaccaaatgtcgataacatgct 44100578  T
Q  166 cctcacatcgtcgt 179  Q
    ||||||||||||||    
T  44100577 cctcacatcgtcgt 44100564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 46 - 150
Target Start/End: Complemental strand, 1042955 - 1042851
Alignment:
Q  46 ctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgctgc 145  Q
    ||||| ||||| |||||||||||||||  | ||||  ||||||||||  |||||||||||||| ||   ||||||||||||  |||||||| |||||| |    
T  1042955 ctaatgacgatcttctggcggaatcaagttgttgattatatcttcagttgatctcagcaacgtcacccgcatatcgatccactggaacatgctgtgctcc 1042856  T
Q  146 caaaa 150  Q
    |||||    
T  1042855 caaaa 1042851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 46 - 150
Target Start/End: Original strand, 6177316 - 6177420
Alignment:
Q  46 ctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgctgc 145  Q
    ||||| ||||| || ||||||||||||||||||||  ||||||||||  ||||| |||||| | ||   ||||||||||||  |||||||| |||||| |    
T  6177316 ctaatgacgatcttgtggcggaatcaaacttttgatgatatcttcagttgatctaagcaacttcacccgcatatcgatccactggaacatgctgtgctcc 6177415  T
Q  146 caaaa 150  Q
    |||||    
T  6177416 caaaa 6177420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 46 - 150
Target Start/End: Complemental strand, 21711736 - 21711632
Alignment:
Q  46 ctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgctgc 145  Q
    ||||| ||||| |||||||||||||||  | ||||  ||||||| ||  |||||||||||||| ||   ||||||||||||  ||||||||||||||| |    
T  21711736 ctaatgacgatcttctggcggaatcaagttgttgatgatatctttagttgatctcagcaacgtcacccgcatatcgatccactggaacatgttgtgctcc 21711637  T
Q  146 caaaa 150  Q
    |||||    
T  21711636 caaaa 21711632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 46 - 150
Target Start/End: Complemental strand, 25762804 - 25762700
Alignment:
Q  46 ctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgctgc 145  Q
    ||||| ||||| |||||||||||||||  | ||||  ||||||||||  |||||||||||||| ||   ||||||||||||   |||||||||||||| |    
T  25762804 ctaatgacgatcttctggcggaatcaagttgttgatgatatcttcagttgatctcagcaacgttacccgcatatcgatccaccagaacatgttgtgctcc 25762705  T
Q  146 caaaa 150  Q
    |||||    
T  25762704 caaaa 25762700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 46 - 150
Target Start/End: Original strand, 51428193 - 51428297
Alignment:
Q  46 ctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgctgc 145  Q
    ||||| ||||| |||| |||||||||| || ||||  ||||||||||  ||||||| |||||| ||   ||||||||||||  ||||||||||||||| |    
T  51428193 ctaatgacgatcttcttgcggaatcaagctgttgatgatatcttcagttgatctcaacaacgttacccgcatatcgatccactggaacatgttgtgctcc 51428292  T
Q  146 caaaa 150  Q
    |||||    
T  51428293 caaaa 51428297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 46 - 150
Target Start/End: Complemental strand, 55796949 - 55796845
Alignment:
Q  46 ctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgctgc 145  Q
    ||||| ||||| || ||||||||||||||||||||  ||||||||||  ||||| |||||| | ||   ||||||||||||  |||||||| |||||| |    
T  55796949 ctaatgacgatcttgtggcggaatcaaacttttgatgatatcttcagttgatctaagcaacttcacccgcatatcgatccactggaacatgctgtgctcc 55796850  T
Q  146 caaaa 150  Q
    |||||    
T  55796849 caaaa 55796845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 46 - 150
Target Start/End: Complemental strand, 56139116 - 56139012
Alignment:
Q  46 ctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgctgc 145  Q
    ||||| ||||| || ||||||||||||||||||||  ||||||||||  ||||| |||||| | ||   ||||||||||||  |||||||| |||||| |    
T  56139116 ctaatgacgatcttgtggcggaatcaaacttttgatgatatcttcagttgatctaagcaacttcacccgcatatcgatccactggaacatgctgtgctcc 56139017  T
Q  146 caaaa 150  Q
    |||||    
T  56139016 caaaa 56139012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 108
Target Start/End: Complemental strand, 31931808 - 31931717
Alignment:
Q  17 ataaagacactacataataatgatgctacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgt 108  Q
    |||||||||||||||||||||| ||| || ||| ||  ||  | |||| |||||||| | || ||||||||||||| |||||||||||||||    
T  31931808 ataaagacactacataataatggtgccacataaacataatcatgtggcagaatcaaattcttcagaatatcttcaggcgatctcagcaacgt 31931717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 150
Target Start/End: Original strand, 34153288 - 34153391
Alignment:
Q  47 taatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgctgcc 146  Q
    |||| ||||| ||||||| |||||||||||||||  ||||||||||  ||||||| |||||| |    ||||| ||||||  ||||||||||||||| ||    
T  34153288 taatgacgatcttctggcagaatcaaacttttgatgatatcttcagttgatctcaccaacgtcatccgcatattgatccactggaacatgttgtgctccc 34153387  T
Q  147 aaaa 150  Q
    ||||    
T  34153388 aaaa 34153391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 150
Target Start/End: Original strand, 49791934 - 49792041
Alignment:
Q  43 tacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgc 142  Q
    |||||||| | ||| || ||||||||||||  | ||||  ||||||||||  |||||||||||||| ||   ||||||||||||  ||||||||||||||    
T  49791934 tacctaatgatgatcttttggcggaatcaagttgttgatgatatcttcagttgatctcagcaacgttacctgcatatcgatccactggaacatgttgtgc 49792033  T
Q  143 tgccaaaa 150  Q
    | ||||||    
T  49792034 tcccaaaa 49792041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 46 - 143
Target Start/End: Complemental strand, 37866613 - 37866516
Alignment:
Q  46 ctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgct 143  Q
    ||||| ||||| |||| ||||||||||  | ||||  ||||||||||  |||||||||||||| ||   ||||||||||||  |||||||||||||||    
T  37866613 ctaatgacgatcttctagcggaatcaagatattgatgatatcttcagttgatctcagcaacgtcacccgcatatcgatccactggaacatgttgtgct 37866516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 43 - 108
Target Start/End: Complemental strand, 42886475 - 42886410
Alignment:
Q  43 tacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgt 108  Q
    |||||||| | ||| |||||||||||||| ||| |||| |||||||||||  ||||||||||||||    
T  42886475 tacctaatgatgatcttctggcggaatcagactgttgataatatcttcagttgatctcagcaacgt 42886410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 46 - 150
Target Start/End: Original strand, 46816526 - 46816628
Alignment:
Q  46 ctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgctgc 145  Q
    ||||| ||||| ||||||||||||||| || ||||  |||||||||   ||||||| |||||| ||   ||||||||||||  ||||||||||||||| |    
T  46816526 ctaatgacgatcttctggcggaatcaagctattgatgatatcttcat--gatctcaacaacgttacctgcatatcgatccactggaacatgttgtgctcc 46816623  T
Q  146 caaaa 150  Q
    |||||    
T  46816624 caaaa 46816628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 150
Target Start/End: Complemental strand, 10312482 - 10312374
Alignment:
Q  42 ctacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtg 141  Q
    ||||||||||||||| |||  ||||||| | | | |||| |||||||||||  ||||| | |||||| ||   ||||||||||||  |||||||||||||    
T  10312482 ctacctaatcacgatcttccagcggaattagattgttgataatatcttcagttgatcttaacaacgttacccgcatatcgatccactggaacatgttgtg 10312383  T
Q  142 ctgccaaaa 150  Q
    || ||||||    
T  10312382 ctcccaaaa 10312374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 150
Target Start/End: Complemental strand, 11288504 - 11288397
Alignment:
Q  42 ctacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtg 141  Q
    |||| |||||||||| ||||  | |||||||| || ||| |||||||||||  |||||||||||||| ||   ||||||||||||  |||||||| ||||    
T  11288504 ctacttaatcacgatcttctaacagaatcaaa-ttgtgataatatcttcagttgatctcagcaacgttactcgcatatcgatccactggaacatgatgtg 11288406  T
Q  142 ctgccaaaa 150  Q
    || ||||||    
