View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16025_high_8 (Length: 267)
Name: NF16025_high_8
Description: NF16025
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16025_high_8 |
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Alignment Details
Target: chr1 (Bit Score: 221; Significance: 1e-121; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 19 - 255
Target Start/End: Complemental strand, 6998775 - 6998540
Alignment:
| Q |
19 |
tattaatcatctaatttacacaattaacaaattatttaaattgtgttaaccactgaaaagttatcgcaaatgatatctaactttagttgtacaaataatt |
118 |
Q |
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| T |
6998775 |
tattaatcatctaatttacacaattaacaaattatttaaattgtgttaaccactgaaaagttatcgcaaatgatatctaactttagttgtacaaataatt |
6998676 |
T |
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| Q |
119 |
tctcttatctatttatcgttatctttctctactcttgaattttctcacaaaagaaacacattcttttgataaattggcacaaaaaggcaaaaataaaggg |
218 |
Q |
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| T |
6998675 |
tctcttatctatttatcgttatctttctctactcttgaattttctcac-aaagaaacacattattttgataaattggcacaaaaaggcaaaaataaaggg |
6998577 |
T |
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| Q |
219 |
gagggagttgctatcagtacacgttggattgtgagaa |
255 |
Q |
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| T |
6998576 |
gagggagttgctatcagtccacgttggattgtgagaa |
6998540 |
T |
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