View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16029_low_14 (Length: 301)
Name: NF16029_low_14
Description: NF16029
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16029_low_14 |
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Alignment Details
Target: chr4 (Bit Score: 267; Significance: 1e-149; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 14 - 280
Target Start/End: Original strand, 31408767 - 31409033
Alignment:
| Q |
14 |
cagaaccagcaccaacgatgacgacgtcggtatcggcatgagtcaccatgtccgtcatgtacctacgagtcatctcacgtgccacaattgactccttgat |
113 |
Q |
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| T |
31408767 |
cagaaccagcaccaacgatgacgacgtcggtatcggcatgagtcaccatgtccgtcatgtacctacgagtcatctcacgtgccacaattgactccttgat |
31408866 |
T |
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| Q |
114 |
cggagcaaatttgaaggcgttgagatcataggagggtggtggtgaaggtgcagctgatgcagaaacggagatggagtgtcttggtttgaaaccgaggctt |
213 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31408867 |
cggagcaaatttgaaggcgttgagatcataggagggtggtggtgaaggtgcagctgatgcagaaacggagatggagtgtcttggtttgaaaccgaggctt |
31408966 |
T |
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| Q |
214 |
agggtttggttgaatgaggaaggtttctctgtgagagaagaaggggttgagaggaaggaggaggtaa |
280 |
Q |
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| T |
31408967 |
agggtttggttgaatgaggaaggtttctctgtgagagaagaaggggttgagaggaaggaggaggtaa |
31409033 |
T |
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