T  11288405 ctcccaaaa 11288397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 126
Target Start/End: Original strand, 49817194 - 49817278
Alignment:
Q  42 ctacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatcca 126  Q
    ||||||||||||||| || |||| |||||| ||| |||| ||||||||||   ||||||| |||||| |||  ||||||||||||    
T  49817194 ctacctaatcacgatcttttggcagaatcagactgttgataatatcttcatttgatctcatcaacgttacacgcatatcgatcca 49817278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 83 - 150
Target Start/End: Complemental strand, 45939694 - 45939627
Alignment:
Q  83 atatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgctgccaaaa 150  Q
    ||||||||||  |||||||||||||| ||   ||||||||||||  ||||||||||||||| ||||||    
T  45939694 atatcttcagttgatctcagcaacgttactcgcatatcgatccactggaacatgttgtgctcccaaaa 45939627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 126
Target Start/End: Original strand, 49423756 - 49423839
Alignment:
Q  43 tacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatcca 126  Q
    |||||||| ||||| || |||| |||||||||||||||  || |||||||  |||||||||||||| ||   ||||||||||||    
T  49423756 tacctaatgacgatcttatggcagaatcaaacttttgatgatttcttcagttgatctcagcaacgtcacccgcatatcgatcca 49423839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 149
Target Start/End: Original strand, 36776537 - 36776623
Alignment:
Q  63 gcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgctgccaaa 149  Q
    ||||||||||||||||||  ||||||||||  ||||||| |||||| ||   ||||||||||||  ||||||||  ||||| |||||    
T  36776537 gcggaatcaaacttttgatgatatcttcagttgatctcaacaacgtcacccgcatatcgatccactggaacatgccgtgctcccaaa 36776623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 150
Target Start/End: Original strand, 31824630 - 31824734
Alignment:
Q  46 ctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgctgc 145  Q
    ||||| ||||| |||| |||||||||| || ||||  ||||||||||  ||||| |||||||| ||   ||||| ||||||   |||||||||||||| |    
T  31824630 ctaatgacgatcttctagcggaatcaagctgttgatgatatcttcagttgatctaagcaacgttacccgcatattgatccactagaacatgttgtgctcc 31824729  T
Q  146 caaaa 150  Q
    |||||    
T  31824730 caaaa 31824734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 150
Target Start/End: Complemental strand, 39589135 - 39589031
Alignment:
Q  46 ctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgctgc 145  Q
    ||||| ||||| |||| ||||||||||  | ||||  ||||||||||  |||||||||||||| |    ||||||||||||  |||||||| |||||| |    
T  39589135 ctaatgacgatcttctagcggaatcaagttgttgatgatatcttcagttgatctcagcaacgtcatccgcatatcgatccactggaacatgctgtgctcc 39589036  T
Q  146 caaaa 150  Q
    |||||    
T  39589035 caaaa 39589031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 150
Target Start/End: Original strand, 51027768 - 51027872
Alignment:
Q  46 ctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgctgc 145  Q
    ||||| ||||| || ||| ||||||||  | ||||  ||||||||||  ||||||| |||||| ||   ||||||||||||  ||||||||||||||| |    
T  51027768 ctaatgacgatcttatggtggaatcaagttgttgatgatatcttcagttgatctcaacaacgttacccgcatatcgatccactggaacatgttgtgctcc 51027867  T
Q  146 caaaa 150  Q
    |||||    
T  51027868 caaaa 51027872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 57 - 189
Target Start/End: Complemental strand, 36861 - 36729
Alignment:
Q  57 gttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgctgccaaaaaatcga 156  Q
    ||||| ||||||| ||||| |||||||||||||||| |||||||| ||||||||||| ||||||||||||  |||||||| |||||||  ||||| ||||    
T  36861 gttctagcggaattaaactcttgagaatatcttcaggcgatctcaacaacgtgacaagcatatcgatccacgggaacatgatgtgctgataaaaattcga 36762  T
Q  157 gaacatgctcctcacatcgtcgtcgttctttaa 189  Q
    |||||||||||||||||||||||||||| ||||    
T  36761 gaacatgctcctcacatcgtcgtcgttcgttaa 36729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 79; Significance: 4e-37; HSPs: 66)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 57 - 179
Target Start/End: Original strand, 17267305 - 17267427
Alignment:
Q  57 gttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgctgccaaaaaatcga 156  Q
    |||||||| |||||||||| ||||||||||||| || | ||||||||||||| ||  |||||||||||||  |||||||| |||||||||||||||||||    
T  17267305 gttctggcagaatcaaactcttgagaatatctttaggcaatctcagcaacgtaacttacatatcgatccacgggaacatgatgtgctgccaaaaaatcga 17267404  T
Q  157 gaacatgctcctcacatcgtcgt 179  Q
    |||||||||||||||||||||||    
T  17267405 gaacatgctcctcacatcgtcgt 17267427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 42 - 138
Target Start/End: Complemental strand, 18440969 - 18440873
Alignment:
Q  42 ctacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgtt 138  Q
    ||||||||||||||| |||||| ||||||||||| |||| |||||||||||  |||||||||||||| ||| |||||||||||||  ||||||||||    
T  18440969 ctacctaatcacgatcttctggtggaatcaaactgttgataatatcttcagttgatctcagcaacgttacacacatatcgatccactggaacatgtt 18440873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 42 - 138
Target Start/End: Complemental strand, 19486043 - 19485947
Alignment:
Q  42 ctacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgtt 138  Q
    ||||||||||||||| |||||| ||||||||||| |||| |||||||||||  |||||||||||||| ||| |||||||||||||  ||||||||||    
T  19486043 ctacctaatcacgatcttctggtggaatcaaactgttgataatatcttcagttgatctcagcaacgttacacacatatcgatccactggaacatgtt 19485947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 43 - 150
Target Start/End: Original strand, 55206880 - 55206987
Alignment:
Q  43 tacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgc 142  Q
    |||||||| ||||| |||||||||||||||||||||||  ||||||||||  |||||||||||||| ||   ||||||||||||  ||||||||||||||    
T  55206880 tacctaatgacgatcttctggcggaatcaaacttttgatgatatcttcagttgatctcagcaacgtcacccgcatatcgatccactggaacatgttgtgc 55206979  T
Q  143 tgccaaaa 150  Q
    | ||||||    
T  55206980 tcccaaaa 55206987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 43 - 150
Target Start/End: Original strand, 34472072 - 34472179
Alignment:
Q  43 tacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgc 142  Q
    |||||||| ||||| |||||||||||| ||||||||||  ||||||||||  |||||||||||||| ||   ||||||||||||  ||||||||||||||    
T  34472072 tacctaatgacgatcttctggcggaataaaacttttgatgatatcttcagttgatctcagcaacgtcacccgcatatcgatccactggaacatgttgtgc 34472171  T
Q  143 tgccaaaa 150  Q
    | ||||||    
T  34472172 tcccaaaa 34472179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 43 - 150
Target Start/End: Original strand, 45100461 - 45100568
Alignment:
Q  43 tacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgc 142  Q
    |||||||| ||||| || ||||||||||||||||||||  ||||||||||  |||||||||||||| ||   ||||||||||||  ||||||||||||||    
T  45100461 tacctaatgacgatattatggcggaatcaaacttttgatgatatcttcagttgatctcagcaacgtcacccgcatatcgatccactggaacatgttgtgc 45100560  T
Q  143 tgccaaaa 150  Q
    | ||||||    
T  45100561 tcccaaaa 45100568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 43 - 150
Target Start/End: Complemental strand, 51015500 - 51015393
Alignment:
Q  43 tacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgc 142  Q
    |||||||| ||||| |||||||||||||||||||||||  ||||||||||  ||||||||||||||  |   ||||||||||||  ||||||||||||||    
T  51015500 tacctaatgacgatcttctggcggaatcaaacttttgatgatatcttcagttgatctcagcaacgtttcccgcatatcgatccactggaacatgttgtgc 51015401  T
Q  143 tgccaaaa 150  Q
    | ||||||    
T  51015400 tcccaaaa 51015393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 43 - 149
Target Start/End: Original strand, 36721385 - 36721491
Alignment:
Q  43 tacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgc 142  Q
    |||| ||| ||||| |||||||||||||||||||||||  ||||||||||  |||||||||||||| || | ||||||||||||   |||||||||||||    
T  36721385 taccaaatgacgatcttctggcggaatcaaacttttgatgatatcttcagttgatctcagcaacgtcaccagcatatcgatccactagaacatgttgtgc 36721484  T
Q  143 tgccaaa 149  Q
    | |||||    
T  36721485 tcccaaa 36721491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 46 - 150
Target Start/End: Original strand, 34693289 - 34693393
Alignment:
Q  46 ctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgctgc 145  Q
    ||||| ||||| |||||||||||||||| ||||||  ||||||||||  |||||||||||||| ||   ||||||||||||  ||||||||||||||| |    
T  34693289 ctaatgacgatcttctggcggaatcaaagttttgatgatatcttcagttgatctcagcaacgtcacccgcatatcgatccactggaacatgttgtgctcc 34693388  T
Q  146 caaaa 150  Q
    |||||    
T  34693389 caaaa 34693393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 46 - 150
Target Start/End: Complemental strand, 44927683 - 44927579
Alignment:
Q  46 ctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgctgc 145  Q
    ||||| ||||| |||||||||||||||||||||||  ||||||||||  ||||||| |||||| ||   ||||||||||||  ||||||||||||||| |    
T  44927683 ctaatgacgatcttctggcggaatcaaacttttgatgatatcttcagttgatctcaacaacgtcacccgcatatcgatccactggaacatgttgtgctcc 44927584  T
Q  146 caaaa 150  Q
    |||||    
T  44927583 caaaa 44927579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 46 - 150
Target Start/End: Original strand, 53826695 - 53826799
Alignment:
Q  46 ctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgctgc 145  Q
    ||||| ||||| |||||||||||||||  | ||||  ||||||||||  |||||||||||||| |||  ||||||||||||| ||||||||||||||| |    
T  53826695 ctaatgacgatcttctggcggaatcaagttgttgatgatatcttcagttgatctcagcaacgttacatgcatatcgatccattggaacatgttgtgctcc 53826794  T
Q  146 caaaa 150  Q
    |||||    
T  53826795 caaaa 53826799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 47 - 150
Target Start/End: Original strand, 6464345 - 6464448
Alignment:
Q  47 taatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgctgcc 146  Q
    |||||||||| |||| || |||||| ||| |||| |||||||||||  |||||||||||||| ||  |||||||||||||  ||||||||||||||| ||    
T  6464345 taatcacgatcttcttgcagaatcagactgttgataatatcttcagttgatctcagcaacgttacccacatatcgatccactggaacatgttgtgctccc 6464444  T
Q  147 aaaa 150  Q
    ||||    
T  6464445 aaaa 6464448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 43 - 150
Target Start/End: Complemental strand, 41804125 - 41804018
Alignment:
Q  43 tacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgc 142  Q
    |||||||| ||||| |||||||||||||||||||||||  |||||||||   ||||||| |||||| ||   ||||||||||||  ||||||||||||||    
T  41804125 tacctaatgacgatcttctggcggaatcaaacttttgattatatcttcatttgatctcatcaacgtcactctcatatcgatccactggaacatgttgtgc 41804026  T
Q  143 tgccaaaa 150  Q
    | ||||||    
T  41804025 tcccaaaa 41804018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 43 - 150
Target Start/End: Original strand, 46414330 - 46414437
Alignment:
Q  43 tacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgc 142  Q
    |||||||| ||||| |||||||||||||||||||||||  ||||||| ||  |||||||||||||| ||   ||||||||||||   |||||||||||||    
T  46414330 tacctaatgacgatcttctggcggaatcaaacttttgatgatatcttaagttgatctcagcaacgtcacccgcatatcgatccactagaacatgttgtgc 46414429  T
Q  143 tgccaaaa 150  Q
    | ||||||    
T  46414430 tcccaaaa 46414437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 58 - 143
Target Start/End: Original strand, 46346623 - 46346708
Alignment:
Q  58 ttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgct 143  Q
    |||||||||||||||||||||||  ||||||||||  |||||||||||||| ||   ||||||||||||  |||||||||||||||    
T  46346623 ttctggcggaatcaaacttttgatgatatcttcagttgatctcagcaacgtcacccgcatatcgatccactggaacatgttgtgct 46346708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 46 - 150
Target Start/End: Original strand, 24702271 - 24702375
Alignment:
Q  46 ctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgctgc 145  Q
    ||||| ||||| ||||||||||||||| |||||||  ||||||||||  ||||||| |||||| ||   ||||||||||||  ||||||||||||||| |    
T  24702271 ctaatgacgatcttctggcggaatcaagcttttgatgatatcttcagttgatctcaacaacgtcacctgcatatcgatccactggaacatgttgtgctcc 24702370  T
Q  146 caaaa 150  Q
    |||||    
T  24702371 caaaa 24702375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 42 - 150
Target Start/End: Complemental strand, 27187172 - 27187064
Alignment:
Q  42 ctacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtg 141  Q
    ||||||||||||||| || ||||||||||| | | |||| |||||||| ||  |||||||||||||| ||   ||||||||||||  |||||||||||||    
T  27187172 ctacctaatcacgatattatggcggaatcagattgttgataatatctttagttgatctcagcaacgttacccgcatatcgatccaatggaacatgttgtg 27187073  T
Q  142 ctgccaaaa 150  Q
    || ||||||    
T  27187072 ctcccaaaa 27187064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 43 - 150
Target Start/End: Complemental strand, 2428710 - 2428603
Alignment:
Q  43 tacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgc 142  Q
    |||||||| ||||| |||| ||||||||||||||||||  ||||||||||  |||||||||||||| ||   ||||||||||||   ||| |||||||||    
T  2428710 tacctaatgacgatcttctagcggaatcaaacttttgatgatatcttcagttgatctcagcaacgtcacccgcatatcgatccactagaaaatgttgtgc 2428611  T
Q  143 tgccaaaa 150  Q
    | ||||||    
T  2428610 tcccaaaa 2428603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 43 - 126
Target Start/End: Complemental strand, 30192761 - 30192678
Alignment:
Q  43 tacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatcca 126  Q
    |||||||| ||||| |||||||||||||||||||||||  ||||||||||  |||||||||||||| ||   ||||||||||||    
T  30192761 tacctaatgacgatcttctggcggaatcaaacttttgatgatatcttcagttgatctcagcaacgtcacccgcatatcgatcca 30192678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 43 - 150
Target Start/End: Complemental strand, 37281675 - 37281568
Alignment:
Q  43 tacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgc 142  Q
    |||||||| ||||| |||||||||||| ||||||||||  |||||||| |  |||||||||||||| ||   ||||||||||||  | ||||||||||||    
T  37281675 tacctaatgacgatcttctggcggaattaaacttttgatgatatcttccgttgatctcagcaacgtcacccgcatatcgatccactgaaacatgttgtgc 37281576  T
Q  143 tgccaaaa 150  Q
    | ||||||    
T  37281575 tcccaaaa 37281568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 43 - 150
Target Start/End: Complemental strand, 41578129 - 41578022
Alignment:
Q  43 tacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgc 142  Q
    |||||||| | ||| |||||||||||||||||||||||  ||||||||||  |||||||||||||| ||   ||||| ||||||  |||||||| |||||    
T  41578129 tacctaatgatgatcttctggcggaatcaaacttttgatgatatcttcagttgatctcagcaacgtcactcgcatattgatccactggaacatgctgtgc 41578030  T
Q  143 tgccaaaa 150  Q
    | ||||||    
T  41578029 tcccaaaa 41578022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 43 - 150
Target Start/End: Original strand, 51013274 - 51013381
Alignment:
Q  43 tacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgc 142  Q
    |||||||| ||||| |||||||||||||||||||||||  ||||||||||  ||||| |||||||| ||   ||||||||| ||  |||||||||||||     
T  51013274 tacctaatgacgatcttctggcggaatcaaacttttgatgatatcttcagttgatcttagcaacgtcacccgcatatcgatacactggaacatgttgtgt 51013373  T
Q  143 tgccaaaa 150  Q
    | ||||||    
T  51013374 tcccaaaa 51013381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 44 - 150
Target Start/End: Original strand, 52569406 - 52569512
Alignment:
Q  44 acctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgct 143  Q
    ||||||| ||||| |||||||||||||||||| ||||  ||||||||||  ||||||||||| || ||   ||||||||| ||  |||||||||||||||    
T  52569406 acctaatgacgatcttctggcggaatcaaactcttgatgatatcttcagttgatctcagcaatgtcacccgcatatcgattcaccggaacatgttgtgct 52569505  T
Q  144 gccaaaa 150  Q
     ||||||    
T  52569506 cccaaaa 52569512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 58 - 143
Target Start/End: Original strand, 19453240 - 19453325
Alignment:
Q  58 ttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgct 143  Q
    |||||| ||||||||||||||||  ||||||| ||  |||||||||||||| ||   ||||||||||||| |||||||||||||||    
T  19453240 ttctggtggaatcaaacttttgatgatatctttagttgatctcagcaacgtcacccgcatatcgatccattggaacatgttgtgct 19453325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 46 - 150
Target Start/End: Original strand, 13895869 - 13895973
Alignment:
Q  46 ctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgctgc 145  Q
    ||||| ||||| |||| |||||||||| |||||||  ||||||||||  |||||||||||||| ||   ||||||||||||  |||||||| |||||| |    
T  13895869 ctaatgacgatcttctagcggaatcaagcttttgatgatatcttcagttgatctcagcaacgtcacccgcatatcgatccactggaacatgctgtgctcc 13895968  T
Q  146 caaaa 150  Q
    |||||    
T  13895969 caaaa 13895973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 42 - 150
Target Start/End: Complemental strand, 14265629 - 14265521
Alignment:
Q  42 ctacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtg 141  Q
    ||||||||||||||| ||| |||||||||||||| | ||||||||||| ||   ||||||| ||||| ||| ||| |||||||||  | |||||||||||    
T  14265629 ctacctaatcacgatcttcaggcggaatcaaactctggagaatatctttagttaatctcagtaacgttacacacaaatcgatccacggtaacatgttgtg 14265530  T
Q  142 ctgccaaaa 150  Q
     | ||||||    
T  14265529 gtcccaaaa 14265521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 108
Target Start/End: Complemental strand, 17371052 - 17370952
Alignment:
Q  8 tccaagaatataaagacactacataataatgatgctacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacg 107  Q
    ||||| || ||||||||||||||||||||| ||||||||||  ||  || || |||  |||||||||| |||||||||||||||| ||| |||| |||||    
T  17371052 tccaacaaaataaagacactacataataattatgctacctatacataatcttgtggaagaatcaaactcttgagaatatcttcaggcgacctcaacaacg 17370953  T
Q  108 t 108  Q
    |    
T  17370952 t 17370952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 43 - 143
Target Start/End: Original strand, 34647263 - 34647363
Alignment:
Q  43 tacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgc 142  Q
    |||||||| ||||| |||| ||| ||||||||||||||  ||||||||||  |||||||||||||| ||   |||||| |||||  ||||||||||||||    
T  34647263 tacctaatgacgatcttctagcgtaatcaaacttttgatgatatcttcagttgatctcagcaacgtcacccgcatatcaatccactggaacatgttgtgc 34647362  T
Q  143 t 143  Q
    |    
T  34647363 t 34647363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 46 - 150
Target Start/End: Original strand, 39416947 - 39417051
Alignment:
Q  46 ctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgctgc 145  Q
    ||||| ||||| |||||||| |||||| || ||||  ||||||||||  |||||||||||||| ||   ||||||||||||  ||||||||||||||| |    
T  39416947 ctaatgacgatcttctggcgaaatcaagctattgatgatatcttcagttgatctcagcaacgttacccgcatatcgatccactggaacatgttgtgctcc 39417046  T
Q  146 caaaa 150  Q
    |||||    
T  39417047 caaaa 39417051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 46 - 150
Target Start/End: Original strand, 49218735 - 49218839
Alignment:
Q  46 ctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgctgc 145  Q
    ||||| ||||| |||||||||||||||  | |||| |||||||||||  |||||||||||||| ||   ||||||||||||  ||||||||||| ||| |    
T  49218735 ctaatgacgatcttctggcggaatcaagttgttgataatatcttcagttgatctcagcaacgtcactcgcatatcgatccactggaacatgttgcgctcc 49218834  T
Q  146 caaaa 150  Q
    |||||    
T  49218835 caaaa 49218839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 46 - 150
Target Start/End: Complemental strand, 50997608 - 50997504
Alignment:
Q  46 ctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgctgc 145  Q
    ||||| ||||| |||||||||||||||||||||||  ||||||||||  ||||| |||||| | ||   |||||||||| |  ||||||||||||||| |    
T  50997608 ctaatgacgatcttctggcggaatcaaacttttgatgatatcttcagttgatctaagcaacttcacccgcatatcgatcaactggaacatgttgtgctcc 50997509  T
Q  146 caaaa 150  Q
    |||||    
T  50997508 caaaa 50997504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 43 - 138
Target Start/End: Complemental strand, 7246317 - 7246222
Alignment:
Q  43 tacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgtt 138  Q
    |||||||| ||||| |||||||||||||||||||||||  ||||||||||  ||||| |||||||| ||   ||||||||| ||  ||||||||||    
T  7246317 tacctaatgacgatcttctggcggaatcaaacttttgatgatatcttcagttgatctaagcaacgtcacccgcatatcgatacactggaacatgtt 7246222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 47 - 150
Target Start/End: Original strand, 25887611 - 25887713
Alignment:
Q  47 taatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgctgcc 146  Q
    |||||||||| |||| ||||||||||||| | ||||||||||||||  ||||||| ||||||  || |||||| ||||||   |||||||||||||| ||    
T  25887611 taatcacgatattctagcggaatcaaactgtggagaatatcttcagttgatctcaacaacgttccacacatat-gatccacgagaacatgttgtgctccc 25887709  T
Q  147 aaaa 150  Q
    ||||    
T  25887710 aaaa 25887713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 43 - 150
Target Start/End: Original strand, 50458687 - 50458794
Alignment:
Q  43 tacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgc 142  Q
    |||||||| ||||| ||| |||||||||||||||||||  ||||||||||   |||||| |||||| ||   |||||| |||||  ||||||||||||||    
T  50458687 tacctaatgacgatcttcaggcggaatcaaacttttgatgatatcttcagtttatctcaacaacgtcacccgcatatctatccactggaacatgttgtgc 50458786  T
Q  143 tgccaaaa 150  Q
    | ||||||    
T  50458787 tcccaaaa 50458794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 17 - 92
Target Start/End: Original strand, 55390749 - 55390824
Alignment:
Q  17 ataaagacactacataataatgatgctacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcag 92  Q
    ||||||||||||||||||| |||||||| |||| ||  || || ||||  ||||||||||||||||||||||||||    
T  55390749 ataaagacactacataatattgatgctatctaaacataatcttgtggcataatcaaacttttgagaatatcttcag 55390824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 42 - 136
Target Start/End: Original strand, 774333 - 774427
Alignment:
Q  42 ctacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatg 136  Q
    ||||||||||||||| |||||| ||||||| ||| ||||  ||||||||||  |||||||||||||| ||   ||||||||||||  ||||||||    
T  774333 ctacctaatcacgatcttctggtggaatcagactcttgatgatatcttcagttgatctcagcaacgttacccgcatatcgatccactggaacatg 774427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 43 - 153
Target Start/End: Original strand, 8633355 - 8633465
Alignment:
Q  43 tacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgc 142  Q
    |||||||| ||||| |||||||||||||| ||| |||| |||||||||||| |||| || |||||| ||   ||||||||||||  |||||| |||||      
T  8633355 tacctaatgacgatcttctggcggaatcagactgttgataatatcttcagatgatcgcaacaacgttacccgcatatcgatccactggaacacgttgtca 8633454  T
Q  143 tgccaaaaaat 153  Q
    | |||||||||    
T  8633455 tcccaaaaaat 8633465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 43 - 137
Target Start/End: Original strand, 10053271 - 10053364
Alignment:
Q  43 tacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgt 137  Q
    |||||||| ||||| |||||||||||||||||||||||  |||| |||||  |||||||||||||| ||   ||||||||||||  |||||||||    
T  10053271 tacctaatgacgatcttctggcggaatcaaacttttgatgatat-ttcagttgatctcagcaacgtcacccgcatatcgatccactggaacatgt 10053364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 52 - 150
Target Start/End: Complemental strand, 43570124 - 43570026
Alignment:
Q  52 acgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgctgccaaaa 150  Q
    ||||| |||||||| ||||||||||||||  |||||||||   |||||||||||||| ||   ||||||||||||  |||||||| |||||| ||||||    
T  43570124 acgatcttctggcgaaatcaaacttttgatgatatcttcaattgatctcagcaacgttacccgcatatcgatccactggaacatgctgtgctcccaaaa 43570026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 43 - 108
Target Start/End: Original strand, 47759887 - 47759952
Alignment:
Q  43 tacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgt 108  Q
    |||||||| ||||| |||||||||||||||||||||||  ||||||| ||  ||||||||||||||    
T  47759887 tacctaatgacgatcttctggcggaatcaaacttttgatgatatctttagttgatctcagcaacgt 47759952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 46 - 150
Target Start/End: Original strand, 2268493 - 2268597
Alignment:
Q  46 ctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgctgc 145  Q
    ||||| ||||| |||||||||||||||||||||||  ||||||||||  ||||| |||||| | ||   |||||||||| |  |||||||| |||||| |    
T  2268493 ctaatgacgatcttctggcggaatcaaacttttgatgatatcttcagttgatctaagcaacttcacccgcatatcgatctactggaacatgatgtgctcc 2268592  T
Q  146 caaaa 150  Q
    |||||    
T  2268593 caaaa 2268597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 46 - 150
Target Start/End: Original strand, 2646875 - 2646979
Alignment:
Q  46 ctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgctgc 145  Q
    ||||| ||||| |||| ||||||||||||||||||  ||||||||||  ||||| |||||| | ||   ||||||||||||  |||||||| |||||| |    
T  2646875 ctaatgacgatcttctagcggaatcaaacttttgatgatatcttcagttgatctaagcaacttcacccgcatatcgatccactggaacatgctgtgctcc 2646974  T
Q  146 caaaa 150  Q
    |||||    
T  2646975 caaaa 2646979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 46 - 150
Target Start/End: Original strand, 4004086 - 4004190
Alignment:
Q  46 ctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgctgc 145  Q
    ||||| ||||| ||||||| |||||||||||||||  ||||||||||  ||||| |||||| | ||   ||||||||||||  |||||||| |||||| |    
T  4004086 ctaatgacgatcttctggcagaatcaaacttttgatgatatcttcagttgatctaagcaacttcacccgcatatcgatccactggaacatgctgtgctcc 4004185  T
Q  146 caaaa 150  Q
    |||||    
T  4004186 caaaa 4004190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 46 - 150
Target Start/End: Complemental strand, 34049947 - 34049843
Alignment:
Q  46 ctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgctgc 145  Q
    ||||| ||||| || ||||||||||||||||||||  ||||||||||  ||||| |||||| | ||   ||||||||||||  |||||||| |||||| |    
T  34049947 ctaatgacgatcttgtggcggaatcaaacttttgatgatatcttcagttgatctaagcaacttcacccgcatatcgatccactggaacatgctgtgctcc 34049848  T
Q  146 caaaa 150  Q
    |||||    
T  34049847 caaaa 34049843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 46 - 150
Target Start/End: Complemental strand, 42382491 - 42382387
Alignment:
Q  46 ctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgctgc 145  Q
    ||||| ||||| |||||||||||||||  | ||||  ||||||||||  |||||||||||||| ||   ||||||||||||  |||||||| |||||| |    
T  42382491 ctaatgacgatcttctggcggaatcaacttgttgatgatatcttcagttgatctcagcaacgttacccgcatatcgatccactggaacatgatgtgctcc 42382392  T
Q  146 caaaa 150  Q
    |||||    
T  42382391 caaaa 42382387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 46 - 150
Target Start/End: Complemental strand, 42383271 - 42383167
Alignment:
Q  46 ctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgctgc 145  Q
    ||||| ||||| |||||||||||||||  | ||||  ||||||||||  |||||||||||||| ||   ||||||||||||  |||||||| |||||| |    
T  42383271 ctaatgacgatcttctggcggaatcaacttgttgatgatatcttcagttgatctcagcaacgttacccgcatatcgatccactggaacatgatgtgctcc 42383172  T
Q  146 caaaa 150  Q
    |||||    
T  42383171 caaaa 42383167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 46 - 150
Target Start/End: Original strand, 42950019 - 42950123
Alignment:
Q  46 ctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgctgc 145  Q
    ||||| ||||| |||||||||||||||  | ||||  ||||||||||  |||||||||||||| |    ||||||||||||  ||||||||||||||| |    
T  42950019 ctaatgacgatcttctggcggaatcaagttgttgatgatatcttcagttgatctcagcaacgtaaaccgcatatcgatccactggaacatgttgtgctcc 42950118  T
Q  146 caaaa 150  Q
    |||||    
T  42950119 caaaa 42950123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 46 - 150
Target Start/End: Complemental strand, 46403223 - 46403119
Alignment:
Q  46 ctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgctgc 145  Q
    ||||| ||||| || ||||||||||||||||||||  ||||||||||  ||||| |||||| | ||   ||||||||||||  |||||||| |||||| |    
T  46403223 ctaatgacgatcttgtggcggaatcaaacttttgatgatatcttcagttgatctaagcaacttcacccgcatatcgatccactggaacatgctgtgctcc 46403124  T
Q  146 caaaa 150  Q
    |||||    
T  46403123 caaaa 46403119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 46 - 150
Target Start/End: Original strand, 49140053 - 49140157
Alignment:
Q  46 ctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgctgc 145  Q
    ||||| ||||| || ||||||||||||||||||||  ||||||||||  ||||| |||||| | ||   ||||||||||||  |||||||| |||||| |    
T  49140053 ctaatgacgatcttgtggcggaatcaaacttttgatgatatcttcagttgatctaagcaacttcacccgcatatcgatccactggaacatgctgtgctcc 49140152  T
Q  146 caaaa 150  Q
    |||||    
T  49140153 caaaa 49140157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 46 - 150
Target Start/End: Complemental strand, 54390662 - 54390558
Alignment:
Q  46 ctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgctgc 145  Q
    ||||| ||||| || ||||||||||||||||||||  ||||||||||  ||||| |||||| | ||   ||||||||||||  |||||||| |||||| |    
T  54390662 ctaatgacgatcttgtggcggaatcaaacttttgatgatatcttcagttgatctaagcaacttcacccgcatatcgatccactggaacatgctgtgctcc 54390563  T
Q  146 caaaa 150  Q
    |||||    
T  54390562 caaaa 54390558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 150
Target Start/End: Complemental strand, 7954427 - 7954320
Alignment:
Q  43 tacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgc 142  Q
    |||||||| ||||| |||| ||||||||| | | |||| |||||||||||  ||||| |||||| | ||   ||||||||||||  ||||||||||||||    
T  7954427 tacctaatgacgatcttctagcggaatcagattgttgataatatcttcagttgatcttagcaactttacccgcatatcgatccactggaacatgttgtgc 7954328  T
Q  143 tgccaaaa 150  Q
    | ||||||    
T  7954327 tcccaaaa 7954320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 150
Target Start/End: Complemental strand, 14631668 - 14631561
Alignment:
Q  43 tacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgc 142  Q
    |||||||| ||||| ||||||| |||||||||||||||  ||||||| ||  ||||||| |||||| ||   |||||| |||||  |||||||||| |||    
T  14631668 tacctaatgacgatcttctggcagaatcaaacttttgatgatatctttagttgatctcaacaacgtcacccgcatatcaatccactggaacatgttttgc 14631569  T
Q  143 tgccaaaa 150  Q
    | ||||||    
T  14631568 tcccaaaa 14631561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 150
Target Start/End: Original strand, 25576592 - 25576694
Alignment:
Q  47 taatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgctgcc 146  Q
    |||| ||||| ||||| ||||||||| || ||||  ||||||||||  |||||||||||||| ||   ||||||||||||| |||||||| |||||| ||    
T  25576592 taatgacgatcttctgacggaatcaagctattgatgatatcttcagttgatctcagcaacgttacccgcatatcgatccat-ggaacatgctgtgctccc 25576690  T
Q  147 aaaa 150  Q
    ||||    
T  25576691 aaaa 25576694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 126
Target Start/End: Original strand, 42323385 - 42323468
Alignment:
Q  43 tacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatcca 126  Q
    |||||||| ||||| |||  | ||||||||||||||||  ||||||||||  |||||||||||||| || | ||||||||||||    
T  42323385 tacctaatgacgatcttccagtggaatcaaacttttgatgatatcttcagttgatctcagcaacgtcaccagcatatcgatcca 42323468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 150
Target Start/End: Original strand, 48087552 - 48087655
Alignment:
Q  47 taatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgctgcc 146  Q
    |||| ||||| |||||| |||||||| || ||||  ||||||||||  |||||||||||||| ||   ||||||||||||  |||| |||||||||| ||    
T  48087552 taatgacgatcttctggtggaatcaagctgttgatgatatcttcagttgatctcagcaacgttacccgcatatcgatccactggaatatgttgtgctccc 48087651  T
Q  147 aaaa 150  Q
    ||||    
T  48087652 aaaa 48087655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 44 - 143
Target Start/End: Complemental strand, 49273621 - 49273522
Alignment:
Q  44 acctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgct 143  Q
    ||||||| ||||| ||||||  |||||||||||||||  |||| |||||  |||||||||||||| ||  |||||| |||| |  |||||||||||||||    
T  49273621 acctaatgacgatattctggaagaatcaaacttttgatgatatattcagttgatctcagcaacgtcacccacatattgatcaactggaacatgttgtgct 49273522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 129 - 179
Target Start/End: Original strand, 20409848 - 20409898
Alignment:
Q  129 ggaacatgttgtgctgccaaaaaatcgagaacatgctcctcacatcgtcgt 179  Q
    ||||||||||||| || | ||| ||||||||||||||||||||||||||||    
T  20409848 ggaacatgttgtgttgaccaaatatcgagaacatgctcctcacatcgtcgt 20409898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 42 - 104
Target Start/End: Original strand, 33449146 - 33449208
Alignment:
Q  42 ctacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagca 104  Q
    ||||||||| ||||| |||||||||||||||||||| ||  ||||||||||  ||||||||||    
T  33449146 ctacctaattacgatcttctggcggaatcaaactttggatgatatcttcagttgatctcagca 33449208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 46 - 150
Target Start/End: Original strand, 3495028 - 3495132
Alignment:
Q  46 ctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgctgc 145  Q
    ||||| ||||| ||||||| |||||||||||||||  ||||||| ||  ||||| | |||| | ||   ||||||||||||  ||||||||||||||| |    
T  3495028 ctaatgacgatcttctggcagaatcaaacttttgatgatatcttaagttgatctaaacaacttcacccgcatatcgatccactggaacatgttgtgctcc 3495127  T
Q  146 caaaa 150  Q
    |||||    
T  3495128 caaaa 3495132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 150
Target Start/End: Complemental strand, 6754428 - 6754320
Alignment:
Q  42 ctacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtg 141  Q
    |||| |||||||||| |||| || |||||| ||| |||| |||||||||||  |||||||||||||| ||   |||||||||| |   |||||||||||     
T  6754428 ctacataatcacgatcttctagcagaatcagactgttgataatatcttcagttgatctcagcaacgttacccgcatatcgatcaactagaacatgttgta 6754329  T
Q  142 ctgccaaaa 150  Q
    || ||||||    
T  6754328 ctcccaaaa 6754320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 46 - 150
Target Start/End: Complemental strand, 47065907 - 47065803
Alignment:
Q  46 ctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgctgc 145  Q
    ||||| ||||| |||||||||||||||  | || |  ||||||||||  |||||||||||||| ||   ||||||||||||   |||||||||||||| |    
T  47065907 ctaatgacgatcttctggcggaatcaagttgttaatgatatcttcagttgatctcagcaacgttacccgcatatcgatccactagaacatgttgtgctcc 47065808  T
Q  146 caaaa 150  Q
    |||||    
T  47065807 caaaa 47065803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 150
Target Start/End: Original strand, 51695617 - 51695709
Alignment:
Q  58 ttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgctgccaaaa 150  Q
    |||||||||||||||  | ||||  ||||||||||  |||||||||||||| ||   ||||||||||||  |||||||| |||||| ||||||    
T  51695617 ttctggcggaatcaagttgttgatgatatcttcagttgatctcagcaacgtcacccgcatatcgatccactggaacatgatgtgctcccaaaa 51695709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 107
Target Start/End: Original strand, 29634931 - 29634969
Alignment:
Q  69 tcaaacttttgagaatatcttcagacgatctcagcaacg 107  Q
    ||||||| |||||||||||||||| ||||||||||||||    
T  29634931 tcaaactcttgagaatatcttcaggcgatctcagcaacg 29634969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 105
Target Start/End: Original strand, 1638569 - 1638666
Alignment:
Q  8 tccaagaatataaagacactacataataatgatgctacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaa 105  Q
    ||||| || ||||||||||||| ||||||| ||||||||||| ||  || || |||| ||| |||||| || ||||||||| |||  ||||| |||||    
T  1638569 tccaacaaaataaagacactacgtaataataatgctacctaaacataattttatggcagaaacaaactcttaagaatatctccaggtgatctgagcaa 1638666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 106
Target Start/End: Complemental strand, 36135215 - 36135167
Alignment:
Q  58 ttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaac 106  Q
    |||||||||||||||||||||||  ||||||||||  ||||| ||||||    
T  36135215 ttctggcggaatcaaacttttgatgatatcttcagttgatctaagcaac 36135167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 150
Target Start/End: Complemental strand, 49610709 - 49610605
Alignment:
Q  46 ctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgctgc 145  Q
    ||||| ||||| |||||||||||||||  | ||||  ||||||||||  |||||||||||||| ||   |||||||| |||  |||||||  |||||| |    
T  49610709 ctaatgacgatcttctggcggaatcaagttgttgatgatatcttcagttgatctcagcaacgtcacccgcatatcgacccactggaacatactgtgctcc 49610610  T
Q  146 caaaa 150  Q
    |||||    
T  49610609 caaaa 49610605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 76; Significance: 3e-35; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 8 - 182
Target Start/End: Complemental strand, 26140398 - 26140223
Alignment:
Q  8 tccaagaatataaagacactacataataatgatgctacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacg 107  Q
    ||||| || ||||| ||| ||||||||||||||||||||||| ||  || || ||   |||||||||| || ||||||||||||| |||||||| |||||    
T  26140398 tccaacaaaataaatacaatacataataatgatgctacctaaacataattttttgaaagaatcaaactcttaagaatatcttcaggcgatctcaacaacg 26140299  T
Q  108 tgacaaacatatcgatccataggaacatgttgtgctgcc-aaaaaatcgagaacatgctcctcacatcgtcgtcgt 182  Q
    | ||| |||||||||||||| |||||||||||||| ||| ||||||||||||||||||| ||||| | ||||||||    
T  26140298 taacatacatatcgatccatgggaacatgttgtgcagccaaaaaaatcgagaacatgcttctcacgttgtcgtcgt 26140223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 8 - 106
Target Start/End: Original strand, 24629888 - 24629986
Alignment:
Q  8 tccaagaatataaagacactacataataatgatgctacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaac 106  Q
    ||||| || ||||||||||||||||||||||||||||||||| ||  || || |||| |||||||||| |||||||||||||||| |||||||||||||    
T  24629888 tccaacaaaataaagacactacataataatgatgctacctaaacataatcttgtggcagaatcaaactcttgagaatatcttcaggcgatctcagcaac 24629986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 43 - 150
Target Start/End: Original strand, 41856969 - 41857076
Alignment:
Q  43 tacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgc 142  Q
    |||||||| ||||| |||||||||||||||||||||||  ||||||||||  |||||||||||||| ||   ||||||||||||  ||||||||||||||    
T  41856969 tacctaatgacgatcttctggcggaatcaaacttttgatgatatcttcagttgatctcagcaacgtcacccgcatatcgatccactggaacatgttgtgc 41857068  T
Q  143 tgccaaaa 150  Q
    | ||||||    
T  41857069 tcccaaaa 41857076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 43 - 150
Target Start/End: Original strand, 44943076 - 44943183
Alignment:
Q  43 tacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgc 142  Q
    |||||||| || || |||||||||||||||||||||||  ||||||||||  |||||||||||||| ||   ||||||||||||  ||||||||||||||    
T  44943076 tacctaatgacaatcttctggcggaatcaaacttttgatgatatcttcagttgatctcagcaacgtcacccgcatatcgatccactggaacatgttgtgc 44943175  T
Q  143 tgccaaaa 150  Q
    | ||||||    
T  44943176 tcccaaaa 44943183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 43 - 143
Target Start/End: Original strand, 31171811 - 31171911
Alignment:
Q  43 tacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgc 142  Q
    |||||||||||||| |||||||||||||||||| |||| ||||| |||||  |||||||||||||| ||  |||||||||||||  | |||||| |||||    
T  31171811 tacctaatcacgatcttctggcggaatcaaactgttgataatattttcagttgatctcagcaacgtcacccacatatcgatccacggtaacatgctgtgc 31171910  T
Q  143 t 143  Q
    |    
T  31171911 t 31171911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 42 - 150
Target Start/End: Original strand, 3589260 - 3589368
Alignment:
Q  42 ctacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtg 141  Q
    ||||||||||||||| |||||||||||||||||| |||| ||| |||||||  ||||||| ||| || |||  ||||||||||||  |||||||  ||||    
T  3589260 ctacctaatcacgatcttctggcggaatcaaactgttgataatgtcttcagttgatctcaacaatgttacacgcatatcgatccactggaacatcctgtg 3589359  T
Q  142 ctgccaaaa 150  Q
    || ||||||    
T  3589360 ctcccaaaa 3589368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 8 - 108
Target Start/End: Complemental strand, 10204819 - 10204720
Alignment:
Q  8 tccaagaatataaagacactacataataatgatgctacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacg 107  Q
    ||||| || ||||||||||||||| ||||||||||||||||| ||  || || |||| |||||||| | || ||||||||||||| ||||||||||||||    
T  10204819 tccaacaaaataaagacactacatcataatgatgctacctaaacataat-ttttggcagaatcaaattgtttagaatatcttcaggcgatctcagcaacg 10204721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 46 - 150
Target Start/End: Original strand, 15032322 - 15032426
Alignment:
Q  46 ctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgctgc 145  Q
    ||||| ||||| |||||||||||||||||||||||  ||||||||||  ||||| |||||| | ||   ||||||||||||  ||||||||||||||| |    
T  15032322 ctaatgacgatcttctggcggaatcaaacttttgatgatatcttcagttgatctaagcaacttcacccgcatatcgatccactggaacatgttgtgctcc 15032421  T
Q  146 caaaa 150  Q
    |||||    
T  15032422 caaaa 15032426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 129 - 182
Target Start/End: Original strand, 12785267 - 12785320
Alignment:
Q  129 ggaacatgttgtgctgccaaaaaatcgagaacatgctcctcacatcgtcgtcgt 182  Q
    |||||||||||||||| | |||||||||||||||||||||||| ||||||||||    
T  12785267 ggaacatgttgtgctgaccaaaaatcgagaacatgctcctcacgtcgtcgtcgt 12785320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 8 - 108
Target Start/End: Complemental strand, 27783694 - 27783594
Alignment:
Q  8 tccaagaatataaagacactacataataatgatgctacctaatcacgatgttctggcggaatcaaact-tttgagaatatcttcagacgatctcagcaac 106  Q
    ||||| || ||||||||||||||||||||||||||||||||| ||  || || || | |||||||||| ||  ||||||||||||| |||||||||||||    
T  27783694 tccaacaaaataaagacactacataataatgatgctacctaaacataatcttgtgacagaatcaaactcttaaagaatatcttcag-cgatctcagcaac 27783596  T
Q  107 gt 108  Q
    ||    
T  27783595 gt 27783594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 46 - 143
Target Start/End: Complemental strand, 41275610 - 41275513
Alignment:
Q  46 ctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgct 143  Q
    ||||| ||||| |||||||||||||||  | ||||  ||||||||||  |||||||||||||| ||   ||||||||||||| |||||||||||||||    
T  41275610 ctaatgacgatcttctggcggaatcaagttgttgatgatatcttcagttgatctcagcaacgtcacccgcatatcgatccattggaacatgttgtgct 41275513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 43 - 143
Target Start/End: Original strand, 18440290 - 18440390
Alignment:
Q  43 tacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgc 142  Q
    |||||||| ||||| |||| ||| ||||||||||||||  ||||||||||   ||||||||||||| ||   ||||||||||||  ||||||||||||||    
T  18440290 tacctaatgacgatcttctcgcgtaatcaaacttttgatgatatcttcagtttatctcagcaacgtcaccctcatatcgatccactggaacatgttgtgc 18440389  T
Q  143 t 143  Q
    |    
T  18440390 t 18440390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 66 - 186
Target Start/End: Original strand, 32108919 - 32109039
Alignment:
Q  66 gaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgctgccaaaaaatcgagaacatgct 165  Q
    |||||||||| ||| ||||||||||||| |||||||||||||  |||  ||  ||||||     |||||||  |||||| | ||| ||||||||||||||    
T  32108919 gaatcaaactcttgcgaatatcttcagaagatctcagcaacgaaacatccaactcgatcgtcgagaacatgccgtgctgaccaaatatcgagaacatgct 32109018  T
Q  166 cctcacatcgtcgtcgttctt 186  Q
    |||||| ||||||||||||||    
T  32109019 cctcacgtcgtcgtcgttctt 32109039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 46 - 150
Target Start/End: Original strand, 42168958 - 42169062
Alignment:
Q  46 ctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgctgc 145  Q
    ||||| ||||| ||||||||||||||| || ||||  ||||||||||  |||||| ||||||| ||   ||||||||||||  ||||||||||||||| |    
T  42168958 ctaatgacgatcttctggcggaatcaagctgttgatgatatcttcagttgatctctgcaacgttacccgcatatcgatccactggaacatgttgtgctcc 42169057  T
Q  146 caaaa 150  Q
    |||||    
T  42169058 caaaa 42169062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 61 - 136
Target Start/End: Original strand, 12504755 - 12504830
Alignment:
Q  61 tggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatg 136  Q
    |||| |||||||||  ||||||||||||| || |||||| |||||||| ||| ||||||||||||| |||||||||    
T  12504755 tggcagaatcaaacgcttgagaatatctttaggcgatcttagcaacgtaacatacatatcgatccacaggaacatg 12504830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 46 - 150
Target Start/End: Complemental strand, 26452541 - 26452437
Alignment:
Q  46 ctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgctgc 145  Q
    ||||| ||||| |||| ||||||||||  | ||||  ||||||||||  |||||||||||||| ||   ||||||||||||  ||||||||||||||| |    
T  26452541 ctaatgacgatcttctagcggaatcaagttgttgatgatatcttcagttgatctcagcaacgtcacccgcatatcgatccactggaacatgttgtgctcc 26452442  T
Q  146 caaaa 150  Q
    |||||    
T  26452441 caaaa 26452437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 46 - 150
Target Start/End: Original strand, 33799549 - 33799653
Alignment:
Q  46 ctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgctgc 145  Q
    ||||| ||||| |||||||||||||||  | ||||  ||||||||||  |||||||||||||| |    ||||||||||||  ||||||||||||||| |    
T  33799549 ctaatgacgatcttctggcggaatcaagttgttgatgatatcttcagttgatctcagcaacgttatccgcatatcgatccactggaacatgttgtgctcc 33799648  T
Q  146 caaaa 150  Q
    |||||    
T  33799649 caaaa 33799653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 46 - 150
Target Start/End: Original strand, 38033923 - 38034027
Alignment:
Q  46 ctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgctgc 145  Q
    ||||| ||||| ||| ||||||||||| || ||||  ||||||||||  |||||||||||||| ||   ||||||||||||   |||||||||||||| |    
T  38033923 ctaatgacgatcttccggcggaatcaagctattgatgatatcttcagttgatctcagcaacgttacccgcatatcgatccactagaacatgttgtgctcc 38034022  T
Q  146 caaaa 150  Q
    |||||    
T  38034023 caaaa 38034027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 46 - 150
Target Start/End: Complemental strand, 41363872 - 41363768
Alignment:
Q  46 ctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgctgc 145  Q
    ||||| ||||| |||||| ||||||||  | ||||  ||||||||||  |||||||||||||| ||   ||||||||||||  ||||||||||||||| |    
T  41363872 ctaatgacgatcttctggaggaatcaagttgttgatgatatcttcagttgatctcagcaacgtaacccgcatatcgatccactggaacatgttgtgctcc 41363773  T
Q  146 caaaa 150  Q
    |||||    
T  41363772 caaaa 41363768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 46 - 150
Target Start/End: Complemental strand, 43693353 - 43693249
Alignment:
Q  46 ctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgctgc 145  Q
    ||||| ||||| |||||| ||||||||  | ||||  ||||||||||  |||||||||||||| ||   ||||||||||||  ||||||||||||||| |    
T  43693353 ctaatgacgatcttctggaggaatcaagttgttgatgatatcttcagttgatctcagcaacgtcacccgcatatcgatccactggaacatgttgtgctcc 43693254  T
Q  146 caaaa 150  Q
    |||||    
T  43693253 caaaa 43693249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 150
Target Start/End: Complemental strand, 42603673 - 42603566
Alignment:
Q  43 tacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgc 142  Q
    |||||||| ||||| || ||||||||||||||||||||  |||| ||| |  ||| |||||||||| ||   ||||||||||||  |||||||| |||||    
T  42603673 tacctaatgacgatcttttggcggaatcaaacttttgatgatatattcggttgatttcagcaacgtcacccgcatatcgatccactggaacatgatgtgc 42603574  T
Q  143 tgccaaaa 150  Q
    | ||||||    
T  42603573 tcccaaaa 42603566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 46 - 150
Target Start/End: Complemental strand, 40415473 - 40415369
Alignment:
Q  46 ctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgctgc 145  Q
    ||||| ||||| ||||| ||||||||| || ||||  ||||||| ||  ||||||| |||||| ||   ||||||||||||  ||||||||||||||| |    
T  40415473 ctaatgacgatcttctgacggaatcaagctgttgatgatatcttaagttgatctcaacaacgtcacctgcatatcgatccacgggaacatgttgtgctcc 40415374  T
Q  146 caaaa 150  Q
    |||||    
T  40415373 caaaa 40415369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 46 - 150
Target Start/End: Original strand, 43638675 - 43638779
Alignment:
Q  46 ctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgctgc 145  Q
    ||||| ||||| |||||||| ||||||  | ||||  ||||||||||  |||||||||||||| ||   ||||||||| ||  ||||||||||||||| |    
T  43638675 ctaatgacgatcttctggcgaaatcaagttgttgatgatatcttcagttgatctcagcaacgttacgcgcatatcgatgcactggaacatgttgtgctcc 43638774  T
Q  146 caaaa 150  Q
    |||||    
T  43638775 caaaa 43638779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 140
Target Start/End: Original strand, 19242180 - 19242254
Alignment:
Q  66 gaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgt 140  Q
    |||||||||||||||  ||||||||||  ||||| |||||||| ||   ||||||||||||  ||||||||||||    
T  19242180 gaatcaaacttttgatgatatcttcagttgatcttagcaacgtcacccgcatatcgatccactggaacatgttgt 19242254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 140
Target Start/End: Original strand, 19315364 - 19315438
Alignment:
Q  66 gaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgt 140  Q
    |||||||||||||||  ||||||||||  ||||| |||||||| ||   ||||||||||||  ||||||||||||    
T  19315364 gaatcaaacttttgatgatatcttcagttgatcttagcaacgtcacccgcatatcgatccactggaacatgttgt 19315438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 189
Target Start/End: Original strand, 22843397 - 22843455
Alignment:
Q  131 aacatgttgtgctgccaaaaaatcgagaacatgctcctcacatcgtcgtcgttctttaa 189  Q
    |||||||||||||| | ||| |||||||||||||||||||  |||||||| ||| ||||    
T  22843397 aacatgttgtgctgaccaaacatcgagaacatgctcctcaagtcgtcgtccttcgttaa 22843455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 61 - 138
Target Start/End: Complemental strand, 40702561 - 40702484
Alignment:
Q  61 tggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgtt 138  Q
    ||||||||||||||||||||  |||| |||||  |||||||||||||| |    ||||||||||||  ||||||||||    
T  40702561 tggcggaatcaaacttttgatgatatattcagttgatctcagcaacgtcatccgcatatcgatccactggaacatgtt 40702484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 106
Target Start/End: Original strand, 485256 - 485316
Alignment:
Q  46 ctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaac 106  Q
    ||||| ||||| || ||||||||||||||||||||  ||||||||||  ||||| ||||||    
T  485256 ctaatgacgatcttgtggcggaatcaaacttttgatgatatcttcagttgatctaagcaac 485316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 150
Target Start/End: Original strand, 28706152 - 28706244
Alignment:
Q  58 ttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgctgccaaaa 150  Q
    ||||||||||||||| |  ||||  ||||||||||  ||||||| |||||| |||  ||||||||||||    ||||||||||||| ||||||    
T  28706152 ttctggcggaatcaagcggttgatgatatcttcagttgatctcaacaacgttacacgcatatcgatccactaaaacatgttgtgctcccaaaa 28706244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 150
Target Start/End: Complemental strand, 40414826 - 40414722
Alignment:
Q  46 ctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgctgc 145  Q
    ||||| ||||| |||||| |||||||| || ||||  ||||||||||  |||||||||||||| ||   |||||| ||| |  | ||||||||||||| |    
T  40414826 ctaatgacgatcttctggtggaatcaagctgttgatgatatcttcagttgatctcagcaacgtcacccgcatatcaatcaactgaaacatgttgtgctcc 40414727  T
Q  146 caaaa 150  Q
    |||||    
T  40414726 caaaa 40414722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 45; Significance: 8e-17; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 46 - 150
Target Start/End: Complemental strand, 1998 - 1894
Alignment:
Q  46 ctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgctgc 145  Q
    ||||| ||||| || ||||| ||||||||||||||  ||||||||||  |||||||||||||| ||   ||||||||||||  ||||||||||||||| |    
T  1998 ctaatgacgatcttatggcgaaatcaaacttttgatgatatcttcagttgatctcagcaacgtcacccgcatatcgatccactggaacatgttgtgctcc 1899  T
Q  146 caaaa 150  Q
    |||||    
T  1898 caaaa 1894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 46 - 150
Target Start/End: Original strand, 17916 - 18020
Alignment:
Q  46 ctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgctgc 145  Q
    ||||| ||||| ||||||||||||||| || ||||  ||||||||||  |||||||||||||| ||   ||||||||||||    ||||||||||||| |    
T  17916 ctaatgacgatcttctggcggaatcaagctgttgatgatatcttcagttgatctcagcaacgttacccgcatatcgatccactataacatgttgtgctcc 18015  T
Q  146 caaaa 150  Q
    |||||    
T  18016 caaaa 18020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 42 - 105
Target Start/End: Complemental strand, 64161 - 64098
Alignment:
Q  42 ctacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaa 105  Q
    ||||||||| ||||| |||||| ||||||||||||||||  ||||||||||  |||||||||||    
T  64161 ctacctaatgacgatcttctggtggaatcaaacttttgatgatatcttcagttgatctcagcaa 64098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0589 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0589
Description:

Target: scaffold0589; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 46 - 150
Target Start/End: Complemental strand, 2475 - 2371
Alignment:
Q  46 ctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccataggaacatgttgtgctgc 145  Q
    ||||| ||||| || |||||||||||| || ||||  |||||||||   ||||||| |||||| ||   ||||||||||||  ||||||||||||||| |    
T  2475 ctaatgacgatcttttggcggaatcaagctgttgatgatatcttcaattgatctcatcaacgttacccgcatatcgatccactggaacatgttgtgctcc 2376  T
Q  146 caaaa 150  Q
    |||||    
T  2375 caaaa 2371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 66 - 103
Target Start/End: Complemental strand, 1213 - 1176
Alignment:
Q  66 gaatcaaacttttgagaatatcttcagacgatctcagc 103  Q
    |||||||||| ||||||||||||||||| |||||||||    
T  1213 gaatcaaactcttgagaatatcttcagaagatctcagc 1176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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